Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0001896

Physical Location & Seq

Genomic Coordinates Forward (+)

15693713 .. 15697249

Gene Structure 3537 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1101800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1908 bp

ATGGACGACACCGCAGCCCCAGCCCCTGTCGCCGACGAGAACCCGAAGGTGAGCCCAGCTCCAATCTCAGGCTGGACCAGCATAGTTAAGAAGCAACCGGAGCCAAAGCCCCGAAACCCGGATGCTAACGCCGCAGCCCAAGTCTTGGTGGAGAGCTGCAAGTCCTCCAAGGGCATAGCCATGGCGGTGGTCGACGCCAACGCCATCATTCAAGGCGGAGAGAGCCTCAGCCATTGCGCCGACAAGCTGGTCTCTATCCCGGAAGTCATGGACGAGGTCCGCGACCCCGTTTCCCGCCACCGGCTCGCCTTTCTTCCCTTCGAAGTCCAAACCATGGAACCCTCACCTGAATGCCTCAACAAAGTTATTAAGTTTGCGAGGGCTACCGGGGATTTACAGACGCTTTCGGATGTGGATATTAAGCTCATTGCTCTGACCTATGCGTTGGAGGCTCAGATACATGGCACTGAACATCTTAGGGACTGCCCTCCCCCAGTGCACACGGTTAATGTGAAGAGGTTACCAGAGAAGGACTTGCCAGGTTGGGGCAATAATGTGCCCAATTTGGACGAGTGGGAGGCTCTGGAACATGCTGAAGAGGAGAAGTCGAACCTCGGTTCGAGAATTCTTCCTTTGAAAGATATAAACTTGAATGGGATTGATTCCAATAGTTGTTCTGTTGATGGCTCTGCAGTGGAAGTTAAAAGTGATGCTCATTCCGAAAACCAGGAGGATAGTGTGGGCACTGAAAGGAGACATAGAAGAAAGTTTCCCAAGAAGAAAGAGATAAGCATTGAAGGGAAGATGGTTTCGGCTGGGATTGATGCGTCCCAAGGACAGTTAGATGATAATGCTGATGACTGGATGCCTGCTGTCAGTCGAAGTACACATAGGAGGTTTTTGAGAAGAAAAGCTAGGCGCGAGTCTAATGAGGCATTTTCTGAAAAGGATGCTCAAGATGCAGAGGAGGAAGCTAGAGGCAAGGATCAATCGTTGCCTGTGGAATCTGAAGAAGCATGTAGTAGAATTGGAATGTTTGAGGTCATTGAGATAACAAAGACGAAGAATGGTGCTGAAGGCCTGTCTCCAACTCTAAAGCAAACGATACTGGAAGAAGATTCACTAAGGGCTCCTCAAGAAGGGAAGGATCTCAATGGGGTAGAGGCTAATGATTTCAAAGCAGAGGAAGCTACCGCTGACAAGTATGTGAATTTTTCTGTTGAAGGAGATGAAGTTGAAACGATAAATGAAGGGCTAGATCACTTGGAGATCTCAAGTGAGACTAACGAAAGTGTTGATACATCCAGTTTGAATGATGATCATAGTGAGCAAAGCTGGATGCTTAGATCCTTGTCTGAGTCTAGTGTAGCTTGTGTAACCGGTGATTTTGCAATGCAGAATGTTATTCTGCAGATGGGTTTACGGTTGGTGGCACCTGGAGGAATGCAGATCAGACAGCTGCACAGGTGGATTTTGAAGTGCCATGCATGCAATACTGTGACTGCTGAAATTGGGAAAATTTTCTGTCCAAAATGTGGAAATGGCGGTACTTTGCGCAAAGTAGCAGTTACAGTTGGTGAGAATGGCATTGTTATGGCAGCCCGTCGACCTCGGATCATATTGCGTGGCACAAGATTTTCACTGCCTCTACCTCAGGGTGGAAGGGATGCCATTTCTAAGAACCCCATTTTACGTGAAGATCAACTCCCACAAAAGTTTCTACATCCAAAGACAAAGAAGAAAGCACACAAGGAGGGAGACGACGTGTTCGCTACCAATGACTTCATCTTCTGCCACCATACCGATAAAAAAGCTCCTTTGCAGCCTCCCATAAGGAAGGCGCTAGCCGTTTTCAGTGGAAGGAGGAATCCCAACGACAATCATTACTCGCATTCTAAGCATAAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

NOB1_Zn_bind PIN_6

Protein Analysis

636

Amino Acids

69.97

Weight (kDa)

5.7

Isoelectric Point (pI)

56.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PIN_6	PF17146	63 - 149	3e-26	PIN domain of ribonuclease
Zn_ribbon_NOB1	PF08772	484 - 554	1.3e-21	Nin one binding (NOB1) Zn-ribbon like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001896)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G41190
fragaria_vesca	FvH4_5g23090
malus_domestica	MD14G1101800.v1.1
prunus_persica	Prupe.5G097400_v2.0.a1
pyrus_communis	pycom06g07650 pycom14g09860
rosa_chinensis	RchiOBHm_Chr2g0099081 RchiOBHm_Chr7g0179141 RchiOBHm_Chr7g0211871 RchiOBHm_Chr7g0211921 RchiOBHm_Chr7g0211961
rosa_laevigata	RLG00000002953 RLG00000002956 RLG00000005381 RLG00000016846 RLG00000021575
rosa_multiflora	Rmu_sc0000888.1_g000019 Rmu_sc0009005.1_g000003 Rmu_sc0017524.1_g000001 Rmu_sc0018807.1_g000007 Rmu_sc0022966.1_g000001
rosa_roxburghii	Rroxscaffold_2G00143460 Rroxscaffold_3G00247290 Rroxscaffold_3G00247320 Rroxscaffold_3G00274270 Rroxscaffold_3G00274340
rosa_rugosa	Rorug02G0076500 Rorug06G0421300 Rorug07G0129500 Rorug07G0129600
rosa_samantha	Rh2AG125600 Rh2BG128900 Rh2CG129900 Rh2DG130300 Rh7AG020500 Rh7AG262400 Rh7BG020600 Rh7BG255900 Rh7CG021700 Rh7CG278400 Rh7DG021100 Rh7DG268900 Rh7DG269200
rosa_wichuraiana	Rw7G001720 Rw7G022370 Rw7G022390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	248
Acc16I	TGCGCA	1 cut(s)	1556
AccB1I	GGYRCC	1 cut(s)	1432
AccB7I	CCANNNNNTGG	3 cut(s)	145, 334, 1535
AccI	GTMKAC	2 cut(s)	192, 1606
AccII	CGCG	2 cut(s)	282, 921
AciI	CCGC	8 cut(s)	12, 132, 185, 216, 280, 295, 1194, 1545
AclWI	GGATC	4 cut(s)	993, 1155, 1341, 1622
AcsI	RAATTY	3 cut(s)	624, 1210, 1518
AcuI	CTGAAG	3 cut(s)	615, 1029, 1095
AcyI	GRCGYC	1 cut(s)	195
AfaI	GTAC	2 cut(s)	886, 1549
AfiI	CCNNNNNNNGG	9 cut(s)	68, 118, 145, 300, 334, 545, 1139, 1535, 1658
AflIII	ACRYGT	1 cut(s)	1764
AgeI	ACCGGT	1 cut(s)	1379
AgsI	TTSAA	9 cut(s)	212, 637, 652, 797, 1177, 1223, 1238, 1312, 1477
AjiI	CACGTC	1 cut(s)	1765
AjnI	CCWGG	3 cut(s)	538, 726, 1435
Alw21I	GWGCWC	1 cut(s)	501
Alw26I	GTCTC	5 cut(s)	256, 748, 1089, 1274, 1752
Alw44I	GTGCAC	1 cut(s)	497
AlwI	GGATC	4 cut(s)	993, 1155, 1341, 1622
AlwNI	CAGNNNCTG	1 cut(s)	26
AoxI	GGCC	1 cut(s)	1078
ApaLI	GTGCAC	1 cut(s)	497
ApeKI	GCWGC	6 cut(s)	14, 134, 156, 1459, 1598, 1822
ApoI	RAATTY	3 cut(s)	624, 1210, 1518
ArsI	GACNNNNNNTTYG	2 cut(s)	1751, 1783
AsiGI	ACCGGT	1 cut(s)	1379
Asp700I	GAANNNNTTC	1 cut(s)	1520
AspLEI	GCGC	4 cut(s)	239, 921, 1557, 1843
AspS9I	GGNCC	2 cut(s)	75, 277
AsuC2I	CCSGG	3 cut(s)	119, 260, 388
AsuHPI	GGTGA	4 cut(s)	61, 336, 1394, 1589
AsuII	TTCGAA	1 cut(s)	321
AsuNHI	GCTAGC	1 cut(s)	1843
AvaII	GGWCC	2 cut(s)	75, 277
AxyI	CCTNAGG	1 cut(s)	1653
BaeGI	GKGCMC	3 cut(s)	501, 561, 746
BanI	GGYRCC	1 cut(s)	1432
BanII	GRGCYC	2 cut(s)	56, 1132
Bbv12I	GWGCWC	1 cut(s)	501
BbvCI	CCTCAGC	1 cut(s)	227
BbvI	GCAGC	6 cut(s)	26, 143, 146, 1446, 1610, 1834
BccI	CCATC	4 cut(s)	212, 677, 799, 1408
BceAI	ACGGC	1 cut(s)	1832
BciT130I	CCWGG	3 cut(s)	540, 728, 1437
BclI	TGATCA	1 cut(s)	1318
BcnI	CCSGG	3 cut(s)	119, 260, 388
BcoDI	GTCTC	5 cut(s)	256, 748, 1089, 1274, 1752
BfaI	CTAG	5 cut(s)	915, 975, 1256, 1362, 1844
BfmI	CTRYAG	2 cut(s)	690, 1409
BfoI	RGCGCY	1 cut(s)	1844
BglII	AGATCT	1 cut(s)	1269
BisI	GCNGC	7 cut(s)	15, 132, 135, 157, 1460, 1599, 1823
BlsI	GCNGC	7 cut(s)	16, 133, 136, 158, 1461, 1600, 1824
Bme1390I	CCNGG	6 cut(s)	119, 260, 388, 540, 728, 1437
Bme18I	GGWCC	2 cut(s)	75, 277
BmgBI	CACGTC	1 cut(s)	1765
BmgT120I	GGNCC	2 cut(s)	75, 277
BmiI	GGNNCC	4 cut(s)	102, 339, 1131, 1434
BmrFI	CCNGG	6 cut(s)	119, 260, 388, 540, 728, 1437
BmrI	ACTGGG	1 cut(s)	488
BmsI	GCATC	8 cut(s)	112, 700, 814, 855, 940, 949, 1329, 1657
BmtI	GCTAGC	1 cut(s)	1847
BmuI	ACTGGG	1 cut(s)	488
BplI	GAGNNNNNCTC	4 cut(s)	43, 75, 210, 242
BpmI	CTGGAG	1 cut(s)	1458
Bpu10I	CCTNAGC	1 cut(s)	227
Bpu14I	TTCGAA	1 cut(s)	321
BpuEI	CTTGAG	3 cut(s)	939, 1119, 1258
BpuMI	CCSGG	3 cut(s)	119, 260, 388
BsaAI	YACGTR	1 cut(s)	1694
BsaHI	GRCGYC	1 cut(s)	195
BsaI	GGTCTC	1 cut(s)	256
BsaJI	CCNNGG	7 cut(s)	168, 180, 333, 387, 613, 832, 1610
BsaWI	WCCGGW	2 cut(s)	97, 1379
BsaXI	ACNNNNNCTCC	4 cut(s)	1218, 1248, 1749, 1779
Bsc4I	CCNNNNNNNGG	9 cut(s)	68, 118, 145, 300, 334, 545, 1139, 1535, 1658
Bse118I	RCCGGY	2 cut(s)	300, 1379
Bse1I	ACTGG	4 cut(s)	494, 866, 1113, 1305
Bse21I	CCTNAGG	1 cut(s)	1653
Bse3DI	GCAATG	3 cut(s)	232, 426, 1398
BseBI	CCWGG	3 cut(s)	540, 728, 1437
BseDI	CCNNGG	7 cut(s)	168, 180, 333, 387, 613, 832, 1610
BseGI	GGATG	8 cut(s)	127, 415, 870, 955, 1301, 1344, 1672, 1723
BseLI	CCNNNNNNNGG	9 cut(s)	68, 118, 145, 300, 334, 545, 1139, 1535, 1658
BseMI	GCAATG	3 cut(s)	232, 426, 1398
BseMII	CTCAG	5 cut(s)	81, 241, 467, 1347, 1667
BseNI	ACTGG	4 cut(s)	494, 866, 1113, 1305
BseRI	GAGGAG	3 cut(s)	614, 980, 1122
BseSI	GKGCMC	3 cut(s)	501, 561, 746
BseXI	GCAGC	6 cut(s)	26, 143, 146, 1446, 1610, 1834
BseYI	CCCAGC	3 cut(s)	19, 55, 815
BsgI	GTGCAG	1 cut(s)	1445
Bsh1236I	CGCG	2 cut(s)	282, 921
BshFI	GGCC	1 cut(s)	1080
BshNI	GGYRCC	1 cut(s)	1432
BshTI	ACCGGT	1 cut(s)	1379
BsiHKAI	GWGCWC	1 cut(s)	501
BsiSI	CCGG	6 cut(s)	98, 119, 260, 301, 387, 1380
BslFI	GGGAC	2 cut(s)	494, 814
BslI	CCNNNNNNNGG	9 cut(s)	68, 118, 145, 300, 334, 545, 1139, 1535, 1658
BsmAI	GTCTC	5 cut(s)	256, 748, 1089, 1274, 1752
BsmBI	CGTCTC	1 cut(s)	1752
BsmFI	GGGAC	2 cut(s)	494, 814
BsmI	GAATGC	3 cut(s)	356, 1449, 1891
BsnI	GGCC	1 cut(s)	1080
Bso31I	GGTCTC	1 cut(s)	256
Bsp119I	TTCGAA	1 cut(s)	321
Bsp1286I	GDGCHC	5 cut(s)	56, 501, 561, 746, 1132
Bsp143I	GATC	9 cut(s)	985, 1147, 1258, 1269, 1318, 1346, 1449, 1614, 1699
Bsp19I	CCATGG	2 cut(s)	180, 333
BspACI	CCGC	8 cut(s)	12, 132, 185, 216, 280, 295, 1194, 1545
BspANI	GGCC	1 cut(s)	1080
BspCNI	CTCAG	5 cut(s)	80, 240, 466, 1348, 1666
BspFNI	CGCG	2 cut(s)	282, 921
BspLI	GGNNCC	4 cut(s)	102, 339, 1131, 1434
BspMAI	CTGCAG	2 cut(s)	694, 1413
BspOI	GCTAGC	1 cut(s)	1847
BspPI	GGATC	4 cut(s)	993, 1155, 1341, 1622
BspT104I	TTCGAA	1 cut(s)	321
BspT107I	GGYRCC	1 cut(s)	1432
BspTNI	GGTCTC	1 cut(s)	256
BsrDI	GCAATG	3 cut(s)	232, 426, 1398
BsrFI	RCCGGY	2 cut(s)	300, 1379
BsrI	ACTGG	4 cut(s)	494, 866, 1113, 1305
BssAI	RCCGGY	2 cut(s)	300, 1379
BssECI	CCNNGG	7 cut(s)	168, 180, 333, 387, 613, 832, 1610
BssMI	GATC	9 cut(s)	985, 1147, 1258, 1269, 1318, 1346, 1449, 1614, 1699
BssNI	GRCGYC	1 cut(s)	195
BssT1I	CCWWGG	4 cut(s)	168, 180, 333, 832
Bst2UI	CCWGG	3 cut(s)	540, 728, 1437
Bst4CI	ACNGT	5 cut(s)	505, 840, 1425, 1498, 1573
Bst6I	CTCTTC	2 cut(s)	509, 591
BstACI	GRCGYC	1 cut(s)	195
BstBAI	YACGTR	1 cut(s)	1694
BstBI	TTCGAA	1 cut(s)	321
BstC8I	GCNNGC	4 cut(s)	306, 870, 1489, 1845
BstDSI	CCRYGG	2 cut(s)	180, 333
BstEII	GGTNACC	1 cut(s)	519
BstENI	CCTNNNNNAGG	1 cut(s)	1137
BstF5I	GGATG	8 cut(s)	127, 415, 870, 955, 1301, 1344, 1672, 1723
BstFNI	CGCG	2 cut(s)	282, 921
BstH2I	RGCGCY	1 cut(s)	1844
BstHHI	GCGC	4 cut(s)	239, 921, 1557, 1843
BstKTI	GATC	9 cut(s)	988, 1150, 1261, 1272, 1321, 1349, 1452, 1617, 1702
BstMAI	GTCTC	5 cut(s)	256, 748, 1089, 1274, 1752
BstMBI	GATC	9 cut(s)	985, 1147, 1258, 1269, 1318, 1346, 1449, 1614, 1699
BstNI	CCWGG	3 cut(s)	540, 728, 1437
BstNSI	RCATGY	3 cut(s)	593, 1020, 1491
BstPI	GGTNACC	1 cut(s)	519
BstSCI	CCNGG	6 cut(s)	117, 258, 386, 538, 726, 1435
BstSFI	CTRYAG	2 cut(s)	690, 1409
BstSLI	GKGCMC	3 cut(s)	501, 561, 746
BstUI	CGCG	2 cut(s)	282, 921
BstV1I	GCAGC	6 cut(s)	26, 143, 146, 1446, 1610, 1834
BstX2I	RGATCY	3 cut(s)	1147, 1269, 1346
BstXI	CCANNNNNNTGG	1 cut(s)	187
BstYI	RGATCY	3 cut(s)	1147, 1269, 1346
Bsu36I	CCTNAGG	1 cut(s)	1653
BsuRI	GGCC	1 cut(s)	1080
BtgI	CCRYGG	2 cut(s)	180, 333
BtrI	CACGTC	1 cut(s)	1765
BtsCI	GGATG	8 cut(s)	127, 415, 870, 955, 1301, 1344, 1672, 1723
BtsI	GCAGTG	2 cut(s)	699, 1640
BtsIMutI	CAGTG	6 cut(s)	465, 501, 699, 744, 1640, 1861
Cac8I	GCNNGC	4 cut(s)	306, 870, 1489, 1845
CaiI	CAGNNNCTG	1 cut(s)	26
CfoI	GCGC	4 cut(s)	239, 921, 1557, 1843
Cfr10I	RCCGGY	2 cut(s)	300, 1379
Cfr13I	GGNCC	2 cut(s)	75, 277
CseI	GACGC	3 cut(s)	203, 409, 816
Csp6I	GTAC	2 cut(s)	885, 1548
CspAI	ACCGGT	1 cut(s)	1379
CviAII	CATG	8 cut(s)	181, 268, 334, 461, 590, 1017, 1484, 1488
CviQI	GTAC	2 cut(s)	885, 1548
DpnI	GATC	9 cut(s)	987, 1149, 1260, 1271, 1320, 1348, 1451, 1616, 1701
DpnII	GATC	9 cut(s)	985, 1147, 1258, 1269, 1318, 1346, 1449, 1614, 1699
DrdI	GACNNNNNNGTC	1 cut(s)	248
DseDI	GACNNNNNNGTC	1 cut(s)	248
Eam1104I	CTCTTC	2 cut(s)	509, 591
EarI	CTCTTC	2 cut(s)	509, 591
EciI	GGCGGA	1 cut(s)	231
Eco130I	CCWWGG	4 cut(s)	168, 180, 333, 832
Eco147I	AGGCCT	1 cut(s)	1080
Eco24I	GRGCYC	2 cut(s)	56, 1132
Eco31I	GGTCTC	1 cut(s)	256
Eco47I	GGWCC	2 cut(s)	75, 277
Eco57I	CTGAAG	3 cut(s)	615, 1029, 1095
Eco81I	CCTNAGG	1 cut(s)	1653
Eco91I	GGTNACC	1 cut(s)	519
EcoNI	CCTNNNNNAGG	1 cut(s)	1137
EcoO65I	GGTNACC	1 cut(s)	519
EcoRI	GAATTC	1 cut(s)	624
EcoRII	CCWGG	3 cut(s)	538, 726, 1435
EcoT14I	CCWWGG	4 cut(s)	168, 180, 333, 832
EcoT22I	ATGCAT	1 cut(s)	1489
EcoT38I	GRGCYC	2 cut(s)	56, 1132
ErhI	CCWWGG	4 cut(s)	168, 180, 333, 832
Esp3I	CGTCTC	1 cut(s)	1752
FaeI	CATG	8 cut(s)	184, 271, 337, 464, 593, 1020, 1487, 1491
FaqI	GGGAC	2 cut(s)	494, 814
FatI	CATG	8 cut(s)	180, 267, 333, 460, 589, 1016, 1483, 1487
FauI	CCCGC	1 cut(s)	302
FbaI	TGATCA	1 cut(s)	1318
FblI	GTMKAC	2 cut(s)	192, 1606
Fnu4HI	GCNGC	7 cut(s)	15, 132, 135, 157, 1460, 1599, 1823
FokI	GGATG	8 cut(s)	134, 422, 877, 962, 1288, 1351, 1679, 1710
FriOI	GRGCYC	2 cut(s)	56, 1132
Fsp4HI	GCNGC	7 cut(s)	15, 132, 135, 157, 1460, 1599, 1823
FspBI	CTAG	5 cut(s)	915, 975, 1256, 1362, 1844
FspI	TGCGCA	1 cut(s)	1556
GlaI	GCGC	4 cut(s)	238, 920, 1556, 1842
GluI	GCNGC	7 cut(s)	15, 132, 135, 157, 1460, 1599, 1823
GsaI	CCCAGC	3 cut(s)	23, 59, 819
GsuI	CTGGAG	1 cut(s)	1458
HaeII	RGCGCY	1 cut(s)	1844
HaeIII	GGCC	1 cut(s)	1080
HapII	CCGG	6 cut(s)	98, 119, 260, 301, 387, 1380
HgaI	GACGC	3 cut(s)	203, 409, 816
HhaI	GCGC	4 cut(s)	239, 921, 1557, 1843
Hin1I	GRCGYC	1 cut(s)	195
Hin1II	CATG	8 cut(s)	184, 271, 337, 464, 593, 1020, 1487, 1491
Hin6I	GCGC	4 cut(s)	237, 919, 1555, 1841
HinP1I	GCGC	4 cut(s)	237, 919, 1555, 1841
HincII	GTYRAC	2 cut(s)	193, 1607
HindII	GTYRAC	2 cut(s)	193, 1607
HinfI	GANTC	6 cut(s)	662, 923, 1004, 1118, 1358, 1867
HpaII	CCGG	6 cut(s)	98, 119, 260, 301, 387, 1380
HphI	GGTGA	4 cut(s)	61, 336, 1394, 1589
Hpy166II	GTNNAC	5 cut(s)	193, 499, 887, 1421, 1607
Hpy188I	TCNGA	9 cut(s)	409, 435, 456, 721, 943, 1009, 1357, 1454, 1614
Hpy188III	TCNNGA	4 cut(s)	584, 621, 956, 1136
Hpy8I	GTNNAC	5 cut(s)	193, 499, 887, 1421, 1607
Hpy99I	CGWCG	4 cut(s)	38, 197, 1608, 1766
HpyCH4III	ACNGT	5 cut(s)	505, 840, 1425, 1498, 1573
HpyCH4IV	ACGT	2 cut(s)	1693, 1764
HpySE526I	ACGT	2 cut(s)	1693, 1764
Hsp92I	GRCGYC	1 cut(s)	195
Hsp92II	CATG	8 cut(s)	184, 271, 337, 464, 593, 1020, 1487, 1491
HspAI	GCGC	4 cut(s)	237, 919, 1555, 1841
Ksp22I	TGATCA	1 cut(s)	1318
Kzo9I	GATC	9 cut(s)	985, 1147, 1258, 1269, 1318, 1346, 1449, 1614, 1699
LmnI	GCTCC	4 cut(s)	64, 100, 1135, 1819
Lsp1109I	GCAGC	6 cut(s)	26, 143, 146, 1446, 1610, 1834
LweI	GCATC	8 cut(s)	112, 700, 814, 855, 940, 949, 1329, 1657
MaeI	CTAG	5 cut(s)	915, 975, 1256, 1362, 1844
MaeII	ACGT	2 cut(s)	1693, 1764
MaeIII	GTNAC	4 cut(s)	519, 1375, 1498, 1567
MalI	GATC	9 cut(s)	987, 1149, 1260, 1271, 1320, 1348, 1451, 1616, 1701
MboI	GATC	9 cut(s)	985, 1147, 1258, 1269, 1318, 1346, 1449, 1614, 1699
MflI	RGATCY	3 cut(s)	1147, 1269, 1346
MhlI	GDGCHC	5 cut(s)	56, 501, 561, 746, 1132
MluCI	AATT	6 cut(s)	562, 624, 1026, 1210, 1509, 1518
MlyI	GAGTC	2 cut(s)	932, 1367
MmeI	TCCRAC	2 cut(s)	426, 1112
Mph1103I	ATGCAT	1 cut(s)	1489
MroXI	GAANNNNTTC	1 cut(s)	1520
MseI	TTAA	5 cut(s)	87, 369, 420, 507, 702
MslI	CAYNNNNRTG	4 cut(s)	179, 185, 349, 1592
MspA1I	CMGCKG	2 cut(s)	1196, 1459
MspI	CCGG	6 cut(s)	98, 119, 260, 301, 387, 1380
MspR9I	CCNGG	6 cut(s)	119, 260, 388, 540, 728, 1437
Mva1269I	GAATGC	3 cut(s)	356, 1449, 1891
MvaI	CCWGG	3 cut(s)	540, 728, 1437
MvnI	CGCG	2 cut(s)	282, 921
NciI	CCSGG	3 cut(s)	119, 260, 388
NcoI	CCATGG	2 cut(s)	180, 333
NdeII	GATC	9 cut(s)	985, 1147, 1258, 1269, 1318, 1346, 1449, 1614, 1699
NheI	GCTAGC	1 cut(s)	1843
NlaIII	CATG	8 cut(s)	184, 271, 337, 464, 593, 1020, 1487, 1491
NlaIV	GGNNCC	4 cut(s)	102, 339, 1131, 1434
NmuCI	GTSAC	1 cut(s)	1498
NsbI	TGCGCA	1 cut(s)	1556
NsiI	ATGCAT	1 cut(s)	1489
NspI	RCATGY	3 cut(s)	593, 1020, 1491
NspV	TTCGAA	1 cut(s)	321
PaeI	GCATGC	1 cut(s)	1491
PceI	AGGCCT	1 cut(s)	1080
PcsI	WCGNNNNNNNCGW	1 cut(s)	279
PctI	GAATGC	3 cut(s)	356, 1449, 1891
PdmI	GAANNNNTTC	1 cut(s)	1520
PfeI	GAWTC	4 cut(s)	662, 1004, 1118, 1867
PflFI	GACNNNGTC	1 cut(s)	275
PflMI	CCANNNNNTGG	3 cut(s)	145, 334, 1535
PfoI	TCCNGGA	1 cut(s)	258
PinAI	ACCGGT	1 cut(s)	1379
PkrI	GCNGC	7 cut(s)	16, 133, 136, 158, 1461, 1600, 1824
PleI	GAGTC	2 cut(s)	931, 1366
PpsI	GAGTC	2 cut(s)	931, 1366
Ppu21I	YACGTR	1 cut(s)	1694
Psp6I	CCWGG	3 cut(s)	538, 726, 1435
PspEI	GGTNACC	1 cut(s)	519
PspFI	CCCAGC	3 cut(s)	19, 55, 815
PspGI	CCWGG	3 cut(s)	538, 726, 1435
PspN4I	GGNNCC	4 cut(s)	102, 339, 1131, 1434
PspPI	GGNCC	2 cut(s)	75, 277
PstI	CTGCAG	2 cut(s)	694, 1413
PstNI	CAGNNNCTG	1 cut(s)	26
PsuI	RGATCY	3 cut(s)	1147, 1269, 1346
PsyI	GACNNNGTC	1 cut(s)	275
PvuII	CAGCTG	1 cut(s)	1459
RsaI	GTAC	2 cut(s)	886, 1549
RsaNI	GTAC	2 cut(s)	885, 1548
RseI	CAYNNNNRTG	4 cut(s)	179, 185, 349, 1592
SalI	GTCGAC	2 cut(s)	191, 1605
SaqAI	TTAA	5 cut(s)	87, 369, 420, 507, 702
SatI	GCNGC	7 cut(s)	15, 132, 135, 157, 1460, 1599, 1823
Sau3AI	GATC	9 cut(s)	985, 1147, 1258, 1269, 1318, 1346, 1449, 1614, 1699
Sau96I	GGNCC	2 cut(s)	75, 277
SchI	GAGTC	2 cut(s)	932, 1367
ScrFI	CCNGG	6 cut(s)	119, 260, 388, 540, 728, 1437
SduI	GDGCHC	5 cut(s)	56, 501, 561, 746, 1132
SfaNI	GCATC	8 cut(s)	112, 700, 814, 855, 940, 949, 1329, 1657
SfcI	CTRYAG	2 cut(s)	690, 1409
SfuI	TTCGAA	1 cut(s)	321
SinI	GGWCC	2 cut(s)	75, 277
SmiMI	CAYNNNNRTG	4 cut(s)	179, 185, 349, 1592
SmlI	CTYRAG	3 cut(s)	954, 1134, 1273
SmoI	CTYRAG	3 cut(s)	954, 1134, 1273
SphI	GCATGC	1 cut(s)	1491
Sse9I	AATT	6 cut(s)	562, 624, 1026, 1210, 1509, 1518
SseBI	AGGCCT	1 cut(s)	1080
SsiI	CCGC	8 cut(s)	12, 132, 185, 216, 280, 295, 1194, 1545
SspMI	CTAG	5 cut(s)	915, 975, 1256, 1362, 1844
StuI	AGGCCT	1 cut(s)	1080
StyD4I	CCNGG	6 cut(s)	117, 258, 386, 538, 726, 1435
StyI	CCWWGG	4 cut(s)	168, 180, 333, 832
TaaI	ACNGT	5 cut(s)	505, 840, 1425, 1498, 1573
TaiI	ACGT	2 cut(s)	1696, 1767
TaqI	TCGA	6 cut(s)	192, 321, 608, 620, 880, 1606
TasI	AATT	6 cut(s)	562, 624, 1026, 1210, 1509, 1518
TatI	WGTACW	1 cut(s)	884
TauI	GCSGC	1 cut(s)	134
TfiI	GAWTC	4 cut(s)	662, 1004, 1118, 1867
Tru1I	TTAA	5 cut(s)	87, 369, 420, 507, 702
Tru9I	TTAA	5 cut(s)	87, 369, 420, 507, 702
TscAI	CASTG	6 cut(s)	472, 501, 699, 751, 1647, 1861
TseFI	GTSAC	1 cut(s)	1498
TseI	GCWGC	6 cut(s)	14, 134, 156, 1459, 1598, 1822
Tsp45I	GTSAC	1 cut(s)	1498
TspDTI	ATGAA	3 cut(s)	1245, 1263, 1774
TspRI	CASTG	6 cut(s)	472, 501, 699, 751, 1647, 1861
Tth111I	GACNNNGTC	1 cut(s)	275
Van91I	CCANNNNNTGG	3 cut(s)	145, 334, 1535
VneI	GTGCAC	1 cut(s)	497
VpaK11BI	GGWCC	2 cut(s)	75, 277
XagI	CCTNNNNNAGG	1 cut(s)	1137
XapI	RAATTY	3 cut(s)	624, 1210, 1518
XceI	RCATGY	3 cut(s)	593, 1020, 1491
XcmI	CCANNNNNNNNNTGG	1 cut(s)	69
XmiI	GTMKAC	2 cut(s)	192, 1606
XmnI	GAANNNNTTC	1 cut(s)	1520
XspI	CTAG	5 cut(s)	915, 975, 1256, 1362, 1844
Zsp2I	ATGCAT	1 cut(s)	1489

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.