Rmu_sc0007868.1_g000001

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007868.1
Physical Location & Seq
Forward (+)
1 .. 1508
1508 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007868.1_g000001.1.cds

Sequence Viewer

Length: 1105 bp
tgctgcagatgaagaaagaagccagcatggactattacctgaattattaaaccccactggagtcacaatcattgaagaagacaaaatggtaagttctgaagagctgccgttcattgatctagctactataaggaaagctacagatgacttttcagattcgaacaagcttggacaaggtggattcggtgctgtttacaagggttggctagatgggaaagaagtagctgttaaaagactatcaagaaagtcatggcaaggcttagaggagtatagaaatgaagtcactctcattgcaaagcttcaacacagaaacctcgtgcggcttttggcatgtggctatgagggaggagaaaagctgcttttgtacgagttcatgccaaataaaagccttgatacttttatctttgatttggaaagacgagctgaactcaattggcaaacgtatcacaacatcattgaaggaatagccagaggacttctgtatcttcatgaggattcccggcttaagatcattcacagggatttgaagcccaacaatgtgttgttggaccatgaaatggttccaaaaatatcggactttggaatggcaaggatattttgtgacaaccagaacattgccaacactaaaaaagttgtcggaacacacggctacatggctcccgagtatgcaatggagggactattttctgtaaaatctgatgttttcagctttggagtggtcttgcttgagattataagtgggaaaaagaatagtgggttctacctcacggaacatgccaagacgctcattgaatacgcatggacactatggaaggatggaaaagggtcggagtttgtggaacctttgttgatggaatgttgcccgaaagcagacattttgaaatacttgcagattgcgcttttatgtgtccaggaagaccctgaagaaagaccaacaatgtcagctgtggttgtgttgctgggaaatgatgactcaattggtcttcctgaaccaaagaaaccagccatatttgcaataagtagagttgctccaataaacgagtatacacataccgctaatcctacttcaaatcagctcactctttccatcatttcaccgaggtga

Protein Analysis

367

Amino Acids

41.35

Weight (kDa)

5.42

Isoelectric Point (pI)

48.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000635)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g02731 FvH4_3g02732 FvH4_3g02732 FvH4_3g02732 FvH4_3g02751 FvH4_3g02752 FvH4_3g02770 FvH4_3g02770 FvH4_3g02770 FvH4_3g02771
malus_domestica MD10G1249000.v1.1 MD10G1249100.v1.1 MD10G1313300.v1.1 MD10G1313400.v1.1 MD10G1313500.v1.1 MD10G1313600.v1.1 MD10G1313800.v1.1
prunus_persica Prupe.4G027200_v2.0.a1 Prupe.6G140300_v2.0.a1 Prupe.6G140400_v2.0.a1 Prupe.6G140400_v2.0.a1
pyrus_communis pycom10g26540 pycom10g26560 pycom10g26580 pycom10g26600
rosa_chinensis RchiOBHm_Chr5g0004141 RchiOBHm_Chr5g0004151 RchiOBHm_Chr5g0004161
rosa_laevigata RLG00000031205 RLG00000031206 RLG00000031208 RLG00000031209 RLG00000031210
rosa_multiflora Rmu_co8256217.1_g000001 Rmu_co8309209.1_g000001 Rmu_sc0000547.1_g000034 Rmu_sc0004964.1_g000028 Rmu_sc0007868.1_g000001 Rmu_sc0010028.1_g000001 Rmu_sc0017938.1_g000001 Rmu_sc0027606.1_g000001 Rmu_sc0027892.1_g000001
rosa_roxburghii Rroxscaffold_1G00071540 Rroxscaffold_1G00071550 Rroxscaffold_1G00071610 Rroxscaffold_1G00071620 Rroxscaffold_1G00071640 Rroxscaffold_1G00071650 Rroxscaffold_1G00071790 Rroxscaffold_1G00071800 Rroxscaffold_1G00071810 Rroxscaffold_1G00071850 Rroxscaffold_1G00071860 Rroxscaffold_1G00071880 Rroxscaffold_1G00071890
rosa_rugosa Rorug04G0410500 Rorug04G0410500 Rorug04G0410500 Rorug04G0410600
rosa_samantha Rh5AG037700 Rh5AG037800 Rh5AG037900 Rh5AG038000 Rh5BG037000 Rh5BG037100 Rh5BG037200 Rh5CG040400 Rh5CG040500 Rh5CG040600 Rh5CG040700 Rh5DG036400 Rh5DG036600 Rh5DG036800
rosa_wichuraiana Rw5G003410 Rw5G003420 Rw5G003590 Rw5G003600 Rw5G003610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 735
AccB7I CCANNNNNTGG 1 cut(s) 557
AccI GTMKAC 1 cut(s) 1044
AciI CCGC 2 cut(s) 320, 1054
AcuI CTGAAG 2 cut(s) 118, 943
AfaI GTAC 1 cut(s) 366
AfiI CCNNNNNNNGG 1 cut(s) 557
AflII CTTAAG 1 cut(s) 504
AgsI TTSAA 7 cut(s) 75, 303, 459, 527, 792, 881, 1069
AjnI CCWGG 1 cut(s) 910
AleI CACNNNNGTG 1 cut(s) 1100
Ama87I CYCGRG 1 cut(s) 660
ApeKI GCWGC 3 cut(s) 3, 104, 356
Asp700I GAANNNNTTC 1 cut(s) 559
AspLEI GCGC 1 cut(s) 899
AspS9I GGNCC 1 cut(s) 548
AsuC2I CCSGG 1 cut(s) 500
AsuHPI GGTGA 1 cut(s) 1087
AsuII TTCGAA 1 cut(s) 159
AvaI CYCGRG 1 cut(s) 660
AvaII GGWCC 1 cut(s) 548
BaeI ACNNNNGTAYC 2 cut(s) 465, 498
BauI CACGAG 1 cut(s) 315
BbsI GAAGAC 3 cut(s) 85, 922, 975
BbvI GCAGC 2 cut(s) 91, 343
BccI CCATC 4 cut(s) 204, 810, 845, 1095
BceAI ACGGC 2 cut(s) 92, 662
BciT130I CCWGG 1 cut(s) 912
BcnI CCSGG 1 cut(s) 500
BfaI CTAG 2 cut(s) 120, 207
BfmI CTRYAG 2 cut(s) 4, 139
BfrI CTTAAG 1 cut(s) 504
BisI GCNGC 4 cut(s) 4, 105, 321, 357
BlsI GCNGC 4 cut(s) 5, 106, 322, 358
Bme1390I CCNGG 2 cut(s) 500, 912
Bme18I GGWCC 1 cut(s) 548
BmeT110I CYCGRG 1 cut(s) 660
BmgT120I GGNCC 1 cut(s) 548
BmiI GGNNCC 3 cut(s) 562, 658, 841
BmrFI CCNGG 2 cut(s) 500, 912
BpiI GAAGAC 3 cut(s) 85, 922, 975
BplI GAGNNNNNCTC 2 cut(s) 412, 444
BpmI CTGGAG 1 cut(s) 79
Bpu14I TTCGAA 1 cut(s) 159
BpuEI CTTGAG 1 cut(s) 747
BpuMI CCSGG 1 cut(s) 500
BsaJI CCNNGG 1 cut(s) 1098
Bsc4I CCNNNNNNNGG 1 cut(s) 557
Bse1I ACTGG 1 cut(s) 62
Bse3DI GCAATG 3 cut(s) 289, 613, 676
BseBI CCWGG 1 cut(s) 912
BseDI CCNNGG 1 cut(s) 1098
BseGI GGATG 1 cut(s) 821
BseLI CCNNNNNNNGG 1 cut(s) 557
BseMI GCAATG 3 cut(s) 289, 613, 676
BseNI ACTGG 1 cut(s) 62
BseRI GAGGAG 2 cut(s) 279, 361
BseXI GCAGC 2 cut(s) 91, 343
BseYI CCCAGC 1 cut(s) 959
BsiHKCI CYCGRG 1 cut(s) 660
BsiSI CCGG 1 cut(s) 500
BslFI GGGAC 1 cut(s) 691
BslI CCNNNNNNNGG 1 cut(s) 557
BsmFI GGGAC 1 cut(s) 691
BsoBI CYCGRG 1 cut(s) 660
Bsp119I TTCGAA 1 cut(s) 159
Bsp143I GATC 2 cut(s) 116, 508
BspACI CCGC 2 cut(s) 320, 1054
BspHI TCATGA 1 cut(s) 488
BspLI GGNNCC 3 cut(s) 562, 658, 841
BspMAI CTGCAG 1 cut(s) 8
BspQI GCTCTTC 1 cut(s) 94
BspT104I TTCGAA 1 cut(s) 159
BspTI CTTAAG 1 cut(s) 504
BsrDI GCAATG 3 cut(s) 289, 613, 676
BsrI ACTGG 1 cut(s) 62
BssECI CCNNGG 1 cut(s) 1098
BssMI GATC 2 cut(s) 116, 508
BssNAI GTATAC 1 cut(s) 1045
BssSI CACGAG 1 cut(s) 315
Bst1107I GTATAC 1 cut(s) 1045
Bst2BI CACGAG 1 cut(s) 315
Bst2UI CCWGG 1 cut(s) 912
Bst6I CTCTTC 1 cut(s) 94
BstAFI CTTAAG 1 cut(s) 504
BstBI TTCGAA 1 cut(s) 159
BstC8I GCNNGC 1 cut(s) 24
BstDEI CTNAG 1 cut(s) 260
BstF5I GGATG 1 cut(s) 821
BstHHI GCGC 1 cut(s) 899
BstKTI GATC 2 cut(s) 119, 511
BstMBI GATC 2 cut(s) 116, 508
BstMWI GCNNNNNNNGC 2 cut(s) 896, 1011
BstNI CCWGG 1 cut(s) 912
BstNSI RCATGY 2 cut(s) 334, 777
BstSCI CCNGG 2 cut(s) 498, 910
BstSFI CTRYAG 2 cut(s) 4, 139
BstV1I GCAGC 2 cut(s) 91, 343
BstV2I GAAGAC 3 cut(s) 85, 922, 975
BstZ17I GTATAC 1 cut(s) 1045
BtsCI GGATG 1 cut(s) 821
BtsIMutI CAGTG 1 cut(s) 55
Cac8I GCNNGC 1 cut(s) 24
CciI TCATGA 1 cut(s) 488
CfoI GCGC 1 cut(s) 899
Cfr13I GGNCC 1 cut(s) 548
CseI GACGC 1 cut(s) 791
Csp6I GTAC 1 cut(s) 365
CviAII CATG 9 cut(s) 27, 250, 331, 374, 489, 552, 653, 774, 799
CviQI GTAC 1 cut(s) 365
DdeI CTNAG 1 cut(s) 260
DpnI GATC 2 cut(s) 118, 510
DpnII GATC 2 cut(s) 116, 508
Eam1104I CTCTTC 1 cut(s) 94
EarI CTCTTC 1 cut(s) 94
Eco47I GGWCC 1 cut(s) 548
Eco57I CTGAAG 2 cut(s) 118, 943
Eco88I CYCGRG 1 cut(s) 660
EcoRII CCWGG 1 cut(s) 910
FaeI CATG 9 cut(s) 30, 253, 334, 377, 492, 555, 656, 777, 802
FaqI GGGAC 1 cut(s) 691
FatI CATG 9 cut(s) 26, 249, 330, 373, 488, 551, 652, 773, 798
FblI GTMKAC 1 cut(s) 1044
Fnu4HI GCNGC 4 cut(s) 4, 105, 321, 357
FokI GGATG 1 cut(s) 828
Fsp4HI GCNGC 4 cut(s) 4, 105, 321, 357
FspBI CTAG 2 cut(s) 120, 207
GlaI GCGC 1 cut(s) 898
GluI GCNGC 4 cut(s) 4, 105, 321, 357
GsaI CCCAGC 1 cut(s) 963
GsuI CTGGAG 1 cut(s) 79
HapII CCGG 1 cut(s) 500
HgaI GACGC 1 cut(s) 791
HhaI GCGC 1 cut(s) 899
Hin1II CATG 9 cut(s) 30, 253, 334, 377, 492, 555, 656, 777, 802
Hin6I GCGC 1 cut(s) 897
HinP1I GCGC 1 cut(s) 897
HindIII AAGCTT 2 cut(s) 165, 297
HinfI GANTC 5 cut(s) 61, 156, 181, 495, 972
HpaII CCGG 1 cut(s) 500
HphI GGTGA 1 cut(s) 1087
Hpy166II GTNNAC 2 cut(s) 194, 1045
Hpy188I TCNGA 6 cut(s) 98, 155, 575, 639, 698, 830
Hpy188III TCNNGA 4 cut(s) 241, 489, 660, 987
Hpy8I GTNNAC 2 cut(s) 194, 1045
HpyAV CCTTC 2 cut(s) 453, 806
HpyCH4IV ACGT 1 cut(s) 441
HpyCH4V TGCA 5 cut(s) 6, 294, 669, 890, 1014
HpyF10VI GCNNNNNNNGC 2 cut(s) 896, 1011
HpyF3I CTNAG 1 cut(s) 260
HpySE526I ACGT 1 cut(s) 441
Hsp92II CATG 9 cut(s) 30, 253, 334, 377, 492, 555, 656, 777, 802
HspAI GCGC 1 cut(s) 897
Kzo9I GATC 2 cut(s) 116, 508
LguI GCTCTTC 1 cut(s) 94
LmnI GCTCC 2 cut(s) 662, 1034
Lsp1109I GCAGC 2 cut(s) 91, 343
MaeI CTAG 2 cut(s) 120, 207
MaeII ACGT 1 cut(s) 441
MaeIII GTNAC 3 cut(s) 62, 281, 600
MalI GATC 2 cut(s) 118, 510
MboI GATC 2 cut(s) 116, 508
MboII GAAGA 8 cut(s) 24, 87, 90, 111, 477, 927, 936, 975
MfeI CAATTG 2 cut(s) 431, 976
MluCI AATT 3 cut(s) 42, 431, 976
MlyI GAGTC 2 cut(s) 70, 966
MmeI TCCRAC 3 cut(s) 526, 617, 808
MnlI CCTC 9 cut(s) 257, 324, 335, 339, 465, 485, 668, 774, 1093
MroXI GAANNNNTTC 1 cut(s) 559
MseI TTAA 3 cut(s) 48, 229, 505
MslI CAYNNNNRTG 1 cut(s) 1100
MspA1I CMGCKG 1 cut(s) 945
MspCI CTTAAG 1 cut(s) 504
MspI CCGG 1 cut(s) 500
MspR9I CCNGG 2 cut(s) 500, 912
MunI CAATTG 2 cut(s) 431, 976
MvaI CCWGG 1 cut(s) 912
MwoI GCNNNNNNNGC 2 cut(s) 896, 1011
NciI CCSGG 1 cut(s) 500
NdeII GATC 2 cut(s) 116, 508
NlaIII CATG 9 cut(s) 30, 253, 334, 377, 492, 555, 656, 777, 802
NlaIV GGNNCC 3 cut(s) 562, 658, 841
NmuCI GTSAC 3 cut(s) 62, 281, 600
NspI RCATGY 2 cut(s) 334, 777
NspV TTCGAA 1 cut(s) 159
OliI CACNNNNGTG 1 cut(s) 1100
PagI TCATGA 1 cut(s) 488
PciSI GCTCTTC 1 cut(s) 94
PdmI GAANNNNTTC 1 cut(s) 559
PfeI GAWTC 3 cut(s) 156, 181, 495
PflMI CCANNNNNTGG 1 cut(s) 557
PfoI TCCNGGA 1 cut(s) 910
PkrI GCNGC 4 cut(s) 5, 106, 322, 358
PleI GAGTC 2 cut(s) 69, 966
PpsI GAGTC 2 cut(s) 69, 966
PsiI TTATAA 1 cut(s) 735
Psp6I CCWGG 1 cut(s) 910
PspFI CCCAGC 1 cut(s) 959
PspGI CCWGG 1 cut(s) 910
PspN4I GGNNCC 3 cut(s) 562, 658, 841
PspPI GGNCC 1 cut(s) 548
PstI CTGCAG 1 cut(s) 8
PvuII CAGCTG 1 cut(s) 945
RsaI GTAC 1 cut(s) 366
RsaNI GTAC 1 cut(s) 365
RseI CAYNNNNRTG 1 cut(s) 1100
SapI GCTCTTC 1 cut(s) 94
SaqAI TTAA 3 cut(s) 48, 229, 505
SatI GCNGC 4 cut(s) 4, 105, 321, 357
Sau3AI GATC 2 cut(s) 116, 508
Sau96I GGNCC 1 cut(s) 548
SchI GAGTC 2 cut(s) 70, 966
ScrFI CCNGG 2 cut(s) 500, 912
SfcI CTRYAG 2 cut(s) 4, 139
SfuI TTCGAA 1 cut(s) 159
SinI GGWCC 1 cut(s) 548
SmiMI CAYNNNNRTG 1 cut(s) 1100
SmlI CTYRAG 2 cut(s) 504, 726
SmoI CTYRAG 2 cut(s) 504, 726
Sse9I AATT 3 cut(s) 42, 431, 976
SsiI CCGC 2 cut(s) 320, 1054
SspMI CTAG 2 cut(s) 120, 207
StyD4I CCNGG 2 cut(s) 498, 910
TaiI ACGT 1 cut(s) 444
TaqI TCGA 1 cut(s) 159
TasI AATT 3 cut(s) 42, 431, 976
TauI GCSGC 1 cut(s) 323
TfiI GAWTC 3 cut(s) 156, 181, 495
Tru1I TTAA 3 cut(s) 48, 229, 505
Tru9I TTAA 3 cut(s) 48, 229, 505
TscAI CASTG 1 cut(s) 62
TseFI GTSAC 3 cut(s) 62, 281, 600
TseI GCWGC 3 cut(s) 3, 104, 356
Tsp45I GTSAC 3 cut(s) 62, 281, 600
TspDTI ATGAA 6 cut(s) 25, 101, 292, 362, 477, 568
TspGWI ACGGA 1 cut(s) 783
TspRI CASTG 1 cut(s) 62
Van91I CCANNNNNTGG 1 cut(s) 557
Vha464I CTTAAG 1 cut(s) 504
VpaK11BI GGWCC 1 cut(s) 548
XceI RCATGY 2 cut(s) 334, 777
XmiI GTMKAC 1 cut(s) 1044
XmnI GAANNNNTTC 1 cut(s) 559
XspI CTAG 2 cut(s) 120, 207
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.