Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0001896

Physical Location & Seq

Genomic Coordinates Reverse (-)

28064128 .. 28160608

Gene Structure 96481 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG278400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1698 bp

ATGGACGCCACCGTCACCCCAGCCCCAATCCCCGACCCGAACCCGAACGCCGTCTCCTGTTGGAGCAACATCGTGAAGAAGCAGCCGGACCCAAAGCCCCAAAACTCCTCCGACTCCTCAATCGCCGCCGGCAAAGTATTCGTCGAAAGCTGTAAGTCCTCCAAGGGCATAGCCGTCGCCGTCGTCGACGCCAATGCTATCATTCAAGGCGGCGAGACCCTCGCCCACTGCGCCGACAAGTTCGTCTCCGTCCCAGAGGTCATGGACGAGGTCCGTGACCCTGTTTCCCGCCACCGCCTCGCCGTCGTTCCCTTCCAAGTTCAGACCATGGAACCCACCCCTGAATCCCTCAATAAAGTTGTTAAGTTTGCGAGGGCTACTGGGGATTTACAGACACTGTCAGATGTGGATGTTAAGCTCATTGCTATGACTTATACATTGGAGGCTCAGATACATGGCACTGAGCACCTCAGGGACTGTCCTCCGCCGGTGCATACTGTCAATGTGAGGAGGTTGCCGGAGAAGGACTTGCCCGGGTGGGGAAATAATGTGCCTAATTTGGAAGAGTGGGAAGCGCTGGAGAACGAAGCGGAGGATAAGTTGAACCCCAGTTCGAGGATTCTTCCGCTGAAAGATATAAACTTGAATGTTATTGAGGATTCTGAGAGTCGTTCTGTTGATGGTTCTGCGGTGGAAGTTACGAGTGATGTTCGTTCTGAGAATCAGGAGGGTGGTGAGGGCATTCAGGGGAGACATAGGAGATATTTTCCAAAGAAGAAAGAGATAAAGATTGAAGGAAAGATGGTTTCGGATGGAATTGATGCATCCCAAGGACAAGCTGATGATAATGCGGGTGATTGGATGCCTGCCGTCAGTCGGAGTACACATAGAAGGTTTTTGAGAAGAAAAGCAAGACGTGAGTCTTATGAGGCATCGGCTGATAATGATTCTCAGCAAGATGCTGAGGAAAACACCAGTGGTGACGTACTTGTAGATGCTAGGAGCCAGGATCAAACATCGCCTTCTAAATTTGAAGAGGCATGTTGCAGACCTGTGGAGAGTGAGATGACAGAAGAGAAGAATTGTGATGAAGATCTTTCCTCAATCCTTGAGCAAACAAGGCGTGATGAAGATTCACTAAGGGCTCTTCAAAAAGGGAAGGAGCAGCATGGGGTTGAGGATAATGATTTCAAAGCAGGGGAAAGCACTTCTGATAACAGTGTGAATTTTGCTGTTGAGGGAGATGAGGTTGAAGTGATAAATGAAGGTCTGGATCACTTGGAGATCTCAAGTCATAATGATGGTAGTGTTGATACATCAAATGTTAACGATGATAGCAGTGAGCAGAGCTGGATGCTGCGATCCTTATCTGAGTCTAGTGTAGCATGTATAACAAGTGATTTTGCAATGCAAAATGTTATTCTGCAGATGGGTTTACGGTTGTTGGCACCAGGAGGAATGCAGATCCGCCAGCTGCACAGGTGGATTTTGAAATGCCATGCTTGTAACACTGTGACTGCTGAAATTGGGAGAATATTTTGTCCAAAGTGTGGAAATGGTGGTACCTTGCGCAAGGTAGCAGTTACAGTGGGTGAGAATGGGATTATTCTTGCGGCACATAAGCCTCGGATCACGTTGCGTGGCACAAGATTTTCACTTCCTTTAACTCAATTAAGGTGGAAGAAATGCCATTACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

NOB1_Zn_bind PIN_6

Protein Analysis

565

Amino Acids

62.27

Weight (kDa)

5.05

Isoelectric Point (pI)

60.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PIN_6	PF17146	61 - 147	6.1e-26	PIN domain of ribonuclease
Zn_ribbon_NOB1	PF08772	489 - 556	1.8e-20	Nin one binding (NOB1) Zn-ribbon like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001896)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G41190
fragaria_vesca	FvH4_5g23090
malus_domestica	MD14G1101800.v1.1
prunus_persica	Prupe.5G097400_v2.0.a1
pyrus_communis	pycom06g07650 pycom14g09860
rosa_chinensis	RchiOBHm_Chr2g0099081 RchiOBHm_Chr7g0179141 RchiOBHm_Chr7g0211871 RchiOBHm_Chr7g0211921 RchiOBHm_Chr7g0211961
rosa_laevigata	RLG00000002953 RLG00000002956 RLG00000005381 RLG00000016846 RLG00000021575
rosa_multiflora	Rmu_sc0000888.1_g000019 Rmu_sc0009005.1_g000003 Rmu_sc0017524.1_g000001 Rmu_sc0018807.1_g000007 Rmu_sc0022966.1_g000001
rosa_roxburghii	Rroxscaffold_2G00143460 Rroxscaffold_3G00247290 Rroxscaffold_3G00247320 Rroxscaffold_3G00274270 Rroxscaffold_3G00274340
rosa_rugosa	Rorug02G0076500 Rorug06G0421300 Rorug07G0129500 Rorug07G0129600
rosa_samantha	Rh2AG125600 Rh2BG128900 Rh2CG129900 Rh2DG130300 Rh7AG020500 Rh7AG262400 Rh7BG020600 Rh7BG255900 Rh7CG021700 Rh7CG278400 Rh7DG021100 Rh7DG268900 Rh7DG269200
rosa_wichuraiana	Rw7G001720 Rw7G022370 Rw7G022390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	11, 242
Acc16I	TGCGCA	1 cut(s)	1571
Acc65I	GGTACC	1 cut(s)	1562
AccB1I	GGYRCC	2 cut(s)	1447, 1562
AccB7I	CCANNNNNTGG	1 cut(s)	1550
AccI	GTMKAC	1 cut(s)	186
AclWI	GGATC	5 cut(s)	1017, 1281, 1356, 1459, 1637
AcsI	RAATTY	2 cut(s)	1028, 1225
AcyI	GRCGYC	2 cut(s)	6, 189
AfaI	GTAC	3 cut(s)	883, 987, 1564
AfeI	AGCGCT	1 cut(s)	576
AfiI	CCNNNNNNNGG	4 cut(s)	539, 615, 876, 1550
AgsI	TTSAA	9 cut(s)	206, 604, 646, 794, 1034, 1151, 1192, 1253, 1492
AjiI	CACGTC	1 cut(s)	917
AjnI	CCWGG	2 cut(s)	1005, 1450
AloI	GAACNNNNNNTCC	2 cut(s)	38, 70
AluBI	AGCT	5 cut(s)	150, 418, 839, 1350, 1474
AluI	AGCT	5 cut(s)	150, 418, 839, 1350, 1474
Alw21I	GWGCWC	1 cut(s)	468
Alw26I	GTCTC	4 cut(s)	58, 209, 250, 745
AlwI	GGATC	5 cut(s)	1017, 1281, 1356, 1459, 1637
AlwNI	CAGNNNCTG	2 cut(s)	397, 477
Ama87I	CYCGRG	1 cut(s)	533
Aor51HI	AGCGCT	1 cut(s)	576
ApeKI	GCWGC	4 cut(s)	82, 1165, 1357, 1474
ApoI	RAATTY	2 cut(s)	1028, 1225
ArsI	GACNNNNNNTTYG	2 cut(s)	126, 158
Asp718I	GGTACC	1 cut(s)	1562
AspLEI	GCGC	3 cut(s)	233, 577, 1572
AspS9I	GGNCC	2 cut(s)	88, 271
AsuC2I	CCSGG	2 cut(s)	534, 535
AsuHPI	GGTGA	5 cut(s)	7, 746, 866, 992, 1604
AvaI	CYCGRG	1 cut(s)	533
AvaII	GGWCC	2 cut(s)	88, 271
AxyI	CCTNAGG	1 cut(s)	470
BanI	GGYRCC	2 cut(s)	1447, 1562
BanII	GRGCYC	1 cut(s)	1147
Bbv12I	GWGCWC	1 cut(s)	468
BbvCI	CCTCAGC	1 cut(s)	963
BbvI	GCAGC	4 cut(s)	94, 1177, 1344, 1461
BccI	CCATC	5 cut(s)	674, 796, 806, 1295, 1423
BceAI	ACGGC	5 cut(s)	35, 158, 164, 287, 854
BcgI	CGANNNNNNTGC	6 cut(s)	121, 155, 157, 176, 191, 210
BciT130I	CCWGG	2 cut(s)	1007, 1452
BcnI	CCSGG	2 cut(s)	534, 535
BcoDI	GTCTC	4 cut(s)	58, 209, 250, 745
BfaI	CTAG	2 cut(s)	999, 1377
BfmI	CTRYAG	1 cut(s)	1424
BfoI	RGCGCY	1 cut(s)	578
BglII	AGATCT	2 cut(s)	1093, 1284
BisI	GCNGC	7 cut(s)	83, 126, 211, 1166, 1358, 1475, 1614
BlsI	GCNGC	7 cut(s)	84, 127, 212, 1167, 1359, 1476, 1615
Bme1390I	CCNGG	4 cut(s)	534, 535, 1007, 1452
Bme18I	GGWCC	2 cut(s)	88, 271
BmeT110I	CYCGRG	1 cut(s)	533
BmgBI	CACGTC	1 cut(s)	917
BmgT120I	GGNCC	2 cut(s)	88, 271
BmiI	GGNNCC	5 cut(s)	90, 333, 1004, 1449, 1564
BmrFI	CCNGG	4 cut(s)	534, 535, 1007, 1452
BmrI	ACTGGG	2 cut(s)	390, 603
BmsI	GCATC	7 cut(s)	811, 833, 852, 941, 949, 985, 1344
BmuI	ACTGGG	2 cut(s)	390, 603
BoxI	GACNNNNGTC	1 cut(s)	919
BpmI	CTGGAG	1 cut(s)	599
Bpu10I	CCTNAGC	1 cut(s)	963
BpuEI	CTTGAG	2 cut(s)	1130, 1273
BpuMI	CCSGG	2 cut(s)	534, 535
BsaBI	GATNNNNATC	2 cut(s)	1092, 1366
BsaHI	GRCGYC	2 cut(s)	6, 189
BsaI	GGTCTC	1 cut(s)	209
BsaJI	CCNNGG	5 cut(s)	162, 327, 533, 829, 1625
BsaXI	ACNNNNNCTCC	6 cut(s)	38, 68, 584, 614, 1233, 1263
Bsc4I	CCNNNNNNNGG	4 cut(s)	539, 615, 876, 1550
Bse118I	RCCGGY	2 cut(s)	128, 487
Bse1I	ACTGG	3 cut(s)	385, 609, 975
Bse21I	CCTNAGG	1 cut(s)	470
Bse3DI	GCAATG	2 cut(s)	420, 1413
Bse8I	GATNNNNATC	2 cut(s)	1092, 1366
BseBI	CCWGG	2 cut(s)	1007, 1452
BseDI	CCNNGG	5 cut(s)	162, 327, 533, 829, 1625
BseGI	GGATG	5 cut(s)	415, 817, 824, 867, 1359
BseJI	GATNNNNATC	2 cut(s)	1092, 1366
BseLI	CCNNNNNNNGG	4 cut(s)	539, 615, 876, 1550
BseMI	GCAATG	2 cut(s)	420, 1413
BseMII	CTCAG	8 cut(s)	453, 461, 484, 654, 708, 954, 965, 1362
BseNI	ACTGG	3 cut(s)	385, 609, 975
BseRI	GAGGAG	3 cut(s)	97, 106, 523
BseXI	GCAGC	4 cut(s)	94, 1177, 1344, 1461
BseYI	CCCAGC	1 cut(s)	19
BsgI	GTGCAG	1 cut(s)	1460
BshNI	GGYRCC	2 cut(s)	1447, 1562
BsiHKAI	GWGCWC	1 cut(s)	468
BsiHKCI	CYCGRG	1 cut(s)	533
BsiSI	CCGG	5 cut(s)	86, 129, 488, 518, 534
BslFI	GGGAC	2 cut(s)	236, 488
BslI	CCNNNNNNNGG	4 cut(s)	539, 615, 876, 1550
BsmAI	GTCTC	4 cut(s)	58, 209, 250, 745
BsmBI	CGTCTC	2 cut(s)	58, 250
BsmFI	GGGAC	2 cut(s)	236, 488
BsmI	GAATGC	2 cut(s)	741, 1464
Bso31I	GGTCTC	1 cut(s)	209
BsoBI	CYCGRG	1 cut(s)	533
Bsp1286I	GDGCHC	2 cut(s)	468, 1147
Bsp143I	GATC	7 cut(s)	1009, 1093, 1273, 1284, 1361, 1464, 1629
Bsp19I	CCATGG	1 cut(s)	327
BspCNI	CTCAG	8 cut(s)	454, 460, 483, 655, 709, 955, 964, 1363
BspLI	GGNNCC	5 cut(s)	90, 333, 1004, 1449, 1564
BspMAI	CTGCAG	1 cut(s)	1428
BspPI	GGATC	5 cut(s)	1017, 1281, 1356, 1459, 1637
BspQI	GCTCTTC	1 cut(s)	1152
BspT107I	GGYRCC	2 cut(s)	1447, 1562
BspTNI	GGTCTC	1 cut(s)	209
BsrDI	GCAATG	2 cut(s)	420, 1413
BsrFI	RCCGGY	2 cut(s)	128, 487
BsrI	ACTGG	3 cut(s)	385, 609, 975
BssAI	RCCGGY	2 cut(s)	128, 487
BssECI	CCNNGG	5 cut(s)	162, 327, 533, 829, 1625
BssMI	GATC	7 cut(s)	1009, 1093, 1273, 1284, 1361, 1464, 1629
BssNI	GRCGYC	2 cut(s)	6, 189
BssT1I	CCWWGG	3 cut(s)	162, 327, 829
Bst2UI	CCWGG	2 cut(s)	1007, 1452
Bst4CI	ACNGT	8 cut(s)	13, 399, 479, 499, 1220, 1440, 1513, 1588
Bst6I	CTCTTC	4 cut(s)	558, 1029, 1068, 1152
BstACI	GRCGYC	2 cut(s)	6, 189
BstC8I	GCNNGC	3 cut(s)	130, 867, 1472
BstDEI	CTNAG	9 cut(s)	447, 462, 470, 663, 717, 951, 963, 1139, 1371
BstDSI	CCRYGG	1 cut(s)	327
BstF5I	GGATG	5 cut(s)	415, 817, 824, 867, 1359
BstH2I	RGCGCY	1 cut(s)	578
BstHHI	GCGC	3 cut(s)	233, 577, 1572
BstKTI	GATC	7 cut(s)	1012, 1096, 1276, 1287, 1364, 1467, 1632
BstMAI	GTCTC	4 cut(s)	58, 209, 250, 745
BstMBI	GATC	7 cut(s)	1009, 1093, 1273, 1284, 1361, 1464, 1629
BstMWI	GCNNNNNNNGC	2 cut(s)	230, 1120
BstNI	CCWGG	2 cut(s)	1007, 1452
BstNSI	RCATGY	2 cut(s)	1044, 1389
BstPAI	GACNNNNGTC	1 cut(s)	919
BstSCI	CCNGG	4 cut(s)	532, 533, 1005, 1450
BstSFI	CTRYAG	1 cut(s)	1424
BstV1I	GCAGC	4 cut(s)	94, 1177, 1344, 1461
BstX2I	RGATCY	3 cut(s)	1093, 1284, 1464
BstYI	RGATCY	3 cut(s)	1093, 1284, 1464
Bsu36I	CCTNAGG	1 cut(s)	470
BtgI	CCRYGG	1 cut(s)	327
BtgZI	GCGATG	1 cut(s)	1002
BtrI	CACGTC	1 cut(s)	917
BtsCI	GGATG	5 cut(s)	415, 817, 824, 867, 1359
BtsI	GCAGTG	2 cut(s)	226, 1345
BtsIMutI	CAGTG	8 cut(s)	226, 395, 459, 982, 1225, 1345, 1509, 1593
Cac8I	GCNNGC	3 cut(s)	130, 867, 1472
CaiI	CAGNNNCTG	2 cut(s)	397, 477
CfoI	GCGC	3 cut(s)	233, 577, 1572
Cfr10I	RCCGGY	2 cut(s)	128, 487
Cfr13I	GGNCC	2 cut(s)	88, 271
Cfr9I	CCCGGG	1 cut(s)	533
CseI	GACGC	2 cut(s)	14, 197
Csp6I	GTAC	3 cut(s)	882, 986, 1563
CspCI	CAANNNNNGTGG	2 cut(s)	1658, 1693
CviAII	CATG	7 cut(s)	262, 328, 455, 1041, 1169, 1386, 1499
CviQI	GTAC	3 cut(s)	882, 986, 1563
DdeI	CTNAG	9 cut(s)	447, 462, 470, 663, 717, 951, 963, 1139, 1371
DpnI	GATC	7 cut(s)	1011, 1095, 1275, 1286, 1363, 1466, 1631
DpnII	GATC	7 cut(s)	1009, 1093, 1273, 1284, 1361, 1464, 1629
DrdI	GACNNNNNNGTC	2 cut(s)	11, 242
DseDI	GACNNNNNNGTC	2 cut(s)	11, 242
Eam1104I	CTCTTC	4 cut(s)	558, 1029, 1068, 1152
EarI	CTCTTC	4 cut(s)	558, 1029, 1068, 1152
EciI	GGCGGA	2 cut(s)	474, 1457
Eco130I	CCWWGG	3 cut(s)	162, 327, 829
Eco24I	GRGCYC	1 cut(s)	1147
Eco31I	GGTCTC	1 cut(s)	209
Eco47I	GGWCC	2 cut(s)	88, 271
Eco47III	AGCGCT	1 cut(s)	576
Eco81I	CCTNAGG	1 cut(s)	470
Eco88I	CYCGRG	1 cut(s)	533
EcoRII	CCWGG	2 cut(s)	1005, 1450
EcoT14I	CCWWGG	3 cut(s)	162, 327, 829
EcoT22I	ATGCAT	1 cut(s)	826
EcoT38I	GRGCYC	1 cut(s)	1147
ErhI	CCWWGG	3 cut(s)	162, 327, 829
Esp3I	CGTCTC	2 cut(s)	58, 250
FaeI	CATG	7 cut(s)	265, 331, 458, 1044, 1172, 1389, 1502
FaqI	GGGAC	2 cut(s)	236, 488
FatI	CATG	7 cut(s)	261, 327, 454, 1040, 1168, 1385, 1498
FauI	CCCGC	2 cut(s)	296, 844
FblI	GTMKAC	1 cut(s)	186
Fnu4HI	GCNGC	7 cut(s)	83, 126, 211, 1166, 1358, 1475, 1614
FokI	GGATG	5 cut(s)	422, 811, 824, 874, 1366
FriOI	GRGCYC	1 cut(s)	1147
Fsp4HI	GCNGC	7 cut(s)	83, 126, 211, 1166, 1358, 1475, 1614
FspBI	CTAG	2 cut(s)	999, 1377
FspI	TGCGCA	1 cut(s)	1571
GlaI	GCGC	3 cut(s)	232, 576, 1571
GluI	GCNGC	7 cut(s)	83, 126, 211, 1166, 1358, 1475, 1614
GsaI	CCCAGC	1 cut(s)	23
GsuI	CTGGAG	1 cut(s)	599
HaeII	RGCGCY	1 cut(s)	578
HapII	CCGG	5 cut(s)	86, 129, 488, 518, 534
HgaI	GACGC	2 cut(s)	14, 197
HhaI	GCGC	3 cut(s)	233, 577, 1572
Hin1I	GRCGYC	2 cut(s)	6, 189
Hin1II	CATG	7 cut(s)	265, 331, 458, 1044, 1172, 1389, 1502
Hin6I	GCGC	3 cut(s)	231, 575, 1570
HinP1I	GCGC	3 cut(s)	231, 575, 1570
HincII	GTYRAC	2 cut(s)	187, 1327
HindII	GTYRAC	2 cut(s)	187, 1327
HpaI	GTTAAC	1 cut(s)	1327
HpaII	CCGG	5 cut(s)	86, 129, 488, 518, 534
HphI	GGTGA	5 cut(s)	7, 746, 866, 992, 1604
Hpy166II	GTNNAC	4 cut(s)	187, 884, 1327, 1436
Hpy188III	TCNNGA	3 cut(s)	73, 725, 1271
Hpy8I	GTNNAC	4 cut(s)	187, 884, 1327, 1436
Hpy99I	CGWCG	6 cut(s)	146, 179, 185, 188, 191, 308
HpyAV	CCTTC	7 cut(s)	322, 517, 788, 885, 1032, 1153, 1259
HpyCH4III	ACNGT	8 cut(s)	13, 399, 479, 499, 1220, 1440, 1513, 1588
HpyCH4IV	ACGT	3 cut(s)	916, 984, 1634
HpyCH4V	TGCA	8 cut(s)	493, 824, 1047, 1406, 1411, 1426, 1462, 1477
HpyF10VI	GCNNNNNNNGC	2 cut(s)	230, 1120
HpyF3I	CTNAG	9 cut(s)	447, 462, 470, 663, 717, 951, 963, 1139, 1371
HpySE526I	ACGT	3 cut(s)	916, 984, 1634
Hsp92I	GRCGYC	2 cut(s)	6, 189
Hsp92II	CATG	7 cut(s)	265, 331, 458, 1044, 1172, 1389, 1502
HspAI	GCGC	3 cut(s)	231, 575, 1570
KpnI	GGTACC	1 cut(s)	1566
KroI	GCCGGC	1 cut(s)	128
KroNI	GCCGGC	1 cut(s)	130
KspAI	GTTAAC	1 cut(s)	1327
Kzo9I	GATC	7 cut(s)	1009, 1093, 1273, 1284, 1361, 1464, 1629
LguI	GCTCTTC	1 cut(s)	1152
LmnI	GCTCC	3 cut(s)	63, 1002, 1162
Lsp1109I	GCAGC	4 cut(s)	94, 1177, 1344, 1461
LweI	GCATC	7 cut(s)	811, 833, 852, 941, 949, 985, 1344
MaeI	CTAG	2 cut(s)	999, 1377
MaeII	ACGT	3 cut(s)	916, 984, 1634
MaeIII	GTNAC	7 cut(s)	13, 275, 697, 980, 1505, 1513, 1582
MalI	GATC	7 cut(s)	1011, 1095, 1275, 1286, 1363, 1466, 1631
MboI	GATC	7 cut(s)	1009, 1093, 1273, 1284, 1361, 1464, 1629
MflI	RGATCY	3 cut(s)	1093, 1284, 1464
MhlI	GDGCHC	2 cut(s)	468, 1147
MluCI	AATT	7 cut(s)	556, 816, 1028, 1081, 1225, 1524, 1670
MlyI	GAGTC	4 cut(s)	107, 676, 929, 1382
MmeI	TCCRAC	3 cut(s)	41, 135, 857
Mph1103I	ATGCAT	1 cut(s)	826
MroNI	GCCGGC	1 cut(s)	128
MseI	TTAA	5 cut(s)	363, 414, 1326, 1664, 1673
MslI	CAYNNNNRTG	2 cut(s)	425, 1299
MspA1I	CMGCKG	2 cut(s)	628, 1474
MspI	CCGG	5 cut(s)	86, 129, 488, 518, 534
MspR9I	CCNGG	4 cut(s)	534, 535, 1007, 1452
Mva1269I	GAATGC	2 cut(s)	741, 1464
MvaI	CCWGG	2 cut(s)	1007, 1452
MwoI	GCNNNNNNNGC	2 cut(s)	230, 1120
NaeI	GCCGGC	1 cut(s)	130
NciI	CCSGG	2 cut(s)	534, 535
NcoI	CCATGG	1 cut(s)	327
NdeII	GATC	7 cut(s)	1009, 1093, 1273, 1284, 1361, 1464, 1629
NgoMIV	GCCGGC	1 cut(s)	128
NlaIII	CATG	7 cut(s)	265, 331, 458, 1044, 1172, 1389, 1502
NlaIV	GGNNCC	5 cut(s)	90, 333, 1004, 1449, 1564
NmuCI	GTSAC	4 cut(s)	13, 275, 980, 1513
NsbI	TGCGCA	1 cut(s)	1571
NsiI	ATGCAT	1 cut(s)	826
NspI	RCATGY	2 cut(s)	1044, 1389
PciSI	GCTCTTC	1 cut(s)	1152
PcsI	WCGNNNNNNNCGW	1 cut(s)	183
PctI	GAATGC	2 cut(s)	741, 1464
PdiI	GCCGGC	1 cut(s)	130
PfeI	GAWTC	6 cut(s)	344, 619, 659, 721, 947, 1133
PflFI	GACNNNGTC	2 cut(s)	269, 397
PflMI	CCANNNNNTGG	1 cut(s)	1550
PkrI	GCNGC	7 cut(s)	84, 127, 212, 1167, 1359, 1476, 1615
PleI	GAGTC	4 cut(s)	107, 675, 928, 1381
PpsI	GAGTC	4 cut(s)	107, 675, 928, 1381
PshAI	GACNNNNGTC	1 cut(s)	919
Psp6I	CCWGG	2 cut(s)	1005, 1450
PspFI	CCCAGC	1 cut(s)	19
PspGI	CCWGG	2 cut(s)	1005, 1450
PspN4I	GGNNCC	5 cut(s)	90, 333, 1004, 1449, 1564
PspPI	GGNCC	2 cut(s)	88, 271
PstI	CTGCAG	1 cut(s)	1428
PstNI	CAGNNNCTG	2 cut(s)	397, 477
PsuI	RGATCY	3 cut(s)	1093, 1284, 1464
PsyI	GACNNNGTC	2 cut(s)	269, 397
PvuII	CAGCTG	1 cut(s)	1474
RsaI	GTAC	3 cut(s)	883, 987, 1564
RsaNI	GTAC	3 cut(s)	882, 986, 1563
RseI	CAYNNNNRTG	2 cut(s)	425, 1299
SalI	GTCGAC	1 cut(s)	185
SapI	GCTCTTC	1 cut(s)	1152
SaqAI	TTAA	5 cut(s)	363, 414, 1326, 1664, 1673
SatI	GCNGC	7 cut(s)	83, 126, 211, 1166, 1358, 1475, 1614
Sau3AI	GATC	7 cut(s)	1009, 1093, 1273, 1284, 1361, 1464, 1629
Sau96I	GGNCC	2 cut(s)	88, 271
SchI	GAGTC	4 cut(s)	107, 676, 929, 1382
ScrFI	CCNGG	4 cut(s)	534, 535, 1007, 1452
SduI	GDGCHC	2 cut(s)	468, 1147
SfaNI	GCATC	7 cut(s)	811, 833, 852, 941, 949, 985, 1344
SfcI	CTRYAG	1 cut(s)	1424
SgrAI	CRCCGGYG	1 cut(s)	487
SgrDI	CGTCGACG	1 cut(s)	185
SinI	GGWCC	2 cut(s)	88, 271
SmaI	CCCGGG	1 cut(s)	535
SmiMI	CAYNNNNRTG	2 cut(s)	425, 1299
SmlI	CTYRAG	2 cut(s)	1109, 1288
SmoI	CTYRAG	2 cut(s)	1109, 1288
Sse9I	AATT	7 cut(s)	556, 816, 1028, 1081, 1225, 1524, 1670
SspI	AATATT	1 cut(s)	1536
SspMI	CTAG	2 cut(s)	999, 1377
StyD4I	CCNGG	4 cut(s)	532, 533, 1005, 1450
StyI	CCWWGG	3 cut(s)	162, 327, 829
TaaI	ACNGT	8 cut(s)	13, 399, 479, 499, 1220, 1440, 1513, 1588
TaiI	ACGT	3 cut(s)	919, 987, 1637
TaqI	TCGA	3 cut(s)	144, 186, 614
TasI	AATT	7 cut(s)	556, 816, 1028, 1081, 1225, 1524, 1670
TatI	WGTACW	1 cut(s)	881
TauI	GCSGC	3 cut(s)	128, 213, 1616
TfiI	GAWTC	6 cut(s)	344, 619, 659, 721, 947, 1133
Tru1I	TTAA	5 cut(s)	363, 414, 1326, 1664, 1673
Tru9I	TTAA	5 cut(s)	363, 414, 1326, 1664, 1673
TscAI	CASTG	8 cut(s)	233, 402, 466, 982, 1225, 1345, 1516, 1593
TseFI	GTSAC	4 cut(s)	13, 275, 980, 1513
TseI	GCWGC	4 cut(s)	82, 1165, 1357, 1474
Tsp45I	GTSAC	4 cut(s)	13, 275, 980, 1513
TspDTI	ATGAA	3 cut(s)	1104, 1143, 1278
TspGWI	ACGGA	2 cut(s)	238, 263
TspMI	CCCGGG	1 cut(s)	533
TspRI	CASTG	8 cut(s)	233, 402, 466, 982, 1225, 1345, 1516, 1593
Tth111I	GACNNNGTC	2 cut(s)	269, 397
Van91I	CCANNNNNTGG	1 cut(s)	1550
VpaK11BI	GGWCC	2 cut(s)	88, 271
XapI	RAATTY	2 cut(s)	1028, 1225
XceI	RCATGY	2 cut(s)	1044, 1389
XmaI	CCCGGG	1 cut(s)	533
XmiI	GTMKAC	1 cut(s)	186
XspI	CTAG	2 cut(s)	999, 1377
Zsp2I	ATGCAT	1 cut(s)	826

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.