Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0000635

Physical Location & Seq

Genomic Coordinates Forward (+)

2966725 .. 2969313

Gene Structure 2589 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000031208

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1818 bp

ATGTTTCGTTTTCCAGTACTGTTTTTGCTTTGTTCTGTCATCATCTCTCTCTTTTGTGATCTTGCTTATGCTGACCCTCCATATAAGCTATGCTCAAACACTTCCTACTATTCAGATAATAGTACGTTTCAGACAAACCTCAACACTTTGCTCAATTCATTACCTTCCAATGCTTCTGTTTCCAAGTTGTACAATACATCCTTTGGAAATGAGCCAGATAAAGTCTTCGCTCTCTACATGTGCCTCGACTATCTTGATCCCGGTTCCTGTCATGATTGCATAAACATGGCGCAACAAGACATTGCAAACATATGTCCTTACTCCAAAGAAGCGGTTGTATGGGAGGAGAACTGTCAACTGCACTACTCCAATCAGAATTTCTTTGGCAGATTGAATGTAGATGACAACATCCCCTTAGATAACAAGAAGAATATTTCAGTTCCTGAAAAATTCGAGACAGTTGTGAACAAGACGCTGAGTAACCTCGCTGAGCAGGCGGCTTTTAATCATTCACTGAACATGTATGCCACTGGTGAAGTACCCTTTCAACATAAAATGGTATATGCTCTTGTGCAGTGCACTACAGACTTATCCGGGGAAGACTGTGATATATGCCTTGTGAGAGCCATAGAAGATGTTTTAAGAGCGTTCTATTTCTCCATCGGTGCGAGACTTCTCAGTCGTAGTTGTTATCTTAGGTATGAGTTTTATCCCTTCTATGACGGGGCAACGTCTGAAGCTTCTACTGCTAATAACAAAGGAGGGAGGAAAATATGGTTGATCACAATCCTTACAATTGTATCAGCATGCCTGGGGGTACTACTTGTAGTCTCCTGTGTCTGTCTTGCAATGAGAAAATCGAAGAAAAAAGGTAATGGTTGTTCTGAATTTTACTTCAAACAGCTGACCCCTCTGGGTGTACTGAGGGATGGAAAGGAAGTGGCAATCAAGAGGCTTTCAAGCTATTCCGAGCAAGGTTTGGAGGAATTTACAAATGAGGTTTTACTGATAATGAAACTTCAGCATAAAAATCTTGTCCGGCTCTTAGGTTTCTGTACTGATGGAGAAGAAAAACTGCTTGTATATGAATACATGCCGAATAGCAGCTTAGATGTCATCCTCTTTGATTCAACGAAACGTGCACAACTTGATTGGAGCAGACGTGTAAGCATCATTAGTGGAATTGCAAGGGGAATACTTTATTTGCACGAGGACTCTCGACTTAGAATCATCCATAGAGACTTGAAAGCTAGCAATATATTATTGGACAATGAGATGAATCCAAAGATCTCAGATTTTGGCATGGCAAGGATCTTTGCAGGAAGTGAAGGACAAGCTAATACTGCTACAATAGTTGGGACTTATGGATATATGGCCCCAGAGTATGCTATGGAGGGACTATATTCTGTCAAGTCCGATGTTTATGGCTTTGGAGTACTCTTGCTTGAGATCATAACTGGGAGAAGGAACACTGGCTTTCATTTACTAAAACGTGCGCCTAGCCTCATAACTTATGCATGGAAATTATGGGATGAAGGAAAAGGGTTGGAGCTAATTGATCCGTCACTGGTTGGTTCATGTGATCCAGAAGAATTCTTAAGATATCTCCACATTGGTTTGCTGTGTGTTCAAGAAGATGCAAATGACAGGCCAACCATGTCTTCTGCAGTTGTAATGTTGAAAAGCGAAACTGTAAGTCTCACTCAACCTGAAAAACCCGCTTTCAACATGGGAAGATTCACTAATCAGCATACTGAGGGAGGTGCTGATAGTTGCTCAATTAATGGATTAACAGTTTCTAATATCATGCCTCGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0042742 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050896 GO:0051704 GO:0051707 GO:0071704 GO:0071944 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF3403 Pkinase Pkinase_Tyr Stress-antifung

Protein Analysis

606

Amino Acids

67.85

Weight (kDa)

5.62

Isoelectric Point (pI)

51.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Stress-antifung	PF01657	31 - 125	5.5e-21	Salt stress response/antifungal
Stress-antifung	PF01657	143 - 236	1.7e-12	Salt stress response/antifungal
Pkinase	PF00069	309 - 489	6.2e-39	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	311 - 555	1.4e-42	Protein tyrosine and serine/threonine kinase
DUF3403	PF11883	562 - 605	5.1e-06	Domain of unknown function (DUF3403)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000635)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g02731 FvH4_3g02732 FvH4_3g02732 FvH4_3g02732 FvH4_3g02751 FvH4_3g02752 FvH4_3g02770 FvH4_3g02770 FvH4_3g02770 FvH4_3g02771
malus_domestica	MD10G1249000.v1.1 MD10G1249100.v1.1 MD10G1313300.v1.1 MD10G1313400.v1.1 MD10G1313500.v1.1 MD10G1313600.v1.1 MD10G1313800.v1.1
prunus_persica	Prupe.4G027200_v2.0.a1 Prupe.6G140300_v2.0.a1 Prupe.6G140400_v2.0.a1 Prupe.6G140400_v2.0.a1
pyrus_communis	pycom10g26540 pycom10g26560 pycom10g26580 pycom10g26600
rosa_chinensis	RchiOBHm_Chr5g0004141 RchiOBHm_Chr5g0004151 RchiOBHm_Chr5g0004161
rosa_laevigata	RLG00000031205 RLG00000031206 RLG00000031208 RLG00000031209 RLG00000031210
rosa_multiflora	Rmu_co8256217.1_g000001 Rmu_co8309209.1_g000001 Rmu_sc0000547.1_g000034 Rmu_sc0004964.1_g000028 Rmu_sc0007868.1_g000001 Rmu_sc0010028.1_g000001 Rmu_sc0017938.1_g000001 Rmu_sc0027606.1_g000001 Rmu_sc0027892.1_g000001
rosa_roxburghii	Rroxscaffold_1G00071540 Rroxscaffold_1G00071550 Rroxscaffold_1G00071610 Rroxscaffold_1G00071620 Rroxscaffold_1G00071640 Rroxscaffold_1G00071650 Rroxscaffold_1G00071790 Rroxscaffold_1G00071800 Rroxscaffold_1G00071810 Rroxscaffold_1G00071850 Rroxscaffold_1G00071860 Rroxscaffold_1G00071880 Rroxscaffold_1G00071890
rosa_rugosa	Rorug04G0410500 Rorug04G0410500 Rorug04G0410500 Rorug04G0410600
rosa_samantha	Rh5AG037700 Rh5AG037800 Rh5AG037900 Rh5AG038000 Rh5BG037000 Rh5BG037100 Rh5BG037200 Rh5CG040400 Rh5CG040500 Rh5CG040600 Rh5CG040700 Rh5DG036400 Rh5DG036600 Rh5DG036800
rosa_wichuraiana	Rw5G003410 Rw5G003420 Rw5G003590 Rw5G003600 Rw5G003610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	678
AciI	CCGC	3 cut(s)	332, 497, 1719
AclWI	GGATC	4 cut(s)	251, 1319, 1553, 1577
AcsI	RAATTY	5 cut(s)	376, 449, 887, 986, 1592
AcuI	CTGAAG	2 cut(s)	756, 1004
AfaI	GTAC	8 cut(s)	18, 124, 191, 540, 819, 921, 1057, 1437
AflII	CTTAAG	1 cut(s)	1597
AflIII	ACRYGT	3 cut(s)	237, 519, 1162
AgsI	TTSAA	9 cut(s)	394, 548, 898, 960, 1131, 1246, 1631, 1681, 1726
AjiI	CACGTC	1 cut(s)	1163
AjnI	CCWGG	1 cut(s)	810
AjuI	GAANNNNNNNTTGG	4 cut(s)	362, 394, 1645, 1677
AluBI	AGCT	8 cut(s)	88, 740, 904, 963, 1107, 1250, 1337, 1552
AluI	AGCT	8 cut(s)	88, 740, 904, 963, 1107, 1250, 1337, 1552
Alw21I	GWGCWC	2 cut(s)	581, 1144
Alw26I	GTCTC	5 cut(s)	449, 664, 835, 1233, 1703
Alw44I	GTGCAC	2 cut(s)	577, 1140
AlwI	GGATC	4 cut(s)	251, 1319, 1553, 1577
AlwNI	CAGNNNCTG	1 cut(s)	443
AoxI	GGCC	2 cut(s)	1374, 1649
ApaLI	GTGCAC	2 cut(s)	577, 1140
ApeKI	GCWGC	1 cut(s)	1104
ApoI	RAATTY	5 cut(s)	376, 449, 887, 986, 1592
AseI	ATTAAT	1 cut(s)	1782
AspLEI	GCGC	2 cut(s)	292, 1498
AspS9I	GGNCC	1 cut(s)	1375
AsuC2I	CCSGG	2 cut(s)	261, 595
AsuHPI	GGTGA	1 cut(s)	545
AsuNHI	GCTAGC	1 cut(s)	1250
BaeGI	GKGCMC	2 cut(s)	581, 1144
BaeI	ACNNNNGTAYC	2 cut(s)	783, 816
BauI	CACGAG	1 cut(s)	1208
BbsI	GAAGAC	3 cut(s)	217, 606, 1653
Bbv12I	GWGCWC	2 cut(s)	581, 1144
BbvI	GCAGC	1 cut(s)	1116
BccI	CCATC	3 cut(s)	668, 923, 1055
BciT130I	CCWGG	1 cut(s)	812
BclI	TGATCA	1 cut(s)	780
BcnI	CCSGG	2 cut(s)	261, 595
BcoDI	GTCTC	5 cut(s)	449, 664, 835, 1233, 1703
BfaI	CTAG	2 cut(s)	1251, 1500
BfmI	CTRYAG	2 cut(s)	582, 1665
BfrI	CTTAAG	1 cut(s)	1597
BglII	AGATCT	1 cut(s)	1287
BisI	GCNGC	2 cut(s)	498, 1105
BlpI	GCTNAGC	1 cut(s)	489
BlsI	GCNGC	2 cut(s)	499, 1106
BmcAI	AGTACT	2 cut(s)	18, 1437
Bme1390I	CCNGG	3 cut(s)	261, 595, 812
BmgBI	CACGTC	1 cut(s)	1163
BmgT120I	GGNCC	1 cut(s)	1375
BmiI	GGNNCC	2 cut(s)	265, 1377
BmrFI	CCNGG	3 cut(s)	261, 595, 812
BmrI	ACTGGG	1 cut(s)	1467
BmsI	GCATC	2 cut(s)	1179, 1627
BmtI	GCTAGC	1 cut(s)	1254
BmuI	ACTGGG	1 cut(s)	1467
BpiI	GAAGAC	3 cut(s)	217, 606, 1653
Bpu1102I	GCTNAGC	1 cut(s)	489
BpuEI	CTTGAG	1 cut(s)	1466
BpuMI	CCSGG	2 cut(s)	261, 595
BsaBI	GATNNNNATC	1 cut(s)	785
BsaJI	CCNNGG	3 cut(s)	594, 811, 1811
BsaXI	ACNNNNNCTCC	2 cut(s)	1147, 1177
Bse1I	ACTGG	5 cut(s)	14, 535, 1462, 1477, 1572
Bse3DI	GCAATG	2 cut(s)	300, 855
Bse8I	GATNNNNATC	1 cut(s)	785
BseBI	CCWGG	1 cut(s)	812
BseDI	CCNNGG	3 cut(s)	594, 811, 1811
BseGI	GGATG	6 cut(s)	197, 408, 934, 1116, 1230, 1537
BseJI	GATNNNNATC	1 cut(s)	785
BseMI	GCAATG	2 cut(s)	300, 855
BseMII	CTCAG	6 cut(s)	467, 480, 691, 914, 1305, 1746
BseNI	ACTGG	5 cut(s)	14, 535, 1462, 1477, 1572
BseRI	GAGGAG	1 cut(s)	359
BseSI	GKGCMC	2 cut(s)	581, 1144
BseXI	GCAGC	1 cut(s)	1116
BsgI	GTGCAG	2 cut(s)	344, 593
BshFI	GGCC	2 cut(s)	1376, 1651
BsiHKAI	GWGCWC	2 cut(s)	581, 1144
BsiSI	CCGG	3 cut(s)	261, 594, 1039
BslFI	GGGAC	2 cut(s)	1372, 1410
BsmAI	GTCTC	5 cut(s)	449, 664, 835, 1233, 1703
BsmFI	GGGAC	2 cut(s)	1372, 1410
BsnI	GGCC	2 cut(s)	1376, 1651
Bsp1286I	GDGCHC	2 cut(s)	581, 1144
Bsp1407I	TGTACA	1 cut(s)	189
Bsp143I	GATC	8 cut(s)	58, 256, 780, 1287, 1311, 1449, 1558, 1582
Bsp1720I	GCTNAGC	1 cut(s)	489
BspACI	CCGC	3 cut(s)	332, 497, 1719
BspANI	GGCC	2 cut(s)	1376, 1651
BspCNI	CTCAG	6 cut(s)	468, 481, 690, 915, 1304, 1747
BspHI	TCATGA	1 cut(s)	271
BspLI	GGNNCC	2 cut(s)	265, 1377
BspMAI	CTGCAG	1 cut(s)	1669
BspOI	GCTAGC	1 cut(s)	1254
BspPI	GGATC	4 cut(s)	251, 1319, 1553, 1577
BspTI	CTTAAG	1 cut(s)	1597
BsrDI	GCAATG	2 cut(s)	300, 855
BsrGI	TGTACA	1 cut(s)	189
BsrI	ACTGG	5 cut(s)	14, 535, 1462, 1477, 1572
BssECI	CCNNGG	3 cut(s)	594, 811, 1811
BssMI	GATC	8 cut(s)	58, 256, 780, 1287, 1311, 1449, 1558, 1582
BssSI	CACGAG	1 cut(s)	1208
Bst2BI	CACGAG	1 cut(s)	1208
Bst2UI	CCWGG	1 cut(s)	812
Bst4CI	ACNGT	6 cut(s)	21, 353, 460, 605, 1693, 1795
BstAFI	CTTAAG	1 cut(s)	1597
BstAUI	TGTACA	1 cut(s)	189
BstC8I	GCNNGC	3 cut(s)	495, 808, 1252
BstF5I	GGATG	6 cut(s)	197, 408, 934, 1116, 1230, 1537
BstHHI	GCGC	2 cut(s)	292, 1498
BstKTI	GATC	8 cut(s)	61, 259, 783, 1290, 1314, 1452, 1561, 1585
BstMAI	GTCTC	5 cut(s)	449, 664, 835, 1233, 1703
BstMBI	GATC	8 cut(s)	58, 256, 780, 1287, 1311, 1449, 1558, 1582
BstMWI	GCNNNNNNNGC	3 cut(s)	494, 746, 1343
BstNI	CCWGG	1 cut(s)	812
BstNSI	RCATGY	4 cut(s)	241, 523, 810, 1096
BstSCI	CCNGG	3 cut(s)	259, 593, 810
BstSFI	CTRYAG	2 cut(s)	582, 1665
BstSLI	GKGCMC	2 cut(s)	581, 1144
BstV1I	GCAGC	1 cut(s)	1116
BstV2I	GAAGAC	3 cut(s)	217, 606, 1653
BstX2I	RGATCY	2 cut(s)	1287, 1311
BstYI	RGATCY	2 cut(s)	1287, 1311
BsuRI	GGCC	2 cut(s)	1376, 1651
BtrI	CACGTC	1 cut(s)	1163
BtsCI	GGATG	6 cut(s)	197, 408, 934, 1116, 1230, 1537
BtsI	GCAGTG	1 cut(s)	581
BtsIMutI	CAGTG	5 cut(s)	512, 528, 581, 1470, 1565
Cac8I	GCNNGC	3 cut(s)	495, 808, 1252
CaiI	CAGNNNCTG	1 cut(s)	443
CciI	TCATGA	1 cut(s)	271
CfoI	GCGC	2 cut(s)	292, 1498
Cfr13I	GGNCC	1 cut(s)	1375
CseI	GACGC	1 cut(s)	481
Csp6I	GTAC	8 cut(s)	17, 123, 190, 539, 818, 920, 1056, 1436
CviQI	GTAC	8 cut(s)	17, 123, 190, 539, 818, 920, 1056, 1436
DpnI	GATC	8 cut(s)	60, 258, 782, 1289, 1313, 1451, 1560, 1584
DpnII	GATC	8 cut(s)	58, 256, 780, 1287, 1311, 1449, 1558, 1582
DrdI	GACNNNNNNGTC	1 cut(s)	678
DseDI	GACNNNNNNGTC	1 cut(s)	678
Eco32I	GATATC	1 cut(s)	1604
Eco57I	CTGAAG	2 cut(s)	756, 1004
EcoRI	GAATTC	1 cut(s)	1592
EcoRII	CCWGG	1 cut(s)	810
EcoRV	GATATC	1 cut(s)	1604
EcoT22I	ATGCAT	1 cut(s)	1519
FaqI	GGGAC	2 cut(s)	1372, 1410
FauI	CCCGC	1 cut(s)	1726
FauNDI	CATATG	1 cut(s)	311
FbaI	TGATCA	1 cut(s)	780
Fnu4HI	GCNGC	2 cut(s)	498, 1105
FokI	GGATG	6 cut(s)	184, 395, 941, 1103, 1217, 1544
Fsp4HI	GCNGC	2 cut(s)	498, 1105
FspBI	CTAG	2 cut(s)	1251, 1500
GlaI	GCGC	2 cut(s)	291, 1497
GluI	GCNGC	2 cut(s)	498, 1105
HaeIII	GGCC	2 cut(s)	1376, 1651
HapII	CCGG	3 cut(s)	261, 594, 1039
HgaI	GACGC	1 cut(s)	481
HhaI	GCGC	2 cut(s)	292, 1498
Hin6I	GCGC	2 cut(s)	290, 1496
HinP1I	GCGC	2 cut(s)	290, 1496
HincII	GTYRAC	1 cut(s)	356
HindII	GTYRAC	1 cut(s)	356
HindIII	AAGCTT	1 cut(s)	738
HinfI	GANTC	5 cut(s)	1127, 1214, 1227, 1279, 1737
HpaII	CCGG	3 cut(s)	261, 594, 1039
HphI	GGTGA	1 cut(s)	545
Hpy166II	GTNNAC	5 cut(s)	356, 466, 579, 920, 1142
Hpy188I	TCNGA	8 cut(s)	115, 132, 375, 736, 886, 970, 1294, 1417
Hpy188III	TCNNGA	8 cut(s)	254, 272, 443, 454, 949, 1218, 1586, 1631
Hpy8I	GTNNAC	5 cut(s)	356, 466, 579, 920, 1142
HpyAV	CCTTC	5 cut(s)	174, 724, 1322, 1458, 1529
HpyCH4III	ACNGT	6 cut(s)	21, 353, 460, 605, 1693, 1795
HpyCH4IV	ACGT	5 cut(s)	125, 731, 1138, 1162, 1492
HpyF10VI	GCNNNNNNNGC	3 cut(s)	494, 746, 1343
HpySE526I	ACGT	5 cut(s)	125, 731, 1138, 1162, 1492
HspAI	GCGC	2 cut(s)	290, 1496
Ksp22I	TGATCA	1 cut(s)	780
Kzo9I	GATC	8 cut(s)	58, 256, 780, 1287, 1311, 1449, 1558, 1582
LmnI	GCTCC	2 cut(s)	1155, 1549
Lsp1109I	GCAGC	1 cut(s)	1116
LweI	GCATC	2 cut(s)	1179, 1627
MaeI	CTAG	2 cut(s)	1251, 1500
MaeII	ACGT	5 cut(s)	125, 731, 1138, 1162, 1492
MaeIII	GTNAC	2 cut(s)	479, 1563
MalI	GATC	8 cut(s)	60, 258, 782, 1289, 1313, 1451, 1560, 1584
MboI	GATC	8 cut(s)	58, 256, 780, 1287, 1311, 1449, 1558, 1582
MfeI	CAATTG	1 cut(s)	795
MflI	RGATCY	2 cut(s)	1287, 1311
MhlI	GDGCHC	2 cut(s)	581, 1144
MlyI	GAGTC	1 cut(s)	1208
MmeI	TCCRAC	1 cut(s)	1527
Mph1103I	ATGCAT	1 cut(s)	1519
MseI	TTAA	5 cut(s)	504, 641, 1598, 1782, 1790
MslI	CAYNNNNRTG	1 cut(s)	284
MspA1I	CMGCKG	1 cut(s)	904
MspCI	CTTAAG	1 cut(s)	1597
MspI	CCGG	3 cut(s)	261, 594, 1039
MspR9I	CCNGG	3 cut(s)	261, 595, 812
MunI	CAATTG	1 cut(s)	795
MvaI	CCWGG	1 cut(s)	812
MwoI	GCNNNNNNNGC	3 cut(s)	494, 746, 1343
NciI	CCSGG	2 cut(s)	261, 595
NdeI	CATATG	1 cut(s)	311
NdeII	GATC	8 cut(s)	58, 256, 780, 1287, 1311, 1449, 1558, 1582
NheI	GCTAGC	1 cut(s)	1250
NlaIV	GGNNCC	2 cut(s)	265, 1377
NmuCI	GTSAC	1 cut(s)	1563
NsiI	ATGCAT	1 cut(s)	1519
NspI	RCATGY	4 cut(s)	241, 523, 810, 1096
PaeI	GCATGC	1 cut(s)	810
PagI	TCATGA	1 cut(s)	271
PciI	ACATGT	2 cut(s)	237, 519
PfeI	GAWTC	4 cut(s)	1127, 1227, 1279, 1737
PkrI	GCNGC	2 cut(s)	499, 1106
PleI	GAGTC	1 cut(s)	1208
PpsI	GAGTC	1 cut(s)	1208
PscI	ACATGT	2 cut(s)	237, 519
PshBI	ATTAAT	1 cut(s)	1782
Psp6I	CCWGG	1 cut(s)	810
PspGI	CCWGG	1 cut(s)	810
PspN4I	GGNNCC	2 cut(s)	265, 1377
PspPI	GGNCC	1 cut(s)	1375
PsrI	GAACNNNNNNTAC	2 cut(s)	865, 897
PstI	CTGCAG	1 cut(s)	1669
PstNI	CAGNNNCTG	1 cut(s)	443
PsuI	RGATCY	2 cut(s)	1287, 1311
PvuII	CAGCTG	1 cut(s)	904
RsaI	GTAC	8 cut(s)	18, 124, 191, 540, 819, 921, 1057, 1437
RsaNI	GTAC	8 cut(s)	17, 123, 190, 539, 818, 920, 1056, 1436
RseI	CAYNNNNRTG	1 cut(s)	284
SaqAI	TTAA	5 cut(s)	504, 641, 1598, 1782, 1790
SatI	GCNGC	2 cut(s)	498, 1105
Sau3AI	GATC	8 cut(s)	58, 256, 780, 1287, 1311, 1449, 1558, 1582
Sau96I	GGNCC	1 cut(s)	1375
ScaI	AGTACT	2 cut(s)	18, 1437
SchI	GAGTC	1 cut(s)	1208
ScrFI	CCNGG	3 cut(s)	261, 595, 812
SduI	GDGCHC	2 cut(s)	581, 1144
SfaNI	GCATC	2 cut(s)	1179, 1627
SfcI	CTRYAG	2 cut(s)	582, 1665
SmiMI	CAYNNNNRTG	1 cut(s)	284
SmlI	CTYRAG	2 cut(s)	1445, 1597
SmoI	CTYRAG	2 cut(s)	1445, 1597
SphI	GCATGC	1 cut(s)	810
SsiI	CCGC	3 cut(s)	332, 497, 1719
SspI	AATATT	1 cut(s)	433
SspMI	CTAG	2 cut(s)	1251, 1500
StyD4I	CCNGG	3 cut(s)	259, 593, 810
TaaI	ACNGT	6 cut(s)	21, 353, 460, 605, 1693, 1795
TaiI	ACGT	5 cut(s)	128, 734, 1141, 1165, 1495
TaqI	TCGA	4 cut(s)	246, 453, 860, 1219
TatI	WGTACW	5 cut(s)	16, 189, 919, 1055, 1435
TauI	GCSGC	1 cut(s)	500
TfiI	GAWTC	4 cut(s)	1127, 1227, 1279, 1737
Tru1I	TTAA	5 cut(s)	504, 641, 1598, 1782, 1790
Tru9I	TTAA	5 cut(s)	504, 641, 1598, 1782, 1790
TscAI	CASTG	5 cut(s)	519, 535, 581, 1477, 1572
TseFI	GTSAC	1 cut(s)	1563
TseI	GCWGC	1 cut(s)	1104
Tsp45I	GTSAC	1 cut(s)	1563
TspDTI	ATGAA	7 cut(s)	147, 1028, 1101, 1292, 1469, 1548, 1566
TspGWI	ACGGA	1 cut(s)	1551
TspRI	CASTG	5 cut(s)	519, 535, 581, 1477, 1572
Vha464I	CTTAAG	1 cut(s)	1597
VneI	GTGCAC	2 cut(s)	577, 1140
VspI	ATTAAT	1 cut(s)	1782
XapI	RAATTY	5 cut(s)	376, 449, 887, 986, 1592
XceI	RCATGY	4 cut(s)	241, 523, 810, 1096
XspI	CTAG	2 cut(s)	1251, 1500
ZrmI	AGTACT	2 cut(s)	18, 1437
Zsp2I	ATGCAT	1 cut(s)	1519

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.