Rmu_sc0027606.1_g000001

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0027606.1
Physical Location & Seq
Reverse (-)
2 .. 2089
2088 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0027606.1_g000001.1.cds

Sequence Viewer

Length: 1450 bp
atgtcttatactgggaagtacccggcccagaatgatcaggaagagagtgtatcagattcaaattattttggtgacgttttaatgtatttaatgaacaacctctccggagagtctgtgtttactcctccaaagaaaatgtttgcaactggtgaaattgagctttcgggaaatagaattgtttatggtctggaacagtgcaccagagacatctctgaaagtgactgcaaaaactgtctggtttctgctttaggggatctttcatcatgctgctcctttcgtcaaggtggaactgtagtcagtagaaattgtaatgtgaggtttgagatctcccggttttttaatgacacttcaagcagtcggttaatttatccatattcaaaaggaggggatgacaggaagacttggaaggtggtggttacatgtgcatccgctatactatttgcagttctagctgtactttgtgcagttcattttcgacggcaaaagagattgaaaaatgtcaacgatgaagagatcagaagcgagcatgtactattacatgatctggcaagtcccactgaagtaacaattacagaagaaggcgtattggtgacttctgaggaactgccattcgttgatgtagcaactataaaaatagctacagatgacttttcagattccaacaagcttggacaaggtgggtttggtactgtttacaagggtgtgctaccagatgggagagaagtagctgttaaaagattgtcaaggaagtcatggcaaggcttagaggagtttaaaaacgaagtcatactcatcgcaaagcttcaacacagaaacctagtgcggctgttggcatgtggctttgaaggagaggagaagctgcttttgtatgagtacatgccaaataaaagccttgatactttcatctttgattcgcaaaagcgtgctgaactttgttgggaaacatatcacaacatcattaaaggaatcgcgagaggacttctgtatcttcacgaagactcccggctcagaatcattcacagagatttaaagcccagcaatgtacttttggaccatgaaatggtggccaaaatttcagattttggcatggcaaggatattttgtgaaaatcagaacacagctaatactaaaagagttgtaggaacatatggctacatggctccggagtatgcaatggagggtctattttctataaaatctgatgttttcagctttggagtaatcatgcttgagattattagtgggaaaaaaaatagtggattctacctcactgaacatgccaagacactcgttgcatatgcatggaacctatggaaggatggaaaagaagttgaatttgtagatccttgcttgatggaatcatccgcgacaaaagagattttgagatgcatgcatatcgggcttttgtgtgtccaggaagaccctgaagaaagaccaacaatgtcaaatg

Protein Analysis

483

Amino Acids

54.54

Weight (kDa)

5.63

Isoelectric Point (pI)

51.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000635)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g02731 FvH4_3g02732 FvH4_3g02732 FvH4_3g02732 FvH4_3g02751 FvH4_3g02752 FvH4_3g02770 FvH4_3g02770 FvH4_3g02770 FvH4_3g02771
malus_domestica MD10G1249000.v1.1 MD10G1249100.v1.1 MD10G1313300.v1.1 MD10G1313400.v1.1 MD10G1313500.v1.1 MD10G1313600.v1.1 MD10G1313800.v1.1
prunus_persica Prupe.4G027200_v2.0.a1 Prupe.6G140300_v2.0.a1 Prupe.6G140400_v2.0.a1 Prupe.6G140400_v2.0.a1
pyrus_communis pycom10g26540 pycom10g26560 pycom10g26580 pycom10g26600
rosa_chinensis RchiOBHm_Chr5g0004141 RchiOBHm_Chr5g0004151 RchiOBHm_Chr5g0004161
rosa_laevigata RLG00000031205 RLG00000031206 RLG00000031208 RLG00000031209 RLG00000031210
rosa_multiflora Rmu_co8256217.1_g000001 Rmu_co8309209.1_g000001 Rmu_sc0000547.1_g000034 Rmu_sc0004964.1_g000028 Rmu_sc0007868.1_g000001 Rmu_sc0010028.1_g000001 Rmu_sc0017938.1_g000001 Rmu_sc0027606.1_g000001 Rmu_sc0027892.1_g000001
rosa_roxburghii Rroxscaffold_1G00071540 Rroxscaffold_1G00071550 Rroxscaffold_1G00071610 Rroxscaffold_1G00071620 Rroxscaffold_1G00071640 Rroxscaffold_1G00071650 Rroxscaffold_1G00071790 Rroxscaffold_1G00071800 Rroxscaffold_1G00071810 Rroxscaffold_1G00071850 Rroxscaffold_1G00071860 Rroxscaffold_1G00071880 Rroxscaffold_1G00071890
rosa_rugosa Rorug04G0410500 Rorug04G0410500 Rorug04G0410500 Rorug04G0410600
rosa_samantha Rh5AG037700 Rh5AG037800 Rh5AG037900 Rh5AG038000 Rh5BG037000 Rh5BG037100 Rh5BG037200 Rh5CG040400 Rh5CG040500 Rh5CG040600 Rh5CG040700 Rh5DG036400 Rh5DG036600 Rh5DG036800
rosa_wichuraiana Rw5G003410 Rw5G003420 Rw5G003590 Rw5G003600 Rw5G003610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1060
AccII CGCG 2 cut(s) 971, 1367
AccIII TCCGGA 2 cut(s) 104, 1162
AciI CCGC 3 cut(s) 429, 823, 1365
AclWI GGATC 2 cut(s) 261, 1337
AcoI YGGCCR 1 cut(s) 1065
AcsI RAATTY 2 cut(s) 1071, 1334
AcuI CTGAAG 2 cut(s) 579, 1446
AfaI GTAC 6 cut(s) 20, 456, 531, 688, 875, 1044
AfiI CCNNNNNNNGG 2 cut(s) 1060, 1315
AflIII ACRYGT 1 cut(s) 419
AgsI TTSAA 7 cut(s) 60, 351, 378, 493, 806, 845, 1334
AjnI CCWGG 1 cut(s) 1413
AloI GAACNNNNNNTCC 2 cut(s) 86, 118
AluBI AGCT 9 cut(s) 160, 452, 638, 667, 728, 802, 859, 1121, 1212
AluI AGCT 9 cut(s) 160, 452, 638, 667, 728, 802, 859, 1121, 1212
Alw21I GWGCWC 1 cut(s) 200
Alw26I GTCTC 1 cut(s) 198
Alw44I GTGCAC 1 cut(s) 196
AlwI GGATC 2 cut(s) 261, 1337
Aor13HI TCCGGA 2 cut(s) 104, 1162
AoxI GGCC 2 cut(s) 24, 1065
ApaLI GTGCAC 1 cut(s) 196
ApeKI GCWGC 2 cut(s) 267, 859
ApoI RAATTY 2 cut(s) 1071, 1334
AspS9I GGNCC 2 cut(s) 25, 1051
AsuC2I CCSGG 3 cut(s) 23, 331, 1003
AsuHPI GGTGA 3 cut(s) 83, 161, 601
AvaII GGWCC 1 cut(s) 1051
BaeGI GKGCMC 1 cut(s) 200
BaeI ACNNNNGTAYC 2 cut(s) 968, 1001
BalI TGGCCA 1 cut(s) 1067
BbsI GAAGAC 3 cut(s) 404, 1002, 1425
Bbv12I GWGCWC 1 cut(s) 200
BbvI GCAGC 2 cut(s) 254, 846
BccI CCATC 3 cut(s) 707, 1313, 1348
BceAI ACGGC 1 cut(s) 494
BcgI CGANNNNNNTGC 2 cut(s) 1378, 1412
BciT130I CCWGG 1 cut(s) 1415
BclI TGATCA 1 cut(s) 34
BcnI CCSGG 3 cut(s) 23, 331, 1003
BcoDI GTCTC 1 cut(s) 198
BfaI CTAG 2 cut(s) 449, 818
BfmI CTRYAG 2 cut(s) 291, 639
BglII AGATCT 1 cut(s) 324
BisI GCNGC 3 cut(s) 268, 824, 860
BlsI GCNGC 3 cut(s) 269, 825, 861
Bme1390I CCNGG 4 cut(s) 23, 331, 1003, 1415
Bme18I GGWCC 1 cut(s) 1051
BmgT120I GGNCC 2 cut(s) 25, 1051
BmiI GGNNCC 2 cut(s) 1161, 1307
BmrFI CCNGG 4 cut(s) 23, 331, 1003, 1415
BmrI ACTGGG 1 cut(s) 21
BmsI GCATC 2 cut(s) 434, 1376
BmuI ACTGGG 1 cut(s) 21
BpiI GAAGAC 3 cut(s) 404, 1002, 1425
BpuEI CTTGAG 1 cut(s) 1250
BpuMI CCSGG 3 cut(s) 23, 331, 1003
BsaWI WCCGGW 2 cut(s) 104, 1162
BsaXI ACNNNNNCTCC 6 cut(s) 86, 99, 116, 129, 983, 1013
Bsc4I CCNNNNNNNGG 2 cut(s) 1060, 1315
Bse1I ACTGG 2 cut(s) 16, 151
Bse3DI GCAATG 2 cut(s) 1045, 1179
BseAI TCCGGA 2 cut(s) 104, 1162
BseBI CCWGG 1 cut(s) 1415
BseGI GGATG 4 cut(s) 394, 425, 1324, 1361
BseLI CCNNNNNNNGG 2 cut(s) 1060, 1315
BseMI GCAATG 2 cut(s) 1045, 1179
BseMII CTCAG 2 cut(s) 588, 1021
BseNI ACTGG 2 cut(s) 16, 151
BseRI GAGGAG 3 cut(s) 114, 782, 866
BseSI GKGCMC 1 cut(s) 200
BseXI GCAGC 2 cut(s) 254, 846
BseYI CCCAGC 1 cut(s) 1034
BsgI GTGCAG 1 cut(s) 483
Bsh1236I CGCG 2 cut(s) 971, 1367
BshFI GGCC 2 cut(s) 26, 1067
BsiHKAI GWGCWC 1 cut(s) 200
BsiSI CCGG 5 cut(s) 23, 105, 331, 1003, 1163
BslFI GGGAC 1 cut(s) 537
BslI CCNNNNNNNGG 2 cut(s) 1060, 1315
BsmAI GTCTC 1 cut(s) 198
BsmFI GGGAC 1 cut(s) 537
BsnI GGCC 2 cut(s) 26, 1067
Bsp1286I GDGCHC 1 cut(s) 200
Bsp13I TCCGGA 2 cut(s) 104, 1162
Bsp143I GATC 6 cut(s) 34, 253, 324, 513, 541, 1342
Bsp68I TCGCGA 1 cut(s) 971
BspACI CCGC 3 cut(s) 429, 823, 1365
BspANI GGCC 2 cut(s) 26, 1067
BspCNI CTCAG 2 cut(s) 589, 1020
BspEI TCCGGA 2 cut(s) 104, 1162
BspFNI CGCG 2 cut(s) 971, 1367
BspLI GGNNCC 2 cut(s) 1161, 1307
BspPI GGATC 2 cut(s) 261, 1337
BsrDI GCAATG 2 cut(s) 1045, 1179
BsrI ACTGG 2 cut(s) 16, 151
BssMI GATC 6 cut(s) 34, 253, 324, 513, 541, 1342
Bst2UI CCWGG 1 cut(s) 1415
Bst4CI ACNGT 4 cut(s) 195, 233, 292, 691
Bst6I CTCTTC 2 cut(s) 36, 504
BstC8I GCNNGC 3 cut(s) 524, 924, 1391
BstDEI CTNAG 3 cut(s) 597, 763, 1007
BstENI CCTNNNNNAGG 1 cut(s) 1313
BstF5I GGATG 4 cut(s) 394, 425, 1324, 1361
BstFNI CGCG 2 cut(s) 971, 1367
BstKTI GATC 6 cut(s) 37, 256, 327, 516, 544, 1345
BstMAI GTCTC 1 cut(s) 198
BstMBI GATC 6 cut(s) 34, 253, 324, 513, 541, 1342
BstMWI GCNNNNNNNGC 2 cut(s) 449, 1399
BstNI CCWGG 1 cut(s) 1415
BstNSI RCATGY 6 cut(s) 423, 530, 837, 880, 1280, 1393
BstSCI CCNGG 4 cut(s) 21, 329, 1001, 1413
BstSFI CTRYAG 2 cut(s) 291, 639
BstSLI GKGCMC 1 cut(s) 200
BstUI CGCG 2 cut(s) 971, 1367
BstV1I GCAGC 2 cut(s) 254, 846
BstV2I GAAGAC 3 cut(s) 404, 1002, 1425
BstX2I RGATCY 3 cut(s) 253, 324, 1342
BstYI RGATCY 3 cut(s) 253, 324, 1342
BsuRI GGCC 2 cut(s) 26, 1067
BtgZI GCGATG 1 cut(s) 778
BtsCI GGATG 4 cut(s) 394, 425, 1324, 1361
BtsIMutI CAGTG 3 cut(s) 200, 555, 1269
BtuMI TCGCGA 1 cut(s) 971
Cac8I GCNNGC 3 cut(s) 524, 924, 1391
Cfr13I GGNCC 2 cut(s) 25, 1051
Csp6I GTAC 6 cut(s) 19, 455, 530, 687, 874, 1043
CviQI GTAC 6 cut(s) 19, 455, 530, 687, 874, 1043
DdeI CTNAG 3 cut(s) 597, 763, 1007
DpnI GATC 6 cut(s) 36, 255, 326, 515, 543, 1344
DpnII GATC 6 cut(s) 34, 253, 324, 513, 541, 1342
DraI TTTAAA 2 cut(s) 775, 1029
EaeI YGGCCR 1 cut(s) 1065
Eam1104I CTCTTC 2 cut(s) 36, 504
EarI CTCTTC 2 cut(s) 36, 504
Eco47I GGWCC 1 cut(s) 1051
Eco57I CTGAAG 2 cut(s) 579, 1446
EcoNI CCTNNNNNAGG 1 cut(s) 1313
EcoRII CCWGG 1 cut(s) 1413
EcoT22I ATGCAT 3 cut(s) 1303, 1391, 1395
FaqI GGGAC 1 cut(s) 537
FauNDI CATATG 2 cut(s) 1147, 1297
FbaI TGATCA 1 cut(s) 34
Fnu4HI GCNGC 3 cut(s) 268, 824, 860
FokI GGATG 4 cut(s) 401, 412, 1331, 1348
Fsp4HI GCNGC 3 cut(s) 268, 824, 860
FspBI CTAG 2 cut(s) 449, 818
GluI GCNGC 3 cut(s) 268, 824, 860
GsaI CCCAGC 1 cut(s) 1038
HaeIII GGCC 2 cut(s) 26, 1067
HapII CCGG 5 cut(s) 23, 105, 331, 1003, 1163
HincII GTYRAC 1 cut(s) 502
HindII GTYRAC 1 cut(s) 502
HindIII AAGCTT 2 cut(s) 665, 800
HinfI GANTC 9 cut(s) 56, 110, 656, 911, 966, 998, 1011, 1260, 1358
HpaII CCGG 5 cut(s) 23, 105, 331, 1003, 1163
HphI GGTGA 3 cut(s) 83, 161, 601
Hpy166II GTNNAC 4 cut(s) 120, 198, 502, 694
Hpy188I TCNGA 9 cut(s) 55, 214, 518, 598, 655, 1010, 1078, 1113, 1201
Hpy188III TCNNGA 7 cut(s) 38, 105, 165, 188, 970, 992, 1163
Hpy8I GTNNAC 4 cut(s) 120, 198, 502, 694
Hpy99I CGWCG 1 cut(s) 480
HpyAV CCTTC 4 cut(s) 400, 572, 839, 1309
HpyCH4III ACNGT 4 cut(s) 195, 233, 292, 691
HpyCH4IV ACGT 1 cut(s) 75
HpyF10VI GCNNNNNNNGC 2 cut(s) 449, 1399
HpyF3I CTNAG 3 cut(s) 597, 763, 1007
HpySE526I ACGT 1 cut(s) 75
Kpn2I TCCGGA 2 cut(s) 104, 1162
Ksp22I TGATCA 1 cut(s) 34
Kzo9I GATC 6 cut(s) 34, 253, 324, 513, 541, 1342
LmnI GCTCC 2 cut(s) 275, 1165
Lsp1109I GCAGC 2 cut(s) 254, 846
LweI GCATC 2 cut(s) 434, 1376
MaeI CTAG 2 cut(s) 449, 818
MaeII ACGT 1 cut(s) 75
MaeIII GTNAC 5 cut(s) 71, 218, 415, 562, 589
MalI GATC 6 cut(s) 36, 255, 326, 515, 543, 1344
MboI GATC 6 cut(s) 34, 253, 324, 513, 541, 1342
MboII GAAGA 8 cut(s) 53, 409, 521, 587, 980, 1007, 1430, 1439
MflI RGATCY 3 cut(s) 253, 324, 1342
MhlI GDGCHC 1 cut(s) 200
MlsI TGGCCA 1 cut(s) 1067
MluCI AATT 8 cut(s) 61, 153, 174, 304, 363, 567, 1071, 1334
MluNI TGGCCA 1 cut(s) 1067
MlyI GAGTC 2 cut(s) 119, 992
MmeI TCCRAC 1 cut(s) 684
Mox20I TGGCCA 1 cut(s) 1067
Mph1103I ATGCAT 3 cut(s) 1303, 1391, 1395
MroI TCCGGA 2 cut(s) 104, 1162
MscI TGGCCA 1 cut(s) 1067
MseI TTAA 8 cut(s) 80, 89, 339, 362, 732, 774, 960, 1028
MslI CAYNNNNRTG 1 cut(s) 1300
Msp20I TGGCCA 1 cut(s) 1067
MspI CCGG 5 cut(s) 23, 105, 331, 1003, 1163
MspR9I CCNGG 4 cut(s) 23, 331, 1003, 1415
MvaI CCWGG 1 cut(s) 1415
MvnI CGCG 2 cut(s) 971, 1367
MwoI GCNNNNNNNGC 2 cut(s) 449, 1399
NciI CCSGG 3 cut(s) 23, 331, 1003
NdeI CATATG 2 cut(s) 1147, 1297
NdeII GATC 6 cut(s) 34, 253, 324, 513, 541, 1342
NlaIV GGNNCC 2 cut(s) 1161, 1307
NmuCI GTSAC 3 cut(s) 71, 218, 589
NruI TCGCGA 1 cut(s) 971
NsiI ATGCAT 3 cut(s) 1303, 1391, 1395
NspI RCATGY 6 cut(s) 423, 530, 837, 880, 1280, 1393
PaeI GCATGC 1 cut(s) 1393
PciI ACATGT 1 cut(s) 419
PfeI GAWTC 7 cut(s) 56, 656, 911, 966, 1011, 1260, 1358
PflMI CCANNNNNTGG 1 cut(s) 1060
PfoI TCCNGGA 1 cut(s) 1413
PkrI GCNGC 3 cut(s) 269, 825, 861
PleI GAGTC 2 cut(s) 118, 992
PpsI GAGTC 2 cut(s) 118, 992
PscI ACATGT 1 cut(s) 419
Psp6I CCWGG 1 cut(s) 1413
PspFI CCCAGC 1 cut(s) 1034
PspGI CCWGG 1 cut(s) 1413
PspN4I GGNNCC 2 cut(s) 1161, 1307
PspPI GGNCC 2 cut(s) 25, 1051
PsuI RGATCY 3 cut(s) 253, 324, 1342
RruI TCGCGA 1 cut(s) 971
RsaI GTAC 6 cut(s) 20, 456, 531, 688, 875, 1044
RsaNI GTAC 6 cut(s) 19, 455, 530, 687, 874, 1043
RseI CAYNNNNRTG 1 cut(s) 1300
SaqAI TTAA 8 cut(s) 80, 89, 339, 362, 732, 774, 960, 1028
SatI GCNGC 3 cut(s) 268, 824, 860
Sau3AI GATC 6 cut(s) 34, 253, 324, 513, 541, 1342
Sau96I GGNCC 2 cut(s) 25, 1051
SchI GAGTC 2 cut(s) 119, 992
ScrFI CCNGG 4 cut(s) 23, 331, 1003, 1415
SduI GDGCHC 1 cut(s) 200
SfaNI GCATC 2 cut(s) 434, 1376
SfcI CTRYAG 2 cut(s) 291, 639
SinI GGWCC 1 cut(s) 1051
SmiMI CAYNNNNRTG 1 cut(s) 1300
SmlI CTYRAG 1 cut(s) 1229
SmoI CTYRAG 1 cut(s) 1229
SphI GCATGC 1 cut(s) 1393
Sse9I AATT 8 cut(s) 61, 153, 174, 304, 363, 567, 1071, 1334
SsiI CCGC 3 cut(s) 429, 823, 1365
SspMI CTAG 2 cut(s) 449, 818
StyD4I CCNGG 4 cut(s) 21, 329, 1001, 1413
TaaI ACNGT 4 cut(s) 195, 233, 292, 691
TaiI ACGT 1 cut(s) 78
TaqI TCGA 1 cut(s) 475
TasI AATT 8 cut(s) 61, 153, 174, 304, 363, 567, 1071, 1334
TatI WGTACW 4 cut(s) 454, 529, 873, 1042
TauI GCSGC 1 cut(s) 826
TfiI GAWTC 7 cut(s) 56, 656, 911, 966, 1011, 1260, 1358
Tru1I TTAA 8 cut(s) 80, 89, 339, 362, 732, 774, 960, 1028
Tru9I TTAA 8 cut(s) 80, 89, 339, 362, 732, 774, 960, 1028
TscAI CASTG 3 cut(s) 200, 562, 1276
TseFI GTSAC 3 cut(s) 71, 218, 589
TseI GCWGC 2 cut(s) 267, 859
Tsp45I GTSAC 3 cut(s) 71, 218, 589
TspDTI ATGAA 6 cut(s) 107, 249, 458, 522, 892, 1071
TspRI CASTG 3 cut(s) 200, 562, 1276
Van91I CCANNNNNTGG 1 cut(s) 1060
VneI GTGCAC 1 cut(s) 196
VpaK11BI GGWCC 1 cut(s) 1051
XagI CCTNNNNNAGG 1 cut(s) 1313
XapI RAATTY 2 cut(s) 1071, 1334
XceI RCATGY 6 cut(s) 423, 530, 837, 880, 1280, 1393
XspI CTAG 2 cut(s) 449, 818
Zsp2I ATGCAT 3 cut(s) 1303, 1391, 1395
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.