Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0001896

Physical Location & Seq

Genomic Coordinates Reverse (-)

29099324 .. 29102778

Gene Structure 3455 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ18955

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1923 bp

ATGGACGCCACCGTCACCCCAGCCCCAATCCCCGACCCGAACCCGAACGCCGTCTCCTGTTGGAGCAACATCGTGAAGAAGCAGCCGGACCCAAAGCCCCAAAACTCCTCCGACTCCTCAATCGCCGCCGGCAAAGTATTCGTCGAAAGCTGTAAGTCCTCCAAGGGCATAGCCGTCGCCGTCGTCGACGCCAATGCTATCATTCAAGGCGGCGAGACCCTCGCCCACTGCGCCGACAAGTTCGTCTCCGTCCCAGAGGTCATGGACGAGGTCCGTGACCCTGTTTCCCGCCACCGCCTCGCCGTCGTTCCCTTCCAAGTTCAGACCATGGAACCCACCCCTGAATCCCTCAATAAAGTTGTTAAGTTTGCGAGGGCTACTGGGGATTTACAGACACTGTCAGATGTGGATGTTAAGCTCATTGCTATGACTTATACATTGGAGGCTCAGATACATGGCACTGAGCACCTCAGGGACTGTCCTCCGCCGGTGCATACTGTCAATGTGAGGAGGTTGCCGGAGAAGGACTTGCCCGGGTGGGGAAATAATGTGCCTAATTTGGAAGAGTGGGAAGCGCTGGAGAACGAAGCGGAGGATAAGTTGAACCCCAGTTCGAGGATTCTTCCGCTGAAAGATATAAACTTGAATGTTATTGAGGATTCTGAGAGTCGTTCTGTTGATGGTTCTGCCGTGGAAGTTACGAGTGATGTTCGTTCTGAGAATCAGGAGGGTGGTGAGGGCATTCAGGGGAGACATAGGAGATATTTTCCAAAGAAGAAAGAGATAAAGATTGAAGGAAAGATGGTTTCGGATGGAATTGATGCATCCCAAGGACAAGCTGATGATAATGCGGGTGATTGGATGCCTGCCGTCAGTCGGAGTACACATAGAAGGTTTTTGAGAAGAAAAGCAAGACGTGAGTCTTATGAGGCATCGGCTGATAATGATTCTCAGCAAGATGCTGAGGAAAACACCAGTGGTGACGTACTTGTAGATGCTAGGAGCCAGGATCAAACATCGCCTTCTAAATTTGAAGAGGCATGTTGCAGACCTGTGGAGAGTGAGATGACAGAAGAGAAGAATTGTGATGAAGATCTTTCCTCAATCCTTGAGCAAACAAGGCGTGATGAAGATTCACTAAGGGCTCTTCAAAAAGGGAAGGAGCAGCATGGGGTTGAGGATAATGATTTCAAAGCAGGGGAAAGCACTTCTGATAACAGTGTGAATTTTGCTGTTGAGGGAGATGAGGTTGAAGTGATAAATGAAGGTCTGGATCACTTGGAGATCTCAAGTCATAATGATGGTAGTGTTGATACATCAAATGTTAACGATGATAGCAGTGAGCAGAGCTGGATGCTGCGATCCTTATCTGAGTCTAGTGTAGCATGTATAACAAGTGATTTTGCAATGCAAAATGTTATTCTGCAGATGGGTTTACGGTTGTTGGCACCAGGAGGAATGCAGATCCGCCAGCTGCACAGGTGGATTTTGAAATGCCATGCTTGTAACACTGTGACTGCTGAAATTGGGAGAATATTTTGTCCAAAGTGTGGAAATGGTGGTACCTTGCGCAAGGTAGCAGTTACAGTGGGTGAGAATGGGATTATTCTTGCGGCACGTAAGCCTCGGATCACGTTGCGTGGCACAAGATTTTCACTTCCTTTACCTCAAGGTGGAAGAAATGCCATTACTAAGAACCCTGTTTTACGTGAGGATCAGCTCCCACAAAAGTACCTTCATCCAAAGACAAAAAAGAAAGCAAATAAGCCGGGAGATGACGACCTATTCACTTCCAATGACTTCATCTTCCGCCACCATTCTGATAAAAAGGCTCCTTTGCAGCCTCCTGTAAGGAAGGCATTGGCTGCTTTCAGTGGAAGGAGGAATCCCAACGACAATCATTATTCACATTCCAAGCATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

NOB1_Zn_bind PIN_6

Protein Analysis

640

Amino Acids

70.65

Weight (kDa)

5.51

Isoelectric Point (pI)

58.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PIN_6	PF17146	61 - 147	7.3e-26	PIN domain of ribonuclease
Zn_ribbon_NOB1	PF08772	489 - 559	6.6e-22	Nin one binding (NOB1) Zn-ribbon like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001896)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G41190
fragaria_vesca	FvH4_5g23090
malus_domestica	MD14G1101800.v1.1
prunus_persica	Prupe.5G097400_v2.0.a1
pyrus_communis	pycom06g07650 pycom14g09860
rosa_chinensis	RchiOBHm_Chr2g0099081 RchiOBHm_Chr7g0179141 RchiOBHm_Chr7g0211871 RchiOBHm_Chr7g0211921 RchiOBHm_Chr7g0211961
rosa_laevigata	RLG00000002953 RLG00000002956 RLG00000005381 RLG00000016846 RLG00000021575
rosa_multiflora	Rmu_sc0000888.1_g000019 Rmu_sc0009005.1_g000003 Rmu_sc0017524.1_g000001 Rmu_sc0018807.1_g000007 Rmu_sc0022966.1_g000001
rosa_roxburghii	Rroxscaffold_2G00143460 Rroxscaffold_3G00247290 Rroxscaffold_3G00247320 Rroxscaffold_3G00274270 Rroxscaffold_3G00274340
rosa_rugosa	Rorug02G0076500 Rorug06G0421300 Rorug07G0129500 Rorug07G0129600
rosa_samantha	Rh2AG125600 Rh2BG128900 Rh2CG129900 Rh2DG130300 Rh7AG020500 Rh7AG262400 Rh7BG020600 Rh7BG255900 Rh7CG021700 Rh7CG278400 Rh7DG021100 Rh7DG268900 Rh7DG269200
rosa_wichuraiana	Rw7G001720 Rw7G022370 Rw7G022390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	11, 242
Acc16I	TGCGCA	1 cut(s)	1571
Acc65I	GGTACC	1 cut(s)	1562
AccB1I	GGYRCC	2 cut(s)	1447, 1562
AccB7I	CCANNNNNTGG	1 cut(s)	1550
AccI	GTMKAC	1 cut(s)	186
AclWI	GGATC	6 cut(s)	1017, 1281, 1356, 1459, 1637, 1722
AcsI	RAATTY	2 cut(s)	1028, 1225
AcyI	GRCGYC	2 cut(s)	6, 189
AfaI	GTAC	4 cut(s)	883, 987, 1564, 1733
AfeI	AGCGCT	1 cut(s)	576
AfiI	CCNNNNNNNGG	5 cut(s)	539, 615, 876, 1550, 1673
AgsI	TTSAA	9 cut(s)	206, 604, 646, 794, 1034, 1151, 1192, 1253, 1492
AjiI	CACGTC	1 cut(s)	917
AjnI	CCWGG	2 cut(s)	1005, 1450
AloI	GAACNNNNNNTCC	2 cut(s)	38, 70
AluBI	AGCT	6 cut(s)	150, 418, 839, 1350, 1474, 1720
AluI	AGCT	6 cut(s)	150, 418, 839, 1350, 1474, 1720
Alw21I	GWGCWC	1 cut(s)	468
Alw26I	GTCTC	4 cut(s)	58, 209, 250, 745
AlwI	GGATC	6 cut(s)	1017, 1281, 1356, 1459, 1637, 1722
AlwNI	CAGNNNCTG	2 cut(s)	397, 477
Ama87I	CYCGRG	1 cut(s)	533
Aor51HI	AGCGCT	1 cut(s)	576
ApeKI	GCWGC	6 cut(s)	82, 1165, 1357, 1474, 1840, 1865
ApoI	RAATTY	2 cut(s)	1028, 1225
ArsI	GACNNNNNNTTYG	2 cut(s)	126, 158
Asp718I	GGTACC	1 cut(s)	1562
AspLEI	GCGC	3 cut(s)	233, 577, 1572
AspS9I	GGNCC	2 cut(s)	88, 271
AsuC2I	CCSGG	3 cut(s)	534, 535, 1770
AsuHPI	GGTGA	5 cut(s)	7, 746, 866, 992, 1604
AvaI	CYCGRG	1 cut(s)	533
AvaII	GGWCC	2 cut(s)	88, 271
AxyI	CCTNAGG	1 cut(s)	470
BaeI	ACNNNNGTAYC	2 cut(s)	1715, 1748
BanI	GGYRCC	2 cut(s)	1447, 1562
BanII	GRGCYC	1 cut(s)	1147
Bbv12I	GWGCWC	1 cut(s)	468
BbvCI	CCTCAGC	1 cut(s)	963
BbvI	GCAGC	6 cut(s)	94, 1177, 1344, 1461, 1852, 1852
BccI	CCATC	5 cut(s)	674, 796, 806, 1295, 1423
BceAI	ACGGC	6 cut(s)	35, 158, 164, 287, 674, 854
BcgI	CGANNNNNNTGC	6 cut(s)	121, 155, 157, 176, 191, 210
BciT130I	CCWGG	2 cut(s)	1007, 1452
BcnI	CCSGG	3 cut(s)	534, 535, 1770
BcoDI	GTCTC	4 cut(s)	58, 209, 250, 745
BfaI	CTAG	2 cut(s)	999, 1377
BfmI	CTRYAG	1 cut(s)	1424
BfoI	RGCGCY	1 cut(s)	578
BglII	AGATCT	2 cut(s)	1093, 1284
BisI	GCNGC	9 cut(s)	83, 126, 211, 1166, 1358, 1475, 1614, 1841, 1866
BlsI	GCNGC	9 cut(s)	84, 127, 212, 1167, 1359, 1476, 1615, 1842, 1867
Bme1390I	CCNGG	5 cut(s)	534, 535, 1007, 1452, 1770
Bme18I	GGWCC	2 cut(s)	88, 271
BmeT110I	CYCGRG	1 cut(s)	533
BmgBI	CACGTC	1 cut(s)	917
BmgT120I	GGNCC	2 cut(s)	88, 271
BmiI	GGNNCC	6 cut(s)	90, 333, 1004, 1449, 1564, 1833
BmrFI	CCNGG	5 cut(s)	534, 535, 1007, 1452, 1770
BmrI	ACTGGG	2 cut(s)	390, 603
BmsI	GCATC	7 cut(s)	811, 833, 852, 941, 949, 985, 1344
BmuI	ACTGGG	2 cut(s)	390, 603
BoxI	GACNNNNGTC	1 cut(s)	919
BpmI	CTGGAG	1 cut(s)	599
Bpu10I	CCTNAGC	1 cut(s)	963
BpuEI	CTTGAG	3 cut(s)	1130, 1273, 1653
BpuMI	CCSGG	3 cut(s)	534, 535, 1770
BsaAI	YACGTR	2 cut(s)	1619, 1709
BsaBI	GATNNNNATC	2 cut(s)	1092, 1366
BsaHI	GRCGYC	2 cut(s)	6, 189
BsaI	GGTCTC	1 cut(s)	209
BsaJI	CCNNGG	6 cut(s)	162, 327, 533, 690, 829, 1625
BsaXI	ACNNNNNCTCC	6 cut(s)	38, 68, 584, 614, 1233, 1263
Bsc4I	CCNNNNNNNGG	5 cut(s)	539, 615, 876, 1550, 1673
Bse118I	RCCGGY	2 cut(s)	128, 487
Bse1I	ACTGG	3 cut(s)	385, 609, 975
Bse21I	CCTNAGG	1 cut(s)	470
Bse3DI	GCAATG	2 cut(s)	420, 1413
Bse8I	GATNNNNATC	2 cut(s)	1092, 1366
BseBI	CCWGG	2 cut(s)	1007, 1452
BseDI	CCNNGG	6 cut(s)	162, 327, 533, 690, 829, 1625
BseGI	GGATG	6 cut(s)	415, 817, 824, 867, 1359, 1738
BseJI	GATNNNNATC	2 cut(s)	1092, 1366
BseLI	CCNNNNNNNGG	5 cut(s)	539, 615, 876, 1550, 1673
BseMI	GCAATG	2 cut(s)	420, 1413
BseMII	CTCAG	8 cut(s)	453, 461, 484, 654, 708, 954, 965, 1362
BseNI	ACTGG	3 cut(s)	385, 609, 975
BseRI	GAGGAG	3 cut(s)	97, 106, 523
BseXI	GCAGC	6 cut(s)	94, 1177, 1344, 1461, 1852, 1852
BseYI	CCCAGC	1 cut(s)	19
BsgI	GTGCAG	1 cut(s)	1460
BshNI	GGYRCC	2 cut(s)	1447, 1562
BsiHKAI	GWGCWC	1 cut(s)	468
BsiHKCI	CYCGRG	1 cut(s)	533
BsiSI	CCGG	6 cut(s)	86, 129, 488, 518, 534, 1769
BslFI	GGGAC	2 cut(s)	236, 488
BslI	CCNNNNNNNGG	5 cut(s)	539, 615, 876, 1550, 1673
BsmAI	GTCTC	4 cut(s)	58, 209, 250, 745
BsmBI	CGTCTC	2 cut(s)	58, 250
BsmFI	GGGAC	2 cut(s)	236, 488
BsmI	GAATGC	2 cut(s)	741, 1464
Bso31I	GGTCTC	1 cut(s)	209
BsoBI	CYCGRG	1 cut(s)	533
Bsp1286I	GDGCHC	2 cut(s)	468, 1147
Bsp143I	GATC	8 cut(s)	1009, 1093, 1273, 1284, 1361, 1464, 1629, 1714
Bsp19I	CCATGG	1 cut(s)	327
BspCNI	CTCAG	8 cut(s)	454, 460, 483, 655, 709, 955, 964, 1363
BspLI	GGNNCC	6 cut(s)	90, 333, 1004, 1449, 1564, 1833
BspMAI	CTGCAG	1 cut(s)	1428
BspPI	GGATC	6 cut(s)	1017, 1281, 1356, 1459, 1637, 1722
BspQI	GCTCTTC	1 cut(s)	1152
BspT107I	GGYRCC	2 cut(s)	1447, 1562
BspTNI	GGTCTC	1 cut(s)	209
BsrDI	GCAATG	2 cut(s)	420, 1413
BsrFI	RCCGGY	2 cut(s)	128, 487
BsrI	ACTGG	3 cut(s)	385, 609, 975
BssAI	RCCGGY	2 cut(s)	128, 487
BssECI	CCNNGG	6 cut(s)	162, 327, 533, 690, 829, 1625
BssMI	GATC	8 cut(s)	1009, 1093, 1273, 1284, 1361, 1464, 1629, 1714
BssNI	GRCGYC	2 cut(s)	6, 189
BssT1I	CCWWGG	3 cut(s)	162, 327, 829
Bst2UI	CCWGG	2 cut(s)	1007, 1452
Bst4CI	ACNGT	8 cut(s)	13, 399, 479, 499, 1220, 1440, 1513, 1588
Bst6I	CTCTTC	4 cut(s)	558, 1029, 1068, 1152
BstACI	GRCGYC	2 cut(s)	6, 189
BstAPI	GCANNNNNTGC	1 cut(s)	1865
BstBAI	YACGTR	2 cut(s)	1619, 1709
BstC8I	GCNNGC	3 cut(s)	130, 867, 1472
BstDSI	CCRYGG	2 cut(s)	327, 690
BstF5I	GGATG	6 cut(s)	415, 817, 824, 867, 1359, 1738
BstH2I	RGCGCY	1 cut(s)	578
BstHHI	GCGC	3 cut(s)	233, 577, 1572
BstKTI	GATC	8 cut(s)	1012, 1096, 1276, 1287, 1364, 1467, 1632, 1717
BstMAI	GTCTC	4 cut(s)	58, 209, 250, 745
BstMBI	GATC	8 cut(s)	1009, 1093, 1273, 1284, 1361, 1464, 1629, 1714
BstMWI	GCNNNNNNNGC	3 cut(s)	230, 1120, 1865
BstNI	CCWGG	2 cut(s)	1007, 1452
BstNSI	RCATGY	2 cut(s)	1044, 1389
BstPAI	GACNNNNGTC	1 cut(s)	919
BstSCI	CCNGG	5 cut(s)	532, 533, 1005, 1450, 1768
BstSFI	CTRYAG	1 cut(s)	1424
BstV1I	GCAGC	6 cut(s)	94, 1177, 1344, 1461, 1852, 1852
BstX2I	RGATCY	3 cut(s)	1093, 1284, 1464
BstYI	RGATCY	3 cut(s)	1093, 1284, 1464
Bsu36I	CCTNAGG	1 cut(s)	470
BtgI	CCRYGG	2 cut(s)	327, 690
BtgZI	GCGATG	1 cut(s)	1002
BtrI	CACGTC	1 cut(s)	917
BtsCI	GGATG	6 cut(s)	415, 817, 824, 867, 1359, 1738
BtsI	GCAGTG	2 cut(s)	226, 1345
BtsIMutI	CAGTG	9 cut(s)	226, 395, 459, 982, 1225, 1345, 1509, 1593, 1879
Cac8I	GCNNGC	3 cut(s)	130, 867, 1472
CaiI	CAGNNNCTG	2 cut(s)	397, 477
CfoI	GCGC	3 cut(s)	233, 577, 1572
Cfr10I	RCCGGY	2 cut(s)	128, 487
Cfr13I	GGNCC	2 cut(s)	88, 271
Cfr9I	CCCGGG	1 cut(s)	533
CseI	GACGC	2 cut(s)	14, 197
Csp6I	GTAC	4 cut(s)	882, 986, 1563, 1732
CviAII	CATG	7 cut(s)	262, 328, 455, 1041, 1169, 1386, 1499
CviQI	GTAC	4 cut(s)	882, 986, 1563, 1732
DpnI	GATC	8 cut(s)	1011, 1095, 1275, 1286, 1363, 1466, 1631, 1716
DpnII	GATC	8 cut(s)	1009, 1093, 1273, 1284, 1361, 1464, 1629, 1714
DrdI	GACNNNNNNGTC	2 cut(s)	11, 242
DseDI	GACNNNNNNGTC	2 cut(s)	11, 242
Eam1104I	CTCTTC	4 cut(s)	558, 1029, 1068, 1152
EarI	CTCTTC	4 cut(s)	558, 1029, 1068, 1152
EciI	GGCGGA	3 cut(s)	474, 1457, 1799
Eco130I	CCWWGG	3 cut(s)	162, 327, 829
Eco24I	GRGCYC	1 cut(s)	1147
Eco31I	GGTCTC	1 cut(s)	209
Eco47I	GGWCC	2 cut(s)	88, 271
Eco47III	AGCGCT	1 cut(s)	576
Eco81I	CCTNAGG	1 cut(s)	470
Eco88I	CYCGRG	1 cut(s)	533
EcoRII	CCWGG	2 cut(s)	1005, 1450
EcoT14I	CCWWGG	3 cut(s)	162, 327, 829
EcoT22I	ATGCAT	1 cut(s)	826
EcoT38I	GRGCYC	1 cut(s)	1147
ErhI	CCWWGG	3 cut(s)	162, 327, 829
Esp3I	CGTCTC	2 cut(s)	58, 250
FaeI	CATG	7 cut(s)	265, 331, 458, 1044, 1172, 1389, 1502
FaqI	GGGAC	2 cut(s)	236, 488
FatI	CATG	7 cut(s)	261, 327, 454, 1040, 1168, 1385, 1498
FauI	CCCGC	2 cut(s)	296, 844
FblI	GTMKAC	1 cut(s)	186
Fnu4HI	GCNGC	9 cut(s)	83, 126, 211, 1166, 1358, 1475, 1614, 1841, 1866
FokI	GGATG	6 cut(s)	422, 811, 824, 874, 1366, 1725
FriOI	GRGCYC	1 cut(s)	1147
Fsp4HI	GCNGC	9 cut(s)	83, 126, 211, 1166, 1358, 1475, 1614, 1841, 1866
FspBI	CTAG	2 cut(s)	999, 1377
FspI	TGCGCA	1 cut(s)	1571
GlaI	GCGC	3 cut(s)	232, 576, 1571
GluI	GCNGC	9 cut(s)	83, 126, 211, 1166, 1358, 1475, 1614, 1841, 1866
GsaI	CCCAGC	1 cut(s)	23
GsuI	CTGGAG	1 cut(s)	599
HaeII	RGCGCY	1 cut(s)	578
HapII	CCGG	6 cut(s)	86, 129, 488, 518, 534, 1769
HgaI	GACGC	2 cut(s)	14, 197
HhaI	GCGC	3 cut(s)	233, 577, 1572
Hin1I	GRCGYC	2 cut(s)	6, 189
Hin1II	CATG	7 cut(s)	265, 331, 458, 1044, 1172, 1389, 1502
Hin6I	GCGC	3 cut(s)	231, 575, 1570
HinP1I	GCGC	3 cut(s)	231, 575, 1570
HincII	GTYRAC	2 cut(s)	187, 1327
HindII	GTYRAC	2 cut(s)	187, 1327
HpaI	GTTAAC	1 cut(s)	1327
HpaII	CCGG	6 cut(s)	86, 129, 488, 518, 534, 1769
HphI	GGTGA	5 cut(s)	7, 746, 866, 992, 1604
Hpy166II	GTNNAC	4 cut(s)	187, 884, 1327, 1436
Hpy188III	TCNNGA	3 cut(s)	73, 725, 1271
Hpy8I	GTNNAC	4 cut(s)	187, 884, 1327, 1436
Hpy99I	CGWCG	6 cut(s)	146, 179, 185, 188, 191, 308
HpyCH4III	ACNGT	8 cut(s)	13, 399, 479, 499, 1220, 1440, 1513, 1588
HpyCH4IV	ACGT	5 cut(s)	916, 984, 1618, 1634, 1708
HpyCH4V	TGCA	9 cut(s)	493, 824, 1047, 1406, 1411, 1426, 1462, 1477, 1840
HpyF10VI	GCNNNNNNNGC	3 cut(s)	230, 1120, 1865
HpySE526I	ACGT	5 cut(s)	916, 984, 1618, 1634, 1708
Hsp92I	GRCGYC	2 cut(s)	6, 189
Hsp92II	CATG	7 cut(s)	265, 331, 458, 1044, 1172, 1389, 1502
HspAI	GCGC	3 cut(s)	231, 575, 1570
KpnI	GGTACC	1 cut(s)	1566
KroI	GCCGGC	1 cut(s)	128
KroNI	GCCGGC	1 cut(s)	130
KspAI	GTTAAC	1 cut(s)	1327
Kzo9I	GATC	8 cut(s)	1009, 1093, 1273, 1284, 1361, 1464, 1629, 1714
LguI	GCTCTTC	1 cut(s)	1152
LmnI	GCTCC	5 cut(s)	63, 1002, 1162, 1725, 1837
Lsp1109I	GCAGC	6 cut(s)	94, 1177, 1344, 1461, 1852, 1852
LweI	GCATC	7 cut(s)	811, 833, 852, 941, 949, 985, 1344
MaeI	CTAG	2 cut(s)	999, 1377
MaeII	ACGT	5 cut(s)	916, 984, 1618, 1634, 1708
MaeIII	GTNAC	7 cut(s)	13, 275, 697, 980, 1505, 1513, 1582
MalI	GATC	8 cut(s)	1011, 1095, 1275, 1286, 1363, 1466, 1631, 1716
MboI	GATC	8 cut(s)	1009, 1093, 1273, 1284, 1361, 1464, 1629, 1714
MflI	RGATCY	3 cut(s)	1093, 1284, 1464
MhlI	GDGCHC	2 cut(s)	468, 1147
MluCI	AATT	6 cut(s)	556, 816, 1028, 1081, 1225, 1524
MlyI	GAGTC	4 cut(s)	107, 676, 929, 1382
MmeI	TCCRAC	3 cut(s)	41, 135, 857
Mph1103I	ATGCAT	1 cut(s)	826
MroNI	GCCGGC	1 cut(s)	128
MseI	TTAA	4 cut(s)	363, 414, 1326, 1921
MslI	CAYNNNNRTG	2 cut(s)	425, 1299
MspA1I	CMGCKG	2 cut(s)	628, 1474
MspI	CCGG	6 cut(s)	86, 129, 488, 518, 534, 1769
MspR9I	CCNGG	5 cut(s)	534, 535, 1007, 1452, 1770
Mva1269I	GAATGC	2 cut(s)	741, 1464
MvaI	CCWGG	2 cut(s)	1007, 1452
MwoI	GCNNNNNNNGC	3 cut(s)	230, 1120, 1865
NaeI	GCCGGC	1 cut(s)	130
NciI	CCSGG	3 cut(s)	534, 535, 1770
NcoI	CCATGG	1 cut(s)	327
NdeII	GATC	8 cut(s)	1009, 1093, 1273, 1284, 1361, 1464, 1629, 1714
NgoMIV	GCCGGC	1 cut(s)	128
NlaIII	CATG	7 cut(s)	265, 331, 458, 1044, 1172, 1389, 1502
NlaIV	GGNNCC	6 cut(s)	90, 333, 1004, 1449, 1564, 1833
NmuCI	GTSAC	4 cut(s)	13, 275, 980, 1513
NsbI	TGCGCA	1 cut(s)	1571
NsiI	ATGCAT	1 cut(s)	826
NspI	RCATGY	2 cut(s)	1044, 1389
PciSI	GCTCTTC	1 cut(s)	1152
PcsI	WCGNNNNNNNCGW	1 cut(s)	183
PctI	GAATGC	2 cut(s)	741, 1464
PdiI	GCCGGC	1 cut(s)	130
PfeI	GAWTC	7 cut(s)	344, 619, 659, 721, 947, 1133, 1885
PflFI	GACNNNGTC	2 cut(s)	269, 397
PflMI	CCANNNNNTGG	1 cut(s)	1550
PkrI	GCNGC	9 cut(s)	84, 127, 212, 1167, 1359, 1476, 1615, 1842, 1867
PleI	GAGTC	4 cut(s)	107, 675, 928, 1381
PpsI	GAGTC	4 cut(s)	107, 675, 928, 1381
Ppu21I	YACGTR	2 cut(s)	1619, 1709
PshAI	GACNNNNGTC	1 cut(s)	919
Psp6I	CCWGG	2 cut(s)	1005, 1450
PspFI	CCCAGC	1 cut(s)	19
PspGI	CCWGG	2 cut(s)	1005, 1450
PspN4I	GGNNCC	6 cut(s)	90, 333, 1004, 1449, 1564, 1833
PspPI	GGNCC	2 cut(s)	88, 271
PstI	CTGCAG	1 cut(s)	1428
PstNI	CAGNNNCTG	2 cut(s)	397, 477
PsuI	RGATCY	3 cut(s)	1093, 1284, 1464
PsyI	GACNNNGTC	2 cut(s)	269, 397
PvuII	CAGCTG	1 cut(s)	1474
RsaI	GTAC	4 cut(s)	883, 987, 1564, 1733
RsaNI	GTAC	4 cut(s)	882, 986, 1563, 1732
RseI	CAYNNNNRTG	2 cut(s)	425, 1299
SalI	GTCGAC	1 cut(s)	185
SapI	GCTCTTC	1 cut(s)	1152
SaqAI	TTAA	4 cut(s)	363, 414, 1326, 1921
SatI	GCNGC	9 cut(s)	83, 126, 211, 1166, 1358, 1475, 1614, 1841, 1866
Sau3AI	GATC	8 cut(s)	1009, 1093, 1273, 1284, 1361, 1464, 1629, 1714
Sau96I	GGNCC	2 cut(s)	88, 271
SchI	GAGTC	4 cut(s)	107, 676, 929, 1382
ScrFI	CCNGG	5 cut(s)	534, 535, 1007, 1452, 1770
SduI	GDGCHC	2 cut(s)	468, 1147
SfaNI	GCATC	7 cut(s)	811, 833, 852, 941, 949, 985, 1344
SfcI	CTRYAG	1 cut(s)	1424
SgrAI	CRCCGGYG	1 cut(s)	487
SgrDI	CGTCGACG	1 cut(s)	185
SinI	GGWCC	2 cut(s)	88, 271
SmaI	CCCGGG	1 cut(s)	535
SmiMI	CAYNNNNRTG	2 cut(s)	425, 1299
SmlI	CTYRAG	3 cut(s)	1109, 1288, 1668
SmoI	CTYRAG	3 cut(s)	1109, 1288, 1668
Sse9I	AATT	6 cut(s)	556, 816, 1028, 1081, 1225, 1524
SspI	AATATT	1 cut(s)	1536
SspMI	CTAG	2 cut(s)	999, 1377
StyD4I	CCNGG	5 cut(s)	532, 533, 1005, 1450, 1768
StyI	CCWWGG	3 cut(s)	162, 327, 829
TaaI	ACNGT	8 cut(s)	13, 399, 479, 499, 1220, 1440, 1513, 1588
TaiI	ACGT	5 cut(s)	919, 987, 1621, 1637, 1711
TaqI	TCGA	3 cut(s)	144, 186, 614
TasI	AATT	6 cut(s)	556, 816, 1028, 1081, 1225, 1524
TatI	WGTACW	1 cut(s)	881
TauI	GCSGC	3 cut(s)	128, 213, 1616
TfiI	GAWTC	7 cut(s)	344, 619, 659, 721, 947, 1133, 1885
Tru1I	TTAA	4 cut(s)	363, 414, 1326, 1921
Tru9I	TTAA	4 cut(s)	363, 414, 1326, 1921
TscAI	CASTG	9 cut(s)	233, 402, 466, 982, 1225, 1345, 1516, 1593, 1879
TseFI	GTSAC	4 cut(s)	13, 275, 980, 1513
TseI	GCWGC	6 cut(s)	82, 1165, 1357, 1474, 1840, 1865
Tsp45I	GTSAC	4 cut(s)	13, 275, 980, 1513
TspDTI	ATGAA	5 cut(s)	1104, 1143, 1278, 1727, 1792
TspGWI	ACGGA	2 cut(s)	238, 263
TspMI	CCCGGG	1 cut(s)	533
TspRI	CASTG	9 cut(s)	233, 402, 466, 982, 1225, 1345, 1516, 1593, 1879
Tth111I	GACNNNGTC	2 cut(s)	269, 397
Van91I	CCANNNNNTGG	1 cut(s)	1550
VpaK11BI	GGWCC	2 cut(s)	88, 271
XapI	RAATTY	2 cut(s)	1028, 1225
XceI	RCATGY	2 cut(s)	1044, 1389
XmaI	CCCGGG	1 cut(s)	533
XmiI	GTMKAC	1 cut(s)	186
XspI	CTAG	2 cut(s)	999, 1377
Zsp2I	ATGCAT	1 cut(s)	826

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.