Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0001896

Physical Location & Seq

Genomic Coordinates Reverse (-)

23302408 .. 23305699

Gene Structure 3292 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG255900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1815 bp

ATGGACGCCACCGTCACCCCAGCCTCAATCCCCGACCCGAACCCGAACCCGAACGCCGCCCCAGCCGTCTCCTGTTGGAGCAACATCGTGAAGAAGCAGCCGGACCCAAAGCCCCAAAACTCCTCCGACTCCTCAATCGCCGCCGGCAAAGTATTCGTCGAAAGCTGTAAGTCCTCCAAGGGCATAGCCGTCGCCGTCGTCGACGCCAATGCTATCATTCAAGGCGGCGAGACCCTCGCCCACTGCGCCGACAAGTTCGTCTCCGTCCCAGAGGTCATGGACGAGGTCCGTGACCCTGTTTCCCGCCACCGCCTCGCCGTCGTTCCCTTCCAAGTCCAGACCATGGAACCCTCCCCTGAATCCCTCAATAAAGTTGTTAAGTTTGCGAGGGCTACTGGGGATTTACAGACACTGTCAGATGTGGATGTTAAGCTCATTGCTATGACTTATACATTGGAGGCTCAGATACATGGCACTGAGCACCTCAGGGACTGTCCTCCGCCGGTGCATACTGTCAATGTGAGGAGGTTGCCGGAGAAGGACCTGCCCGGGTGGGGAAATAATGTGCCTAATTTGGAAGAGTGGGAAGCGCTGGAGAACGAAGCGGAGGATAAGTTGAACCCCAGTTCGAGGATTCTTCCGCTGAAAGATATAAACTTGAATGTTATTGAGGATTCTGAGAGCCGTTCTGTTGATGGTTCTGTGGTGCAAGTTAGGAGTGATGTTCGTTCTGAGAATCAGGAGGGTGGTGAGGGCATTCAGGGGAGACATAGGAGATATTTTCCAAAGAAGAAAGAGATAAAGATTGAAGGGAAGATGGTTTCTGATGGAATTGATGCATCCCAAGGACAAGCTGATGATAATGCCGGTGATTGGATGCCTGCCGTCAGTCGGAGTACACATAGAAGGTTTTTGAGAAGAAAAGCTAGACGTGAGTCTTATGAGGCATCGGCTGATAATGATTCTCAGCAAGATGCTGAGGAAAACACCAGTGGTGACGTACTTGTAGATGCTAGGAGCCAGGATCAAACATCGCCTTCTAAATTTGAAGAGGCATGTTGCCGACCTGTGGAGAGTGAGATGACAGAAGAGAAGAATTGTGATGAAGATCTTTCCTCAATCCTTGAGCAAACAAGGCGTGATGAAGATTCACTAACGGCTCTTCAAAAAGGGAAGGAGCAGCATGGGGTTGAGGATAATGATTTCAAATCAGGGGAAAGCACTTCTGATAACGGTGTGAATTTTGCTGTTGAGGGAGATGAGGTTGAAGTGATAAATGAAGGTCTGGATCACTTGGAGATCTCAAGTCATAATGATGGTAGTGTTGATACATCAAATGTTAACGATGATAGCAGTGAGCAGAGCTGGATGCTGCGATCCTTGTCTGAGTCTAGTGTAGCATGTATAACAAGTGATTTTGCAATGCAAAATGTTATTCTGCAGATGGGTTTACGGTTGTTGGCACCAGGAGGAATGCAGATCCGCCAGCTGCACAGGTGGATTTTGAAATGCCATGCTTGTAACACTGTGACTGCTGAAATTGGGAGAATATTTTGTCCAAAGTGTGGAAATGGTGGTACCTTGCGCAAGGTAGCAGTTACAGTGGGTGAGAATGGGATTATTCTTGCGGCACGTAAGCCTCGGATCACGTTGCGTGGCACAAGATTTTCACTTCCTTTACCTCAAGGTGGAAGAAATGCCATTACTAAGAACCCTGTTTTACGTGAGGATCAGCTCCCACAAAAGTACCTTCATCCAAAGACAAAAATGAAAGCAAATAAGCCGGTAAAATTTCAATTTTTGGTGTTTATCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

NOB1_Zn_bind PIN_6

Protein Analysis

604

Amino Acids

66.49

Weight (kDa)

5.26

Isoelectric Point (pI)

59.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PIN_6	PF17146	66 - 152	4.8e-26	PIN domain of ribonuclease
Zn_ribbon_NOB1	PF08772	494 - 564	6e-22	Nin one binding (NOB1) Zn-ribbon like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001896)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G41190
fragaria_vesca	FvH4_5g23090
malus_domestica	MD14G1101800.v1.1
prunus_persica	Prupe.5G097400_v2.0.a1
pyrus_communis	pycom06g07650 pycom14g09860
rosa_chinensis	RchiOBHm_Chr2g0099081 RchiOBHm_Chr7g0179141 RchiOBHm_Chr7g0211871 RchiOBHm_Chr7g0211921 RchiOBHm_Chr7g0211961
rosa_laevigata	RLG00000002953 RLG00000002956 RLG00000005381 RLG00000016846 RLG00000021575
rosa_multiflora	Rmu_sc0000888.1_g000019 Rmu_sc0009005.1_g000003 Rmu_sc0017524.1_g000001 Rmu_sc0018807.1_g000007 Rmu_sc0022966.1_g000001
rosa_roxburghii	Rroxscaffold_2G00143460 Rroxscaffold_3G00247290 Rroxscaffold_3G00247320 Rroxscaffold_3G00274270 Rroxscaffold_3G00274340
rosa_rugosa	Rorug02G0076500 Rorug06G0421300 Rorug07G0129500 Rorug07G0129600
rosa_samantha	Rh2AG125600 Rh2BG128900 Rh2CG129900 Rh2DG130300 Rh7AG020500 Rh7AG262400 Rh7BG020600 Rh7BG255900 Rh7CG021700 Rh7CG278400 Rh7DG021100 Rh7DG268900 Rh7DG269200
rosa_wichuraiana	Rw7G001720 Rw7G022370 Rw7G022390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	11, 257
Acc16I	TGCGCA	1 cut(s)	1586
Acc36I	ACCTGC	1 cut(s)	552
Acc65I	GGTACC	1 cut(s)	1577
AccB1I	GGYRCC	2 cut(s)	1462, 1577
AccB7I	CCANNNNNTGG	2 cut(s)	343, 1565
AccI	GTMKAC	1 cut(s)	201
AclWI	GGATC	6 cut(s)	1032, 1296, 1371, 1474, 1652, 1737
AcsI	RAATTY	3 cut(s)	1043, 1240, 1790
AcyI	GRCGYC	2 cut(s)	6, 204
AfaI	GTAC	4 cut(s)	898, 1002, 1579, 1748
AfeI	AGCGCT	1 cut(s)	591
AfiI	CCNNNNNNNGG	8 cut(s)	343, 554, 630, 873, 891, 1069, 1565, 1688
AjiI	CACGTC	1 cut(s)	932
AjnI	CCWGG	2 cut(s)	1020, 1465
AluBI	AGCT	7 cut(s)	165, 433, 854, 926, 1365, 1489, 1735
AluI	AGCT	7 cut(s)	165, 433, 854, 926, 1365, 1489, 1735
Alw21I	GWGCWC	1 cut(s)	483
Alw26I	GTCTC	4 cut(s)	73, 224, 265, 760
AlwI	GGATC	6 cut(s)	1032, 1296, 1371, 1474, 1652, 1737
AlwNI	CAGNNNCTG	2 cut(s)	412, 492
Ama87I	CYCGRG	1 cut(s)	548
Aor51HI	AGCGCT	1 cut(s)	591
ApeKI	GCWGC	4 cut(s)	97, 1180, 1372, 1489
ApoI	RAATTY	3 cut(s)	1043, 1240, 1790
ArsI	GACNNNNNNTTYG	2 cut(s)	141, 173
Asp718I	GGTACC	1 cut(s)	1577
AspLEI	GCGC	3 cut(s)	248, 592, 1587
AspS9I	GGNCC	3 cut(s)	103, 286, 541
AsuC2I	CCSGG	2 cut(s)	549, 550
AsuHPI	GGTGA	5 cut(s)	7, 761, 881, 1007, 1619
AvaI	CYCGRG	1 cut(s)	548
AvaII	GGWCC	3 cut(s)	103, 286, 541
AxyI	CCTNAGG	1 cut(s)	485
BaeI	ACNNNNGTAYC	2 cut(s)	1730, 1763
BanI	GGYRCC	2 cut(s)	1462, 1577
Bbv12I	GWGCWC	1 cut(s)	483
BbvCI	CCTCAGC	1 cut(s)	978
BbvI	GCAGC	4 cut(s)	109, 1192, 1359, 1476
BccI	CCATC	5 cut(s)	689, 811, 821, 1310, 1438
BceAI	ACGGC	7 cut(s)	50, 173, 179, 302, 669, 869, 1173
BcgI	CGANNNNNNTGC	6 cut(s)	136, 170, 172, 191, 206, 225
BciT130I	CCWGG	2 cut(s)	1022, 1467
BcnI	CCSGG	2 cut(s)	549, 550
BcoDI	GTCTC	4 cut(s)	73, 224, 265, 760
BfaI	CTAG	4 cut(s)	927, 1014, 1392, 1813
BfmI	CTRYAG	1 cut(s)	1439
BfoI	RGCGCY	1 cut(s)	593
BfuAI	ACCTGC	1 cut(s)	552
BglII	AGATCT	2 cut(s)	1108, 1299
BisI	GCNGC	8 cut(s)	57, 98, 141, 226, 1181, 1373, 1490, 1629
BlsI	GCNGC	8 cut(s)	58, 99, 142, 227, 1182, 1374, 1491, 1630
Bme1390I	CCNGG	4 cut(s)	549, 550, 1022, 1467
Bme18I	GGWCC	3 cut(s)	103, 286, 541
BmeT110I	CYCGRG	1 cut(s)	548
BmgBI	CACGTC	1 cut(s)	932
BmgT120I	GGNCC	3 cut(s)	103, 286, 541
BmiI	GGNNCC	5 cut(s)	105, 348, 1019, 1464, 1579
BmrFI	CCNGG	4 cut(s)	549, 550, 1022, 1467
BmrI	ACTGGG	2 cut(s)	405, 618
BmsI	GCATC	7 cut(s)	826, 848, 867, 956, 964, 1000, 1359
BmuI	ACTGGG	2 cut(s)	405, 618
BoxI	GACNNNNGTC	1 cut(s)	934
BpmI	CTGGAG	1 cut(s)	614
Bpu10I	CCTNAGC	1 cut(s)	978
BpuEI	CTTGAG	3 cut(s)	1145, 1288, 1668
BpuMI	CCSGG	2 cut(s)	549, 550
BsaAI	YACGTR	2 cut(s)	1634, 1724
BsaBI	GATNNNNATC	1 cut(s)	1107
BsaHI	GRCGYC	2 cut(s)	6, 204
BsaI	GGTCTC	1 cut(s)	224
BsaJI	CCNNGG	5 cut(s)	177, 342, 548, 844, 1640
BsaXI	ACNNNNNCTCC	4 cut(s)	599, 629, 1248, 1278
Bsc4I	CCNNNNNNNGG	8 cut(s)	343, 554, 630, 873, 891, 1069, 1565, 1688
Bse118I	RCCGGY	4 cut(s)	143, 502, 866, 1783
Bse1I	ACTGG	3 cut(s)	400, 624, 990
Bse21I	CCTNAGG	1 cut(s)	485
Bse3DI	GCAATG	2 cut(s)	435, 1428
Bse8I	GATNNNNATC	1 cut(s)	1107
BseBI	CCWGG	2 cut(s)	1022, 1467
BseDI	CCNNGG	5 cut(s)	177, 342, 548, 844, 1640
BseGI	GGATG	5 cut(s)	430, 839, 882, 1374, 1753
BseJI	GATNNNNATC	1 cut(s)	1107
BseLI	CCNNNNNNNGG	8 cut(s)	343, 554, 630, 873, 891, 1069, 1565, 1688
BseMI	GCAATG	2 cut(s)	435, 1428
BseMII	CTCAG	8 cut(s)	468, 476, 499, 669, 723, 969, 980, 1377
BseNI	ACTGG	3 cut(s)	400, 624, 990
BseRI	GAGGAG	3 cut(s)	112, 121, 538
BseXI	GCAGC	4 cut(s)	109, 1192, 1359, 1476
BseYI	CCCAGC	2 cut(s)	19, 61
BsgI	GTGCAG	1 cut(s)	1475
BshNI	GGYRCC	2 cut(s)	1462, 1577
BsiHKAI	GWGCWC	1 cut(s)	483
BsiHKCI	CYCGRG	1 cut(s)	548
BsiSI	CCGG	7 cut(s)	101, 144, 503, 533, 549, 867, 1784
BslFI	GGGAC	2 cut(s)	251, 503
BslI	CCNNNNNNNGG	8 cut(s)	343, 554, 630, 873, 891, 1069, 1565, 1688
BsmAI	GTCTC	4 cut(s)	73, 224, 265, 760
BsmBI	CGTCTC	2 cut(s)	73, 265
BsmFI	GGGAC	2 cut(s)	251, 503
BsmI	GAATGC	2 cut(s)	756, 1479
Bso31I	GGTCTC	1 cut(s)	224
BsoBI	CYCGRG	1 cut(s)	548
Bsp1286I	GDGCHC	1 cut(s)	483
Bsp143I	GATC	8 cut(s)	1024, 1108, 1288, 1299, 1376, 1479, 1644, 1729
Bsp19I	CCATGG	1 cut(s)	342
BspCNI	CTCAG	8 cut(s)	469, 475, 498, 670, 724, 970, 979, 1378
BspLI	GGNNCC	5 cut(s)	105, 348, 1019, 1464, 1579
BspMAI	CTGCAG	1 cut(s)	1443
BspMI	ACCTGC	1 cut(s)	552
BspPI	GGATC	6 cut(s)	1032, 1296, 1371, 1474, 1652, 1737
BspQI	GCTCTTC	1 cut(s)	1167
BspT107I	GGYRCC	2 cut(s)	1462, 1577
BspTNI	GGTCTC	1 cut(s)	224
BsrDI	GCAATG	2 cut(s)	435, 1428
BsrFI	RCCGGY	4 cut(s)	143, 502, 866, 1783
BsrI	ACTGG	3 cut(s)	400, 624, 990
BssAI	RCCGGY	4 cut(s)	143, 502, 866, 1783
BssECI	CCNNGG	5 cut(s)	177, 342, 548, 844, 1640
BssMI	GATC	8 cut(s)	1024, 1108, 1288, 1299, 1376, 1479, 1644, 1729
BssNI	GRCGYC	2 cut(s)	6, 204
BssT1I	CCWWGG	3 cut(s)	177, 342, 844
Bst2UI	CCWGG	2 cut(s)	1022, 1467
Bst4CI	ACNGT	8 cut(s)	13, 414, 494, 514, 1235, 1455, 1528, 1603
Bst6I	CTCTTC	4 cut(s)	573, 1044, 1083, 1167
BstACI	GRCGYC	2 cut(s)	6, 204
BstBAI	YACGTR	2 cut(s)	1634, 1724
BstC8I	GCNNGC	3 cut(s)	145, 882, 1487
BstDEI	CTNAG	9 cut(s)	462, 477, 485, 678, 732, 966, 978, 1386, 1707
BstDSI	CCRYGG	1 cut(s)	342
BstF5I	GGATG	5 cut(s)	430, 839, 882, 1374, 1753
BstH2I	RGCGCY	1 cut(s)	593
BstHHI	GCGC	3 cut(s)	248, 592, 1587
BstKTI	GATC	8 cut(s)	1027, 1111, 1291, 1302, 1379, 1482, 1647, 1732
BstMAI	GTCTC	4 cut(s)	73, 224, 265, 760
BstMBI	GATC	8 cut(s)	1024, 1108, 1288, 1299, 1376, 1479, 1644, 1729
BstMWI	GCNNNNNNNGC	3 cut(s)	62, 245, 1135
BstNI	CCWGG	2 cut(s)	1022, 1467
BstNSI	RCATGY	2 cut(s)	1059, 1404
BstPAI	GACNNNNGTC	1 cut(s)	934
BstSCI	CCNGG	4 cut(s)	547, 548, 1020, 1465
BstSFI	CTRYAG	1 cut(s)	1439
BstV1I	GCAGC	4 cut(s)	109, 1192, 1359, 1476
BstX2I	RGATCY	3 cut(s)	1108, 1299, 1479
BstYI	RGATCY	3 cut(s)	1108, 1299, 1479
Bsu36I	CCTNAGG	1 cut(s)	485
BtgI	CCRYGG	1 cut(s)	342
BtgZI	GCGATG	1 cut(s)	1017
BtrI	CACGTC	1 cut(s)	932
BtsCI	GGATG	5 cut(s)	430, 839, 882, 1374, 1753
BtsI	GCAGTG	2 cut(s)	241, 1360
BtsIMutI	CAGTG	7 cut(s)	241, 410, 474, 997, 1360, 1524, 1608
BveI	ACCTGC	1 cut(s)	552
Cac8I	GCNNGC	3 cut(s)	145, 882, 1487
CaiI	CAGNNNCTG	2 cut(s)	412, 492
CfoI	GCGC	3 cut(s)	248, 592, 1587
Cfr10I	RCCGGY	4 cut(s)	143, 502, 866, 1783
Cfr13I	GGNCC	3 cut(s)	103, 286, 541
Cfr9I	CCCGGG	1 cut(s)	548
CseI	GACGC	2 cut(s)	14, 212
Csp6I	GTAC	4 cut(s)	897, 1001, 1578, 1747
CviAII	CATG	7 cut(s)	277, 343, 470, 1056, 1184, 1401, 1514
CviQI	GTAC	4 cut(s)	897, 1001, 1578, 1747
DdeI	CTNAG	9 cut(s)	462, 477, 485, 678, 732, 966, 978, 1386, 1707
DpnI	GATC	8 cut(s)	1026, 1110, 1290, 1301, 1378, 1481, 1646, 1731
DpnII	GATC	8 cut(s)	1024, 1108, 1288, 1299, 1376, 1479, 1644, 1729
DrdI	GACNNNNNNGTC	2 cut(s)	11, 257
DseDI	GACNNNNNNGTC	2 cut(s)	11, 257
Eam1104I	CTCTTC	4 cut(s)	573, 1044, 1083, 1167
EarI	CTCTTC	4 cut(s)	573, 1044, 1083, 1167
EciI	GGCGGA	2 cut(s)	489, 1472
Eco130I	CCWWGG	3 cut(s)	177, 342, 844
Eco31I	GGTCTC	1 cut(s)	224
Eco47I	GGWCC	3 cut(s)	103, 286, 541
Eco47III	AGCGCT	1 cut(s)	591
Eco81I	CCTNAGG	1 cut(s)	485
Eco88I	CYCGRG	1 cut(s)	548
EcoO109I	RGGNCCY	1 cut(s)	541
EcoRII	CCWGG	2 cut(s)	1020, 1465
EcoT14I	CCWWGG	3 cut(s)	177, 342, 844
EcoT22I	ATGCAT	1 cut(s)	841
ErhI	CCWWGG	3 cut(s)	177, 342, 844
Esp3I	CGTCTC	2 cut(s)	73, 265
FaeI	CATG	7 cut(s)	280, 346, 473, 1059, 1187, 1404, 1517
FaqI	GGGAC	2 cut(s)	251, 503
FatI	CATG	7 cut(s)	276, 342, 469, 1055, 1183, 1400, 1513
FauI	CCCGC	1 cut(s)	311
FblI	GTMKAC	1 cut(s)	201
Fnu4HI	GCNGC	8 cut(s)	57, 98, 141, 226, 1181, 1373, 1490, 1629
FokI	GGATG	5 cut(s)	437, 826, 889, 1381, 1740
Fsp4HI	GCNGC	8 cut(s)	57, 98, 141, 226, 1181, 1373, 1490, 1629
FspBI	CTAG	4 cut(s)	927, 1014, 1392, 1813
FspI	TGCGCA	1 cut(s)	1586
GlaI	GCGC	3 cut(s)	247, 591, 1586
GluI	GCNGC	8 cut(s)	57, 98, 141, 226, 1181, 1373, 1490, 1629
GsaI	CCCAGC	2 cut(s)	23, 65
GsuI	CTGGAG	1 cut(s)	614
HaeII	RGCGCY	1 cut(s)	593
HapII	CCGG	7 cut(s)	101, 144, 503, 533, 549, 867, 1784
HgaI	GACGC	2 cut(s)	14, 212
HhaI	GCGC	3 cut(s)	248, 592, 1587
Hin1I	GRCGYC	2 cut(s)	6, 204
Hin1II	CATG	7 cut(s)	280, 346, 473, 1059, 1187, 1404, 1517
Hin6I	GCGC	3 cut(s)	246, 590, 1585
HinP1I	GCGC	3 cut(s)	246, 590, 1585
HincII	GTYRAC	2 cut(s)	202, 1342
HindII	GTYRAC	2 cut(s)	202, 1342
HinfI	GANTC	9 cut(s)	128, 359, 634, 674, 736, 935, 962, 1148, 1388
HpaI	GTTAAC	1 cut(s)	1342
HpaII	CCGG	7 cut(s)	101, 144, 503, 533, 549, 867, 1784
HphI	GGTGA	5 cut(s)	7, 761, 881, 1007, 1619
Hpy166II	GTNNAC	4 cut(s)	202, 899, 1342, 1451
Hpy188III	TCNNGA	4 cut(s)	88, 337, 740, 1286
Hpy8I	GTNNAC	4 cut(s)	202, 899, 1342, 1451
Hpy99I	CGWCG	6 cut(s)	161, 194, 200, 203, 206, 323
HpyAV	CCTTC	8 cut(s)	337, 532, 803, 900, 1047, 1168, 1274, 1760
HpyCH4III	ACNGT	8 cut(s)	13, 414, 494, 514, 1235, 1455, 1528, 1603
HpyCH4IV	ACGT	5 cut(s)	931, 999, 1633, 1649, 1723
HpyCH4V	TGCA	8 cut(s)	508, 709, 839, 1421, 1426, 1441, 1477, 1492
HpyF10VI	GCNNNNNNNGC	3 cut(s)	62, 245, 1135
HpyF3I	CTNAG	9 cut(s)	462, 477, 485, 678, 732, 966, 978, 1386, 1707
HpySE526I	ACGT	5 cut(s)	931, 999, 1633, 1649, 1723
Hsp92I	GRCGYC	2 cut(s)	6, 204
Hsp92II	CATG	7 cut(s)	280, 346, 473, 1059, 1187, 1404, 1517
HspAI	GCGC	3 cut(s)	246, 590, 1585
KpnI	GGTACC	1 cut(s)	1581
KroI	GCCGGC	1 cut(s)	143
KroNI	GCCGGC	1 cut(s)	145
KspAI	GTTAAC	1 cut(s)	1342
Kzo9I	GATC	8 cut(s)	1024, 1108, 1288, 1299, 1376, 1479, 1644, 1729
LguI	GCTCTTC	1 cut(s)	1167
LmnI	GCTCC	4 cut(s)	78, 1017, 1177, 1740
Lsp1109I	GCAGC	4 cut(s)	109, 1192, 1359, 1476
LweI	GCATC	7 cut(s)	826, 848, 867, 956, 964, 1000, 1359
MaeI	CTAG	4 cut(s)	927, 1014, 1392, 1813
MaeII	ACGT	5 cut(s)	931, 999, 1633, 1649, 1723
MaeIII	GTNAC	6 cut(s)	13, 290, 995, 1520, 1528, 1597
MalI	GATC	8 cut(s)	1026, 1110, 1290, 1301, 1378, 1481, 1646, 1731
MboI	GATC	8 cut(s)	1024, 1108, 1288, 1299, 1376, 1479, 1644, 1729
MflI	RGATCY	3 cut(s)	1108, 1299, 1479
MhlI	GDGCHC	1 cut(s)	483
MluCI	AATT	8 cut(s)	571, 831, 1043, 1096, 1240, 1539, 1790, 1796
MlyI	GAGTC	3 cut(s)	122, 944, 1397
MmeI	TCCRAC	3 cut(s)	56, 150, 872
Mph1103I	ATGCAT	1 cut(s)	841
MroNI	GCCGGC	1 cut(s)	143
MseI	TTAA	3 cut(s)	378, 429, 1341
MslI	CAYNNNNRTG	2 cut(s)	440, 1314
MspA1I	CMGCKG	2 cut(s)	643, 1489
MspI	CCGG	7 cut(s)	101, 144, 503, 533, 549, 867, 1784
MspR9I	CCNGG	4 cut(s)	549, 550, 1022, 1467
Mva1269I	GAATGC	2 cut(s)	756, 1479
MvaI	CCWGG	2 cut(s)	1022, 1467
MwoI	GCNNNNNNNGC	3 cut(s)	62, 245, 1135
NaeI	GCCGGC	1 cut(s)	145
NciI	CCSGG	2 cut(s)	549, 550
NcoI	CCATGG	1 cut(s)	342
NdeII	GATC	8 cut(s)	1024, 1108, 1288, 1299, 1376, 1479, 1644, 1729
NgoMIV	GCCGGC	1 cut(s)	143
NlaIII	CATG	7 cut(s)	280, 346, 473, 1059, 1187, 1404, 1517
NlaIV	GGNNCC	5 cut(s)	105, 348, 1019, 1464, 1579
NmuCI	GTSAC	4 cut(s)	13, 290, 995, 1528
NsbI	TGCGCA	1 cut(s)	1586
NsiI	ATGCAT	1 cut(s)	841
NspI	RCATGY	2 cut(s)	1059, 1404
PciSI	GCTCTTC	1 cut(s)	1167
PcsI	WCGNNNNNNNCGW	1 cut(s)	198
PctI	GAATGC	2 cut(s)	756, 1479
PdiI	GCCGGC	1 cut(s)	145
PfeI	GAWTC	6 cut(s)	359, 634, 674, 736, 962, 1148
PflFI	GACNNNGTC	2 cut(s)	284, 412
PflMI	CCANNNNNTGG	2 cut(s)	343, 1565
PkrI	GCNGC	8 cut(s)	58, 99, 142, 227, 1182, 1374, 1491, 1630
PleI	GAGTC	3 cut(s)	122, 943, 1396
PpsI	GAGTC	3 cut(s)	122, 943, 1396
Ppu21I	YACGTR	2 cut(s)	1634, 1724
PpuMI	RGGWCCY	1 cut(s)	541
PshAI	GACNNNNGTC	1 cut(s)	934
Psp5II	RGGWCCY	1 cut(s)	541
Psp6I	CCWGG	2 cut(s)	1020, 1465
PspFI	CCCAGC	2 cut(s)	19, 61
PspGI	CCWGG	2 cut(s)	1020, 1465
PspN4I	GGNNCC	5 cut(s)	105, 348, 1019, 1464, 1579
PspPI	GGNCC	3 cut(s)	103, 286, 541
PspPPI	RGGWCCY	1 cut(s)	541
PstI	CTGCAG	1 cut(s)	1443
PstNI	CAGNNNCTG	2 cut(s)	412, 492
PsuI	RGATCY	3 cut(s)	1108, 1299, 1479
PsyI	GACNNNGTC	2 cut(s)	284, 412
PvuII	CAGCTG	1 cut(s)	1489
RsaI	GTAC	4 cut(s)	898, 1002, 1579, 1748
RsaNI	GTAC	4 cut(s)	897, 1001, 1578, 1747
RseI	CAYNNNNRTG	2 cut(s)	440, 1314
SalI	GTCGAC	1 cut(s)	200
SapI	GCTCTTC	1 cut(s)	1167
SaqAI	TTAA	3 cut(s)	378, 429, 1341
SatI	GCNGC	8 cut(s)	57, 98, 141, 226, 1181, 1373, 1490, 1629
Sau3AI	GATC	8 cut(s)	1024, 1108, 1288, 1299, 1376, 1479, 1644, 1729
Sau96I	GGNCC	3 cut(s)	103, 286, 541
SchI	GAGTC	3 cut(s)	122, 944, 1397
ScrFI	CCNGG	4 cut(s)	549, 550, 1022, 1467
SduI	GDGCHC	1 cut(s)	483
SfaNI	GCATC	7 cut(s)	826, 848, 867, 956, 964, 1000, 1359
SfcI	CTRYAG	1 cut(s)	1439
SgrAI	CRCCGGYG	1 cut(s)	502
SgrDI	CGTCGACG	1 cut(s)	200
SinI	GGWCC	3 cut(s)	103, 286, 541
SmaI	CCCGGG	1 cut(s)	550
SmiMI	CAYNNNNRTG	2 cut(s)	440, 1314
SmlI	CTYRAG	3 cut(s)	1124, 1303, 1683
SmoI	CTYRAG	3 cut(s)	1124, 1303, 1683
Sse9I	AATT	8 cut(s)	571, 831, 1043, 1096, 1240, 1539, 1790, 1796
SspI	AATATT	1 cut(s)	1551
SspMI	CTAG	4 cut(s)	927, 1014, 1392, 1813
StyD4I	CCNGG	4 cut(s)	547, 548, 1020, 1465
StyI	CCWWGG	3 cut(s)	177, 342, 844
TaaI	ACNGT	8 cut(s)	13, 414, 494, 514, 1235, 1455, 1528, 1603
TaiI	ACGT	5 cut(s)	934, 1002, 1636, 1652, 1726
TaqI	TCGA	3 cut(s)	159, 201, 629
TasI	AATT	8 cut(s)	571, 831, 1043, 1096, 1240, 1539, 1790, 1796
TatI	WGTACW	1 cut(s)	896
TauI	GCSGC	4 cut(s)	59, 143, 228, 1631
TfiI	GAWTC	6 cut(s)	359, 634, 674, 736, 962, 1148
Tru1I	TTAA	3 cut(s)	378, 429, 1341
Tru9I	TTAA	3 cut(s)	378, 429, 1341
TscAI	CASTG	7 cut(s)	248, 417, 481, 997, 1360, 1531, 1608
TseFI	GTSAC	4 cut(s)	13, 290, 995, 1528
TseI	GCWGC	4 cut(s)	97, 1180, 1372, 1489
Tsp45I	GTSAC	4 cut(s)	13, 290, 995, 1528
TspDTI	ATGAA	5 cut(s)	1119, 1158, 1293, 1742, 1784
TspGWI	ACGGA	2 cut(s)	253, 278
TspMI	CCCGGG	1 cut(s)	548
TspRI	CASTG	7 cut(s)	248, 417, 481, 997, 1360, 1531, 1608
Tth111I	GACNNNGTC	2 cut(s)	284, 412
Van91I	CCANNNNNTGG	2 cut(s)	343, 1565
VpaK11BI	GGWCC	3 cut(s)	103, 286, 541
XapI	RAATTY	3 cut(s)	1043, 1240, 1790
XceI	RCATGY	2 cut(s)	1059, 1404
XmaI	CCCGGG	1 cut(s)	548
XmiI	GTMKAC	1 cut(s)	201
XspI	CTAG	4 cut(s)	927, 1014, 1392, 1813
Zsp2I	ATGCAT	1 cut(s)	841

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.