Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0001896

Physical Location & Seq

Genomic Coordinates Reverse (-)

28720580 .. 28723585

Gene Structure 3006 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG268900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1935 bp

ATGGACGCCACCGTCACCCCAGCCCCAATCCCCGACCCGAACCCGAACGCCGCCCCAGCCGTCTCCTGTTGGAGCAACATCGTGAAGAAGCAGCCGGACCCAAAGCCCCAAAACTCCTCCGACTCCTCCTCAATCGCCGCCGGCAAAGTATTCGTCGAAAGCTGCAAGTCCTCCAAGGGCATAGCCGTCGCCGTCGTCGACGCCAATGCTATCATTCAAGGCGGCGAGACCCTCGCCCACTGCGCCGACAAGTTCGTCTCCGTCCCAGAGGTCATGGACGAGGTCCGGGACCCTGTTTCCCGCCACCGCCTCGCCGTCGTTCCCTTCCAAGTCCAGACCATGGAACCCTCCCCTGAATCCCTCAATAAAGTTGTTAAGTTTGCGAGGGCTACTGGGGATTTACAGACACTGTCAGATGTGGATGTTAAGCTCATTGCTATGACTTATACATTGGAGGCTCAGATACATGGCACTGAGCACCTCAGGGACTGTCCTCCGCCGGTGCATACCGTCAATGTGAGGAGGTTGCCAGAGAAGGACCTGCCTGGGTGGGGAAATAATGTGCCAAATTTGGAAGAGTGGGAAGCGCTGGAGAACGAAGCGGAGGATAAGTTGAACCCCAGTTCGAGGATTCTTCCGCTGAAAGATATAAACTTGAATGTTATTGAGGATTCTGAGAGCCGTTCTGTTGATGGTTCTGCGGTGGAAGTTACGAGTGATGTTTGTTCTGAGAATCAGGAGGGTGGTGAGGGCATTCAGGGGAGACATAGGAGATATTTTCCAAAGAAGAAAGAGATAAAGATTGAAGGGAAGATGGTTTCTGATGGAATTGATGCATCCCAAGGACAAGCTGATGATAATGCCGGTGATTGGATGCCTGCCGTCAGTCGGAGTACACATAGAAGGTTTTTGAGAAGAAAAGCTAGACGTGAGTCTTATGAGGCATCGGCTGATAATGATTCTCAGCAAGATGCTGAGGAAAACACCAGTGGTGACGTACTTGTAGATGCTAGGAGCCAGGATCAAACATCGCCTTCTAAATTTAAAGAGGCATGTTGCAGACCTGTGGAGAGTGAGATGACAGAAGAGAAGAATTGTGATGAAGATCTTTCCTCAATCCTTGAGCAAACAAGGCGTGATGAAGATTCACTAAGGGCTCTTCAAAAAGGGAAGGAGCAGCATGGGGTTGAGGATAATGATTTCAAAGCAGGGGAAAACACTTCTGATAACGGTGTGAATTTTGCTGTTGAGGGAGATGAGGTTGAAGTGATAAATGAAGGTCTGGATCACTTGGAGATCTCAAGTCATAATGATGGTAGTCTTGATACCTCAAATGTTAACGATGATAGCAGTGAGCAGAGCTGGATGCTGCGATCCTTGTCTGAGTCTAGTGTAGCATGTATAACAAGTGATTTTGCAATGCAAAATGTTATTCTGCAGATGGGTTTACGGTTGTTGGCACCAGGAGGAATGCAGATCCGCCAGCTGCACAGGTGGATTTTGAAATGCCATGCTTGTAACACTGTGACTGCTGAAATTGGGAGAATATTTTGTCCAAAGTGTGGAAATGGTGGTACCTTGCGCAAGGTAGCAGTTACAGTGGGTGAGAATGGGATTATTCTTGCGGCACGTAAGCCTCGGATCATGTTGCGTGGCACAAGATTTTCACTTCCTTTACCTCAAGGTGGAAGAAATGCCATTACTAAGAACCCCGTTTTACGTGAGGATCAGCTCCCACAAAAGTACCTTCATCCAAAGACAAAAAAGAAAGCAAATAAGCCGGGAGATGACGACCTCTTCACTTCCAATGACTTCATCTTCCGCCACCATTCTGATAAAAAGGCTCCTTTGCAGCCTCCTGTAAGGAAGGCATTAGCTGCTTTCAGTGGAAGGAGGAATCCCAACGACAATCATTATTCACATTCCAAGCATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

NOB1_Zn_bind PIN_6

Protein Analysis

644

Amino Acids

70.95

Weight (kDa)

5.56

Isoelectric Point (pI)

57.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PIN_6	PF17146	65 - 151	5.2e-26	PIN domain of ribonuclease
Zn_ribbon_NOB1	PF08772	493 - 563	1.4e-21	Nin one binding (NOB1) Zn-ribbon like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001896)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G41190
fragaria_vesca	FvH4_5g23090
malus_domestica	MD14G1101800.v1.1
prunus_persica	Prupe.5G097400_v2.0.a1
pyrus_communis	pycom06g07650 pycom14g09860
rosa_chinensis	RchiOBHm_Chr2g0099081 RchiOBHm_Chr7g0179141 RchiOBHm_Chr7g0211871 RchiOBHm_Chr7g0211921 RchiOBHm_Chr7g0211961
rosa_laevigata	RLG00000002953 RLG00000002956 RLG00000005381 RLG00000016846 RLG00000021575
rosa_multiflora	Rmu_sc0000888.1_g000019 Rmu_sc0009005.1_g000003 Rmu_sc0017524.1_g000001 Rmu_sc0018807.1_g000007 Rmu_sc0022966.1_g000001
rosa_roxburghii	Rroxscaffold_2G00143460 Rroxscaffold_3G00247290 Rroxscaffold_3G00247320 Rroxscaffold_3G00274270 Rroxscaffold_3G00274340
rosa_rugosa	Rorug02G0076500 Rorug06G0421300 Rorug07G0129500 Rorug07G0129600
rosa_samantha	Rh2AG125600 Rh2BG128900 Rh2CG129900 Rh2DG130300 Rh7AG020500 Rh7AG262400 Rh7BG020600 Rh7BG255900 Rh7CG021700 Rh7CG278400 Rh7DG021100 Rh7DG268900 Rh7DG269200
rosa_wichuraiana	Rw7G001720 Rw7G022370 Rw7G022390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	11, 254
Acc16I	TGCGCA	1 cut(s)	1583
Acc36I	ACCTGC	1 cut(s)	549
Acc65I	GGTACC	1 cut(s)	1574
AccB1I	GGYRCC	2 cut(s)	1459, 1574
AccB7I	CCANNNNNTGG	2 cut(s)	340, 1562
AccI	GTMKAC	1 cut(s)	198
AclWI	GGATC	6 cut(s)	1029, 1293, 1368, 1471, 1649, 1734
AcsI	RAATTY	3 cut(s)	568, 1040, 1237
AcyI	GRCGYC	2 cut(s)	6, 201
AfaI	GTAC	4 cut(s)	895, 999, 1576, 1745
AfeI	AGCGCT	1 cut(s)	588
AfiI	CCNNNNNNNGG	7 cut(s)	340, 551, 627, 870, 888, 1562, 1685
AgsI	TTSAA	8 cut(s)	218, 616, 658, 806, 1163, 1204, 1265, 1504
AjiI	CACGTC	1 cut(s)	929
AjnI	CCWGG	3 cut(s)	544, 1017, 1462
AluBI	AGCT	8 cut(s)	162, 430, 851, 923, 1362, 1486, 1732, 1877
AluI	AGCT	8 cut(s)	162, 430, 851, 923, 1362, 1486, 1732, 1877
Alw21I	GWGCWC	1 cut(s)	480
Alw26I	GTCTC	4 cut(s)	67, 221, 262, 757
AlwI	GGATC	6 cut(s)	1029, 1293, 1368, 1471, 1649, 1734
AlwNI	CAGNNNCTG	2 cut(s)	409, 489
Aor51HI	AGCGCT	1 cut(s)	588
ApeKI	GCWGC	7 cut(s)	91, 162, 1177, 1369, 1486, 1852, 1877
ApoI	RAATTY	3 cut(s)	568, 1040, 1237
ArsI	GACNNNNNNTTYG	2 cut(s)	138, 170
Asp718I	GGTACC	1 cut(s)	1574
AspLEI	GCGC	3 cut(s)	245, 589, 1584
AspS9I	GGNCC	4 cut(s)	97, 283, 289, 538
AsuC2I	CCSGG	2 cut(s)	287, 1782
AsuHPI	GGTGA	5 cut(s)	7, 758, 878, 1004, 1616
AvaII	GGWCC	4 cut(s)	97, 283, 289, 538
AxyI	CCTNAGG	1 cut(s)	482
BaeI	ACNNNNGTAYC	2 cut(s)	1727, 1760
BanI	GGYRCC	2 cut(s)	1459, 1574
BanII	GRGCYC	1 cut(s)	1159
Bbv12I	GWGCWC	1 cut(s)	480
BbvCI	CCTCAGC	1 cut(s)	975
BbvI	GCAGC	7 cut(s)	103, 149, 1189, 1356, 1473, 1864, 1864
BccI	CCATC	5 cut(s)	686, 808, 818, 1307, 1435
BceAI	ACGGC	6 cut(s)	44, 170, 176, 299, 666, 866
BcgI	CGANNNNNNTGC	6 cut(s)	133, 167, 169, 188, 203, 222
BciT130I	CCWGG	3 cut(s)	546, 1019, 1464
BcnI	CCSGG	2 cut(s)	287, 1782
BcoDI	GTCTC	4 cut(s)	67, 221, 262, 757
BfaI	CTAG	3 cut(s)	924, 1011, 1389
BfmI	CTRYAG	1 cut(s)	1436
BfoI	RGCGCY	1 cut(s)	590
BfuAI	ACCTGC	1 cut(s)	549
BglII	AGATCT	2 cut(s)	1105, 1296
Bme1390I	CCNGG	5 cut(s)	287, 546, 1019, 1464, 1782
Bme18I	GGWCC	4 cut(s)	97, 283, 289, 538
BmgBI	CACGTC	1 cut(s)	929
BmgT120I	GGNCC	4 cut(s)	97, 283, 289, 538
BmiI	GGNNCC	8 cut(s)	99, 290, 291, 345, 1016, 1461, 1576, 1845
BmrFI	CCNGG	5 cut(s)	287, 546, 1019, 1464, 1782
BmrI	ACTGGG	2 cut(s)	402, 615
BmsI	GCATC	7 cut(s)	823, 845, 864, 953, 961, 997, 1356
BmuI	ACTGGG	2 cut(s)	402, 615
BoxI	GACNNNNGTC	1 cut(s)	931
BpmI	CTGGAG	1 cut(s)	611
Bpu10I	CCTNAGC	1 cut(s)	975
BpuEI	CTTGAG	3 cut(s)	1142, 1285, 1665
BpuMI	CCSGG	2 cut(s)	287, 1782
BsaAI	YACGTR	2 cut(s)	1631, 1721
BsaBI	GATNNNNATC	1 cut(s)	1104
BsaHI	GRCGYC	2 cut(s)	6, 201
BsaI	GGTCTC	1 cut(s)	221
BsaJI	CCNNGG	5 cut(s)	174, 339, 545, 841, 1637
BsaXI	ACNNNNNCTCC	4 cut(s)	596, 626, 1245, 1275
Bsc4I	CCNNNNNNNGG	7 cut(s)	340, 551, 627, 870, 888, 1562, 1685
Bse118I	RCCGGY	3 cut(s)	140, 499, 863
Bse1I	ACTGG	3 cut(s)	397, 621, 987
Bse21I	CCTNAGG	1 cut(s)	482
Bse3DI	GCAATG	2 cut(s)	432, 1425
Bse8I	GATNNNNATC	1 cut(s)	1104
BseBI	CCWGG	3 cut(s)	546, 1019, 1464
BseDI	CCNNGG	5 cut(s)	174, 339, 545, 841, 1637
BseGI	GGATG	5 cut(s)	427, 836, 879, 1371, 1750
BseJI	GATNNNNATC	1 cut(s)	1104
BseLI	CCNNNNNNNGG	7 cut(s)	340, 551, 627, 870, 888, 1562, 1685
BseMI	GCAATG	2 cut(s)	432, 1425
BseMII	CTCAG	8 cut(s)	465, 473, 496, 666, 720, 966, 977, 1374
BseNI	ACTGG	3 cut(s)	397, 621, 987
BseRI	GAGGAG	4 cut(s)	106, 115, 118, 535
BseXI	GCAGC	7 cut(s)	103, 149, 1189, 1356, 1473, 1864, 1864
BseYI	CCCAGC	2 cut(s)	19, 55
BsgI	GTGCAG	1 cut(s)	1472
BshNI	GGYRCC	2 cut(s)	1459, 1574
BsiHKAI	GWGCWC	1 cut(s)	480
BsiSI	CCGG	6 cut(s)	95, 141, 286, 500, 864, 1781
BslFI	GGGAC	3 cut(s)	248, 302, 500
BslI	CCNNNNNNNGG	7 cut(s)	340, 551, 627, 870, 888, 1562, 1685
BsmAI	GTCTC	4 cut(s)	67, 221, 262, 757
BsmBI	CGTCTC	2 cut(s)	67, 262
BsmFI	GGGAC	3 cut(s)	248, 302, 500
BsmI	GAATGC	2 cut(s)	753, 1476
Bso31I	GGTCTC	1 cut(s)	221
Bsp1286I	GDGCHC	2 cut(s)	480, 1159
Bsp143I	GATC	8 cut(s)	1021, 1105, 1285, 1296, 1373, 1476, 1641, 1726
Bsp19I	CCATGG	1 cut(s)	339
BspCNI	CTCAG	8 cut(s)	466, 472, 495, 667, 721, 967, 976, 1375
BspLI	GGNNCC	8 cut(s)	99, 290, 291, 345, 1016, 1461, 1576, 1845
BspMAI	CTGCAG	1 cut(s)	1440
BspMI	ACCTGC	1 cut(s)	549
BspPI	GGATC	6 cut(s)	1029, 1293, 1368, 1471, 1649, 1734
BspQI	GCTCTTC	1 cut(s)	1164
BspT107I	GGYRCC	2 cut(s)	1459, 1574
BspTNI	GGTCTC	1 cut(s)	221
BsrDI	GCAATG	2 cut(s)	432, 1425
BsrFI	RCCGGY	3 cut(s)	140, 499, 863
BsrI	ACTGG	3 cut(s)	397, 621, 987
BssAI	RCCGGY	3 cut(s)	140, 499, 863
BssECI	CCNNGG	5 cut(s)	174, 339, 545, 841, 1637
BssMI	GATC	8 cut(s)	1021, 1105, 1285, 1296, 1373, 1476, 1641, 1726
BssNI	GRCGYC	2 cut(s)	6, 201
BssT1I	CCWWGG	3 cut(s)	174, 339, 841
Bst2UI	CCWGG	3 cut(s)	546, 1019, 1464
Bst4CI	ACNGT	8 cut(s)	13, 411, 491, 511, 1232, 1452, 1525, 1600
Bst6I	CTCTTC	4 cut(s)	570, 1080, 1164, 1802
BstACI	GRCGYC	2 cut(s)	6, 201
BstAPI	GCANNNNNTGC	1 cut(s)	1877
BstBAI	YACGTR	2 cut(s)	1631, 1721
BstC8I	GCNNGC	3 cut(s)	142, 879, 1484
BstDSI	CCRYGG	1 cut(s)	339
BstF5I	GGATG	5 cut(s)	427, 836, 879, 1371, 1750
BstH2I	RGCGCY	1 cut(s)	590
BstHHI	GCGC	3 cut(s)	245, 589, 1584
BstKTI	GATC	8 cut(s)	1024, 1108, 1288, 1299, 1376, 1479, 1644, 1729
BstMAI	GTCTC	4 cut(s)	67, 221, 262, 757
BstMBI	GATC	8 cut(s)	1021, 1105, 1285, 1296, 1373, 1476, 1641, 1726
BstMWI	GCNNNNNNNGC	4 cut(s)	56, 242, 1132, 1877
BstNI	CCWGG	3 cut(s)	546, 1019, 1464
BstNSI	RCATGY	2 cut(s)	1056, 1401
BstPAI	GACNNNNGTC	1 cut(s)	931
BstSCI	CCNGG	5 cut(s)	285, 544, 1017, 1462, 1780
BstSFI	CTRYAG	1 cut(s)	1436
BstV1I	GCAGC	7 cut(s)	103, 149, 1189, 1356, 1473, 1864, 1864
BstX2I	RGATCY	3 cut(s)	1105, 1296, 1476
BstYI	RGATCY	3 cut(s)	1105, 1296, 1476
Bsu36I	CCTNAGG	1 cut(s)	482
BtgI	CCRYGG	1 cut(s)	339
BtgZI	GCGATG	1 cut(s)	1014
BtrI	CACGTC	1 cut(s)	929
BtsCI	GGATG	5 cut(s)	427, 836, 879, 1371, 1750
BtsI	GCAGTG	2 cut(s)	238, 1357
BtsIMutI	CAGTG	8 cut(s)	238, 407, 471, 994, 1357, 1521, 1605, 1891
BveI	ACCTGC	1 cut(s)	549
Cac8I	GCNNGC	3 cut(s)	142, 879, 1484
CaiI	CAGNNNCTG	2 cut(s)	409, 489
CfoI	GCGC	3 cut(s)	245, 589, 1584
Cfr10I	RCCGGY	3 cut(s)	140, 499, 863
Cfr13I	GGNCC	4 cut(s)	97, 283, 289, 538
CseI	GACGC	2 cut(s)	14, 209
Csp6I	GTAC	4 cut(s)	894, 998, 1575, 1744
CviAII	CATG	8 cut(s)	274, 340, 467, 1053, 1181, 1398, 1511, 1645
CviQI	GTAC	4 cut(s)	894, 998, 1575, 1744
DpnI	GATC	8 cut(s)	1023, 1107, 1287, 1298, 1375, 1478, 1643, 1728
DpnII	GATC	8 cut(s)	1021, 1105, 1285, 1296, 1373, 1476, 1641, 1726
DraI	TTTAAA	1 cut(s)	1045
DrdI	GACNNNNNNGTC	2 cut(s)	11, 254
DseDI	GACNNNNNNGTC	2 cut(s)	11, 254
Eam1104I	CTCTTC	4 cut(s)	570, 1080, 1164, 1802
EarI	CTCTTC	4 cut(s)	570, 1080, 1164, 1802
EciI	GGCGGA	3 cut(s)	486, 1469, 1811
Eco130I	CCWWGG	3 cut(s)	174, 339, 841
Eco24I	GRGCYC	1 cut(s)	1159
Eco31I	GGTCTC	1 cut(s)	221
Eco47I	GGWCC	4 cut(s)	97, 283, 289, 538
Eco47III	AGCGCT	1 cut(s)	588
Eco81I	CCTNAGG	1 cut(s)	482
EcoO109I	RGGNCCY	2 cut(s)	289, 538
EcoRII	CCWGG	3 cut(s)	544, 1017, 1462
EcoT14I	CCWWGG	3 cut(s)	174, 339, 841
EcoT22I	ATGCAT	1 cut(s)	838
EcoT38I	GRGCYC	1 cut(s)	1159
ErhI	CCWWGG	3 cut(s)	174, 339, 841
Esp3I	CGTCTC	2 cut(s)	67, 262
FaeI	CATG	8 cut(s)	277, 343, 470, 1056, 1184, 1401, 1514, 1648
FaqI	GGGAC	3 cut(s)	248, 302, 500
FatI	CATG	8 cut(s)	273, 339, 466, 1052, 1180, 1397, 1510, 1644
FauI	CCCGC	1 cut(s)	308
FblI	GTMKAC	1 cut(s)	198
FokI	GGATG	5 cut(s)	434, 823, 886, 1378, 1737
FriOI	GRGCYC	1 cut(s)	1159
FspBI	CTAG	3 cut(s)	924, 1011, 1389
FspI	TGCGCA	1 cut(s)	1583
GlaI	GCGC	3 cut(s)	244, 588, 1583
GsaI	CCCAGC	2 cut(s)	23, 59
GsuI	CTGGAG	1 cut(s)	611
HaeII	RGCGCY	1 cut(s)	590
HapII	CCGG	6 cut(s)	95, 141, 286, 500, 864, 1781
HgaI	GACGC	2 cut(s)	14, 209
HhaI	GCGC	3 cut(s)	245, 589, 1584
Hin1I	GRCGYC	2 cut(s)	6, 201
Hin1II	CATG	8 cut(s)	277, 343, 470, 1056, 1184, 1401, 1514, 1648
Hin6I	GCGC	3 cut(s)	243, 587, 1582
HinP1I	GCGC	3 cut(s)	243, 587, 1582
HincII	GTYRAC	2 cut(s)	199, 1339
HindII	GTYRAC	2 cut(s)	199, 1339
HpaI	GTTAAC	1 cut(s)	1339
HpaII	CCGG	6 cut(s)	95, 141, 286, 500, 864, 1781
HphI	GGTGA	5 cut(s)	7, 758, 878, 1004, 1616
Hpy166II	GTNNAC	4 cut(s)	199, 896, 1339, 1448
Hpy188III	TCNNGA	5 cut(s)	82, 334, 737, 1283, 1322
Hpy8I	GTNNAC	4 cut(s)	199, 896, 1339, 1448
Hpy99I	CGWCG	6 cut(s)	158, 191, 197, 200, 203, 320
HpyCH4III	ACNGT	8 cut(s)	13, 411, 491, 511, 1232, 1452, 1525, 1600
HpyCH4IV	ACGT	4 cut(s)	928, 996, 1630, 1720
HpyF10VI	GCNNNNNNNGC	4 cut(s)	56, 242, 1132, 1877
HpySE526I	ACGT	4 cut(s)	928, 996, 1630, 1720
Hsp92I	GRCGYC	2 cut(s)	6, 201
Hsp92II	CATG	8 cut(s)	277, 343, 470, 1056, 1184, 1401, 1514, 1648
HspAI	GCGC	3 cut(s)	243, 587, 1582
KflI	GGGWCCC	1 cut(s)	289
KpnI	GGTACC	1 cut(s)	1578
KroI	GCCGGC	1 cut(s)	140
KroNI	GCCGGC	1 cut(s)	142
KspAI	GTTAAC	1 cut(s)	1339
Kzo9I	GATC	8 cut(s)	1021, 1105, 1285, 1296, 1373, 1476, 1641, 1726
LguI	GCTCTTC	1 cut(s)	1164
LmnI	GCTCC	5 cut(s)	72, 1014, 1174, 1737, 1849
Lsp1109I	GCAGC	7 cut(s)	103, 149, 1189, 1356, 1473, 1864, 1864
LweI	GCATC	7 cut(s)	823, 845, 864, 953, 961, 997, 1356
MaeI	CTAG	3 cut(s)	924, 1011, 1389
MaeII	ACGT	4 cut(s)	928, 996, 1630, 1720
MaeIII	GTNAC	6 cut(s)	13, 709, 992, 1517, 1525, 1594
MalI	GATC	8 cut(s)	1023, 1107, 1287, 1298, 1375, 1478, 1643, 1728
MboI	GATC	8 cut(s)	1021, 1105, 1285, 1296, 1373, 1476, 1641, 1726
MflI	RGATCY	3 cut(s)	1105, 1296, 1476
MhlI	GDGCHC	2 cut(s)	480, 1159
MluCI	AATT	6 cut(s)	568, 828, 1040, 1093, 1237, 1536
MlyI	GAGTC	3 cut(s)	116, 941, 1394
MmeI	TCCRAC	3 cut(s)	50, 144, 869
Mph1103I	ATGCAT	1 cut(s)	838
MroNI	GCCGGC	1 cut(s)	140
MseI	TTAA	5 cut(s)	375, 426, 1044, 1338, 1933
MslI	CAYNNNNRTG	2 cut(s)	437, 1311
MspA1I	CMGCKG	2 cut(s)	640, 1486
MspI	CCGG	6 cut(s)	95, 141, 286, 500, 864, 1781
MspR9I	CCNGG	5 cut(s)	287, 546, 1019, 1464, 1782
Mva1269I	GAATGC	2 cut(s)	753, 1476
MvaI	CCWGG	3 cut(s)	546, 1019, 1464
MwoI	GCNNNNNNNGC	4 cut(s)	56, 242, 1132, 1877
NaeI	GCCGGC	1 cut(s)	142
NciI	CCSGG	2 cut(s)	287, 1782
NcoI	CCATGG	1 cut(s)	339
NdeII	GATC	8 cut(s)	1021, 1105, 1285, 1296, 1373, 1476, 1641, 1726
NgoMIV	GCCGGC	1 cut(s)	140
NlaIII	CATG	8 cut(s)	277, 343, 470, 1056, 1184, 1401, 1514, 1648
NlaIV	GGNNCC	8 cut(s)	99, 290, 291, 345, 1016, 1461, 1576, 1845
NmuCI	GTSAC	3 cut(s)	13, 992, 1525
NsbI	TGCGCA	1 cut(s)	1583
NsiI	ATGCAT	1 cut(s)	838
NspI	RCATGY	2 cut(s)	1056, 1401
PciSI	GCTCTTC	1 cut(s)	1164
PcsI	WCGNNNNNNNCGW	1 cut(s)	195
PctI	GAATGC	2 cut(s)	753, 1476
PdiI	GCCGGC	1 cut(s)	142
PfeI	GAWTC	7 cut(s)	356, 631, 671, 733, 959, 1145, 1897
PflFI	GACNNNGTC	2 cut(s)	281, 409
PflMI	CCANNNNNTGG	2 cut(s)	340, 1562
PfoI	TCCNGGA	1 cut(s)	285
PleI	GAGTC	3 cut(s)	116, 940, 1393
PpsI	GAGTC	3 cut(s)	116, 940, 1393
Ppu21I	YACGTR	2 cut(s)	1631, 1721
PpuMI	RGGWCCY	2 cut(s)	289, 538
PshAI	GACNNNNGTC	1 cut(s)	931
Psp5II	RGGWCCY	2 cut(s)	289, 538
Psp6I	CCWGG	3 cut(s)	544, 1017, 1462
PspFI	CCCAGC	2 cut(s)	19, 55
PspGI	CCWGG	3 cut(s)	544, 1017, 1462
PspN4I	GGNNCC	8 cut(s)	99, 290, 291, 345, 1016, 1461, 1576, 1845
PspPI	GGNCC	4 cut(s)	97, 283, 289, 538
PspPPI	RGGWCCY	2 cut(s)	289, 538
PstI	CTGCAG	1 cut(s)	1440
PstNI	CAGNNNCTG	2 cut(s)	409, 489
PsuI	RGATCY	3 cut(s)	1105, 1296, 1476
PsyI	GACNNNGTC	2 cut(s)	281, 409
PvuII	CAGCTG	1 cut(s)	1486
RsaI	GTAC	4 cut(s)	895, 999, 1576, 1745
RsaNI	GTAC	4 cut(s)	894, 998, 1575, 1744
RseI	CAYNNNNRTG	2 cut(s)	437, 1311
SalI	GTCGAC	1 cut(s)	197
SapI	GCTCTTC	1 cut(s)	1164
SaqAI	TTAA	5 cut(s)	375, 426, 1044, 1338, 1933
Sau3AI	GATC	8 cut(s)	1021, 1105, 1285, 1296, 1373, 1476, 1641, 1726
Sau96I	GGNCC	4 cut(s)	97, 283, 289, 538
SchI	GAGTC	3 cut(s)	116, 941, 1394
ScrFI	CCNGG	5 cut(s)	287, 546, 1019, 1464, 1782
SduI	GDGCHC	2 cut(s)	480, 1159
SfaNI	GCATC	7 cut(s)	823, 845, 864, 953, 961, 997, 1356
SfcI	CTRYAG	1 cut(s)	1436
SgrAI	CRCCGGYG	1 cut(s)	499
SgrDI	CGTCGACG	1 cut(s)	197
SinI	GGWCC	4 cut(s)	97, 283, 289, 538
SmiMI	CAYNNNNRTG	2 cut(s)	437, 1311
SmlI	CTYRAG	3 cut(s)	1121, 1300, 1680
SmoI	CTYRAG	3 cut(s)	1121, 1300, 1680
Sse9I	AATT	6 cut(s)	568, 828, 1040, 1093, 1237, 1536
SspI	AATATT	1 cut(s)	1548
SspMI	CTAG	3 cut(s)	924, 1011, 1389
StyD4I	CCNGG	5 cut(s)	285, 544, 1017, 1462, 1780
StyI	CCWWGG	3 cut(s)	174, 339, 841
TaaI	ACNGT	8 cut(s)	13, 411, 491, 511, 1232, 1452, 1525, 1600
TaiI	ACGT	4 cut(s)	931, 999, 1633, 1723
TaqI	TCGA	3 cut(s)	156, 198, 626
TasI	AATT	6 cut(s)	568, 828, 1040, 1093, 1237, 1536
TatI	WGTACW	1 cut(s)	893
TauI	GCSGC	4 cut(s)	53, 140, 225, 1628
TfiI	GAWTC	7 cut(s)	356, 631, 671, 733, 959, 1145, 1897
Tru1I	TTAA	5 cut(s)	375, 426, 1044, 1338, 1933
Tru9I	TTAA	5 cut(s)	375, 426, 1044, 1338, 1933
TscAI	CASTG	8 cut(s)	245, 414, 478, 994, 1357, 1528, 1605, 1891
TseFI	GTSAC	3 cut(s)	13, 992, 1525
TseI	GCWGC	7 cut(s)	91, 162, 1177, 1369, 1486, 1852, 1877
Tsp45I	GTSAC	3 cut(s)	13, 992, 1525
TspDTI	ATGAA	5 cut(s)	1116, 1155, 1290, 1739, 1804
TspGWI	ACGGA	1 cut(s)	250
TspRI	CASTG	8 cut(s)	245, 414, 478, 994, 1357, 1528, 1605, 1891
Tth111I	GACNNNGTC	2 cut(s)	281, 409
Van91I	CCANNNNNTGG	2 cut(s)	340, 1562
VpaK11BI	GGWCC	4 cut(s)	97, 283, 289, 538
XapI	RAATTY	3 cut(s)	568, 1040, 1237
XceI	RCATGY	2 cut(s)	1056, 1401
XmiI	GTMKAC	1 cut(s)	198
XspI	CTAG	3 cut(s)	924, 1011, 1389
Zsp2I	ATGCAT	1 cut(s)	838

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.