Rw5G003590

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Forward (+)
3450120 .. 3456794
6675 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G003590.1

Sequence Viewer

Length: 4020 bp
ATGTTTCGTTTTCCAGTACTGTTTTTGCTTTGTTCTGTCATCATCTCTCTCTTTTGTGATCTTGCTTATGCTGACCCTCCATATAAGCTATGCTCAAACACTTCCTACTATTCAGATAATAGTACGTTTCAGACAAACCTCAACACTCTGCTCAATTCATTACCTTCCAATGCTTCTGTTTCCAAGTTGTACAATACATCGTTTGGAAATGAGCCAGATAAAGTCTTTGCTCTCTACATGTGCCTCGACTATCTTGATCCCGGTTCCTGTCATGATTGCATAAACATGGCGCAACAAGACATTGCAAACATATGTCCTTACTCCAAAGAAGCGGTTGTATGGGAGGAGAACTGTCAACTGCGCTACTCCAATCAGAATTTCTTTGGCAGATTGAATGTAGATGACAACATCCCCTTAGATAACAAGAAGAATATTTCAGTTCCTGAAAAATTCGAGACAGTTGTGAACAAGACGCTGAGTAACCTCGCTGAGCAGGCGGCTTTTAATCATTCACTGGACATGTATGCCACTGGTGAAGTACCCTTTCAACATAAAATGGTATATGCTCTTGTGCAGTGCACTACAGACTTATCTGGGGAAGACTGTGATATATGCCTTGTGAGAGCCATAGAAGATGTTTTAAGAGCGTTCTATTTCTCCATCGGTGCGAGACTTCTCAGTCGTAGTTGTTATCTGAGGTATGAGTTTTATCCATTCTATGACGGGGCAACGTCTGAAGCTTCTACTGCTAATAACAAAGGAGGTAAGAAAATATGGTTGATCACAATCCTTACAATTGTGTCAGCATGCCTGGGGGTACTGCTTGTAGTCTTCTGTGTCTGTCTTGTAATGAGAAAATCGAAGAAAAAAGGGAAAAGAGAAATTTTAGGACAGCATGATTTGTTCCATAGACAAAATGACGCAAAAGCTCAGGAGTACCCCTTCATTAGTTTGGCTTCTATACATGCAGCTACTAACAAATTCTCTGATTCAAATAAGCTTGGGGAAGGTGGTTTTGGCCCAGTTTACAAGGGTGTACTGAGGGATGGAAAGGAAGTGGCAATCAAGAGGCTTTCAAGCTGTTCGGAGCAAGGTTTGGAGGAATTCACAAACGAAGTTCTACTGATATTGAAACTTCAGCACAAAAATCTTGTCCGGCTCTTAGGTTTCTGTGTCGATGGAGAAGAAAAACTGCTTGTTTATGAATACATGCCAAACAGCAGCTTAGATGTCATCCTTTTTGATTCAGCAAAACGCGCACAACTTGATTGGAGCAGACGTGTGAGCATCATTAGTGGAATTGCAAGGGGAATACTTTATTTGCATGAGGACTCTCGACTTAGAATCATCCATAGAGACTTGAAAGCTAGCAACATATTATTGGACAATGAGATGAATCCAAAGATCTCAGATTTTGGCATGGCAAGGATCTTTGCAGGAAGTGAAGGACAAGCTAATACTGCTACAATAGTTGGGACTTATGGATATATGGCCCCGGAGTATGCTATGGAGGGACTATATTCTGTCAAGTCCGATGTTTATGGCTTTGGAGTACTCTTGCTTGAGATCATAACTGGGAGAAGGAACACTGGCTTTCATTTACTAAAACGTGGGCCTAGCCTCGTAACTTATGCATGGAAATTATGGGATGAAGGAAAAGGGTTGGAGCTAATTGATCCGTCACTGGTTGGTTCATGTGATCCAGAAGAATTCTTAAGATATCTCCACATTGGGTTGTTGTGTGTTCAAGAAGATGCAAATGACAGGCCAACCATGTCTTCTGCAGTTGTAATGTTGAAAAGTGAAACTGTAAGTCTCACTCAACCTGAAAAGCCCGCTTTCAACATGGGAAGATTCACTAATCAGCATACTGAGGGAGGTGCTGATAGTTGCTCAATTAATGGATTAACAGTTTCTAATATCATTCCTCGGTCAAGTCAAGTCTGCTATGTTGTGCCACTTCCTATGCTAAGAAGTTTCTTTGCTATTGAATATCGGAAGTCAAACCAGCATTTGAGAACTAAGTTAATGAGAATGGATACGCTTTCAGTTATGCTTTTCATGATTCTACCACTTTTGTTACCAGCTACCGTTTCTGGTGCAGATCCACTTTCCACTTTTTGCTCAGATGATGGCATCATCTACACTCCTGGCAGCCAATTTGAAAGTAATCTCAAGCAGCTCCTTGAGTCATTGTCATCCAACACTTCCGTCTTCGGTGGTTTCTACAACGACACAATTGGCACTAGCCGTGACAGAGTCTATGGACAAACACTTTGTAGAGGGGATGTGAGCTCCACAGCTTGTCAGAAATGTGTGAGTGATGCAAGCCAGGAAATCTTCAACAGTTGTAAATCTAGAGATGCATTGATCTGGTATGAACTATGTCAAGTTCGCTATTCCTACCAGATGTTCTTTTCGTCAATGTCTTATACTGGGAAGTACCCGGACCAGAATAATCAGCAGAAGAATGTATCAGATGCACATTATTTTGGTGATGTTTTGAGGTATTTAATGAATAACCTCTCCGGAGAGTCTCTGTTTACTCCTCCAAAGAAAATGTTTGCAACTGGTGATATTGAGCTTTCGGGAAATAGAATTATTTATGGTCTGGAACAGTGCACCAGAGACATCTCTGCAAGAGACTGCAATAACTGTCTGGTTTTTGCTTTAGAGGATCTTTCATCATGCTGCTCCTCTCATCAAGGTGGAACTGTAGTCAGTAGAAATTGTAATGTGAGGTTTGAGATCTCCCGGTTTTTTAATGACACTTCAAGCAGTCGGTTAATTTATCCATATTCAAAAGGGGATGACAGGAAGACTTGGAAGGTGGTGGTTGCATGTGCATCCGCTATACTATTTGCAGTTCTAGTTGTACTTTGTGCAGTTCATTTTCGACGGCAAAAGAGATTGAAAAATGTCAACGATGAAGAGATCAGAAGCGAGCATGTACTCTTACATGATCTGGCAAGTCCCACTGAAGTAACAATTACAGAAGAAGGCGTATTGGTGACTTCTGAGGAACTGCCATTCGTTGATGTAGCAACTATAAAGATAGCTACAGATGACTTTTCAGATTCCAACAAGCTTGGACAAGGTGGGTTTGGTACTGTTTACAAGGGTGTGCTACCAGATGGGAGAGAAGTAGCTGTTAAAAGATTGTCAAGGAAGTCATGGCAAGGCTTAGAGGAGTTTAAAAACGAAGTCATACTCATCGCAAAGCTTCAACACAGAAACCTAGTGCGGCTGTTGTCATGTGGCTTTGAAGGAGAGGAGAAGCTGCTTTTGTATGAGTACATGCCAAATAAAAGCCTTGATACTTTCATCTTTGATTCGCAAAAGCGTGCTGAACTTTGTTGGGAAACATATCACAACATCATTAAAGGAATCGCCAGAGGACTTCTGTATCTTCATGAAGACTCCCGGCTCAGAATCATTCACAGAGATTTAAAGCCCAGCAATGTACTTTTGGACCATGAAATGGTGGCCAAAATTTCAGATTTTGGCATGGCAAGGATATTTTGTGAAAATCAGAACACAGCTAATACCAAAAGAGTTGTAGGAACATATGGCTACATGGCTCCGGAGTATGCAATGGAGGGTCTATTTTCTGTAAAATCTGATGTTTTCAGCTTTGGAGTAATCATGCTTGAGATTATTAGTGGGAAAAAAAATAGTGGATTCTACCTCACTGAACATGCCAAGACACTAGTTGCATATGCATGGAACCTATGGAAGGATGGAAAAGAAGTTGAATTTGTAGATCCTTGCTTGATGGAATCATCCGCGATAAAAGAGATTTTGAGATGCATGCATATCGGGCTTTTGTGTGTCCAGGAAGACCCTGAAGAAAGACCAACAATGTCAAATGTGGTTGTGTTGCTGGAAAGTGATTCAATTGAACTTGCTGAGCCAAAGAAACCAGCAATTTTTGCAGCGAGTAGAATTGCTCCGATTGACGAGTCTACTTCTAGTCCTACAACGAATGGCCTCACTCTTTCCATCATTTTGCCAAGGTGA

Protein Analysis

1339

Amino Acids

150.3

Weight (kDa)

5.87

Isoelectric Point (pI)

48.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 31 - 125 3.6e-21 Salt stress response/antifungal
Stress-antifung PF01657 143 - 236 7.7e-12 Salt stress response/antifungal
Pkinase PF00069 329 - 528 5.9e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 331 - 594 7.8e-47 Protein tyrosine and serine/threonine kinase
Stress-antifung PF01657 708 - 801 5.1e-22 Salt stress response/antifungal
Stress-antifung PF01657 820 - 916 1.1e-11 Salt stress response/antifungal
Pkinase PF00069 1025 - 1291 4.4e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 1027 - 1293 3.7e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000635)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g02731 FvH4_3g02732 FvH4_3g02732 FvH4_3g02732 FvH4_3g02751 FvH4_3g02752 FvH4_3g02770 FvH4_3g02770 FvH4_3g02770 FvH4_3g02771
malus_domestica MD10G1249000.v1.1 MD10G1249100.v1.1 MD10G1313300.v1.1 MD10G1313400.v1.1 MD10G1313500.v1.1 MD10G1313600.v1.1 MD10G1313800.v1.1
prunus_persica Prupe.4G027200_v2.0.a1 Prupe.6G140300_v2.0.a1 Prupe.6G140400_v2.0.a1 Prupe.6G140400_v2.0.a1
pyrus_communis pycom10g26540 pycom10g26560 pycom10g26580 pycom10g26600
rosa_chinensis RchiOBHm_Chr5g0004141 RchiOBHm_Chr5g0004151 RchiOBHm_Chr5g0004161
rosa_laevigata RLG00000031205 RLG00000031206 RLG00000031208 RLG00000031209 RLG00000031210
rosa_multiflora Rmu_co8256217.1_g000001 Rmu_co8309209.1_g000001 Rmu_sc0000547.1_g000034 Rmu_sc0004964.1_g000028 Rmu_sc0007868.1_g000001 Rmu_sc0010028.1_g000001 Rmu_sc0017938.1_g000001 Rmu_sc0027606.1_g000001 Rmu_sc0027892.1_g000001
rosa_roxburghii Rroxscaffold_1G00071540 Rroxscaffold_1G00071550 Rroxscaffold_1G00071610 Rroxscaffold_1G00071620 Rroxscaffold_1G00071640 Rroxscaffold_1G00071650 Rroxscaffold_1G00071790 Rroxscaffold_1G00071800 Rroxscaffold_1G00071810 Rroxscaffold_1G00071850 Rroxscaffold_1G00071860 Rroxscaffold_1G00071880 Rroxscaffold_1G00071890
rosa_rugosa Rorug04G0410500 Rorug04G0410500 Rorug04G0410500 Rorug04G0410600
rosa_samantha Rh5AG037700 Rh5AG037800 Rh5AG037900 Rh5AG038000 Rh5BG037000 Rh5BG037100 Rh5BG037200 Rh5CG040400 Rh5CG040500 Rh5CG040600 Rh5CG040700 Rh5DG036400 Rh5DG036600 Rh5DG036800
rosa_wichuraiana Rw5G003410 Rw5G003420 Rw5G003590 Rw5G003600 Rw5G003610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 678
AccB7I CCANNNNNTGG 1 cut(s) 3481
AccI GTMKAC 1 cut(s) 3965
AccII CGCG 2 cut(s) 1257, 3788
AccIII TCCGGA 2 cut(s) 2528, 3583
AciI CCGC 6 cut(s) 332, 497, 1836, 2850, 3244, 3786
AclWI GGATC 7 cut(s) 251, 1436, 1670, 1694, 2099, 2685, 3758
AcoI YGGCCR 1 cut(s) 3486
AcsI RAATTY 8 cut(s) 376, 449, 882, 980, 1103, 1709, 3492, 3755
AcuI CTGAAG 4 cut(s) 756, 1121, 3000, 3867
AfiI CCNNNNNNNGG 2 cut(s) 3481, 3736
AflII CTTAAG 1 cut(s) 1714
AflIII ACRYGT 3 cut(s) 237, 519, 1279
AhlI ACTAGT 1 cut(s) 3709
AjiI CACGTC 1 cut(s) 1280
AjnI CCWGG 4 cut(s) 810, 2149, 2331, 3834
AjuI GAANNNNNNNTTGG 6 cut(s) 362, 394, 999, 1031, 1762, 1794
Alw21I GWGCWC 3 cut(s) 581, 2297, 2624
Alw26I GTCTC 7 cut(s) 449, 664, 1350, 1820, 2541, 2622, 2637
Alw44I GTGCAC 2 cut(s) 577, 2620
AlwI GGATC 7 cut(s) 251, 1436, 1670, 1694, 2099, 2685, 3758
AlwNI CAGNNNCTG 1 cut(s) 443
Aor13HI TCCGGA 2 cut(s) 2528, 3583
AoxI GGCC 6 cut(s) 1018, 1491, 1613, 1766, 3486, 3988
ApaLI GTGCAC 2 cut(s) 577, 2620
ApeKI GCWGC 7 cut(s) 968, 1221, 2154, 2179, 2691, 3280, 3935
ApoI RAATTY 8 cut(s) 376, 449, 882, 980, 1103, 1709, 3492, 3755
ArsI GACNNNNNNTTYG 4 cut(s) 1137, 1169, 2259, 2291
AseI ATTAAT 1 cut(s) 1899
AspLEI GCGC 3 cut(s) 292, 363, 1259
AspS9I GGNCC 5 cut(s) 1019, 1492, 1613, 2449, 3472
AsuC2I CCSGG 5 cut(s) 261, 1496, 2447, 2755, 3424
AsuHPI GGTGA 4 cut(s) 545, 2507, 2585, 3022
AsuNHI GCTAGC 1 cut(s) 1367
AvaII GGWCC 2 cut(s) 2449, 3472
BaeGI GKGCMC 2 cut(s) 581, 2624
BaeI ACNNNNGTAYC 2 cut(s) 3389, 3422
BalI TGGCCA 1 cut(s) 3488
BanII GRGCYC 1 cut(s) 2297
BbsI GAAGAC 7 cut(s) 606, 823, 1770, 2206, 2825, 3423, 3846
Bbv12I GWGCWC 3 cut(s) 581, 2297, 2624
BbvI GCAGC 7 cut(s) 980, 1233, 2166, 2191, 2678, 3267, 3947
BccI CCATC 8 cut(s) 668, 1040, 1172, 2126, 3128, 3734, 3769, 4010
BceAI ACGGC 2 cut(s) 2235, 2915
BcgI CGANNNNNNTGC 2 cut(s) 3799, 3833
BciT130I CCWGG 4 cut(s) 812, 2151, 2333, 3836
BciVI GTATCC 1 cut(s) 2032
BclI TGATCA 1 cut(s) 780
BcnI CCSGG 5 cut(s) 261, 1496, 2447, 2755, 3424
BcoDI GTCTC 7 cut(s) 449, 664, 1350, 1820, 2541, 2622, 2637
BcuI ACTAGT 1 cut(s) 3709
BfaI CTAG 8 cut(s) 1368, 1617, 2247, 2358, 2870, 3239, 3710, 3972
BfmI CTRYAG 4 cut(s) 582, 1782, 2715, 3060
BfrI CTTAAG 1 cut(s) 1714
BfuI GTATCC 1 cut(s) 2032
BglII AGATCT 2 cut(s) 1404, 2748
BisI GCNGC 9 cut(s) 498, 969, 1222, 2155, 2180, 2692, 3245, 3281, 3936
BlpI GCTNAGC 2 cut(s) 489, 3909
BlsI GCNGC 9 cut(s) 499, 970, 1223, 2156, 2181, 2693, 3246, 3282, 3937
BmcAI AGTACT 2 cut(s) 18, 1554
Bme1390I CCNGG 9 cut(s) 261, 812, 1496, 2151, 2333, 2447, 2755, 3424, 3836
Bme18I GGWCC 2 cut(s) 2449, 3472
BmgBI CACGTC 1 cut(s) 1280
BmgT120I GGNCC 5 cut(s) 1019, 1492, 1613, 2449, 3472
BmiI GGNNCC 4 cut(s) 265, 1494, 3582, 3728
BmrFI CCNGG 9 cut(s) 261, 812, 1496, 2151, 2333, 2447, 2755, 3424, 3836
BmrI ACTGGG 3 cut(s) 1016, 1584, 2445
BmsI GCATC 8 cut(s) 1296, 1744, 2145, 2314, 2353, 2470, 2855, 3797
BmtI GCTAGC 1 cut(s) 1371
BmuI ACTGGG 3 cut(s) 1016, 1584, 2445
BpiI GAAGAC 7 cut(s) 606, 823, 1770, 2206, 2825, 3423, 3846
Bpu10I CCTNAGC 1 cut(s) 930
Bpu1102I GCTNAGC 2 cut(s) 489, 3909
BpuEI CTTGAG 4 cut(s) 1583, 2159, 2207, 3671
BpuMI CCSGG 5 cut(s) 261, 1496, 2447, 2755, 3424
BsaBI GATNNNNATC 1 cut(s) 785
BsaJI CCNNGG 4 cut(s) 811, 1494, 1928, 4013
BsaWI WCCGGW 2 cut(s) 2528, 3583
BsaXI ACNNNNNCTCC 2 cut(s) 1264, 1294
Bsc4I CCNNNNNNNGG 2 cut(s) 3481, 3736
Bse1I ACTGG 9 cut(s) 14, 519, 535, 1022, 1579, 1594, 1689, 2440, 2575
Bse3DI GCAATG 3 cut(s) 300, 3466, 3600
Bse8I GATNNNNATC 1 cut(s) 785
BseAI TCCGGA 2 cut(s) 2528, 3583
BseBI CCWGG 4 cut(s) 812, 2151, 2333, 3836
BseDI CCNNGG 4 cut(s) 811, 1494, 1928, 4013
BseJI GATNNNNATC 1 cut(s) 785
BseLI CCNNNNNNNGG 2 cut(s) 3481, 3736
BseMI GCAATG 3 cut(s) 300, 3466, 3600
BseNI ACTGG 9 cut(s) 14, 519, 535, 1022, 1579, 1594, 1689, 2440, 2575
BseRI GAGGAG 5 cut(s) 359, 2538, 2686, 3203, 3287
BseSI GKGCMC 2 cut(s) 581, 2624
BseXI GCAGC 7 cut(s) 980, 1233, 2166, 2191, 2678, 3267, 3947
BseYI CCCAGC 1 cut(s) 3455
BsgI GTGCAG 3 cut(s) 593, 2121, 2904
Bsh1236I CGCG 2 cut(s) 1257, 3788
BshFI GGCC 6 cut(s) 1020, 1493, 1615, 1768, 3488, 3990
BsiHKAI GWGCWC 3 cut(s) 581, 2297, 2624
BsiSI CCGG 8 cut(s) 261, 1156, 1496, 2447, 2529, 2755, 3424, 3584
BslFI GGGAC 3 cut(s) 1489, 1527, 2958
BslI CCNNNNNNNGG 2 cut(s) 3481, 3736
BsmAI GTCTC 7 cut(s) 449, 664, 1350, 1820, 2541, 2622, 2637
BsmFI GGGAC 3 cut(s) 1489, 1527, 2958
BsnI GGCC 6 cut(s) 1020, 1493, 1615, 1768, 3488, 3990
Bsp1286I GDGCHC 3 cut(s) 581, 2297, 2624
Bsp13I TCCGGA 2 cut(s) 2528, 3583
Bsp1407I TGTACA 1 cut(s) 189
Bsp1720I GCTNAGC 2 cut(s) 489, 3909
BspACI CCGC 6 cut(s) 332, 497, 1836, 2850, 3244, 3786
BspANI GGCC 6 cut(s) 1020, 1493, 1615, 1768, 3488, 3990
BspEI TCCGGA 2 cut(s) 2528, 3583
BspFNI CGCG 2 cut(s) 1257, 3788
BspHI TCATGA 3 cut(s) 271, 2061, 3412
BspLI GGNNCC 4 cut(s) 265, 1494, 3582, 3728
BspMAI CTGCAG 1 cut(s) 1786
BspOI GCTAGC 1 cut(s) 1371
BspPI GGATC 7 cut(s) 251, 1436, 1670, 1694, 2099, 2685, 3758
BspTI CTTAAG 1 cut(s) 1714
BsrDI GCAATG 3 cut(s) 300, 3466, 3600
BsrGI TGTACA 1 cut(s) 189
BsrI ACTGG 9 cut(s) 14, 519, 535, 1022, 1579, 1594, 1689, 2440, 2575
BssECI CCNNGG 4 cut(s) 811, 1494, 1928, 4013
BssT1I CCWWGG 1 cut(s) 4013
Bst2UI CCWGG 4 cut(s) 812, 2151, 2333, 3836
Bst6I CTCTTC 1 cut(s) 2925
BstAFI CTTAAG 1 cut(s) 1714
BstAPI GCANNNNNTGC 1 cut(s) 3932
BstAUI TGTACA 1 cut(s) 189
BstC8I GCNNGC 8 cut(s) 495, 808, 1369, 1836, 2329, 2945, 3345, 3812
BstENI CCTNNNNNAGG 1 cut(s) 3734
BstFNI CGCG 2 cut(s) 1257, 3788
BstHHI GCGC 3 cut(s) 292, 363, 1259
BstMAI GTCTC 7 cut(s) 449, 664, 1350, 1820, 2541, 2622, 2637
BstMWI GCNNNNNNNGC 6 cut(s) 494, 746, 1256, 1460, 3820, 3932
BstNI CCWGG 4 cut(s) 812, 2151, 2333, 3836
BstSCI CCNGG 9 cut(s) 259, 810, 1494, 2149, 2331, 2445, 2753, 3422, 3834
BstSFI CTRYAG 4 cut(s) 582, 1782, 2715, 3060
BstSLI GKGCMC 2 cut(s) 581, 2624
BstUI CGCG 2 cut(s) 1257, 3788
BstV1I GCAGC 7 cut(s) 980, 1233, 2166, 2191, 2678, 3267, 3947
BstV2I GAAGAC 7 cut(s) 606, 823, 1770, 2206, 2825, 3423, 3846
BstX2I RGATCY 6 cut(s) 1404, 1428, 2104, 2677, 2748, 3763
BstYI RGATCY 6 cut(s) 1404, 1428, 2104, 2677, 2748, 3763
BsuI GTATCC 1 cut(s) 2032
BsuRI GGCC 6 cut(s) 1020, 1493, 1615, 1768, 3488, 3990
BtgZI GCGATG 1 cut(s) 3199
BtrI CACGTC 1 cut(s) 1280
BtsI GCAGTG 1 cut(s) 581
BtsIMutI CAGTG 8 cut(s) 512, 528, 581, 1587, 1682, 2624, 2976, 3690
Cac8I GCNNGC 8 cut(s) 495, 808, 1369, 1836, 2329, 2945, 3345, 3812
CaiI CAGNNNCTG 1 cut(s) 443
CciI TCATGA 3 cut(s) 271, 2061, 3412
CfoI GCGC 3 cut(s) 292, 363, 1259
Cfr13I GGNCC 5 cut(s) 1019, 1492, 1613, 2449, 3472
CseI GACGC 2 cut(s) 481, 929
DraI TTTAAA 2 cut(s) 3196, 3450
DrdI GACNNNNNNGTC 1 cut(s) 678
DseDI GACNNNNNNGTC 1 cut(s) 678
EaeI YGGCCR 1 cut(s) 3486
Eam1104I CTCTTC 1 cut(s) 2925
EarI CTCTTC 1 cut(s) 2925
Ecl136II GAGCTC 1 cut(s) 2295
Eco130I CCWWGG 1 cut(s) 4013
Eco24I GRGCYC 1 cut(s) 2297
Eco32I GATATC 1 cut(s) 1721
Eco47I GGWCC 2 cut(s) 2449, 3472
Eco53kI GAGCTC 1 cut(s) 2295
Eco57I CTGAAG 4 cut(s) 756, 1121, 3000, 3867
EcoICRI GAGCTC 1 cut(s) 2295
EcoNI CCTNNNNNAGG 1 cut(s) 3734
EcoRI GAATTC 2 cut(s) 1103, 1709
EcoRII CCWGG 4 cut(s) 810, 2149, 2331, 3834
EcoRV GATATC 1 cut(s) 1721
EcoT14I CCWWGG 1 cut(s) 4013
EcoT22I ATGCAT 5 cut(s) 1636, 2368, 3724, 3812, 3816
EcoT38I GRGCYC 1 cut(s) 2297
ErhI CCWWGG 1 cut(s) 4013
FaqI GGGAC 3 cut(s) 1489, 1527, 2958
FauI CCCGC 1 cut(s) 1843
FauNDI CATATG 3 cut(s) 311, 3568, 3718
FbaI TGATCA 1 cut(s) 780
FblI GTMKAC 1 cut(s) 3965
Fnu4HI GCNGC 9 cut(s) 498, 969, 1222, 2155, 2180, 2692, 3245, 3281, 3936
FriOI GRGCYC 1 cut(s) 2297
Fsp4HI GCNGC 9 cut(s) 498, 969, 1222, 2155, 2180, 2692, 3245, 3281, 3936
FspBI CTAG 8 cut(s) 1368, 1617, 2247, 2358, 2870, 3239, 3710, 3972
GlaI GCGC 3 cut(s) 291, 362, 1258
GluI GCNGC 9 cut(s) 498, 969, 1222, 2155, 2180, 2692, 3245, 3281, 3936
GsaI CCCAGC 1 cut(s) 3459
HaeIII GGCC 6 cut(s) 1020, 1493, 1615, 1768, 3488, 3990
HapII CCGG 8 cut(s) 261, 1156, 1496, 2447, 2529, 2755, 3424, 3584
HgaI GACGC 2 cut(s) 481, 929
HhaI GCGC 3 cut(s) 292, 363, 1259
Hin6I GCGC 3 cut(s) 290, 361, 1257
HinP1I GCGC 3 cut(s) 290, 361, 1257
HincII GTYRAC 2 cut(s) 356, 2923
HindII GTYRAC 2 cut(s) 356, 2923
HindIII AAGCTT 4 cut(s) 738, 998, 3086, 3221
HpaII CCGG 8 cut(s) 261, 1156, 1496, 2447, 2529, 2755, 3424, 3584
HphI GGTGA 4 cut(s) 545, 2507, 2585, 3022
Hpy99I CGWCG 1 cut(s) 2901
HpyCH4IV ACGT 4 cut(s) 125, 731, 1279, 1609
HpyF10VI GCNNNNNNNGC 6 cut(s) 494, 746, 1256, 1460, 3820, 3932
HpySE526I ACGT 4 cut(s) 125, 731, 1279, 1609
HspAI GCGC 3 cut(s) 290, 361, 1257
Kpn2I TCCGGA 2 cut(s) 2528, 3583
Ksp22I TGATCA 1 cut(s) 780
LmnI GCTCC 8 cut(s) 1087, 1272, 1666, 2187, 2300, 2699, 3586, 3955
Lsp1109I GCAGC 7 cut(s) 980, 1233, 2166, 2191, 2678, 3267, 3947
LweI GCATC 8 cut(s) 1296, 1744, 2145, 2314, 2353, 2470, 2855, 3797
MaeI CTAG 8 cut(s) 1368, 1617, 2247, 2358, 2870, 3239, 3710, 3972
MaeII ACGT 4 cut(s) 125, 731, 1279, 1609
MaeIII GTNAC 7 cut(s) 479, 1624, 1680, 2079, 2252, 2983, 3010
MfeI CAATTG 3 cut(s) 795, 2238, 3897
MflI RGATCY 6 cut(s) 1404, 1428, 2104, 2677, 2748, 3763
MhlI GDGCHC 3 cut(s) 581, 2297, 2624
MlsI TGGCCA 1 cut(s) 3488
MluNI TGGCCA 1 cut(s) 3488
MlyI GAGTC 6 cut(s) 1325, 2198, 2268, 2543, 3413, 3971
MmeI TCCRAC 3 cut(s) 1644, 2226, 3105
Mox20I TGGCCA 1 cut(s) 3488
Mph1103I ATGCAT 5 cut(s) 1636, 2368, 3724, 3812, 3816
MroI TCCGGA 2 cut(s) 2528, 3583
MscI TGGCCA 1 cut(s) 3488
MslI CAYNNNNRTG 3 cut(s) 284, 2706, 3721
Msp20I TGGCCA 1 cut(s) 3488
MspCI CTTAAG 1 cut(s) 1714
MspI CCGG 8 cut(s) 261, 1156, 1496, 2447, 2529, 2755, 3424, 3584
MspR9I CCNGG 9 cut(s) 261, 812, 1496, 2151, 2333, 2447, 2755, 3424, 3836
MunI CAATTG 3 cut(s) 795, 2238, 3897
MvaI CCWGG 4 cut(s) 812, 2151, 2333, 3836
MvnI CGCG 2 cut(s) 1257, 3788
MwoI GCNNNNNNNGC 6 cut(s) 494, 746, 1256, 1460, 3820, 3932
NciI CCSGG 5 cut(s) 261, 1496, 2447, 2755, 3424
NdeI CATATG 3 cut(s) 311, 3568, 3718
NheI GCTAGC 1 cut(s) 1367
NlaIV GGNNCC 4 cut(s) 265, 1494, 3582, 3728
NmuCI GTSAC 3 cut(s) 1680, 2252, 3010
NsiI ATGCAT 5 cut(s) 1636, 2368, 3724, 3812, 3816
PaeI GCATGC 2 cut(s) 810, 3814
PagI TCATGA 3 cut(s) 271, 2061, 3412
PciI ACATGT 2 cut(s) 237, 519
PflFI GACNNNGTC 1 cut(s) 2258
PflMI CCANNNNNTGG 1 cut(s) 3481
PfoI TCCNGGA 1 cut(s) 3834
PkrI GCNGC 9 cut(s) 499, 970, 1223, 2156, 2181, 2693, 3246, 3282, 3937
PleI GAGTC 6 cut(s) 1325, 2197, 2267, 2542, 3413, 3970
PpsI GAGTC 6 cut(s) 1325, 2197, 2267, 2542, 3413, 3970
PscI ACATGT 2 cut(s) 237, 519
PshBI ATTAAT 1 cut(s) 1899
Psp124BI GAGCTC 1 cut(s) 2297
Psp6I CCWGG 4 cut(s) 810, 2149, 2331, 3834
PspFI CCCAGC 1 cut(s) 3455
PspGI CCWGG 4 cut(s) 810, 2149, 2331, 3834
PspN4I GGNNCC 4 cut(s) 265, 1494, 3582, 3728
PspPI GGNCC 5 cut(s) 1019, 1492, 1613, 2449, 3472
PstI CTGCAG 1 cut(s) 1786
PstNI CAGNNNCTG 1 cut(s) 443
PsuI RGATCY 6 cut(s) 1404, 1428, 2104, 2677, 2748, 3763
PsyI GACNNNGTC 1 cut(s) 2258
RseI CAYNNNNRTG 3 cut(s) 284, 2706, 3721
SacI GAGCTC 1 cut(s) 2297
SatI GCNGC 9 cut(s) 498, 969, 1222, 2155, 2180, 2692, 3245, 3281, 3936
Sau96I GGNCC 5 cut(s) 1019, 1492, 1613, 2449, 3472
ScaI AGTACT 2 cut(s) 18, 1554
SchI GAGTC 6 cut(s) 1325, 2198, 2268, 2543, 3413, 3971
ScrFI CCNGG 9 cut(s) 261, 812, 1496, 2151, 2333, 2447, 2755, 3424, 3836
SduI GDGCHC 3 cut(s) 581, 2297, 2624
SfaNI GCATC 8 cut(s) 1296, 1744, 2145, 2314, 2353, 2470, 2855, 3797
SfcI CTRYAG 4 cut(s) 582, 1782, 2715, 3060
SinI GGWCC 2 cut(s) 2449, 3472
SmiMI CAYNNNNRTG 3 cut(s) 284, 2706, 3721
SmlI CTYRAG 5 cut(s) 1562, 1714, 2174, 2186, 3650
SmoI CTYRAG 5 cut(s) 1562, 1714, 2174, 2186, 3650
SpeI ACTAGT 1 cut(s) 3709
SphI GCATGC 2 cut(s) 810, 3814
SsiI CCGC 6 cut(s) 332, 497, 1836, 2850, 3244, 3786
SspI AATATT 1 cut(s) 433
SspMI CTAG 8 cut(s) 1368, 1617, 2247, 2358, 2870, 3239, 3710, 3972
SstI GAGCTC 1 cut(s) 2297
StyD4I CCNGG 9 cut(s) 259, 810, 1494, 2149, 2331, 2445, 2753, 3422, 3834
StyI CCWWGG 1 cut(s) 4013
TaiI ACGT 4 cut(s) 128, 734, 1282, 1612
TaqI TCGA 6 cut(s) 246, 453, 860, 1176, 1336, 2896
TaqII GACCGA 1 cut(s) 1920
TatI WGTACW 8 cut(s) 16, 189, 1036, 1552, 2875, 2950, 3294, 3463
TauI GCSGC 2 cut(s) 500, 3247
TscAI CASTG 8 cut(s) 519, 535, 581, 1594, 1689, 2624, 2983, 3697
TseFI GTSAC 3 cut(s) 1680, 2252, 3010
TseI GCWGC 7 cut(s) 968, 1221, 2154, 2179, 2691, 3280, 3935
Tsp45I GTSAC 3 cut(s) 1680, 2252, 3010
TspGWI ACGGA 2 cut(s) 1668, 2200
TspRI CASTG 8 cut(s) 519, 535, 581, 1594, 1689, 2624, 2983, 3697
Tth111I GACNNNGTC 1 cut(s) 2258
Van91I CCANNNNNTGG 1 cut(s) 3481
Vha464I CTTAAG 1 cut(s) 1714
VneI GTGCAC 2 cut(s) 577, 2620
VpaK11BI GGWCC 2 cut(s) 2449, 3472
VspI ATTAAT 1 cut(s) 1899
XagI CCTNNNNNAGG 1 cut(s) 3734
XapI RAATTY 8 cut(s) 376, 449, 882, 980, 1103, 1709, 3492, 3755
XbaI TCTAGA 1 cut(s) 2357
XmiI GTMKAC 1 cut(s) 3965
XspI CTAG 8 cut(s) 1368, 1617, 2247, 2358, 2870, 3239, 3710, 3972
ZrmI AGTACT 2 cut(s) 18, 1554
Zsp2I ATGCAT 5 cut(s) 1636, 2368, 3724, 3812, 3816
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.