Rroxscaffold_1G00071850

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Reverse (-)
93002258 .. 93009119
6862 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00071850.1

Sequence Viewer

Length: 2202 bp
ATGGTTTTCATAATTATACTACTTTTAATGCCTACTACCATTTCTGGTGCAGATCTTCTTTTCAAAGATTGTACATCCACAAACTATATTGGCAAGAGTCCATTTGAAAATAATCTCAAGCTACTCCTCGAGTTATTGTCTTCCAATACTTCAATCTCTGGTGGTTTCTACAATGACACGATTGGCAATAGCAGTGACCGGGTCTATGGACAAGCACTTTGTAGAGGGGATGTAAACTCCACAGTTTGTCACAGCTGTGTTCATGATGCAAGCCAGGAAATCAAGAGTTGTAAAACTCAAGAAGCAATCATATGGTATGATCTATGTCAAGTTCACTATTCCTCTGCCCCGTTCTTTTCAATGATGTTATATGGTGGGAAGCTTCCTGAGAAGAATAAGCAGGAGAAGAATGTAACAAATCCCAAGCAGTTATTTGATGTTTTGAATAATTTAATGACAAAGCTCTTGGACCAGACTGCCTATACTTCTAAGGATATGTTTGCAACCGGCTATATGAAATTTTCAGGAAAGCAATCTATTTATGGCCTACAACAGTGCACTAGAGACATTTCTGAAGATGAATGCCATAACTGTTTGAATTCTGCTCGTGAGGAGCTTCAAGTATGCTGCTCTGCTCGCGAAGGTGGAACTGTTGTTAGTAGGAATTGTAATGTGAGGTTTGAGCTCTACCAATTTTTCAACGACATTTCCAAAGGGGACAAGAGAAAGAGTTGGAAGGTGGTCGTTATATGTGTATCCACAATACTATCAGCAGTTTTCATTGTACTTTGTGCTGTCTATCTTCGGCTGGGAAGGGAATTGGAAAATGTCCAAGAAGACAAAATGGTAAGTTCTGAAGAGCTGCCATTCATTGATCTAGCTACTATAAGGAAAGCTACAGATGACTTTTCAGATTCGAACAAGCTTGGACAAGGTGGATTCGGTGCTGTTTACAAGGGTTGGCTAGATGGGAAAGAAGTAGCTGTTAAAAGACTATCAAGAAAGTCATGGCAAGGCTTAGAGGAGTTTAGAAATGAAGTCACTCTCATTGCAAAGCTTCAACACAGAAACCTCGTGCGGCTTTTGGCATGTGGCTTTGAGGGAGGAGAAAAGCTGCTTTTGTACGAGTTCATGCCAAATAAAAGCCTTGATACTTTTATCTTTGATTTGGAAAGACGAGCTGAACTCAATTGGCAAACATATCACAACATCATTGAAGGAATAGCCAGAGGACTTCTGTATCTTCATGAGGATTCCCGGCTTAAGATCATTCACAGGGATTTGAAGCCCAACAATGTGTTGTTGGACCATGAAATGGTTCCAAAAATAGCAGACTTTGGAATGGCAAGGATATTTTGTGACAACCAGAACATTGCCAACACTAAAAGAGTTGTAGGAACACACGGCTACATGGCTCCCGAGTATGCAATGGAGGGACTATTTTCTGTAAAATCTGATGTTTTCAGCTTTGGAGTAGTCCTGCTTGAGATTATAAGTGGGAAAAAGAATAGTGGGTTCTACCTCACGGAACATGCCAAGACGCTCGTTGAATACGCATGGACACTATGGAAGGATGGAAAAGGGTCGGAGTTTGTGGAACCTTTGTTGATGGAATGTTGCCCGAAAGCAGACGTTTTGAAATACTTGCAGATTGCGCTTTTATGTGTCCAGGAAGACCCTGAAGAAAGACCAACAATGTCAACTGTGGTTGTGTTGCTGGGAAATGATGACTCAATTGGTCTTCCTGAACCGAACAAACCAGCCATATTTGCAATAGGTTGCATAGCATCTTATAGCTGCAATTCACGAATTCTCCAATCCACCATTAAGTTCTTTATTAATTACAATACTGAAGACATTCTAAAGCAAGCAACCGAATTAACTCTTCGGATCCACGGCAATGCAGATATCGGAATGCAGATTCTGAATGAGCTTCTGCACATTCTAAAAAAACCTCAGCACATTGAGCCTCTGCATAACTCTATTCCTGAAGTTACAGTAAAAGAAAGTGAAAAACTGGTCAAAGAGACTGCAGTTAATGTTGATGAGGCAGCAAGAGAACTTCCATATGCCAATATGATTCTAGACAGTGGAGAACAGATAGGATTGAAGCATTTTAAGCCTATAAAGCCCTTGGGATCTGGTGATACTGGCAGTGTGCATTTGGTCCAATTGTGTGGAACTGATCAGTACTACCCATGA

Protein Analysis

733

Amino Acids

82.48

Weight (kDa)

5.8

Isoelectric Point (pI)

44.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 24 - 115 7.7e-22 Salt stress response/antifungal
Stress-antifung PF01657 134 - 229 1.8e-12 Salt stress response/antifungal
Pkinase PF00069 304 - 569 6.6e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 306 - 571 3.6e-46 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000635)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g02731 FvH4_3g02732 FvH4_3g02732 FvH4_3g02732 FvH4_3g02751 FvH4_3g02752 FvH4_3g02770 FvH4_3g02770 FvH4_3g02770 FvH4_3g02771
malus_domestica MD10G1249000.v1.1 MD10G1249100.v1.1 MD10G1313300.v1.1 MD10G1313400.v1.1 MD10G1313500.v1.1 MD10G1313600.v1.1 MD10G1313800.v1.1
prunus_persica Prupe.4G027200_v2.0.a1 Prupe.6G140300_v2.0.a1 Prupe.6G140400_v2.0.a1 Prupe.6G140400_v2.0.a1
pyrus_communis pycom10g26540 pycom10g26560 pycom10g26580 pycom10g26600
rosa_chinensis RchiOBHm_Chr5g0004141 RchiOBHm_Chr5g0004151 RchiOBHm_Chr5g0004161
rosa_laevigata RLG00000031205 RLG00000031206 RLG00000031208 RLG00000031209 RLG00000031210
rosa_multiflora Rmu_co8256217.1_g000001 Rmu_co8309209.1_g000001 Rmu_sc0000547.1_g000034 Rmu_sc0004964.1_g000028 Rmu_sc0007868.1_g000001 Rmu_sc0010028.1_g000001 Rmu_sc0017938.1_g000001 Rmu_sc0027606.1_g000001 Rmu_sc0027892.1_g000001
rosa_roxburghii Rroxscaffold_1G00071540 Rroxscaffold_1G00071550 Rroxscaffold_1G00071610 Rroxscaffold_1G00071620 Rroxscaffold_1G00071640 Rroxscaffold_1G00071650 Rroxscaffold_1G00071790 Rroxscaffold_1G00071800 Rroxscaffold_1G00071810 Rroxscaffold_1G00071850 Rroxscaffold_1G00071860 Rroxscaffold_1G00071880 Rroxscaffold_1G00071890
rosa_rugosa Rorug04G0410500 Rorug04G0410500 Rorug04G0410500 Rorug04G0410600
rosa_samantha Rh5AG037700 Rh5AG037800 Rh5AG037900 Rh5AG038000 Rh5BG037000 Rh5BG037100 Rh5BG037200 Rh5CG040400 Rh5CG040500 Rh5CG040600 Rh5CG040700 Rh5DG036400 Rh5DG036600 Rh5DG036800
rosa_wichuraiana Rw5G003410 Rw5G003420 Rw5G003590 Rw5G003600 Rw5G003610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1493
AccB7I CCANNNNNTGG 1 cut(s) 1315
AccII CGCG 1 cut(s) 639
AciI CCGC 1 cut(s) 1078
AclWI GGATC 3 cut(s) 1885, 1898, 2146
AcsI RAATTY 3 cut(s) 518, 598, 1809
AcuI CTGAAG 5 cut(s) 594, 876, 1701, 1872, 2010
AfaI GTAC 4 cut(s) 73, 786, 1124, 2192
AfiI CCNNNNNNNGG 1 cut(s) 1315
AflII CTTAAG 1 cut(s) 1262
AjnI CCWGG 2 cut(s) 273, 1668
AleI CACNNNNGTG 1 cut(s) 255
Alw21I GWGCWC 2 cut(s) 560, 687
Alw26I GTCTC 2 cut(s) 558, 2021
Alw44I GTGCAC 1 cut(s) 556
AlwI GGATC 3 cut(s) 1885, 1898, 2146
AlwNI CAGNNNCTG 1 cut(s) 1924
Ama87I CYCGRG 2 cut(s) 128, 1418
AoxI GGCC 1 cut(s) 544
ApaLI GTGCAC 1 cut(s) 556
ApeKI GCWGC 5 cut(s) 627, 862, 1114, 1797, 2051
ApoI RAATTY 3 cut(s) 518, 598, 1809
ArsI GACNNNNNNTTYG 2 cut(s) 201, 233
AseI ATTAAT 1 cut(s) 1839
Asp700I GAANNNNTTC 2 cut(s) 1317, 1857
AspLEI GCGC 1 cut(s) 1657
AspS9I GGNCC 3 cut(s) 469, 1306, 2167
AsuC2I CCSGG 2 cut(s) 200, 1258
AsuHPI GGTGA 1 cut(s) 2156
AsuII TTCGAA 1 cut(s) 917
AvaI CYCGRG 2 cut(s) 128, 1418
AvaII GGWCC 3 cut(s) 469, 1306, 2167
BaeGI GKGCMC 1 cut(s) 560
BaeI ACNNNNGTAYC 2 cut(s) 1223, 1256
BamHI GGATCC 1 cut(s) 1890
BanII GRGCYC 1 cut(s) 687
BauI CACGAG 2 cut(s) 606, 1073
BbsI GAAGAC 5 cut(s) 132, 843, 1680, 1733, 1860
Bbv12I GWGCWC 2 cut(s) 560, 687
BbvCI CCTCAGC 1 cut(s) 1956
BbvI GCAGC 5 cut(s) 614, 849, 1101, 1784, 2063
BccI CCATC 3 cut(s) 962, 1568, 1603
BceAI ACGGC 2 cut(s) 1420, 1912
BciT130I CCWGG 2 cut(s) 275, 1670
BciVI GTATCC 1 cut(s) 766
BclI TGATCA 1 cut(s) 2185
BcnI CCSGG 2 cut(s) 200, 1258
BcoDI GTCTC 2 cut(s) 558, 2021
BfaI CTAG 4 cut(s) 561, 878, 965, 2084
BfmI CTRYAG 2 cut(s) 897, 2031
BfrI CTTAAG 1 cut(s) 1262
BfuI GTATCC 1 cut(s) 766
BglII AGATCT 1 cut(s) 52
BisI GCNGC 6 cut(s) 628, 863, 1079, 1115, 1798, 2052
BlsI GCNGC 6 cut(s) 629, 864, 1080, 1116, 1799, 2053
BmcAI AGTACT 1 cut(s) 2192
Bme1390I CCNGG 4 cut(s) 200, 275, 1258, 1670
Bme18I GGWCC 3 cut(s) 469, 1306, 2167
BmeT110I CYCGRG 2 cut(s) 128, 1418
BmgT120I GGNCC 3 cut(s) 469, 1306, 2167
BmiI GGNNCC 4 cut(s) 1320, 1416, 1599, 1892
BmrFI CCNGG 4 cut(s) 200, 275, 1258, 1670
BmsI GCATC 2 cut(s) 256, 1796
BpiI GAAGAC 5 cut(s) 132, 843, 1680, 1733, 1860
BplI GAGNNNNNCTC 2 cut(s) 1170, 1202
Bpu10I CCTNAGC 1 cut(s) 1956
Bpu14I TTCGAA 1 cut(s) 917
BpuEI CTTGAG 3 cut(s) 101, 282, 1505
BpuMI CCSGG 2 cut(s) 200, 1258
BsaJI CCNNGG 2 cut(s) 1894, 2133
BsaXI ACNNNNNCTCC 2 cut(s) 1797, 1827
Bsc4I CCNNNNNNNGG 1 cut(s) 1315
Bse118I RCCGGY 1 cut(s) 506
Bse1I ACTGG 2 cut(s) 2022, 2155
Bse3DI GCAATG 4 cut(s) 1047, 1371, 1434, 1906
BseBI CCWGG 2 cut(s) 275, 1670
BseDI CCNNGG 2 cut(s) 1894, 2133
BseGI GGATG 3 cut(s) 74, 235, 1579
BseLI CCNNNNNNNGG 1 cut(s) 1315
BseMI GCAATG 4 cut(s) 1047, 1371, 1434, 1906
BseMII CTCAG 2 cut(s) 378, 1970
BseNI ACTGG 2 cut(s) 2022, 2155
BseRI GAGGAG 4 cut(s) 116, 626, 1037, 1119
BseSI GKGCMC 1 cut(s) 560
BseXI GCAGC 5 cut(s) 614, 849, 1101, 1784, 2063
BseYI CCCAGC 2 cut(s) 808, 1717
BsgI GTGCAG 2 cut(s) 69, 1922
Bsh1236I CGCG 1 cut(s) 639
BshFI GGCC 1 cut(s) 546
BsiHKAI GWGCWC 2 cut(s) 560, 687
BsiHKCI CYCGRG 2 cut(s) 128, 1418
BsiSI CCGG 3 cut(s) 199, 507, 1258
BslFI GGGAC 2 cut(s) 731, 1449
BslI CCNNNNNNNGG 1 cut(s) 1315
BsmAI GTCTC 2 cut(s) 558, 2021
BsmFI GGGAC 2 cut(s) 731, 1449
BsmI GAATGC 2 cut(s) 587, 1920
BsnI GGCC 1 cut(s) 546
BsoBI CYCGRG 2 cut(s) 128, 1418
Bsp119I TTCGAA 1 cut(s) 917
Bsp1286I GDGCHC 2 cut(s) 560, 687
Bsp1407I TGTACA 1 cut(s) 71
Bsp143I GATC 7 cut(s) 52, 319, 874, 1266, 1890, 2138, 2185
Bsp68I TCGCGA 1 cut(s) 639
BspACI CCGC 1 cut(s) 1078
BspANI GGCC 1 cut(s) 546
BspCNI CTCAG 2 cut(s) 379, 1969
BspFNI CGCG 1 cut(s) 639
BspHI TCATGA 2 cut(s) 262, 1246
BspLI GGNNCC 4 cut(s) 1320, 1416, 1599, 1892
BspMAI CTGCAG 1 cut(s) 2035
BspPI GGATC 3 cut(s) 1885, 1898, 2146
BspQI GCTCTTC 1 cut(s) 852
BspT104I TTCGAA 1 cut(s) 917
BspTI CTTAAG 1 cut(s) 1262
BsrDI GCAATG 4 cut(s) 1047, 1371, 1434, 1906
BsrFI RCCGGY 1 cut(s) 506
BsrGI TGTACA 1 cut(s) 71
BsrI ACTGG 2 cut(s) 2022, 2155
BssAI RCCGGY 1 cut(s) 506
BssECI CCNNGG 2 cut(s) 1894, 2133
BssMI GATC 7 cut(s) 52, 319, 874, 1266, 1890, 2138, 2185
BssSI CACGAG 2 cut(s) 606, 1073
BssT1I CCWWGG 1 cut(s) 2133
Bst2BI CACGAG 2 cut(s) 606, 1073
Bst2UI CCWGG 2 cut(s) 275, 1670
Bst4CI ACNGT 7 cut(s) 244, 555, 593, 652, 1705, 1999, 2090
Bst6I CTCTTC 2 cut(s) 852, 1890
BstAFI CTTAAG 1 cut(s) 1262
BstAUI TGTACA 1 cut(s) 71
BstBI TTCGAA 1 cut(s) 917
BstC8I GCNNGC 3 cut(s) 271, 637, 1869
BstDEI CTNAG 4 cut(s) 387, 489, 1018, 1956
BstDSI CCRYGG 1 cut(s) 1894
BstF5I GGATG 3 cut(s) 74, 235, 1579
BstFNI CGCG 1 cut(s) 639
BstHHI GCGC 1 cut(s) 1657
BstKTI GATC 7 cut(s) 55, 322, 877, 1269, 1893, 2141, 2188
BstMAI GTCTC 2 cut(s) 558, 2021
BstMBI GATC 7 cut(s) 52, 319, 874, 1266, 1890, 2138, 2185
BstMWI GCNNNNNNNGC 6 cut(s) 636, 1654, 1769, 1966, 2119, 2128
BstNI CCWGG 2 cut(s) 275, 1670
BstNSI RCATGY 2 cut(s) 1092, 1535
BstSCI CCNGG 4 cut(s) 198, 273, 1256, 1668
BstSFI CTRYAG 2 cut(s) 897, 2031
BstSLI GKGCMC 1 cut(s) 560
BstUI CGCG 1 cut(s) 639
BstV1I GCAGC 5 cut(s) 614, 849, 1101, 1784, 2063
BstV2I GAAGAC 5 cut(s) 132, 843, 1680, 1733, 1860
BstX2I RGATCY 3 cut(s) 52, 1890, 2138
BstXI CCANNNNNNTGG 1 cut(s) 2177
BstYI RGATCY 3 cut(s) 52, 1890, 2138
BsuI GTATCC 1 cut(s) 766
BsuRI GGCC 1 cut(s) 546
BtgI CCRYGG 1 cut(s) 1894
BtsCI GGATG 3 cut(s) 74, 235, 1579
BtsI GCAGTG 2 cut(s) 199, 2161
BtsIMutI CAGTG 4 cut(s) 199, 560, 2095, 2161
BtuMI TCGCGA 1 cut(s) 639
Cac8I GCNNGC 3 cut(s) 271, 637, 1869
CaiI CAGNNNCTG 1 cut(s) 1924
CciI TCATGA 2 cut(s) 262, 1246
CfoI GCGC 1 cut(s) 1657
Cfr10I RCCGGY 1 cut(s) 506
Cfr13I GGNCC 3 cut(s) 469, 1306, 2167
CseI GACGC 1 cut(s) 1549
Csp6I GTAC 4 cut(s) 72, 785, 1123, 2191
CviQI GTAC 4 cut(s) 72, 785, 1123, 2191
DdeI CTNAG 4 cut(s) 387, 489, 1018, 1956
DpnI GATC 7 cut(s) 54, 321, 876, 1268, 1892, 2140, 2187
DpnII GATC 7 cut(s) 52, 319, 874, 1266, 1890, 2138, 2185
Eam1104I CTCTTC 2 cut(s) 852, 1890
EarI CTCTTC 2 cut(s) 852, 1890
Ecl136II GAGCTC 1 cut(s) 685
Eco130I CCWWGG 1 cut(s) 2133
Eco24I GRGCYC 1 cut(s) 687
Eco32I GATATC 1 cut(s) 1909
Eco47I GGWCC 3 cut(s) 469, 1306, 2167
Eco53kI GAGCTC 1 cut(s) 685
Eco57I CTGAAG 5 cut(s) 594, 876, 1701, 1872, 2010
Eco88I CYCGRG 2 cut(s) 128, 1418
EcoICRI GAGCTC 1 cut(s) 685
EcoRI GAATTC 2 cut(s) 598, 1809
EcoRII CCWGG 2 cut(s) 273, 1668
EcoRV GATATC 1 cut(s) 1909
EcoT14I CCWWGG 1 cut(s) 2133
EcoT38I GRGCYC 1 cut(s) 687
ErhI CCWWGG 1 cut(s) 2133
FaqI GGGAC 2 cut(s) 731, 1449
FauNDI CATATG 2 cut(s) 311, 2068
FbaI TGATCA 1 cut(s) 2185
Fnu4HI GCNGC 6 cut(s) 628, 863, 1079, 1115, 1798, 2052
FokI GGATG 3 cut(s) 61, 242, 1586
FriOI GRGCYC 1 cut(s) 687
Fsp4HI GCNGC 6 cut(s) 628, 863, 1079, 1115, 1798, 2052
FspBI CTAG 4 cut(s) 561, 878, 965, 2084
GlaI GCGC 1 cut(s) 1656
GluI GCNGC 6 cut(s) 628, 863, 1079, 1115, 1798, 2052
GsaI CCCAGC 2 cut(s) 812, 1721
HaeIII GGCC 1 cut(s) 546
HapII CCGG 3 cut(s) 199, 507, 1258
HgaI GACGC 1 cut(s) 1549
HhaI GCGC 1 cut(s) 1657
Hin6I GCGC 1 cut(s) 1655
HinP1I GCGC 1 cut(s) 1655
HincII GTYRAC 1 cut(s) 1701
HindII GTYRAC 1 cut(s) 1701
HindIII AAGCTT 3 cut(s) 380, 923, 1055
HinfI GANTC 7 cut(s) 97, 914, 939, 1253, 1730, 1921, 2080
HpaII CCGG 3 cut(s) 199, 507, 1258
HphI GGTGA 1 cut(s) 2156
Hpy166II GTNNAC 5 cut(s) 235, 334, 558, 952, 1701
Hpy188I TCNGA 8 cut(s) 574, 856, 913, 1456, 1588, 1890, 1913, 1926
Hpy8I GTNNAC 5 cut(s) 235, 334, 558, 952, 1701
HpyAV CCTTC 5 cut(s) 635, 730, 807, 1211, 1564
HpyCH4III ACNGT 7 cut(s) 244, 555, 593, 652, 1705, 1999, 2090
HpyCH4IV ACGT 1 cut(s) 1632
HpyF10VI GCNNNNNNNGC 6 cut(s) 636, 1654, 1769, 1966, 2119, 2128
HpyF3I CTNAG 4 cut(s) 387, 489, 1018, 1956
HpySE526I ACGT 1 cut(s) 1632
HspAI GCGC 1 cut(s) 1655
Ksp22I TGATCA 1 cut(s) 2185
Kzo9I GATC 7 cut(s) 52, 319, 874, 1266, 1890, 2138, 2185
LguI GCTCTTC 1 cut(s) 852
LmnI GCTCC 2 cut(s) 613, 1420
Lsp1109I GCAGC 5 cut(s) 614, 849, 1101, 1784, 2063
LweI GCATC 2 cut(s) 256, 1796
MaeI CTAG 4 cut(s) 561, 878, 965, 2084
MaeII ACGT 1 cut(s) 1632
MaeIII GTNAC 6 cut(s) 194, 248, 412, 1039, 1358, 1993
MalI GATC 7 cut(s) 54, 321, 876, 1268, 1892, 2140, 2187
MboI GATC 7 cut(s) 52, 319, 874, 1266, 1890, 2138, 2185
MfeI CAATTG 3 cut(s) 1189, 1734, 2171
MflI RGATCY 3 cut(s) 52, 1890, 2138
MhlI GDGCHC 2 cut(s) 560, 687
MlyI GAGTC 2 cut(s) 106, 1724
MmeI TCCRAC 3 cut(s) 713, 1284, 1566
MroXI GAANNNNTTC 2 cut(s) 1317, 1857
MseI TTAA 9 cut(s) 26, 452, 987, 1263, 1827, 1839, 1880, 2037, 2118
MslI CAYNNNNRTG 2 cut(s) 255, 1899
MspA1I CMGCKG 1 cut(s) 255
MspCI CTTAAG 1 cut(s) 1262
MspI CCGG 3 cut(s) 199, 507, 1258
MspR9I CCNGG 4 cut(s) 200, 275, 1258, 1670
MunI CAATTG 3 cut(s) 1189, 1734, 2171
Mva1269I GAATGC 2 cut(s) 587, 1920
MvaI CCWGG 2 cut(s) 275, 1670
MvnI CGCG 1 cut(s) 639
MwoI GCNNNNNNNGC 6 cut(s) 636, 1654, 1769, 1966, 2119, 2128
NciI CCSGG 2 cut(s) 200, 1258
NdeI CATATG 2 cut(s) 311, 2068
NdeII GATC 7 cut(s) 52, 319, 874, 1266, 1890, 2138, 2185
NlaIV GGNNCC 4 cut(s) 1320, 1416, 1599, 1892
NmuCI GTSAC 4 cut(s) 194, 248, 1039, 1358
NruI TCGCGA 1 cut(s) 639
NspI RCATGY 2 cut(s) 1092, 1535
NspV TTCGAA 1 cut(s) 917
OliI CACNNNNGTG 1 cut(s) 255
PaeR7I CTCGAG 1 cut(s) 128
PagI TCATGA 2 cut(s) 262, 1246
PciSI GCTCTTC 1 cut(s) 852
PctI GAATGC 2 cut(s) 587, 1920
PdmI GAANNNNTTC 2 cut(s) 1317, 1857
PfeI GAWTC 5 cut(s) 914, 939, 1253, 1921, 2080
PflFI GACNNNGTC 1 cut(s) 200
PflMI CCANNNNNTGG 1 cut(s) 1315
PfoI TCCNGGA 1 cut(s) 1668
PkrI GCNGC 6 cut(s) 629, 864, 1080, 1116, 1799, 2053
PleI GAGTC 2 cut(s) 105, 1724
PpsI GAGTC 2 cut(s) 105, 1724
PshBI ATTAAT 1 cut(s) 1839
PsiI TTATAA 1 cut(s) 1493
Psp124BI GAGCTC 1 cut(s) 687
Psp6I CCWGG 2 cut(s) 273, 1668
PspFI CCCAGC 2 cut(s) 808, 1717
PspGI CCWGG 2 cut(s) 273, 1668
PspN4I GGNNCC 4 cut(s) 1320, 1416, 1599, 1892
PspPI GGNCC 3 cut(s) 469, 1306, 2167
PspXI VCTCGAGB 1 cut(s) 128
PstI CTGCAG 1 cut(s) 2035
PstNI CAGNNNCTG 1 cut(s) 1924
PsuI RGATCY 3 cut(s) 52, 1890, 2138
PsyI GACNNNGTC 1 cut(s) 200
PvuII CAGCTG 1 cut(s) 255
RruI TCGCGA 1 cut(s) 639
RsaI GTAC 4 cut(s) 73, 786, 1124, 2192
RsaNI GTAC 4 cut(s) 72, 785, 1123, 2191
RseI CAYNNNNRTG 2 cut(s) 255, 1899
SacI GAGCTC 1 cut(s) 687
SapI GCTCTTC 1 cut(s) 852
SaqAI TTAA 9 cut(s) 26, 452, 987, 1263, 1827, 1839, 1880, 2037, 2118
SatI GCNGC 6 cut(s) 628, 863, 1079, 1115, 1798, 2052
Sau3AI GATC 7 cut(s) 52, 319, 874, 1266, 1890, 2138, 2185
Sau96I GGNCC 3 cut(s) 469, 1306, 2167
ScaI AGTACT 1 cut(s) 2192
SchI GAGTC 2 cut(s) 106, 1724
ScrFI CCNGG 4 cut(s) 200, 275, 1258, 1670
SduI GDGCHC 2 cut(s) 560, 687
SfaNI GCATC 2 cut(s) 256, 1796
SfcI CTRYAG 2 cut(s) 897, 2031
Sfr274I CTCGAG 1 cut(s) 128
SfuI TTCGAA 1 cut(s) 917
SinI GGWCC 3 cut(s) 469, 1306, 2167
SlaI CTCGAG 1 cut(s) 128
SmiMI CAYNNNNRTG 2 cut(s) 255, 1899
SmlI CTYRAG 5 cut(s) 116, 128, 297, 1262, 1484
SmoI CTYRAG 5 cut(s) 116, 128, 297, 1262, 1484
SsiI CCGC 1 cut(s) 1078
SspMI CTAG 4 cut(s) 561, 878, 965, 2084
SstI GAGCTC 1 cut(s) 687
StyD4I CCNGG 4 cut(s) 198, 273, 1256, 1668
StyI CCWWGG 1 cut(s) 2133
TaaI ACNGT 7 cut(s) 244, 555, 593, 652, 1705, 1999, 2090
TaiI ACGT 1 cut(s) 1635
TaqI TCGA 2 cut(s) 129, 917
TatI WGTACW 3 cut(s) 71, 784, 2190
TauI GCSGC 1 cut(s) 1081
TfiI GAWTC 5 cut(s) 914, 939, 1253, 1921, 2080
Tru1I TTAA 9 cut(s) 26, 452, 987, 1263, 1827, 1839, 1880, 2037, 2118
Tru9I TTAA 9 cut(s) 26, 452, 987, 1263, 1827, 1839, 1880, 2037, 2118
TscAI CASTG 4 cut(s) 199, 560, 2095, 2161
TseFI GTSAC 4 cut(s) 194, 248, 1039, 1358
TseI GCWGC 5 cut(s) 627, 862, 1114, 1797, 2051
Tsp45I GTSAC 4 cut(s) 194, 248, 1039, 1358
TspDTI ATGAA 9 cut(s) 251, 530, 594, 769, 859, 1050, 1120, 1235, 1326
TspGWI ACGGA 1 cut(s) 1541
TspRI CASTG 4 cut(s) 199, 560, 2095, 2161
Tth111I GACNNNGTC 1 cut(s) 200
Van91I CCANNNNNTGG 1 cut(s) 1315
Vha464I CTTAAG 1 cut(s) 1262
VneI GTGCAC 1 cut(s) 556
VpaK11BI GGWCC 3 cut(s) 469, 1306, 2167
VspI ATTAAT 1 cut(s) 1839
XapI RAATTY 3 cut(s) 518, 598, 1809
XbaI TCTAGA 1 cut(s) 2083
XceI RCATGY 2 cut(s) 1092, 1535
XhoI CTCGAG 1 cut(s) 128
XmnI GAANNNNTTC 2 cut(s) 1317, 1857
XspI CTAG 4 cut(s) 561, 878, 965, 2084
ZrmI AGTACT 1 cut(s) 2192
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.