40S ribosomal protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Ribosomal_S28e | PF01200 | 1 - 51 | 5.2e-28 | Ribosomal protein S28e |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 16 |
| Acc36I | ACCTGC | 1 cut(s) | 16 |
| AciI | CCGC | 1 cut(s) | 154 |
| AclWI | GGATC | 1 cut(s) | 22 |
| AlwI | GGATC | 1 cut(s) | 22 |
| AspS9I | GGNCC | 1 cut(s) | 92 |
| AsuHPI | GGTGA | 2 cut(s) | 40, 49 |
| AvaII | GGWCC | 1 cut(s) | 92 |
| BauI | CACGAG | 1 cut(s) | 18 |
| BfuAI | ACCTGC | 1 cut(s) | 16 |
| Bme18I | GGWCC | 1 cut(s) | 92 |
| BmgT120I | GGNCC | 1 cut(s) | 92 |
| BmiI | GGNNCC | 1 cut(s) | 93 |
| BpuEI | CTTGAG | 1 cut(s) | 146 |
| Bse1I | ACTGG | 2 cut(s) | 16, 95 |
| BseGI | GGATG | 1 cut(s) | 61 |
| BseMII | CTCAG | 1 cut(s) | 47 |
| BseNI | ACTGG | 2 cut(s) | 16, 95 |
| BslFI | GGGAC | 2 cut(s) | 18, 105 |
| BsmFI | GGGAC | 2 cut(s) | 18, 105 |
| Bsp143I | GATC | 1 cut(s) | 14 |
| BspACI | CCGC | 1 cut(s) | 154 |
| BspCNI | CTCAG | 1 cut(s) | 46 |
| BspHI | TCATGA | 1 cut(s) | 75 |
| BspLI | GGNNCC | 1 cut(s) | 93 |
| BspMI | ACCTGC | 1 cut(s) | 16 |
| BspPI | GGATC | 1 cut(s) | 22 |
| BsrI | ACTGG | 2 cut(s) | 16, 95 |
| BssMI | GATC | 1 cut(s) | 14 |
| BssSI | CACGAG | 1 cut(s) | 18 |
| Bst2BI | CACGAG | 1 cut(s) | 18 |
| Bst4CI | ACNGT | 1 cut(s) | 68 |
| BstDEI | CTNAG | 1 cut(s) | 33 |
| BstF5I | GGATG | 1 cut(s) | 61 |
| BstKTI | GATC | 1 cut(s) | 17 |
| BstMBI | GATC | 1 cut(s) | 14 |
| BstX2I | RGATCY | 1 cut(s) | 14 |
| BstYI | RGATCY | 1 cut(s) | 14 |
| BtsCI | GGATG | 1 cut(s) | 61 |
| BtsIMutI | CAGTG | 1 cut(s) | 102 |
| BveI | ACCTGC | 1 cut(s) | 16 |
| CciI | TCATGA | 1 cut(s) | 75 |
| Cfr13I | GGNCC | 1 cut(s) | 92 |
| CviAII | CATG | 1 cut(s) | 76 |
| DdeI | CTNAG | 1 cut(s) | 33 |
| DpnI | GATC | 1 cut(s) | 16 |
| DpnII | GATC | 1 cut(s) | 14 |
| Eco32I | GATATC | 1 cut(s) | 112 |
| Eco47I | GGWCC | 1 cut(s) | 92 |
| EcoRV | GATATC | 1 cut(s) | 112 |
| FaeI | CATG | 1 cut(s) | 79 |
| FaiI | YATR | 1 cut(s) | 77 |
| FaqI | GGGAC | 2 cut(s) | 18, 105 |
| FatI | CATG | 1 cut(s) | 75 |
| FokI | GGATG | 1 cut(s) | 68 |
| Hin1II | CATG | 1 cut(s) | 79 |
| HinfI | GANTC | 3 cut(s) | 31, 42, 128 |
| HphI | GGTGA | 2 cut(s) | 40, 49 |
| Hpy188I | TCNGA | 1 cut(s) | 133 |
| Hpy188III | TCNNGA | 2 cut(s) | 53, 76 |
| HpyAV | CCTTC | 1 cut(s) | 141 |
| HpyCH4III | ACNGT | 1 cut(s) | 68 |
| HpyF3I | CTNAG | 1 cut(s) | 33 |
| Hsp92II | CATG | 1 cut(s) | 79 |
| Kzo9I | GATC | 1 cut(s) | 14 |
| LpnPI | CCDG | 5 cut(s) | 11, 20, 38, 74, 108 |
| MaeIII | GTNAC | 1 cut(s) | 28 |
| MalI | GATC | 1 cut(s) | 16 |
| MboI | GATC | 1 cut(s) | 14 |
| MflI | RGATCY | 1 cut(s) | 14 |
| MlyI | GAGTC | 3 cut(s) | 25, 51, 137 |
| MnlI | CCTC | 5 cut(s) | 72, 93, 97, 129, 133 |
| NdeII | GATC | 1 cut(s) | 14 |
| NlaIII | CATG | 1 cut(s) | 79 |
| NlaIV | GGNNCC | 1 cut(s) | 93 |
| NmuCI | GTSAC | 1 cut(s) | 28 |
| PagI | TCATGA | 1 cut(s) | 75 |
| PaqCI | CACCTGC | 1 cut(s) | 16 |
| PleI | GAGTC | 3 cut(s) | 25, 50, 136 |
| PpsI | GAGTC | 3 cut(s) | 25, 50, 136 |
| PspN4I | GGNNCC | 1 cut(s) | 93 |
| PspPI | GGNCC | 1 cut(s) | 92 |
| PsuI | RGATCY | 1 cut(s) | 14 |
| Sau3AI | GATC | 1 cut(s) | 14 |
| Sau96I | GGNCC | 1 cut(s) | 92 |
| SchI | GAGTC | 3 cut(s) | 25, 51, 137 |
| SetI | ASST | 4 cut(s) | 30, 39, 122, 152 |
| SinI | GGWCC | 1 cut(s) | 92 |
| SmlI | CTYRAG | 1 cut(s) | 125 |
| SmoI | CTYRAG | 1 cut(s) | 125 |
| SsiI | CCGC | 1 cut(s) | 154 |
| TaaI | ACNGT | 1 cut(s) | 68 |
| TscAI | CASTG | 1 cut(s) | 102 |
| TseFI | GTSAC | 1 cut(s) | 28 |
| Tsp45I | GTSAC | 1 cut(s) | 28 |
| TspGWI | ACGGA | 1 cut(s) | 22 |
| TspRI | CASTG | 1 cut(s) | 102 |
| VpaK11BI | GGWCC | 1 cut(s) | 92 |