MD10G1313800.v1.1

Cysteine-rich receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
OG0000635
Physical Location & Seq
Reverse (-)
39827354 .. 39830185
2832 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1313800.v1.1.491

Sequence Viewer

Length: 2001 bp
ATGATTAGAGATCAAAACATGGCTAATTTCCCTAGTGTTCCGAAAACAATCTCTCTTTTTTCGCTTTGTTTTCTTATCACCCTCCTTTTTGATCTTGCTTATGCTGATCCTGATCCTCCATACAAGTTGTGCTCAGATGTTCGCGGTTATGTCGAAAATAGTACGTTTCAGAAAAACCTCCATAGCCTGCTAAATTCATTGCCTTCAAATGCTTCTGTTTCCAAGCTGTACAATACCTCCGCTGGAAATGAACCAGATAGAGTTTATGGCCTTTATATGTGCCTCAATTATGTTACGAATGAGATATGTCACAACTGCATCAACACCGCGCATTTAGACATTGTTAGGATTTGTCCCAGCTCAACAGAATCAGTTGTGTGGGAGGAAACGTGCCAACTGCGCTACTCCGATGTGAAGTTCTATGGTGAATTGAATGTGGCAGACAACATTGTGTCCACTAACAAGAAAAACGTTTCAGACCCAAAAAAGTTCGAGAATACTGTGAAGGAGAAGCTGAGGGAGCTTGCGAAGCAAGCGGCATATGATGCTTCAGCGAAAATGTATGCTACTGGAGATGTACCATTTGAAGATAAAGTGATATATGCTCTTGTGCAGTGCACTAGAGACTTATCTGGAGATGACTGTGGCAAATGCCTTCAGCAAGCCATAGAAGACGTTTTGAGAAAGTATTATTTCTCCATTGGTGCACGGCTTATGAGCCGGAGTTGCTATCTGAGGTACGAGTTGTATGGCTTCTATAAAGGTGCAACTGAAGCTTCTATTTCCAGCTCTCCAAATAACAACAAAGGGGACGGTAGAGGATGGCGGTGGCGGATCACGATCCTTACGGTTGTGTCAGCATGTCTAGCCATACTACTTTTGGGTTCCTGTGTCCATCTTGCAGTAAGAAAAAGAAACAAAAAGGGGAGTAGTGAGATTTTAAGACAACATGTATTGTTCCCGGACCGAAGTTTTCAAGGCAGAAACCAGAAAGTTGAGGAGTACCCCTATATCAGTTTGGCATCTATACATGCAGCTACGGATAAATTTTCTGATTCAAATAAGCTCGGAGAAGGTGGTTTTGGGCCTGTTTACAAGGGTGTACTGAGTGACGGTAAAGAAGTGGCGATCAAGAGGCTTTCAAGCTGTTCTGAGCAAGGCTCAGAGGAATTCACAAATGAAGTTCGGCTGCTAATGAAACTTCAACATAAAAATCTTGTTCGGCTTTTGGGTTTTTGTGTTGAGGGAAAGGAAAAACTGCTTGTCTATGAATACCTGCCAAACAGCAGCCTAGATGTCTTCCTCTTTGATTCAGAGAAACGAGCGCAGCTTGATTGGAGCAGACGTGTAAACATTATAAGTGGAATTGCAAGGGGAATTCTTTATTTACACGAGGAGTCTCGACTTCAAATCATCCATAGAGACCTGAAAGCTAGCAATGTTTTATTAGACGATGATATGAACCCTAAGATCTCCGATTTTGGCATGGCAAGGATCTTTGCAGGAAGTGAAGGCCAAGCAAATACGACTACAATAGTTGGGACATACGGATACATGGCTCCAGAATATGCAATGGAGGGAGTATATTCTGTCAAGTCTGACGTTTATGGTTTCGGAGTACTATTGCTTGAGATCATAACTGGGAGAAGGAACGCCGGCTTTCATCAAATAAAACGTGTTCCTAGCCTTGTAACATATGCATGGAAATTATGGCATGACGGAAAAGGGTTGGAGCTACTCGACCCACTACTACTCGATTCATGTGATCCAGATGAGTTTCTAAGATATCTCCATATCGGATTGTTGTGTGTCCAGGAAGATGCGTATGACAGGCCAACCATGTCTTCTGCTGTTGTAATGTTGAAAAGTGAAACTGTAACTCTTAGCCAACCCGAGAAACCTGCTTTCACGACGGGAATATTCACTGACCATTATATCGAGACAGCTGCTGGTGGTAGCTCTATTAATGGTCTAACAGTTTCTATCGTCGTGCCACGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF3403 Pkinase_Tyr Stress-antifung

Protein Analysis

667

Amino Acids

74.63

Weight (kDa)

6.53

Isoelectric Point (pI)

49.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 44 - 137 2.3e-20 Salt stress response/antifungal
Stress-antifung PF01657 155 - 249 2.6e-13 Salt stress response/antifungal
Pkinase PF00069 351 - 550 1e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 353 - 550 4e-49 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000635)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g02731 FvH4_3g02732 FvH4_3g02732 FvH4_3g02732 FvH4_3g02751 FvH4_3g02752 FvH4_3g02770 FvH4_3g02770 FvH4_3g02770 FvH4_3g02771
malus_domestica MD10G1249000.v1.1 MD10G1249100.v1.1 MD10G1313300.v1.1 MD10G1313400.v1.1 MD10G1313500.v1.1 MD10G1313600.v1.1 MD10G1313800.v1.1
prunus_persica Prupe.4G027200_v2.0.a1 Prupe.6G140300_v2.0.a1 Prupe.6G140400_v2.0.a1 Prupe.6G140400_v2.0.a1
pyrus_communis pycom10g26540 pycom10g26560 pycom10g26580 pycom10g26600
rosa_chinensis RchiOBHm_Chr5g0004141 RchiOBHm_Chr5g0004151 RchiOBHm_Chr5g0004161
rosa_laevigata RLG00000031205 RLG00000031206 RLG00000031208 RLG00000031209 RLG00000031210
rosa_multiflora Rmu_co8256217.1_g000001 Rmu_co8309209.1_g000001 Rmu_sc0000547.1_g000034 Rmu_sc0004964.1_g000028 Rmu_sc0007868.1_g000001 Rmu_sc0010028.1_g000001 Rmu_sc0017938.1_g000001 Rmu_sc0027606.1_g000001 Rmu_sc0027892.1_g000001
rosa_roxburghii Rroxscaffold_1G00071540 Rroxscaffold_1G00071550 Rroxscaffold_1G00071610 Rroxscaffold_1G00071620 Rroxscaffold_1G00071640 Rroxscaffold_1G00071650 Rroxscaffold_1G00071790 Rroxscaffold_1G00071800 Rroxscaffold_1G00071810 Rroxscaffold_1G00071850 Rroxscaffold_1G00071860 Rroxscaffold_1G00071880 Rroxscaffold_1G00071890
rosa_rugosa Rorug04G0410500 Rorug04G0410500 Rorug04G0410500 Rorug04G0410600
rosa_samantha Rh5AG037700 Rh5AG037800 Rh5AG037900 Rh5AG038000 Rh5BG037000 Rh5BG037100 Rh5BG037200 Rh5CG040400 Rh5CG040500 Rh5CG040600 Rh5CG040700 Rh5DG036400 Rh5DG036600 Rh5DG036800
rosa_wichuraiana Rw5G003410 Rw5G003420 Rw5G003590 Rw5G003600 Rw5G003610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1358
Acc36I ACCTGC 2 cut(s) 1284, 1909
AccII CGCG 2 cut(s) 144, 329
AciI CCGC 6 cut(s) 144, 240, 327, 536, 826, 832
AclI AACGTT 1 cut(s) 471
AclWI GGATC 6 cut(s) 101, 107, 835, 842, 1502, 1760
AcsI RAATTY 4 cut(s) 193, 1046, 1169, 1377
AcuI CTGAAG 3 cut(s) 534, 641, 792
AfaI GTAC 7 cut(s) 163, 230, 579, 740, 1004, 1104, 1620
AflIII ACRYGT 3 cut(s) 949, 1345, 1675
AgsI TTSAA 9 cut(s) 207, 433, 587, 977, 1059, 1143, 1205, 1409, 1864
AjiI CACGTC 1 cut(s) 1346
AjnI CCWGG 1 cut(s) 1812
AjuI GAANNNNNNNTTGG 4 cut(s) 1065, 1097, 1828, 1860
Alw21I GWGCWC 3 cut(s) 134, 620, 709
Alw26I GTCTC 4 cut(s) 618, 1404, 1416, 1934
Alw44I GTGCAC 2 cut(s) 616, 705
AlwI GGATC 6 cut(s) 101, 107, 835, 842, 1502, 1760
AlwNI CAGNNNCTG 1 cut(s) 1949
Ama87I CYCGRG 1 cut(s) 1892
AoxI GGCC 4 cut(s) 268, 1085, 1513, 1832
ApaLI GTGCAC 2 cut(s) 616, 705
ApeKI GCWGC 5 cut(s) 1034, 1189, 1287, 1327, 1946
ApoI RAATTY 4 cut(s) 193, 1046, 1169, 1377
AseI ATTAAT 1 cut(s) 1965
AspLEI GCGC 3 cut(s) 331, 402, 1327
AspS9I GGNCC 2 cut(s) 964, 1085
AsuC2I CCSGG 1 cut(s) 962
AsuHPI GGTGA 2 cut(s) 70, 437
AsuNHI GCTAGC 1 cut(s) 1433
AvaI CYCGRG 1 cut(s) 1892
AvaII GGWCC 1 cut(s) 964
BaeGI GKGCMC 2 cut(s) 620, 709
BauI CACGAG 1 cut(s) 1391
BbsI GAAGAC 3 cut(s) 678, 1291, 1836
Bbv12I GWGCWC 3 cut(s) 134, 620, 709
BbvCI CCTCAGC 1 cut(s) 515
BbvI GCAGC 5 cut(s) 1046, 1176, 1299, 1339, 1933
BccI CCATC 2 cut(s) 816, 903
BceAI ACGGC 1 cut(s) 725
BcgI CGANNNNNNTGC 4 cut(s) 1883, 1917, 1928, 1962
BciT130I CCWGG 1 cut(s) 1814
BciVI GTATCC 1 cut(s) 1544
BcnI CCSGG 1 cut(s) 962
BcoDI GTCTC 4 cut(s) 618, 1404, 1416, 1934
BfaI CTAG 6 cut(s) 33, 621, 866, 1292, 1434, 1683
BfuAI ACCTGC 2 cut(s) 1284, 1909
BfuI GTATCC 1 cut(s) 1544
BglII AGATCT 1 cut(s) 1470
BisI GCNGC 6 cut(s) 537, 1035, 1190, 1288, 1328, 1947
BlsI GCNGC 6 cut(s) 538, 1036, 1191, 1289, 1329, 1948
BmcAI AGTACT 1 cut(s) 1620
Bme1390I CCNGG 2 cut(s) 962, 1814
Bme18I GGWCC 1 cut(s) 964
BmeT110I CYCGRG 1 cut(s) 1892
BmgBI CACGTC 1 cut(s) 1346
BmgT120I GGNCC 2 cut(s) 964, 1085
BmiI GGNNCC 2 cut(s) 886, 1560
BmrFI CCNGG 2 cut(s) 962, 1814
BmrI ACTGGG 1 cut(s) 1650
BmsI GCATC 4 cut(s) 327, 535, 1031, 1810
BmtI GCTAGC 1 cut(s) 1437
BmuI ACTGGG 1 cut(s) 1650
BpiI GAAGAC 3 cut(s) 678, 1291, 1836
BplI GAGNNNNNCTC 2 cut(s) 1145, 1177
BpmI CTGGAG 3 cut(s) 591, 654, 1545
Bpu10I CCTNAGC 1 cut(s) 515
BpuEI CTTGAG 1 cut(s) 1649
BpuMI CCSGG 1 cut(s) 962
BsaBI GATNNNNATC 2 cut(s) 111, 839
BsaI GGTCTC 1 cut(s) 1416
BsaXI ACNNNNNCTCC 6 cut(s) 221, 251, 374, 404, 1330, 1360
Bse118I RCCGGY 1 cut(s) 1655
Bse1I ACTGG 2 cut(s) 574, 1645
Bse3DI GCAATG 3 cut(s) 197, 1444, 1578
Bse8I GATNNNNATC 2 cut(s) 111, 839
BseBI CCWGG 1 cut(s) 1814
BseGI GGATG 2 cut(s) 827, 1413
BseJI GATNNNNATC 2 cut(s) 111, 839
BseMI GCAATG 3 cut(s) 197, 1444, 1578
BseMII CTCAG 6 cut(s) 147, 506, 725, 1097, 1143, 1176
BseNI ACTGG 2 cut(s) 574, 1645
BseRI GAGGAG 2 cut(s) 1013, 1409
BseSI GKGCMC 2 cut(s) 620, 709
BseXI GCAGC 5 cut(s) 1046, 1176, 1299, 1339, 1933
BseYI CCCAGC 1 cut(s) 356
BsgI GTGCAG 1 cut(s) 632
Bsh1236I CGCG 2 cut(s) 144, 329
BshFI GGCC 4 cut(s) 270, 1087, 1515, 1834
BsiHKAI GWGCWC 3 cut(s) 134, 620, 709
BsiHKCI CYCGRG 1 cut(s) 1892
BsiSI CCGG 3 cut(s) 721, 962, 1656
BslFI GGGAC 3 cut(s) 339, 824, 1555
BsmAI GTCTC 4 cut(s) 618, 1404, 1416, 1934
BsmFI GGGAC 3 cut(s) 339, 824, 1555
BsnI GGCC 4 cut(s) 270, 1087, 1515, 1834
Bso31I GGTCTC 1 cut(s) 1416
BsoBI CYCGRG 1 cut(s) 1892
Bsp1286I GDGCHC 3 cut(s) 134, 620, 709
Bsp1407I TGTACA 1 cut(s) 228
BspACI CCGC 6 cut(s) 144, 240, 327, 536, 826, 832
BspANI GGCC 4 cut(s) 270, 1087, 1515, 1834
BspCNI CTCAG 6 cut(s) 146, 507, 726, 1098, 1144, 1175
BspFNI CGCG 2 cut(s) 144, 329
BspLI GGNNCC 2 cut(s) 886, 1560
BspMI ACCTGC 2 cut(s) 1284, 1909
BspOI GCTAGC 1 cut(s) 1437
BspPI GGATC 6 cut(s) 101, 107, 835, 842, 1502, 1760
BspTNI GGTCTC 1 cut(s) 1416
BsrDI GCAATG 3 cut(s) 197, 1444, 1578
BsrFI RCCGGY 1 cut(s) 1655
BsrGI TGTACA 1 cut(s) 228
BsrI ACTGG 2 cut(s) 574, 1645
BssAI RCCGGY 1 cut(s) 1655
BssSI CACGAG 1 cut(s) 1391
Bst2BI CACGAG 1 cut(s) 1391
Bst2UI CCWGG 1 cut(s) 1814
Bst4CI ACNGT 7 cut(s) 502, 644, 815, 850, 1115, 1876, 1978
BstAPI GCANNNNNTGC 1 cut(s) 545
BstAUI TGTACA 1 cut(s) 228
BstC8I GCNNGC 6 cut(s) 188, 525, 534, 663, 1435, 1657
BstDEI CTNAG 9 cut(s) 133, 515, 734, 1106, 1152, 1162, 1467, 1781, 1883
BstF5I GGATG 2 cut(s) 827, 1413
BstFNI CGCG 2 cut(s) 144, 329
BstHHI GCGC 3 cut(s) 331, 402, 1327
BstMAI GTCTC 4 cut(s) 618, 1404, 1416, 1934
BstMWI GCNNNNNNNGC 8 cut(s) 399, 520, 529, 533, 545, 726, 773, 866
BstNI CCWGG 1 cut(s) 1814
BstNSI RCATGY 3 cut(s) 864, 953, 1034
BstSCI CCNGG 2 cut(s) 960, 1812
BstSLI GKGCMC 2 cut(s) 620, 709
BstUI CGCG 2 cut(s) 144, 329
BstV1I GCAGC 5 cut(s) 1046, 1176, 1299, 1339, 1933
BstV2I GAAGAC 3 cut(s) 678, 1291, 1836
BstX2I RGATCY 2 cut(s) 1470, 1494
BstYI RGATCY 2 cut(s) 1470, 1494
BsuI GTATCC 1 cut(s) 1544
BsuRI GGCC 4 cut(s) 270, 1087, 1515, 1834
BtrI CACGTC 1 cut(s) 1346
BtsCI GGATG 2 cut(s) 827, 1413
BtsI GCAGTG 1 cut(s) 620
BtsIMutI CAGTG 2 cut(s) 620, 1923
BveI ACCTGC 2 cut(s) 1284, 1909
Cac8I GCNNGC 6 cut(s) 188, 525, 534, 663, 1435, 1657
CaiI CAGNNNCTG 1 cut(s) 1949
CfoI GCGC 3 cut(s) 331, 402, 1327
Cfr10I RCCGGY 1 cut(s) 1655
Cfr13I GGNCC 2 cut(s) 964, 1085
CpoI CGGWCCG 1 cut(s) 964
Csp6I GTAC 7 cut(s) 162, 229, 578, 739, 1003, 1103, 1619
CspI CGGWCCG 1 cut(s) 964
CviQI GTAC 7 cut(s) 162, 229, 578, 739, 1003, 1103, 1619
DdeI CTNAG 9 cut(s) 133, 515, 734, 1106, 1152, 1162, 1467, 1781, 1883
EciI GGCGGA 1 cut(s) 847
Eco31I GGTCTC 1 cut(s) 1416
Eco32I GATATC 1 cut(s) 1787
Eco47I GGWCC 1 cut(s) 964
Eco57I CTGAAG 3 cut(s) 534, 641, 792
Eco88I CYCGRG 1 cut(s) 1892
EcoRI GAATTC 2 cut(s) 1169, 1377
EcoRII CCWGG 1 cut(s) 1812
EcoRV GATATC 1 cut(s) 1787
EcoT22I ATGCAT 1 cut(s) 1702
FaqI GGGAC 3 cut(s) 339, 824, 1555
FauNDI CATATG 2 cut(s) 541, 1696
Fnu4HI GCNGC 6 cut(s) 537, 1035, 1190, 1288, 1328, 1947
FokI GGATG 2 cut(s) 834, 1400
Fsp4HI GCNGC 6 cut(s) 537, 1035, 1190, 1288, 1328, 1947
FspBI CTAG 6 cut(s) 33, 621, 866, 1292, 1434, 1683
GlaI GCGC 3 cut(s) 330, 401, 1326
GluI GCNGC 6 cut(s) 537, 1035, 1190, 1288, 1328, 1947
GsaI CCCAGC 1 cut(s) 360
GsuI CTGGAG 3 cut(s) 591, 654, 1545
HaeIII GGCC 4 cut(s) 270, 1087, 1515, 1834
HapII CCGG 3 cut(s) 721, 962, 1656
HhaI GCGC 3 cut(s) 331, 402, 1327
Hin6I GCGC 3 cut(s) 329, 400, 1325
HinP1I GCGC 3 cut(s) 329, 400, 1325
HindIII AAGCTT 1 cut(s) 774
HinfI GANTC 5 cut(s) 368, 1055, 1310, 1397, 1757
HpaII CCGG 3 cut(s) 721, 962, 1656
HphI GGTGA 2 cut(s) 70, 437
Hpy166II GTNNAC 6 cut(s) 456, 618, 707, 1093, 1103, 1351
Hpy8I GTNNAC 6 cut(s) 456, 618, 707, 1093, 1103, 1351
Hpy99I CGWCG 2 cut(s) 1915, 1991
HpyAV CCTTC 6 cut(s) 213, 499, 665, 1067, 1505, 1641
HpyCH4III ACNGT 7 cut(s) 502, 644, 815, 850, 1115, 1876, 1978
HpyCH4IV ACGT 7 cut(s) 164, 389, 471, 675, 1345, 1602, 1675
HpyF10VI GCNNNNNNNGC 8 cut(s) 399, 520, 529, 533, 545, 726, 773, 866
HpyF3I CTNAG 9 cut(s) 133, 515, 734, 1106, 1152, 1162, 1467, 1781, 1883
HpySE526I ACGT 7 cut(s) 164, 389, 471, 675, 1345, 1602, 1675
HspAI GCGC 3 cut(s) 329, 400, 1325
KroI GCCGGC 1 cut(s) 1655
KroNI GCCGGC 1 cut(s) 1657
LmnI GCTCC 4 cut(s) 520, 1338, 1564, 1732
Lsp1109I GCAGC 5 cut(s) 1046, 1176, 1299, 1339, 1933
LweI GCATC 4 cut(s) 327, 535, 1031, 1810
MaeI CTAG 6 cut(s) 33, 621, 866, 1292, 1434, 1683
MaeII ACGT 7 cut(s) 164, 389, 471, 675, 1345, 1602, 1675
MaeIII GTNAC 5 cut(s) 292, 308, 1109, 1690, 1876
MboII GAAGA 5 cut(s) 599, 683, 1291, 1829, 1836
MflI RGATCY 2 cut(s) 1470, 1494
MhlI GDGCHC 3 cut(s) 134, 620, 709
MluCI AATT 9 cut(s) 25, 193, 286, 428, 1046, 1169, 1365, 1377, 1706
MlyI GAGTC 1 cut(s) 1406
MmeI TCCRAC 1 cut(s) 1710
Mph1103I ATGCAT 1 cut(s) 1702
MroNI GCCGGC 1 cut(s) 1655
MseI TTAA 2 cut(s) 941, 1965
MslI CAYNNNNRTG 1 cut(s) 1699
MspA1I CMGCKG 2 cut(s) 242, 1946
MspI CCGG 3 cut(s) 721, 962, 1656
MspR9I CCNGG 2 cut(s) 962, 1814
MvaI CCWGG 1 cut(s) 1814
MvnI CGCG 2 cut(s) 144, 329
MwoI GCNNNNNNNGC 8 cut(s) 399, 520, 529, 533, 545, 726, 773, 866
NaeI GCCGGC 1 cut(s) 1657
NciI CCSGG 1 cut(s) 962
NdeI CATATG 2 cut(s) 541, 1696
NgoMIV GCCGGC 1 cut(s) 1655
NheI GCTAGC 1 cut(s) 1433
NlaIV GGNNCC 2 cut(s) 886, 1560
NmuCI GTSAC 2 cut(s) 308, 1109
NsiI ATGCAT 1 cut(s) 1702
NspI RCATGY 3 cut(s) 864, 953, 1034
PciI ACATGT 1 cut(s) 949
PdiI GCCGGC 1 cut(s) 1657
PfeI GAWTC 4 cut(s) 368, 1055, 1310, 1757
PfoI TCCNGGA 2 cut(s) 960, 1812
PkrI GCNGC 6 cut(s) 538, 1036, 1191, 1289, 1329, 1948
PleI GAGTC 1 cut(s) 1405
PpsI GAGTC 1 cut(s) 1405
PscI ACATGT 1 cut(s) 949
PshBI ATTAAT 1 cut(s) 1965
PsiI TTATAA 1 cut(s) 1358
Psp1406I AACGTT 1 cut(s) 471
Psp6I CCWGG 1 cut(s) 1812
PspFI CCCAGC 1 cut(s) 356
PspGI CCWGG 1 cut(s) 1812
PspN4I GGNNCC 2 cut(s) 886, 1560
PspPI GGNCC 2 cut(s) 964, 1085
PstNI CAGNNNCTG 1 cut(s) 1949
PsuI RGATCY 2 cut(s) 1470, 1494
PvuII CAGCTG 1 cut(s) 1946
RsaI GTAC 7 cut(s) 163, 230, 579, 740, 1004, 1104, 1620
RsaNI GTAC 7 cut(s) 162, 229, 578, 739, 1003, 1103, 1619
RseI CAYNNNNRTG 1 cut(s) 1699
Rsr2I CGGWCCG 1 cut(s) 964
RsrII CGGWCCG 1 cut(s) 964
SaqAI TTAA 2 cut(s) 941, 1965
SatI GCNGC 6 cut(s) 537, 1035, 1190, 1288, 1328, 1947
Sau96I GGNCC 2 cut(s) 964, 1085
ScaI AGTACT 1 cut(s) 1620
SchI GAGTC 1 cut(s) 1406
ScrFI CCNGG 2 cut(s) 962, 1814
SduI GDGCHC 3 cut(s) 134, 620, 709
SfaNI GCATC 4 cut(s) 327, 535, 1031, 1810
SinI GGWCC 1 cut(s) 964
SmiMI CAYNNNNRTG 1 cut(s) 1699
SmlI CTYRAG 1 cut(s) 1628
SmoI CTYRAG 1 cut(s) 1628
Sse9I AATT 9 cut(s) 25, 193, 286, 428, 1046, 1169, 1365, 1377, 1706
SsiI CCGC 6 cut(s) 144, 240, 327, 536, 826, 832
SspI AATATT 1 cut(s) 1920
SspMI CTAG 6 cut(s) 33, 621, 866, 1292, 1434, 1683
StyD4I CCNGG 2 cut(s) 960, 1812
TaaI ACNGT 7 cut(s) 502, 644, 815, 850, 1115, 1876, 1978
TaiI ACGT 7 cut(s) 167, 392, 474, 678, 1348, 1605, 1678
TaqI TCGA 6 cut(s) 153, 492, 1402, 1740, 1755, 1938
TaqII GACCGA 1 cut(s) 981
TasI AATT 9 cut(s) 25, 193, 286, 428, 1046, 1169, 1365, 1377, 1706
TatI WGTACW 3 cut(s) 228, 1102, 1618
TauI GCSGC 1 cut(s) 539
TfiI GAWTC 4 cut(s) 368, 1055, 1310, 1757
Tru1I TTAA 2 cut(s) 941, 1965
Tru9I TTAA 2 cut(s) 941, 1965
TscAI CASTG 2 cut(s) 620, 1930
TseFI GTSAC 2 cut(s) 308, 1109
TseI GCWGC 5 cut(s) 1034, 1189, 1287, 1327, 1946
Tsp45I GTSAC 2 cut(s) 308, 1109
TspDTI ATGAA 8 cut(s) 186, 264, 1194, 1211, 1284, 1475, 1652, 1749
TspGWI ACGGA 3 cut(s) 1055, 1563, 1734
TspRI CASTG 2 cut(s) 620, 1930
VneI GTGCAC 2 cut(s) 616, 705
VpaK11BI GGWCC 1 cut(s) 964
VspI ATTAAT 1 cut(s) 1965
XapI RAATTY 4 cut(s) 193, 1046, 1169, 1377
XceI RCATGY 3 cut(s) 864, 953, 1034
XcmI CCANNNNNNNNNTGG 1 cut(s) 877
XspI CTAG 6 cut(s) 33, 621, 866, 1292, 1434, 1683
ZrmI AGTACT 1 cut(s) 1620
Zsp2I ATGCAT 1 cut(s) 1702
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.