Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0001896

Physical Location & Seq

Genomic Coordinates Reverse (-)

1709486 .. 1716390

Gene Structure 6905 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG021100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1821 bp

ATGCTCCATTCAATGATGGCGGCGGCGAGTGGCTTTGAGCGTCGTCGTTTTTGTCATGACTCTATTGCCCAAAGCTGGGCGGCTTGGGTCCGATATGCAGGTGAAGAAAGAGGCTCAGATTCTACAGACGCCGGCGATGGGTGCCTGCTTCGATCCACAATGTCAAGGGCACGAAATCTCGTACTCTGTCCTCAAGGAGCGGTGGCCGAAGATACTGGCGTGATGGCTACCGGTGTGGGGATGCAAACTTTTGGTGGGGTGTCCAAAGCAGCCCCAGTCTCCAGTTGGAGCAACATCGTGAAGAAGCAGCCGGACCCAAAGCCCCAAAACTTCTCCTCCTCCTCAATCGCCACCACCAAAGTCTTGGTCGAAAGCTGCAAGTCCTCCCAGGGCATAGCCGTCGCCGTCGTCGACGCCAATGCTATCATTCAAGGCGGCGAGACCCTCGCCCACTGCGCCGACAAGTTCGTCTCCGTCCCCGAGGTCATCATCAACGAGGTCCGTGACCCTATTTCCCGCCACCGCCTCGCCGCCCTTCCCTTCCAAGTCCACACCATGGAGCCCTCCCCTGAATCCCGCGATAAAGTTGATAAGTTTGCGAGGGCTACTGGGGATTTCAGGTCACTGTCAGAGGTTGATCTTAATCTTATTGCTATGACTTATACACTGGAGGCTCAGATACATGGCACTGAGCGCCTCAGGGACTGTCCTCCGCCGGTGCATACTCTCAATGTCAGGAGGTTGCCGGAGAAGGAATTGCCCGGCTGGGAAAATAATGTGCCTAATTTGGAAGAGTGGGAAGCGCTGGAAAACAAAGCGGAGGATAAGGGGAACTCTGGTTCGAGGATTCTTCCGTTGAAAGATATTAACTTGAATGTTATCGTTGATGATTCTGAGAGCCCTTCTGTTCATTCTGACAATCAGGAGAGTGGTGAGGGCATTCAGGGGAGACATAGGAGATATTTTCCGAAGAAGAAGAAAGAGATAAAGATTGAAGGCAAGATGGTTTCTGAAGGAATTGATGCGTCCCAAGGACAAGTTGATGATAATGCTGGTGACTGGATGCCTGCTGTTAGTCGGAGTACACATAGAAGGTTTTTGAGAAGAAAAGCTAGACGTGAGTCTTATGAGGCATCACCTGATAATGATCCTCAGCAAGATGCTGAGGAAAACACAAGTGGTGACCGACTTGTGGATGTTGGAAGTGTTGATACATCAAATGTGAACGATGATAGTAGTGAGCAGAGCTGGATGCTGAGATCCTTGTCTGAGTCTAGTGTAGCTTGTATAACAAGTGATTTTGCAATGCAAAATGTTATTCTGCAGATGGGTTTACGGTTGTTGGCACCTGGAGGAATGCAGATCCTCCAGCTGCAGAGGTGGATTTTGAAATGCCATGCTTGTAATACTGAGACAACTGAAATTCAGAGAATATTTTGTCCAAAGTGTGGAAATGGAGGTACCTTGTGCAAGGTAGCAGTTACAGTGGGTGAGAATGGGATTATTCTTGCGACACGTAAGCCTTGGATCACCAAGCGTGGCACAAAAGTTTCACTTCCTTTACCACAAGGTGGAAGAAATGGCATTGCCAAAAACCCTGTTTTACGTGAGGATCAGCTTCCACAAAAGTACCTCCATCCAAAGACAAAGAAGAAAGCAAGTAAGCCGGGAGATGACGACCTATTCACTTCCAATGACTTCATCTTCATCCACCATTCGGATAAAAAGGCTCCTCTGCAGCCTCCAGTGAGGAGGGCATTAGCTGCTTTCAGCCGGAGGAGGAATCCCAACGACAATCATTATTCACATTCCAAGCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

NOB1_Zn_bind PIN_6

Protein Analysis

606

Amino Acids

66.89

Weight (kDa)

8.17

Isoelectric Point (pI)

59.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PIN_6	PF17146	136 - 223	3.7e-23	PIN domain of ribonuclease
Zn_ribbon_NOB1	PF08772	455 - 525	1.4e-18	Nin one binding (NOB1) Zn-ribbon like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001896)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G41190
fragaria_vesca	FvH4_5g23090
malus_domestica	MD14G1101800.v1.1
prunus_persica	Prupe.5G097400_v2.0.a1
pyrus_communis	pycom06g07650 pycom14g09860
rosa_chinensis	RchiOBHm_Chr2g0099081 RchiOBHm_Chr7g0179141 RchiOBHm_Chr7g0211871 RchiOBHm_Chr7g0211921 RchiOBHm_Chr7g0211961
rosa_laevigata	RLG00000002953 RLG00000002956 RLG00000005381 RLG00000016846 RLG00000021575
rosa_multiflora	Rmu_sc0000888.1_g000019 Rmu_sc0009005.1_g000003 Rmu_sc0017524.1_g000001 Rmu_sc0018807.1_g000007 Rmu_sc0022966.1_g000001
rosa_roxburghii	Rroxscaffold_2G00143460 Rroxscaffold_3G00247290 Rroxscaffold_3G00247320 Rroxscaffold_3G00274270 Rroxscaffold_3G00274340
rosa_rugosa	Rorug02G0076500 Rorug06G0421300 Rorug07G0129500 Rorug07G0129600
rosa_samantha	Rh2AG125600 Rh2BG128900 Rh2CG129900 Rh2DG130300 Rh7AG020500 Rh7AG262400 Rh7BG020600 Rh7BG255900 Rh7CG021700 Rh7CG278400 Rh7DG021100 Rh7DG268900 Rh7DG269200
rosa_wichuraiana	Rw7G001720 Rw7G022370 Rw7G022390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	89
AasI	GACNNNNNNGTC	1 cut(s)	467
Acc36I	ACCTGC	1 cut(s)	89
Acc65I	GGTACC	1 cut(s)	1460
AccB1I	GGYRCC	3 cut(s)	141, 1345, 1460
AccB7I	CCANNNNNTGG	3 cut(s)	556, 1448, 1571
AccBSI	CCGCTC	1 cut(s)	200
AccI	GTMKAC	1 cut(s)	411
AccII	CGCG	1 cut(s)	579
AclWI	GGATC	6 cut(s)	147, 1142, 1254, 1357, 1535, 1620
AcoI	YGGCCR	1 cut(s)	204
AcsI	RAATTY	1 cut(s)	1422
AcuI	CTGAAG	1 cut(s)	1032
AcyI	GRCGYC	2 cut(s)	129, 414
AdeI	CACNNNGTG	1 cut(s)	1571
AfaI	GTAC	4 cut(s)	183, 1084, 1462, 1631
AfeI	AGCGCT	1 cut(s)	804
AfiI	CCNNNNNNNGG	9 cut(s)	75, 76, 138, 237, 556, 1192, 1448, 1571, 1717
AflIII	ACRYGT	1 cut(s)	1514
AgeI	ACCGGT	1 cut(s)	230
AgsI	TTSAA	6 cut(s)	12, 431, 859, 874, 995, 1390
AjiI	CACGTC	1 cut(s)	1118
AjnI	CCWGG	2 cut(s)	387, 1348
AloI	GAACNNNNNNTCC	2 cut(s)	823, 855
AluBI	AGCT	8 cut(s)	75, 375, 1112, 1248, 1283, 1372, 1618, 1763
AluI	AGCT	8 cut(s)	75, 375, 1112, 1248, 1283, 1372, 1618, 1763
Alw26I	GTCTC	5 cut(s)	283, 434, 475, 943, 1406
AlwI	GGATC	6 cut(s)	147, 1142, 1254, 1357, 1535, 1620
AlwNI	CAGNNNCTG	1 cut(s)	705
Ama87I	CYCGRG	1 cut(s)	479
Aor51HI	AGCGCT	1 cut(s)	804
AoxI	GGCC	1 cut(s)	204
ApeKI	GCWGC	6 cut(s)	269, 307, 375, 1372, 1738, 1763
ApoI	RAATTY	1 cut(s)	1422
ArsI	GACNNNNNNTTYG	2 cut(s)	351, 383
AsiGI	ACCGGT	1 cut(s)	230
Asp718I	GGTACC	1 cut(s)	1460
AspLEI	GCGC	3 cut(s)	458, 696, 805
AspS9I	GGNCC	3 cut(s)	88, 313, 499
AsuC2I	CCSGG	2 cut(s)	762, 1668
AsuHPI	GGTGA	7 cut(s)	113, 944, 1067, 1128, 1193, 1502, 1522
AvaI	CYCGRG	1 cut(s)	479
AvaII	GGWCC	3 cut(s)	88, 313, 499
AxyI	CCTNAGG	1 cut(s)	698
BaeGI	GKGCMC	1 cut(s)	172
BaeI	ACNNNNGTAYC	4 cut(s)	204, 237, 1613, 1646
BanI	GGYRCC	3 cut(s)	141, 1345, 1460
BanII	GRGCYC	2 cut(s)	564, 902
BarI	GAAGNNNNNNTAC	2 cut(s)	1195, 1227
BbvCI	CCTCAGC	2 cut(s)	1152, 1164
BbvI	GCAGC	6 cut(s)	281, 319, 362, 1359, 1750, 1750
BccI	CCATC	6 cut(s)	10, 131, 217, 997, 1321, 1644
BceAI	ACGGC	2 cut(s)	383, 389
BcgI	CGANNNNNNTGC	4 cut(s)	382, 401, 416, 435
BciT130I	CCWGG	2 cut(s)	389, 1350
BcnI	CCSGG	2 cut(s)	762, 1668
BcoDI	GTCTC	5 cut(s)	283, 434, 475, 943, 1406
BfaI	CTAG	2 cut(s)	1113, 1275
BfmI	CTRYAG	4 cut(s)	123, 1322, 1373, 1736
BfoI	RGCGCY	2 cut(s)	697, 806
BfuAI	ACCTGC	1 cut(s)	89
Bme1390I	CCNGG	4 cut(s)	389, 762, 1350, 1668
Bme18I	GGWCC	3 cut(s)	88, 313, 499
BmeT110I	CYCGRG	1 cut(s)	479
BmgBI	CACGTC	1 cut(s)	1118
BmgT120I	GGNCC	3 cut(s)	88, 313, 499
BmiI	GGNNCC	7 cut(s)	89, 143, 315, 561, 1347, 1462, 1731
BmrFI	CCNGG	4 cut(s)	389, 762, 1350, 1668
BmrI	ACTGGG	2 cut(s)	269, 618
BmsI	GCATC	6 cut(s)	231, 1012, 1053, 1142, 1150, 1242
BmuI	ACTGGG	2 cut(s)	269, 618
BoxI	GACNNNNGTC	1 cut(s)	1120
BpmI	CTGGAG	5 cut(s)	265, 689, 1352, 1371, 1728
Bpu10I	CCTNAGC	2 cut(s)	1152, 1164
BpuEI	CTTGAG	1 cut(s)	177
BpuMI	CCSGG	2 cut(s)	762, 1668
BsaAI	YACGTR	2 cut(s)	1517, 1607
BsaBI	GATNNNNATC	2 cut(s)	642, 1146
BsaHI	GRCGYC	2 cut(s)	129, 414
BsaI	GGTCTC	1 cut(s)	434
BsaJI	CCNNGG	6 cut(s)	387, 388, 480, 555, 1030, 1523
BsaWI	WCCGGW	1 cut(s)	230
BsaXI	ACNNNNNCTCC	2 cut(s)	320, 350
Bsc4I	CCNNNNNNNGG	9 cut(s)	75, 76, 138, 237, 556, 1192, 1448, 1571, 1717
Bse118I	RCCGGY	3 cut(s)	131, 230, 715
Bse1I	ACTGG	7 cut(s)	220, 275, 282, 613, 672, 1064, 1745
Bse21I	CCTNAGG	1 cut(s)	698
Bse3DI	GCAATG	2 cut(s)	1311, 1584
Bse8I	GATNNNNATC	2 cut(s)	642, 1146
BseBI	CCWGG	2 cut(s)	389, 1350
BseDI	CCNNGG	6 cut(s)	387, 388, 480, 555, 1030, 1523
BseGI	GGATG	6 cut(s)	246, 1068, 1201, 1257, 1636, 1707
BseJI	GATNNNNATC	2 cut(s)	642, 1146
BseLI	CCNNNNNNNGG	9 cut(s)	75, 76, 138, 237, 556, 1192, 1448, 1571, 1717
BseMI	GCAATG	2 cut(s)	1311, 1584
BseNI	ACTGG	7 cut(s)	220, 275, 282, 613, 672, 1064, 1745
BseRI	GAGGAG	6 cut(s)	325, 328, 331, 1722, 1765, 1792
BseSI	GKGCMC	1 cut(s)	172
BseXI	GCAGC	6 cut(s)	281, 319, 362, 1359, 1750, 1750
BseYI	CCCAGC	2 cut(s)	75, 765
Bsh1236I	CGCG	1 cut(s)	579
BshFI	GGCC	1 cut(s)	206
BshNI	GGYRCC	3 cut(s)	141, 1345, 1460
BshTI	ACCGGT	1 cut(s)	230
BsiHKCI	CYCGRG	1 cut(s)	479
BsiSI	CCGG	8 cut(s)	132, 231, 311, 716, 746, 762, 1667, 1774
BslFI	GGGAC	3 cut(s)	461, 716, 1012
BslI	CCNNNNNNNGG	9 cut(s)	75, 76, 138, 237, 556, 1192, 1448, 1571, 1717
BsmAI	GTCTC	5 cut(s)	283, 434, 475, 943, 1406
BsmBI	CGTCTC	1 cut(s)	475
BsmFI	GGGAC	3 cut(s)	461, 716, 1012
BsmI	GAATGC	2 cut(s)	939, 1362
BsnI	GGCC	1 cut(s)	206
Bso31I	GGTCTC	1 cut(s)	434
BsoBI	CYCGRG	1 cut(s)	479
Bsp1286I	GDGCHC	3 cut(s)	172, 564, 902
Bsp143I	GATC	7 cut(s)	152, 637, 1147, 1259, 1362, 1527, 1612
Bsp19I	CCATGG	1 cut(s)	555
BspANI	GGCC	1 cut(s)	206
BspFNI	CGCG	1 cut(s)	579
BspHI	TCATGA	1 cut(s)	55
BspLI	GGNNCC	7 cut(s)	89, 143, 315, 561, 1347, 1462, 1731
BspMAI	CTGCAG	3 cut(s)	1326, 1377, 1740
BspMI	ACCTGC	1 cut(s)	89
BspPI	GGATC	6 cut(s)	147, 1142, 1254, 1357, 1535, 1620
BspT107I	GGYRCC	3 cut(s)	141, 1345, 1460
BspTNI	GGTCTC	1 cut(s)	434
BsrBI	CCGCTC	1 cut(s)	200
BsrDI	GCAATG	2 cut(s)	1311, 1584
BsrFI	RCCGGY	3 cut(s)	131, 230, 715
BsrI	ACTGG	7 cut(s)	220, 275, 282, 613, 672, 1064, 1745
BssAI	RCCGGY	3 cut(s)	131, 230, 715
BssECI	CCNNGG	6 cut(s)	387, 388, 480, 555, 1030, 1523
BssMI	GATC	7 cut(s)	152, 637, 1147, 1259, 1362, 1527, 1612
BssNI	GRCGYC	2 cut(s)	129, 414
BssT1I	CCWWGG	3 cut(s)	555, 1030, 1523
Bst2UI	CCWGG	2 cut(s)	389, 1350
Bst4CI	ACNGT	4 cut(s)	627, 707, 1338, 1486
Bst6I	CTCTTC	1 cut(s)	786
BstACI	GRCGYC	2 cut(s)	129, 414
BstAPI	GCANNNNNTGC	1 cut(s)	1763
BstBAI	YACGTR	2 cut(s)	1517, 1607
BstC8I	GCNNGC	3 cut(s)	133, 146, 1068
BstDSI	CCRYGG	1 cut(s)	555
BstEII	GGTNACC	1 cut(s)	1181
BstF5I	GGATG	6 cut(s)	246, 1068, 1201, 1257, 1636, 1707
BstFNI	CGCG	1 cut(s)	579
BstH2I	RGCGCY	2 cut(s)	697, 806
BstHHI	GCGC	3 cut(s)	458, 696, 805
BstKTI	GATC	7 cut(s)	155, 640, 1150, 1262, 1365, 1530, 1615
BstMAI	GTCTC	5 cut(s)	283, 434, 475, 943, 1406
BstMBI	GATC	7 cut(s)	152, 637, 1147, 1259, 1362, 1527, 1612
BstMWI	GCNNNNNNNGC	4 cut(s)	141, 455, 693, 1763
BstNI	CCWGG	2 cut(s)	389, 1350
BstPAI	GACNNNNGTC	1 cut(s)	1120
BstPI	GGTNACC	1 cut(s)	1181
BstSCI	CCNGG	4 cut(s)	387, 760, 1348, 1666
BstSFI	CTRYAG	4 cut(s)	123, 1322, 1373, 1736
BstSLI	GKGCMC	1 cut(s)	172
BstUI	CGCG	1 cut(s)	579
BstV1I	GCAGC	6 cut(s)	281, 319, 362, 1359, 1750, 1750
BstX2I	RGATCY	2 cut(s)	1259, 1362
BstXI	CCANNNNNNTGG	1 cut(s)	364
BstYI	RGATCY	2 cut(s)	1259, 1362
Bsu36I	CCTNAGG	1 cut(s)	698
BsuRI	GGCC	1 cut(s)	206
BtgI	CCRYGG	1 cut(s)	555
BtgZI	GCGATG	1 cut(s)	150
BtrI	CACGTC	1 cut(s)	1118
BtsCI	GGATG	6 cut(s)	246, 1068, 1201, 1257, 1636, 1707
BtsI	GCAGTG	1 cut(s)	451
BtsIMutI	CAGTG	6 cut(s)	451, 623, 665, 687, 1491, 1752
BveI	ACCTGC	1 cut(s)	89
Cac8I	GCNNGC	3 cut(s)	133, 146, 1068
CaiI	CAGNNNCTG	1 cut(s)	705
CciI	TCATGA	1 cut(s)	55
CfoI	GCGC	3 cut(s)	458, 696, 805
Cfr10I	RCCGGY	3 cut(s)	131, 230, 715
Cfr13I	GGNCC	3 cut(s)	88, 313, 499
CseI	GACGC	4 cut(s)	29, 137, 422, 1014
Csp6I	GTAC	4 cut(s)	182, 1083, 1461, 1630
CspAI	ACCGGT	1 cut(s)	230
CviAII	CATG	4 cut(s)	56, 556, 683, 1397
CviQI	GTAC	4 cut(s)	182, 1083, 1461, 1630
DpnI	GATC	7 cut(s)	154, 639, 1149, 1261, 1364, 1529, 1614
DpnII	GATC	7 cut(s)	152, 637, 1147, 1259, 1362, 1527, 1612
DraIII	CACNNNGTG	1 cut(s)	1571
DrdI	GACNNNNNNGTC	1 cut(s)	467
DseDI	GACNNNNNNGTC	1 cut(s)	467
EaeI	YGGCCR	1 cut(s)	204
Eam1104I	CTCTTC	1 cut(s)	786
EarI	CTCTTC	1 cut(s)	786
EciI	GGCGGA	1 cut(s)	702
Eco130I	CCWWGG	3 cut(s)	555, 1030, 1523
Eco24I	GRGCYC	2 cut(s)	564, 902
Eco31I	GGTCTC	1 cut(s)	434
Eco47I	GGWCC	3 cut(s)	88, 313, 499
Eco47III	AGCGCT	1 cut(s)	804
Eco57I	CTGAAG	1 cut(s)	1032
Eco81I	CCTNAGG	1 cut(s)	698
Eco88I	CYCGRG	1 cut(s)	479
Eco91I	GGTNACC	1 cut(s)	1181
EcoO65I	GGTNACC	1 cut(s)	1181
EcoRII	CCWGG	2 cut(s)	387, 1348
EcoT14I	CCWWGG	3 cut(s)	555, 1030, 1523
EcoT38I	GRGCYC	2 cut(s)	564, 902
ErhI	CCWWGG	3 cut(s)	555, 1030, 1523
Esp3I	CGTCTC	1 cut(s)	475
FaeI	CATG	4 cut(s)	59, 559, 686, 1400
FalI	AAGNNNNNCTT	2 cut(s)	1539, 1571
FaqI	GGGAC	3 cut(s)	461, 716, 1012
FatI	CATG	4 cut(s)	55, 555, 682, 1396
FauI	CCCGC	2 cut(s)	524, 584
FblI	GTMKAC	1 cut(s)	411
FokI	GGATG	6 cut(s)	253, 1075, 1208, 1264, 1623, 1694
FriOI	GRGCYC	2 cut(s)	564, 902
FspBI	CTAG	2 cut(s)	1113, 1275
GlaI	GCGC	3 cut(s)	457, 695, 804
GsaI	CCCAGC	2 cut(s)	79, 769
GsuI	CTGGAG	5 cut(s)	265, 689, 1352, 1371, 1728
HaeII	RGCGCY	2 cut(s)	697, 806
HaeIII	GGCC	1 cut(s)	206
HapII	CCGG	8 cut(s)	132, 231, 311, 716, 746, 762, 1667, 1774
HgaI	GACGC	4 cut(s)	29, 137, 422, 1014
HhaI	GCGC	3 cut(s)	458, 696, 805
Hin1I	GRCGYC	2 cut(s)	129, 414
Hin1II	CATG	4 cut(s)	59, 559, 686, 1400
Hin6I	GCGC	3 cut(s)	456, 694, 803
HinP1I	GCGC	3 cut(s)	456, 694, 803
HincII	GTYRAC	1 cut(s)	412
HindII	GTYRAC	1 cut(s)	412
HinfI	GANTC	8 cut(s)	59, 119, 572, 847, 890, 1121, 1271, 1783
HpaII	CCGG	8 cut(s)	132, 231, 311, 716, 746, 762, 1667, 1774
HphI	GGTGA	7 cut(s)	113, 944, 1067, 1128, 1193, 1502, 1522
Hpy166II	GTNNAC	5 cut(s)	412, 550, 1085, 1225, 1334
Hpy188III	TCNNGA	4 cut(s)	56, 298, 736, 923
Hpy8I	GTNNAC	5 cut(s)	412, 550, 1085, 1225, 1334
Hpy99I	CGWCG	6 cut(s)	45, 48, 404, 410, 413, 416
HpyAV	CCTTC	7 cut(s)	545, 550, 745, 912, 989, 1007, 1086
HpyCH4III	ACNGT	4 cut(s)	627, 707, 1338, 1486
HpyCH4IV	ACGT	3 cut(s)	1117, 1516, 1606
HpyF10VI	GCNNNNNNNGC	4 cut(s)	141, 455, 693, 1763
HpySE526I	ACGT	3 cut(s)	1117, 1516, 1606
Hsp92I	GRCGYC	2 cut(s)	129, 414
Hsp92II	CATG	4 cut(s)	59, 559, 686, 1400
HspAI	GCGC	3 cut(s)	456, 694, 803
KpnI	GGTACC	1 cut(s)	1464
KroI	GCCGGC	1 cut(s)	131
KroNI	GCCGGC	1 cut(s)	133
Kzo9I	GATC	7 cut(s)	152, 637, 1147, 1259, 1362, 1527, 1612
LmnI	GCTCC	5 cut(s)	9, 197, 288, 559, 1735
Lsp1109I	GCAGC	6 cut(s)	281, 319, 362, 1359, 1750, 1750
LweI	GCATC	6 cut(s)	231, 1012, 1053, 1142, 1150, 1242
MaeI	CTAG	2 cut(s)	1113, 1275
MaeII	ACGT	3 cut(s)	1117, 1516, 1606
MaeIII	GTNAC	5 cut(s)	503, 621, 1055, 1181, 1480
MalI	GATC	7 cut(s)	154, 639, 1149, 1261, 1364, 1529, 1614
MbiI	CCGCTC	1 cut(s)	200
MboI	GATC	7 cut(s)	152, 637, 1147, 1259, 1362, 1527, 1612
MflI	RGATCY	2 cut(s)	1259, 1362
MhlI	GDGCHC	3 cut(s)	172, 564, 902
MluCI	AATT	4 cut(s)	755, 784, 1017, 1422
MlyI	GAGTC	3 cut(s)	53, 1130, 1280
MmeI	TCCRAC	3 cut(s)	266, 1058, 1180
MreI	CGCCGGCG	1 cut(s)	131
MroNI	GCCGGC	1 cut(s)	131
MseI	TTAA	2 cut(s)	642, 867
MspA1I	CMGCKG	1 cut(s)	1372
MspI	CCGG	8 cut(s)	132, 231, 311, 716, 746, 762, 1667, 1774
MspR9I	CCNGG	4 cut(s)	389, 762, 1350, 1668
Mva1269I	GAATGC	2 cut(s)	939, 1362
MvaI	CCWGG	2 cut(s)	389, 1350
MvnI	CGCG	1 cut(s)	579
MwoI	GCNNNNNNNGC	4 cut(s)	141, 455, 693, 1763
NaeI	GCCGGC	1 cut(s)	133
NciI	CCSGG	2 cut(s)	762, 1668
NcoI	CCATGG	1 cut(s)	555
NdeII	GATC	7 cut(s)	152, 637, 1147, 1259, 1362, 1527, 1612
NgoMIV	GCCGGC	1 cut(s)	131
NlaIII	CATG	4 cut(s)	59, 559, 686, 1400
NlaIV	GGNNCC	7 cut(s)	89, 143, 315, 561, 1347, 1462, 1731
NmuCI	GTSAC	4 cut(s)	503, 621, 1055, 1181
PagI	TCATGA	1 cut(s)	55
PaqCI	CACCTGC	1 cut(s)	89
PasI	CCCWGGG	1 cut(s)	388
PcsI	WCGNNNNNNNCGW	1 cut(s)	408
PctI	GAATGC	2 cut(s)	939, 1362
PdiI	GCCGGC	1 cut(s)	133
PfeI	GAWTC	5 cut(s)	119, 572, 847, 890, 1783
PflMI	CCANNNNNTGG	3 cut(s)	556, 1448, 1571
PinAI	ACCGGT	1 cut(s)	230
PleI	GAGTC	3 cut(s)	53, 1129, 1279
PpsI	GAGTC	3 cut(s)	53, 1129, 1279
Ppu21I	YACGTR	2 cut(s)	1517, 1607
PshAI	GACNNNNGTC	1 cut(s)	1120
Psp6I	CCWGG	2 cut(s)	387, 1348
PspEI	GGTNACC	1 cut(s)	1181
PspFI	CCCAGC	2 cut(s)	75, 765
PspGI	CCWGG	2 cut(s)	387, 1348
PspN4I	GGNNCC	7 cut(s)	89, 143, 315, 561, 1347, 1462, 1731
PspPI	GGNCC	3 cut(s)	88, 313, 499
PstI	CTGCAG	3 cut(s)	1326, 1377, 1740
PstNI	CAGNNNCTG	1 cut(s)	705
PsuI	RGATCY	2 cut(s)	1259, 1362
PvuII	CAGCTG	1 cut(s)	1372
RsaI	GTAC	4 cut(s)	183, 1084, 1462, 1631
RsaNI	GTAC	4 cut(s)	182, 1083, 1461, 1630
SalI	GTCGAC	1 cut(s)	410
SaqAI	TTAA	2 cut(s)	642, 867
Sau3AI	GATC	7 cut(s)	152, 637, 1147, 1259, 1362, 1527, 1612
Sau96I	GGNCC	3 cut(s)	88, 313, 499
SchI	GAGTC	3 cut(s)	53, 1130, 1280
ScrFI	CCNGG	4 cut(s)	389, 762, 1350, 1668
SduI	GDGCHC	3 cut(s)	172, 564, 902
SfaNI	GCATC	6 cut(s)	231, 1012, 1053, 1142, 1150, 1242
SfcI	CTRYAG	4 cut(s)	123, 1322, 1373, 1736
SgrAI	CRCCGGYG	2 cut(s)	131, 715
SgrDI	CGTCGACG	1 cut(s)	410
SinI	GGWCC	3 cut(s)	88, 313, 499
SmlI	CTYRAG	1 cut(s)	192
SmoI	CTYRAG	1 cut(s)	192
Sse9I	AATT	4 cut(s)	755, 784, 1017, 1422
SspI	AATATT	1 cut(s)	1434
SspMI	CTAG	2 cut(s)	1113, 1275
StyD4I	CCNGG	4 cut(s)	387, 760, 1348, 1666
StyI	CCWWGG	3 cut(s)	555, 1030, 1523
TaaI	ACNGT	4 cut(s)	627, 707, 1338, 1486
TaiI	ACGT	3 cut(s)	1120, 1519, 1609
TaqI	TCGA	4 cut(s)	151, 369, 411, 842
TaqII	GACCGA	1 cut(s)	1200
TasI	AATT	4 cut(s)	755, 784, 1017, 1422
TatI	WGTACW	1 cut(s)	1082
TauI	GCSGC	5 cut(s)	23, 26, 83, 438, 533
TfiI	GAWTC	5 cut(s)	119, 572, 847, 890, 1783
Tru1I	TTAA	2 cut(s)	642, 867
Tru9I	TTAA	2 cut(s)	642, 867
TscAI	CASTG	6 cut(s)	458, 630, 672, 694, 1491, 1752
TseFI	GTSAC	4 cut(s)	503, 621, 1055, 1181
TseI	GCWGC	6 cut(s)	269, 307, 375, 1372, 1738, 1763
Tsp45I	GTSAC	4 cut(s)	503, 621, 1055, 1181
TspDTI	ATGAA	3 cut(s)	899, 1690, 1696
TspGWI	ACGGA	3 cut(s)	463, 491, 843
TspRI	CASTG	6 cut(s)	458, 630, 672, 694, 1491, 1752
Van91I	CCANNNNNTGG	3 cut(s)	556, 1448, 1571
VpaK11BI	GGWCC	3 cut(s)	88, 313, 499
XapI	RAATTY	1 cut(s)	1422
XcmI	CCANNNNNNNNNTGG	2 cut(s)	282, 361
XmiI	GTMKAC	1 cut(s)	411
XspI	CTAG	2 cut(s)	1113, 1275

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.