Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0001853

Physical Location & Seq

Genomic Coordinates Forward (+)

14210108 .. 14221126

Gene Structure 11019 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00344220.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2127 bp

ATGTCAGAGGATTTCCAGGAGGAACCTGCACATGAAGTAGAAGGGCCATTTGAAAGCAGGCTGCAGACATCTCATCCATTACCAGAAGGCCTGGGAGCACAAGTGATAGCTCTCTTCACAAGTACTTTTCGCGGACCAAAGGAGATAGATAATAAAATTCCACCAAAAGTACAAGCAACAACAACACCTGCTAAATGGGCTCAGAGTGCTCCAACTCAAGAGCGTACAAATATATCTGGCGATGTACGAAGAAAAGATCAGAAGGATGTTACACATACTCCAGAAAACAATGCCACAGCAACACCAACTATCATAAACACCAACCTAGTTCCATACGTGACACTACATCTTGCTGCTCTGAATGGTGACTGGATGACTGCTAGAAATTTCTTGCAATTACAGCCAGAAGCTGTGAGGGCTAAGATCACAAAGGGTTCAGAAACTGCTCTTCACATTGCAGCTGGGGCAAAACGTACACTTTTTGTTGAGGAGCTAGTAAAATGGATGACACCAAATGACCTTGAATTGAAGAATGATGTAGGAAACACCGCCCTTTATTTTGCTGCTGTATCTGGTATCAAAAGGATTGCTGAGGTAATGGTGGATATTAACCCAAGATTACCTCAGATCCGAGGTACTAAAGATCTAACACCTCTTCATATGGCTACATTGCTAGGCCACAAAGAAATTGTATGGTATCTATACGATAAGACAATTTTGACAGAACAAGATTACATAGGGCTTCTTATTTCTGCCATAACAGCAGATCTTTATGATGTAGCACTGGATATAATTCAAAAGCACCCTGAAATGGCTTTTGCTCGAGATAGAAATGGAGAGACAGCACTACATGTATTGGCTCGAAAGCCTTCAGCATGTTATAGTGGAAGTCAGCTGGGATCTTTGCAACGATGGATAACTTCATATGTGGCTATGGATATAGTTGAACAACACCCTGAAATGACTTCTGTTCAAGATGAAATTGTGGAGACTACACTCCAAATAGTGGAGCCTTCGGCATGTTATAGTGGAAATCAGCTGGGACTTTGGAAACGATTGATATTATCTGTCCCCAATATCCAGGTCTCATACGACAAAAAGTTGAATCATATGCAAGCAACTGAACTTGTGAAGCTGCTTTGGAAAAAAGTTTTGACACTAGGGAGTGATTTGGGGATAAATGATTTGATCAATGTACCCTCTCGCTTATTGTTTACTGCTGCTGAATTGGGGAATATAGAGTTTCTCATTATACTTATTAGATTGTACCCCAGTCTCATTTGGCAAGTTGATGAACAAAACCAAAGCATATTTCATACCGCATTGATTCATCGACAGGAAAAAGTTTTCAATCTCATTTATGAATTAGGCGGTCTGAAAGACTTAATAGCCTCTTATAAAGATGTAAACAACAATAACATGCTTCATTTGGCTGCACGAGCATCTCCAAATCGACTAAGTATTGATACAGGGGCAGCATTGAAATTGCGAAGAGAGTTGACTTGGTTTAAGGAGGTGGAGAAGATTGTCCAGCCATTATACAAAGAAATGAGGAACTCAGATGGAGAAACACCTCAACTTCTTTTCTCCAAGGAACACAAGGAACTACTACGACAAGGAGAAGAGTGGATGAAGGGCACTGCATCATCATGCATGGTTGTGGCAACTCTTATTGCCACTGTAATGTTTTCTGTCTTCTCCACTGTCCCCGGTGGCAACAACAATAACACAGGCATTCCCATATTCCTTAAATCAAGGGCCTTCACGGTTTTTGTCATATCAGATTCAATATCCCTCATCTCATCGACCACTTCAATCTTGAGTTTTCTGTCCATTCTAACATCACGCTACACTGAAGGAGATTTTCTAAATTCATTACCGAATAGATTGATCGTGGGGCTTGCTACCTTATTTATCTCTATGGCTACAATGATGATGACATTTGTTGCCACACTTCTTATGGTTCTTGGCCCTGGATTTCATGAGATAAAACTTCCAGTTGCTTTGATTGCTGCAGTTCCAGTTGGTTTCTACGCGTTACTACAGTTTCCTCTTCTAGCAGATATGATCTGTCATGCTTATATCTCAAGAGTTTCTTTTCGTCCATGCAACCACCTCTTGCACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ank_2 PGG

Protein Analysis

708

Amino Acids

79.03

Weight (kDa)

6.36

Isoelectric Point (pI)

39.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ank_2	PF12796	115 - 202	5.4e-07	Ankyrin repeats (3 copies)
Ank_2	PF12796	164 - 238	3.9e-08	Ankyrin repeats (3 copies)
PGG	PF13962	541 - 654	9.4e-25	Domain of unknown function

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001853)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G35810
fragaria_vesca	FvH4_1g20460 FvH4_4g07110 FvH4_4g07110 FvH4_4g07110
malus_domestica	MD05G1166100.v1.1
prunus_persica	Prupe.1G545900_v2.0.a1 Prupe.1G545900_v2.0.a1
pyrus_communis	pycom05g15470 pycom05g15480
rosa_chinensis	RchiOBHm_Chr2g0112741 RchiOBHm_Chr4g0399281 RchiOBHm_Chr5g0059341 RchiOBHm_Chr5g0059351
rosa_laevigata	RLG00000009279 RLG00000018005
rosa_multiflora	Rmu_co8188422.1_g000001 Rmu_co8394355.1_g000001 Rmu_sc0000375.1_g000019 Rmu_sc0000375.1_g000021 Rmu_sc0003135.1_g000013 Rmu_sc0035003.1_g000001 Rmu_sc0042317.1_g000002
rosa_roxburghii	Rroxscaffold_2G00131190 Rroxscaffold_2G00131200 Rroxscaffold_5G00344220
rosa_rugosa	Rorug02G0182000 Rorug04G0016000 Rorug04G0016100 Rorug04G0016200
rosa_samantha	Rh2AG236700 Rh2BG249500 Rh2BG249600 Rh2CG240700 Rh2DG244100 Rh2DG244200 Rh4AG093900 Rh4BG091300 Rh4CG102100 Rh4DG086000 Rh5AG386900 Rh5DG414600 Rh7DG334500
rosa_wichuraiana	Rw2G018300 Rw4G007700 Rw5G036400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1398
AarI	CACCTGC	1 cut(s)	196
Acc36I	ACCTGC	2 cut(s)	34, 196
AccB7I	CCANNNNNTGG	1 cut(s)	1006
AccII	CGCG	2 cut(s)	132, 2036
AciI	CCGC	4 cut(s)	132, 549, 1320, 1371
AclWI	GGATC	2 cut(s)	622, 907
AcsI	RAATTY	3 cut(s)	156, 385, 1870
AcuI	CTGAAG	2 cut(s)	855, 1875
AfaI	GTAC	8 cut(s)	124, 171, 226, 246, 475, 637, 1197, 1268
AfiI	CCNNNNNNNGG	2 cut(s)	811, 1006
AflIII	ACRYGT	2 cut(s)	850, 2034
AjnI	CCWGG	4 cut(s)	15, 90, 1080, 1972
AjuI	GAANNNNNNNTTGG	2 cut(s)	1296, 1328
AluBI	AGCT	7 cut(s)	110, 410, 461, 493, 895, 1039, 1135
AluI	AGCT	7 cut(s)	110, 410, 461, 493, 895, 1039, 1135
Alw21I	GWGCWC	2 cut(s)	100, 211
Alw26I	GTCTC	4 cut(s)	833, 983, 1090, 1280
AlwI	GGATC	2 cut(s)	622, 907
AlwNI	CAGNNNCTG	2 cut(s)	410, 443
Ama87I	CYCGRG	1 cut(s)	822
AoxI	GGCC	5 cut(s)	44, 88, 676, 1758, 1969
ApeKI	GCWGC	9 cut(s)	61, 353, 458, 563, 1135, 1220, 1433, 1475, 2012
ApoI	RAATTY	3 cut(s)	156, 385, 1870
Asp700I	GAANNNNTTC	1 cut(s)	868
AspS9I	GGNCC	4 cut(s)	44, 134, 1758, 1970
AsuC2I	CCSGG	1 cut(s)	1710
AsuHPI	GGTGA	1 cut(s)	377
AvaI	CYCGRG	1 cut(s)	822
AvaII	GGWCC	1 cut(s)	134
BaeGI	GKGCMC	1 cut(s)	1640
BanII	GRGCYC	1 cut(s)	202
BauI	CACGAG	1 cut(s)	1437
BbsI	GAAGAC	1 cut(s)	1687
Bbv12I	GWGCWC	2 cut(s)	100, 211
BbvCI	CCTCAGC	1 cut(s)	591
BbvI	GCAGC	9 cut(s)	48, 340, 470, 550, 1122, 1207, 1420, 1487, 1999
BccI	CCATC	2 cut(s)	906, 1556
BciT130I	CCWGG	4 cut(s)	17, 92, 1082, 1974
BclI	TGATCA	1 cut(s)	1188
BcnI	CCSGG	1 cut(s)	1710
BcoDI	GTCTC	4 cut(s)	833, 983, 1090, 1280
BfaI	CTAG	7 cut(s)	326, 381, 494, 674, 1160, 2057, 2125
BfmI	CTRYAG	3 cut(s)	62, 2013, 2042
BfuAI	ACCTGC	2 cut(s)	34, 196
BglII	AGATCT	2 cut(s)	643, 766
BisI	GCNGC	9 cut(s)	62, 354, 459, 564, 1136, 1221, 1434, 1476, 2013
BlsI	GCNGC	9 cut(s)	63, 355, 460, 565, 1137, 1222, 1435, 1477, 2014
BmcAI	AGTACT	1 cut(s)	124
Bme1390I	CCNGG	5 cut(s)	17, 92, 1082, 1710, 1974
Bme18I	GGWCC	1 cut(s)	134
BmeT110I	CYCGRG	1 cut(s)	822
BmgT120I	GGNCC	4 cut(s)	44, 134, 1758, 1970
BmiI	GGNNCC	2 cut(s)	24, 1011
BmrFI	CCNGG	5 cut(s)	17, 92, 1082, 1710, 1974
BmrI	ACTGGG	1 cut(s)	1266
BmsI	GCATC	2 cut(s)	1451, 1652
BmuI	ACTGGG	1 cut(s)	1266
BpiI	GAAGAC	1 cut(s)	1687
BpmI	CTGGAG	1 cut(s)	264
Bpu10I	CCTNAGC	1 cut(s)	591
BpuEI	CTTGAG	3 cut(s)	201, 1840, 2071
BpuMI	CCSGG	1 cut(s)	1710
BsaAI	YACGTR	1 cut(s)	337
BsaI	GGTCTC	1 cut(s)	1090
BsaJI	CCNNGG	5 cut(s)	91, 631, 1590, 1708, 1972
BsaXI	ACNNNNNCTCC	4 cut(s)	87, 117, 262, 292
Bsc4I	CCNNNNNNNGG	2 cut(s)	811, 1006
Bse1I	ACTGG	5 cut(s)	374, 789, 1272, 1997, 2021
Bse3DI	GCAATG	2 cut(s)	453, 668
BseBI	CCWGG	4 cut(s)	17, 92, 1082, 1974
BseDI	CCNNGG	5 cut(s)	91, 631, 1590, 1708, 1972
BseGI	GGATG	5 cut(s)	73, 271, 378, 510, 1635
BseLI	CCNNNNNNNGG	2 cut(s)	811, 1006
BseMI	GCAATG	2 cut(s)	453, 668
BseMII	CTCAG	4 cut(s)	215, 582, 638, 1572
BseNI	ACTGG	5 cut(s)	374, 789, 1272, 1997, 2021
BseRI	GAGGAG	1 cut(s)	503
BseSI	GKGCMC	1 cut(s)	1640
BseXI	GCAGC	9 cut(s)	48, 340, 470, 550, 1122, 1207, 1420, 1487, 1999
BseYI	CCCAGC	3 cut(s)	461, 895, 1039
BsgI	GTGCAG	2 cut(s)	12, 1419
Bsh1236I	CGCG	2 cut(s)	132, 2036
BshFI	GGCC	5 cut(s)	46, 90, 678, 1760, 1971
BsiHKAI	GWGCWC	2 cut(s)	100, 211
BsiHKCI	CYCGRG	1 cut(s)	822
BsiSI	CCGG	1 cut(s)	1710
BslFI	GGGAC	3 cut(s)	1055, 1056, 1691
BslI	CCNNNNNNNGG	2 cut(s)	811, 1006
BsmAI	GTCTC	4 cut(s)	833, 983, 1090, 1280
BsmFI	GGGAC	3 cut(s)	1055, 1056, 1691
BsmI	GAATGC	1 cut(s)	1734
BsnI	GGCC	5 cut(s)	46, 90, 678, 1760, 1971
Bso31I	GGTCTC	1 cut(s)	1090
BsoBI	CYCGRG	1 cut(s)	822
Bsp1286I	GDGCHC	4 cut(s)	100, 202, 211, 1640
Bsp143I	GATC	9 cut(s)	256, 423, 627, 643, 766, 899, 1188, 1890, 2067
BspACI	CCGC	4 cut(s)	132, 549, 1320, 1371
BspANI	GGCC	5 cut(s)	46, 90, 678, 1760, 1971
BspCNI	CTCAG	4 cut(s)	214, 583, 637, 1571
BspFNI	CGCG	2 cut(s)	132, 2036
BspHI	TCATGA	1 cut(s)	1981
BspLI	GGNNCC	2 cut(s)	24, 1011
BspMAI	CTGCAG	2 cut(s)	66, 2017
BspMI	ACCTGC	2 cut(s)	34, 196
BspPI	GGATC	2 cut(s)	622, 907
BspQI	GCTCTTC	1 cut(s)	453
BspTNI	GGTCTC	1 cut(s)	1090
BsrDI	GCAATG	2 cut(s)	453, 668
BsrI	ACTGG	5 cut(s)	374, 789, 1272, 1997, 2021
BssECI	CCNNGG	5 cut(s)	91, 631, 1590, 1708, 1972
BssMI	GATC	9 cut(s)	256, 423, 627, 643, 766, 899, 1188, 1890, 2067
BssSI	CACGAG	1 cut(s)	1437
BssT1I	CCWWGG	1 cut(s)	1590
Bst2BI	CACGAG	1 cut(s)	1437
Bst2UI	CCWGG	4 cut(s)	17, 92, 1082, 1974
Bst4CI	ACNGT	4 cut(s)	1681, 1705, 1768, 2046
Bst6I	CTCTTC	6 cut(s)	119, 453, 660, 1486, 1617, 2058
BstBAI	YACGTR	1 cut(s)	337
BstC8I	GCNNGC	3 cut(s)	59, 1116, 1902
BstDEI	CTNAG	6 cut(s)	201, 420, 591, 624, 1457, 1558
BstF5I	GGATG	5 cut(s)	73, 271, 378, 510, 1635
BstFNI	CGCG	2 cut(s)	132, 2036
BstKTI	GATC	9 cut(s)	259, 426, 630, 646, 769, 902, 1191, 1893, 2070
BstMAI	GTCTC	4 cut(s)	833, 983, 1090, 1280
BstMBI	GATC	9 cut(s)	256, 423, 627, 643, 766, 899, 1188, 1890, 2067
BstMWI	GCNNNNNNNGC	8 cut(s)	197, 206, 400, 416, 464, 761, 1439, 2009
BstNI	CCWGG	4 cut(s)	17, 92, 1082, 1974
BstNSI	RCATGY	4 cut(s)	854, 879, 1023, 1423
BstSCI	CCNGG	5 cut(s)	15, 90, 1080, 1708, 1972
BstSFI	CTRYAG	3 cut(s)	62, 2013, 2042
BstSLI	GKGCMC	1 cut(s)	1640
BstUI	CGCG	2 cut(s)	132, 2036
BstV1I	GCAGC	9 cut(s)	48, 340, 470, 550, 1122, 1207, 1420, 1487, 1999
BstV2I	GAAGAC	1 cut(s)	1687
BstX2I	RGATCY	4 cut(s)	627, 643, 766, 899
BstYI	RGATCY	4 cut(s)	627, 643, 766, 899
BsuRI	GGCC	5 cut(s)	46, 90, 678, 1760, 1971
BtgZI	GCGATG	1 cut(s)	255
BtsCI	GGATG	5 cut(s)	73, 271, 378, 510, 1635
BtsI	GCAGTG	1 cut(s)	1638
BtsIMutI	CAGTG	5 cut(s)	782, 1638, 1677, 1701, 1851
BveI	ACCTGC	2 cut(s)	34, 196
Cac8I	GCNNGC	3 cut(s)	59, 1116, 1902
CaiI	CAGNNNCTG	2 cut(s)	410, 443
CciI	TCATGA	1 cut(s)	1981
Cfr13I	GGNCC	4 cut(s)	44, 134, 1758, 1970
Csp6I	GTAC	8 cut(s)	123, 170, 225, 245, 474, 636, 1196, 1267
CviQI	GTAC	8 cut(s)	123, 170, 225, 245, 474, 636, 1196, 1267
DdeI	CTNAG	6 cut(s)	201, 420, 591, 624, 1457, 1558
DpnI	GATC	9 cut(s)	258, 425, 629, 645, 768, 901, 1190, 1892, 2069
DpnII	GATC	9 cut(s)	256, 423, 627, 643, 766, 899, 1188, 1890, 2067
Eam1104I	CTCTTC	6 cut(s)	119, 453, 660, 1486, 1617, 2058
EarI	CTCTTC	6 cut(s)	119, 453, 660, 1486, 1617, 2058
Eco130I	CCWWGG	1 cut(s)	1590
Eco147I	AGGCCT	1 cut(s)	90
Eco24I	GRGCYC	1 cut(s)	202
Eco31I	GGTCTC	1 cut(s)	1090
Eco47I	GGWCC	1 cut(s)	134
Eco57I	CTGAAG	2 cut(s)	855, 1875
Eco88I	CYCGRG	1 cut(s)	822
EcoO109I	RGGNCCY	1 cut(s)	1758
EcoRII	CCWGG	4 cut(s)	15, 90, 1080, 1972
EcoT14I	CCWWGG	1 cut(s)	1590
EcoT22I	ATGCAT	1 cut(s)	1655
EcoT38I	GRGCYC	1 cut(s)	202
ErhI	CCWWGG	1 cut(s)	1590
FalI	AAGNNNNNCTT	2 cut(s)	2080, 2112
FaqI	GGGAC	3 cut(s)	1055, 1056, 1691
FauNDI	CATATG	3 cut(s)	660, 925, 1110
FbaI	TGATCA	1 cut(s)	1188
Fnu4HI	GCNGC	9 cut(s)	62, 354, 459, 564, 1136, 1221, 1434, 1476, 2013
FokI	GGATG	5 cut(s)	60, 278, 385, 517, 1642
FriOI	GRGCYC	1 cut(s)	202
Fsp4HI	GCNGC	9 cut(s)	62, 354, 459, 564, 1136, 1221, 1434, 1476, 2013
FspBI	CTAG	7 cut(s)	326, 381, 494, 674, 1160, 2057, 2125
GluI	GCNGC	9 cut(s)	62, 354, 459, 564, 1136, 1221, 1434, 1476, 2013
GsaI	CCCAGC	3 cut(s)	465, 899, 1043
GsuI	CTGGAG	1 cut(s)	264
HaeIII	GGCC	5 cut(s)	46, 90, 678, 1760, 1971
HapII	CCGG	1 cut(s)	1710
HincII	GTYRAC	1 cut(s)	1500
HindII	GTYRAC	1 cut(s)	1500
HinfI	GANTC	3 cut(s)	1105, 1327, 1784
HpaII	CCGG	1 cut(s)	1710
HphI	GGTGA	1 cut(s)	377
Hpy166II	GTNNAC	4 cut(s)	476, 1215, 1408, 1500
Hpy188III	TCNNGA	7 cut(s)	218, 281, 824, 974, 1819, 1982, 2088
Hpy8I	GTNNAC	4 cut(s)	476, 1215, 1408, 1500
HpyAV	CCTTC	8 cut(s)	35, 80, 256, 879, 1023, 1627, 1771, 1850
HpyCH4III	ACNGT	4 cut(s)	1681, 1705, 1768, 2046
HpyCH4IV	ACGT	2 cut(s)	336, 472
HpyF10VI	GCNNNNNNNGC	8 cut(s)	197, 206, 400, 416, 464, 761, 1439, 2009
HpyF3I	CTNAG	6 cut(s)	201, 420, 591, 624, 1457, 1558
HpySE526I	ACGT	2 cut(s)	336, 472
Ksp22I	TGATCA	1 cut(s)	1188
Kzo9I	GATC	9 cut(s)	256, 423, 627, 643, 766, 899, 1188, 1890, 2067
LguI	GCTCTTC	1 cut(s)	453
LmnI	GCTCC	4 cut(s)	95, 214, 490, 1009
Lsp1109I	GCAGC	9 cut(s)	48, 340, 470, 550, 1122, 1207, 1420, 1487, 1999
LweI	GCATC	2 cut(s)	1451, 1652
MaeI	CTAG	7 cut(s)	326, 381, 494, 674, 1160, 2057, 2125
MaeII	ACGT	2 cut(s)	336, 472
MaeIII	GTNAC	4 cut(s)	268, 337, 365, 2037
MalI	GATC	9 cut(s)	258, 425, 629, 645, 768, 901, 1190, 1892, 2069
MboI	GATC	9 cut(s)	256, 423, 627, 643, 766, 899, 1188, 1890, 2067
MflI	RGATCY	4 cut(s)	627, 643, 766, 899
MhlI	GDGCHC	4 cut(s)	100, 202, 211, 1640
MluI	ACGCGT	1 cut(s)	2034
MmeI	TCCRAC	1 cut(s)	236
Mph1103I	ATGCAT	1 cut(s)	1655
MroXI	GAANNNNTTC	1 cut(s)	868
MseI	TTAA	4 cut(s)	609, 1385, 1509, 1749
MslI	CAYNNNNRTG	3 cut(s)	1648, 1658, 1682
MspA1I	CMGCKG	3 cut(s)	461, 895, 1039
MspI	CCGG	1 cut(s)	1710
MspR9I	CCNGG	5 cut(s)	17, 92, 1082, 1710, 1974
Mva1269I	GAATGC	1 cut(s)	1734
MvaI	CCWGG	4 cut(s)	17, 92, 1082, 1974
MvnI	CGCG	2 cut(s)	132, 2036
MwoI	GCNNNNNNNGC	8 cut(s)	197, 206, 400, 416, 464, 761, 1439, 2009
NciI	CCSGG	1 cut(s)	1710
NdeI	CATATG	3 cut(s)	660, 925, 1110
NdeII	GATC	9 cut(s)	256, 423, 627, 643, 766, 899, 1188, 1890, 2067
NlaIV	GGNNCC	2 cut(s)	24, 1011
NmuCI	GTSAC	2 cut(s)	337, 365
NsiI	ATGCAT	1 cut(s)	1655
NspI	RCATGY	4 cut(s)	854, 879, 1023, 1423
PaeR7I	CTCGAG	1 cut(s)	822
PagI	TCATGA	1 cut(s)	1981
PaqCI	CACCTGC	1 cut(s)	196
PceI	AGGCCT	1 cut(s)	90
PciI	ACATGT	1 cut(s)	850
PciSI	GCTCTTC	1 cut(s)	453
PctI	GAATGC	1 cut(s)	1734
PdmI	GAANNNNTTC	1 cut(s)	868
PfeI	GAWTC	3 cut(s)	1105, 1327, 1784
PflMI	CCANNNNNTGG	1 cut(s)	1006
PfoI	TCCNGGA	1 cut(s)	15
PkrI	GCNGC	9 cut(s)	63, 355, 460, 565, 1137, 1222, 1435, 1477, 2014
Ppu21I	YACGTR	1 cut(s)	337
PscI	ACATGT	1 cut(s)	850
PsiI	TTATAA	1 cut(s)	1398
Psp6I	CCWGG	4 cut(s)	15, 90, 1080, 1972
PspFI	CCCAGC	3 cut(s)	461, 895, 1039
PspGI	CCWGG	4 cut(s)	15, 90, 1080, 1972
PspN4I	GGNNCC	2 cut(s)	24, 1011
PspPI	GGNCC	4 cut(s)	44, 134, 1758, 1970
PstI	CTGCAG	2 cut(s)	66, 2017
PstNI	CAGNNNCTG	2 cut(s)	410, 443
PsuI	RGATCY	4 cut(s)	627, 643, 766, 899
PvuII	CAGCTG	3 cut(s)	461, 895, 1039
RsaI	GTAC	8 cut(s)	124, 171, 226, 246, 475, 637, 1197, 1268
RsaNI	GTAC	8 cut(s)	123, 170, 225, 245, 474, 636, 1196, 1267
RseI	CAYNNNNRTG	3 cut(s)	1648, 1658, 1682
SapI	GCTCTTC	1 cut(s)	453
SaqAI	TTAA	4 cut(s)	609, 1385, 1509, 1749
SatI	GCNGC	9 cut(s)	62, 354, 459, 564, 1136, 1221, 1434, 1476, 2013
Sau3AI	GATC	9 cut(s)	256, 423, 627, 643, 766, 899, 1188, 1890, 2067
Sau96I	GGNCC	4 cut(s)	44, 134, 1758, 1970
ScaI	AGTACT	1 cut(s)	124
ScrFI	CCNGG	5 cut(s)	17, 92, 1082, 1710, 1974
SduI	GDGCHC	4 cut(s)	100, 202, 211, 1640
SfaNI	GCATC	2 cut(s)	1451, 1652
SfcI	CTRYAG	3 cut(s)	62, 2013, 2042
Sfr274I	CTCGAG	1 cut(s)	822
SinI	GGWCC	1 cut(s)	134
SlaI	CTCGAG	1 cut(s)	822
SmiMI	CAYNNNNRTG	3 cut(s)	1648, 1658, 1682
SmlI	CTYRAG	4 cut(s)	216, 822, 1819, 2086
SmoI	CTYRAG	4 cut(s)	216, 822, 1819, 2086
SseBI	AGGCCT	1 cut(s)	90
SsiI	CCGC	4 cut(s)	132, 549, 1320, 1371
SspMI	CTAG	7 cut(s)	326, 381, 494, 674, 1160, 2057, 2125
StuI	AGGCCT	1 cut(s)	90
StyD4I	CCNGG	5 cut(s)	15, 90, 1080, 1708, 1972
StyI	CCWWGG	1 cut(s)	1590
TaaI	ACNGT	4 cut(s)	1681, 1705, 1768, 2046
TaiI	ACGT	2 cut(s)	339, 475
TaqI	TCGA	5 cut(s)	823, 862, 1333, 1453, 1805
TatI	WGTACW	2 cut(s)	122, 169
TfiI	GAWTC	3 cut(s)	1105, 1327, 1784
Tru1I	TTAA	4 cut(s)	609, 1385, 1509, 1749
Tru9I	TTAA	4 cut(s)	609, 1385, 1509, 1749
TscAI	CASTG	5 cut(s)	789, 1645, 1684, 1708, 1858
TseFI	GTSAC	2 cut(s)	337, 365
TseI	GCWGC	9 cut(s)	61, 353, 458, 563, 1135, 1220, 1433, 1475, 2012
Tsp45I	GTSAC	2 cut(s)	337, 365
TspRI	CASTG	5 cut(s)	789, 1645, 1684, 1708, 1858
Van91I	CCANNNNNTGG	1 cut(s)	1006
VpaK11BI	GGWCC	1 cut(s)	134
XapI	RAATTY	3 cut(s)	156, 385, 1870
XceI	RCATGY	4 cut(s)	854, 879, 1023, 1423
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1957
XhoI	CTCGAG	1 cut(s)	822
XmnI	GAANNNNTTC	1 cut(s)	868
XspI	CTAG	7 cut(s)	326, 381, 494, 674, 1160, 2057, 2125
ZrmI	AGTACT	1 cut(s)	124
Zsp2I	ATGCAT	1 cut(s)	1655

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.