Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0001896

Physical Location & Seq

Genomic Coordinates Reverse (-)

1438406 .. 1502857

Gene Structure 64452 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG020600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1605 bp

ATGGACGCCACCGTCACCCCAGCCCGAGTCTCCAGTTGGAGCAACATCGTGAAGAAGCAGCCGGACCCAAAGCCCCAAAACTCCTCCTCCTCAATCGCCACCACCAAAGTCTTGGTCGAAAGCTGCAAGTCCTACAAGGGCATAGCTGTCGCCGTCGTCGACGCCAATGCTATCATTCAAGGCTGCGAGACCCTCGCCCACTGCGCCGACAAGTTCGTCTCCGTCCCCGAGGTCATCAACGACGAGGTCCGTGACCCTATTTCCCGCCACCGCCTCGCCGTCCTTCCCTTCCAAGTTCACACCATGGAGCCCTCCCGTGAATCCCTCGATAAAGTTGAAAAGTTTGCGAAGGCTACTGGGGATTTCCCGTCACTGACAGAGGTTGATCGTCGTCTTATTGCTATGACTTATACACTGGAGGCTCAGATGCATGGCACTGAGCACCTCAGGGACTGTCCTCCGCCGACGGTGCATACTGTCAATGTCATGAGGTTGCCGGAGAAGGACTTGCCCGGCTGGGAAAATAACGTGCCTAATTTGGAAGAGTGGGAAACGCTGGAAAACAAAGCGGAGGAGGATAAAGGGAACTCTGGTTCGAGGATTCTTCCGTTGAAAGATATTGACTTGAATGTTGTTGATGATTTTGAGAGCCCTTCTGTTGATGGTTCTGCGGTGGAAGTTACAAGTGATGTTCATTCTGAGAATCAGGAGGGTGGTGAGGGCATTCAGGGGAGACATAGGAGGTATTTTCCGAAGAAGAAAGAGATAAAGATTGAAGGGAAGAAGATGGTTTCTGACGGAATTGATGCGTCCCAAGGACAAGTTGACGATAATGCTGGTGACTGGATGCCTGCTGTTAGTCGGAGTACACATAGAAGGTTTCTGAGAAGAAAAGCTAGACGTGAGTCTTATGAGGCATCGGCTGATAATGATCCTCAGCAAGATGCTGAGGAAAACACAAGTGGTGACCGACTTGTGGATGATGGAAGTGTTGATACATCAAATGTGAACGATGATAGTAGTGAGCAGAGCTGCATGCTGAGATCCTTGTCTGAGTCTAGTGTAGCTTGTATAACAAGTGATTTTGCAATGCAAAATGTTATTCTGCAGATGGGTTTACGGTTGTTGGCACCTGGAGGAATGCAGATCCGCCAGCTGAAGAGGTGGATTTTGAAATGCCATGCTTGTAATACTTTGACCAATGAATTTGGGAGAATGTTTTGTCCAAAGTGTGGAAACGGTGGTACCTTGTGCAAGGTAGCAGGTACAGTGGGTGAGAATGGGATTACTCTTGCGGCACGTAAGCCTCGGATCACCAAGCGTGGCACAAGATATTCACTTCCTTTACCACAAGGTGGAAGAAATGCCATTACCAAAAACCCTGTTTTACGTGAGGATCAGCTTCCACAAAAGTACCTCCATCCAAAGACAAAGAAGAAAGCAAATAAGCCGGGAGATGACGACCTACTCACTTCCAATGACTTCATTTTCATCCACCATTCGGATAAAAAGGCTCCTTTGCAGCCTCCAGTGAGGAAGGCATTAGCTGCTTTCAGCGGGAGGAGGAATCCCAATGACAATCACTATTCACATTCCAAGCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

NOB1_Zn_bind PIN_6

Protein Analysis

534

Amino Acids

59.19

Weight (kDa)

6.97

Isoelectric Point (pI)

51.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PIN_6	PF17146	52 - 139	4.4e-22	PIN domain of ribonuclease
Zn_ribbon_NOB1	PF08772	383 - 453	1.9e-21	Nin one binding (NOB1) Zn-ribbon like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001896)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G41190
fragaria_vesca	FvH4_5g23090
malus_domestica	MD14G1101800.v1.1
prunus_persica	Prupe.5G097400_v2.0.a1
pyrus_communis	pycom06g07650 pycom14g09860
rosa_chinensis	RchiOBHm_Chr2g0099081 RchiOBHm_Chr7g0179141 RchiOBHm_Chr7g0211871 RchiOBHm_Chr7g0211921 RchiOBHm_Chr7g0211961
rosa_laevigata	RLG00000002953 RLG00000002956 RLG00000005381 RLG00000016846 RLG00000021575
rosa_multiflora	Rmu_sc0000888.1_g000019 Rmu_sc0009005.1_g000003 Rmu_sc0017524.1_g000001 Rmu_sc0018807.1_g000007 Rmu_sc0022966.1_g000001
rosa_roxburghii	Rroxscaffold_2G00143460 Rroxscaffold_3G00247290 Rroxscaffold_3G00247320 Rroxscaffold_3G00274270 Rroxscaffold_3G00274340
rosa_rugosa	Rorug02G0076500 Rorug06G0421300 Rorug07G0129500 Rorug07G0129600
rosa_samantha	Rh2AG125600 Rh2BG128900 Rh2CG129900 Rh2DG130300 Rh7AG020500 Rh7AG262400 Rh7BG020600 Rh7BG255900 Rh7CG021700 Rh7CG278400 Rh7DG021100 Rh7DG268900 Rh7DG269200
rosa_wichuraiana	Rw7G001720 Rw7G022370 Rw7G022390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	11, 215
Acc36I	ACCTGC	1 cut(s)	1253
Acc65I	GGTACC	1 cut(s)	1244
AccB1I	GGYRCC	2 cut(s)	1129, 1244
AccB7I	CCANNNNNTGG	2 cut(s)	1232, 1355
AccI	GTMKAC	1 cut(s)	159
AciI	CCGC	8 cut(s)	265, 271, 461, 569, 671, 1150, 1295, 1557
AclWI	GGATC	5 cut(s)	926, 1038, 1141, 1319, 1404
AcsI	RAATTY	1 cut(s)	1205
AcuI	CTGAAG	1 cut(s)	1178
AcyI	GRCGYC	2 cut(s)	6, 162
AdeI	CACNNNGTG	1 cut(s)	1355
AfaI	GTAC	4 cut(s)	868, 1246, 1267, 1415
AfiI	CCNNNNNNNGG	4 cut(s)	976, 1232, 1355, 1501
AgsI	TTSAA	6 cut(s)	179, 338, 613, 628, 776, 1174
AjiI	CACGTC	1 cut(s)	902
AjnI	CCWGG	1 cut(s)	1132
AloI	GAACNNNNNNTCC	2 cut(s)	577, 609
AluBI	AGCT	8 cut(s)	123, 146, 896, 1032, 1067, 1156, 1402, 1547
AluI	AGCT	8 cut(s)	123, 146, 896, 1032, 1067, 1156, 1402, 1547
Alw21I	GWGCWC	1 cut(s)	444
Alw26I	GTCTC	4 cut(s)	34, 182, 223, 727
AlwI	GGATC	5 cut(s)	926, 1038, 1141, 1319, 1404
AlwNI	CAGNNNCTG	1 cut(s)	453
Ama87I	CYCGRG	2 cut(s)	24, 227
ApeKI	GCWGC	6 cut(s)	58, 123, 183, 1032, 1522, 1547
ApoI	RAATTY	1 cut(s)	1205
ArsI	GACNNNNNNTTYG	2 cut(s)	99, 131
Asp718I	GGTACC	1 cut(s)	1244
AspLEI	GCGC	1 cut(s)	206
AspS9I	GGNCC	2 cut(s)	64, 247
AsuC2I	CCSGG	2 cut(s)	513, 1452
AsuHPI	GGTGA	6 cut(s)	7, 728, 851, 977, 1286, 1306
AvaI	CYCGRG	2 cut(s)	24, 227
AvaII	GGWCC	2 cut(s)	64, 247
AxyI	CCTNAGG	1 cut(s)	446
BaeI	ACNNNNGTAYC	4 cut(s)	1228, 1261, 1397, 1430
BanI	GGYRCC	2 cut(s)	1129, 1244
BanII	GRGCYC	2 cut(s)	312, 653
BarI	GAAGNNNNNNTAC	2 cut(s)	979, 1011
Bbv12I	GWGCWC	1 cut(s)	444
BbvCI	CCTCAGC	2 cut(s)	936, 948
BbvI	GCAGC	6 cut(s)	70, 110, 170, 1019, 1534, 1534
BccI	CCATC	5 cut(s)	656, 781, 977, 1105, 1428
BceAI	ACGGC	2 cut(s)	137, 263
BcgI	CGANNNNNNTGC	4 cut(s)	130, 149, 164, 183
BciT130I	CCWGG	1 cut(s)	1134
BcnI	CCSGG	2 cut(s)	513, 1452
BcoDI	GTCTC	4 cut(s)	34, 182, 223, 727
BfaI	CTAG	2 cut(s)	897, 1059
BfmI	CTRYAG	1 cut(s)	1106
BfuAI	ACCTGC	1 cut(s)	1253
BisI	GCNGC	7 cut(s)	59, 124, 184, 1033, 1296, 1523, 1548
BlsI	GCNGC	7 cut(s)	60, 125, 185, 1034, 1297, 1524, 1549
Bme1390I	CCNGG	3 cut(s)	513, 1134, 1452
Bme18I	GGWCC	2 cut(s)	64, 247
BmeT110I	CYCGRG	2 cut(s)	24, 227
BmgBI	CACGTC	1 cut(s)	902
BmgT120I	GGNCC	2 cut(s)	64, 247
BmiI	GGNNCC	5 cut(s)	66, 309, 1131, 1246, 1515
BmrFI	CCNGG	3 cut(s)	513, 1134, 1452
BmrI	ACTGGG	1 cut(s)	366
BmsI	GCATC	5 cut(s)	417, 796, 837, 926, 934
BmuI	ACTGGG	1 cut(s)	366
BoxI	GACNNNNGTC	1 cut(s)	904
BpmI	CTGGAG	4 cut(s)	16, 437, 1155, 1512
Bpu10I	CCTNAGC	2 cut(s)	936, 948
BpuMI	CCSGG	2 cut(s)	513, 1452
BsaAI	YACGTR	2 cut(s)	1301, 1391
BsaBI	GATNNNNATC	1 cut(s)	930
BsaHI	GRCGYC	2 cut(s)	6, 162
BsaI	GGTCTC	1 cut(s)	182
BsaJI	CCNNGG	4 cut(s)	228, 303, 814, 1307
BsaXI	ACNNNNNCTCC	2 cut(s)	71, 101
Bsc4I	CCNNNNNNNGG	4 cut(s)	976, 1232, 1355, 1501
Bse1I	ACTGG	5 cut(s)	33, 361, 420, 848, 1529
Bse21I	CCTNAGG	1 cut(s)	446
Bse3DI	GCAATG	1 cut(s)	1095
Bse8I	GATNNNNATC	1 cut(s)	930
BseBI	CCWGG	1 cut(s)	1134
BseDI	CCNNGG	4 cut(s)	228, 303, 814, 1307
BseGI	GGATG	4 cut(s)	852, 985, 1420, 1491
BseJI	GATNNNNATC	1 cut(s)	930
BseLI	CCNNNNNNNGG	4 cut(s)	976, 1232, 1355, 1501
BseMI	GCAATG	1 cut(s)	1095
BseMII	CTCAG	9 cut(s)	429, 437, 460, 690, 875, 939, 950, 1031, 1044
BseNI	ACTGG	5 cut(s)	33, 361, 420, 848, 1529
BseRI	GAGGAG	5 cut(s)	73, 76, 79, 587, 1576
BseXI	GCAGC	6 cut(s)	70, 110, 170, 1019, 1534, 1534
BseYI	CCCAGC	2 cut(s)	19, 516
BshNI	GGYRCC	2 cut(s)	1129, 1244
BsiHKAI	GWGCWC	1 cut(s)	444
BsiHKCI	CYCGRG	2 cut(s)	24, 227
BsiSI	CCGG	4 cut(s)	62, 497, 513, 1451
BslFI	GGGAC	3 cut(s)	209, 464, 796
BslI	CCNNNNNNNGG	4 cut(s)	976, 1232, 1355, 1501
BsmAI	GTCTC	4 cut(s)	34, 182, 223, 727
BsmBI	CGTCTC	1 cut(s)	223
BsmFI	GGGAC	3 cut(s)	209, 464, 796
BsmI	GAATGC	2 cut(s)	723, 1146
Bso31I	GGTCTC	1 cut(s)	182
BsoBI	CYCGRG	2 cut(s)	24, 227
Bsp1286I	GDGCHC	3 cut(s)	312, 444, 653
Bsp143I	GATC	6 cut(s)	385, 931, 1043, 1146, 1311, 1396
Bsp19I	CCATGG	1 cut(s)	303
BspACI	CCGC	8 cut(s)	265, 271, 461, 569, 671, 1150, 1295, 1557
BspCNI	CTCAG	9 cut(s)	430, 436, 459, 691, 876, 940, 949, 1032, 1045
BspHI	TCATGA	1 cut(s)	486
BspLI	GGNNCC	5 cut(s)	66, 309, 1131, 1246, 1515
BspMAI	CTGCAG	1 cut(s)	1110
BspMI	ACCTGC	1 cut(s)	1253
BspPI	GGATC	5 cut(s)	926, 1038, 1141, 1319, 1404
BspT107I	GGYRCC	2 cut(s)	1129, 1244
BspTNI	GGTCTC	1 cut(s)	182
BsrDI	GCAATG	1 cut(s)	1095
BsrI	ACTGG	5 cut(s)	33, 361, 420, 848, 1529
BssECI	CCNNGG	4 cut(s)	228, 303, 814, 1307
BssMI	GATC	6 cut(s)	385, 931, 1043, 1146, 1311, 1396
BssNI	GRCGYC	2 cut(s)	6, 162
BssT1I	CCWWGG	2 cut(s)	303, 814
Bst2UI	CCWGG	1 cut(s)	1134
Bst4CI	ACNGT	7 cut(s)	13, 455, 469, 478, 1122, 1241, 1270
Bst6I	CTCTTC	2 cut(s)	537, 1154
BstACI	GRCGYC	2 cut(s)	6, 162
BstAPI	GCANNNNNTGC	1 cut(s)	1547
BstBAI	YACGTR	2 cut(s)	1301, 1391
BstC8I	GCNNGC	3 cut(s)	852, 1037, 1154
BstDEI	CTNAG	9 cut(s)	423, 438, 446, 699, 884, 936, 948, 1040, 1053
BstDSI	CCRYGG	1 cut(s)	303
BstEII	GGTNACC	1 cut(s)	965
BstF5I	GGATG	4 cut(s)	852, 985, 1420, 1491
BstHHI	GCGC	1 cut(s)	206
BstKTI	GATC	6 cut(s)	388, 934, 1046, 1149, 1314, 1399
BstMAI	GTCTC	4 cut(s)	34, 182, 223, 727
BstMBI	GATC	6 cut(s)	385, 931, 1043, 1146, 1311, 1396
BstMWI	GCNNNNNNNGC	3 cut(s)	203, 469, 1547
BstNI	CCWGG	1 cut(s)	1134
BstNSI	RCATGY	1 cut(s)	1039
BstPAI	GACNNNNGTC	1 cut(s)	904
BstPI	GGTNACC	1 cut(s)	965
BstSCI	CCNGG	3 cut(s)	511, 1132, 1450
BstSFI	CTRYAG	1 cut(s)	1106
BstV1I	GCAGC	6 cut(s)	70, 110, 170, 1019, 1534, 1534
BstX2I	RGATCY	2 cut(s)	1043, 1146
BstXI	CCANNNNNNTGG	1 cut(s)	112
BstYI	RGATCY	2 cut(s)	1043, 1146
Bsu36I	CCTNAGG	1 cut(s)	446
BtgI	CCRYGG	1 cut(s)	303
BtrI	CACGTC	1 cut(s)	902
BtsCI	GGATG	4 cut(s)	852, 985, 1420, 1491
BtsI	GCAGTG	1 cut(s)	199
BtsIMutI	CAGTG	6 cut(s)	199, 371, 413, 435, 1275, 1536
BveI	ACCTGC	1 cut(s)	1253
Cac8I	GCNNGC	3 cut(s)	852, 1037, 1154
CaiI	CAGNNNCTG	1 cut(s)	453
CciI	TCATGA	1 cut(s)	486
CfoI	GCGC	1 cut(s)	206
Cfr13I	GGNCC	2 cut(s)	64, 247
CseI	GACGC	3 cut(s)	14, 170, 798
Csp6I	GTAC	4 cut(s)	867, 1245, 1266, 1414
CviAII	CATG	5 cut(s)	304, 431, 487, 1036, 1181
CviQI	GTAC	4 cut(s)	867, 1245, 1266, 1414
DdeI	CTNAG	9 cut(s)	423, 438, 446, 699, 884, 936, 948, 1040, 1053
DpnI	GATC	6 cut(s)	387, 933, 1045, 1148, 1313, 1398
DpnII	GATC	6 cut(s)	385, 931, 1043, 1146, 1311, 1396
DraIII	CACNNNGTG	1 cut(s)	1355
DrdI	GACNNNNNNGTC	2 cut(s)	11, 215
DseDI	GACNNNNNNGTC	2 cut(s)	11, 215
Eam1104I	CTCTTC	2 cut(s)	537, 1154
EarI	CTCTTC	2 cut(s)	537, 1154
EciI	GGCGGA	2 cut(s)	450, 1139
Eco130I	CCWWGG	2 cut(s)	303, 814
Eco24I	GRGCYC	2 cut(s)	312, 653
Eco31I	GGTCTC	1 cut(s)	182
Eco47I	GGWCC	2 cut(s)	64, 247
Eco57I	CTGAAG	1 cut(s)	1178
Eco81I	CCTNAGG	1 cut(s)	446
Eco88I	CYCGRG	2 cut(s)	24, 227
Eco91I	GGTNACC	1 cut(s)	965
EcoO65I	GGTNACC	1 cut(s)	965
EcoRII	CCWGG	1 cut(s)	1132
EcoT14I	CCWWGG	2 cut(s)	303, 814
EcoT22I	ATGCAT	1 cut(s)	432
EcoT38I	GRGCYC	2 cut(s)	312, 653
ErhI	CCWWGG	2 cut(s)	303, 814
Esp3I	CGTCTC	1 cut(s)	223
FaeI	CATG	5 cut(s)	307, 434, 490, 1039, 1184
FaqI	GGGAC	3 cut(s)	209, 464, 796
FatI	CATG	5 cut(s)	303, 430, 486, 1035, 1180
FauI	CCCGC	2 cut(s)	272, 1550
FblI	GTMKAC	1 cut(s)	159
Fnu4HI	GCNGC	7 cut(s)	59, 124, 184, 1033, 1296, 1523, 1548
FokI	GGATG	4 cut(s)	859, 992, 1407, 1478
FriOI	GRGCYC	2 cut(s)	312, 653
Fsp4HI	GCNGC	7 cut(s)	59, 124, 184, 1033, 1296, 1523, 1548
FspBI	CTAG	2 cut(s)	897, 1059
GlaI	GCGC	1 cut(s)	205
GluI	GCNGC	7 cut(s)	59, 124, 184, 1033, 1296, 1523, 1548
GsaI	CCCAGC	2 cut(s)	23, 520
GsuI	CTGGAG	4 cut(s)	16, 437, 1155, 1512
HapII	CCGG	4 cut(s)	62, 497, 513, 1451
HgaI	GACGC	3 cut(s)	14, 170, 798
HhaI	GCGC	1 cut(s)	206
Hin1I	GRCGYC	2 cut(s)	6, 162
Hin1II	CATG	5 cut(s)	307, 434, 490, 1039, 1184
Hin6I	GCGC	1 cut(s)	204
HinP1I	GCGC	1 cut(s)	204
HincII	GTYRAC	2 cut(s)	160, 826
HindII	GTYRAC	2 cut(s)	160, 826
HinfI	GANTC	7 cut(s)	27, 320, 601, 703, 905, 1055, 1567
HpaII	CCGG	4 cut(s)	62, 497, 513, 1451
HphI	GGTGA	6 cut(s)	7, 728, 851, 977, 1286, 1306
Hpy166II	GTNNAC	6 cut(s)	160, 298, 826, 869, 1009, 1118
Hpy188I	TCNGA	9 cut(s)	426, 700, 753, 796, 864, 885, 1054, 1311, 1504
Hpy188III	TCNNGA	3 cut(s)	49, 487, 707
Hpy8I	GTNNAC	6 cut(s)	160, 298, 826, 869, 1009, 1118
Hpy99I	CGWCG	6 cut(s)	158, 161, 164, 245, 393, 469
HpyAV	CCTTC	8 cut(s)	293, 298, 343, 496, 663, 770, 870, 1531
HpyCH4III	ACNGT	7 cut(s)	13, 455, 469, 478, 1122, 1241, 1270
HpyCH4IV	ACGT	4 cut(s)	528, 901, 1300, 1390
HpyF10VI	GCNNNNNNNGC	3 cut(s)	203, 469, 1547
HpyF3I	CTNAG	9 cut(s)	423, 438, 446, 699, 884, 936, 948, 1040, 1053
HpySE526I	ACGT	4 cut(s)	528, 901, 1300, 1390
Hsp92I	GRCGYC	2 cut(s)	6, 162
Hsp92II	CATG	5 cut(s)	307, 434, 490, 1039, 1184
HspAI	GCGC	1 cut(s)	204
KpnI	GGTACC	1 cut(s)	1248
Kzo9I	GATC	6 cut(s)	385, 931, 1043, 1146, 1311, 1396
LmnI	GCTCC	3 cut(s)	39, 307, 1519
Lsp1109I	GCAGC	6 cut(s)	70, 110, 170, 1019, 1534, 1534
LweI	GCATC	5 cut(s)	417, 796, 837, 926, 934
MaeI	CTAG	2 cut(s)	897, 1059
MaeII	ACGT	4 cut(s)	528, 901, 1300, 1390
MaeIII	GTNAC	6 cut(s)	13, 251, 369, 679, 839, 965
MalI	GATC	6 cut(s)	387, 933, 1045, 1148, 1313, 1398
MboI	GATC	6 cut(s)	385, 931, 1043, 1146, 1311, 1396
MflI	RGATCY	2 cut(s)	1043, 1146
MhlI	GDGCHC	3 cut(s)	312, 444, 653
MluCI	AATT	3 cut(s)	535, 801, 1205
MlyI	GAGTC	3 cut(s)	36, 914, 1064
MmeI	TCCRAC	2 cut(s)	17, 842
Mph1103I	ATGCAT	1 cut(s)	432
MspA1I	CMGCKG	2 cut(s)	1156, 1557
MspI	CCGG	4 cut(s)	62, 497, 513, 1451
MspR9I	CCNGG	3 cut(s)	513, 1134, 1452
Mva1269I	GAATGC	2 cut(s)	723, 1146
MvaI	CCWGG	1 cut(s)	1134
MwoI	GCNNNNNNNGC	3 cut(s)	203, 469, 1547
NciI	CCSGG	2 cut(s)	513, 1452
NcoI	CCATGG	1 cut(s)	303
NdeII	GATC	6 cut(s)	385, 931, 1043, 1146, 1311, 1396
NlaIII	CATG	5 cut(s)	307, 434, 490, 1039, 1184
NlaIV	GGNNCC	5 cut(s)	66, 309, 1131, 1246, 1515
NmuCI	GTSAC	5 cut(s)	13, 251, 369, 839, 965
NsiI	ATGCAT	1 cut(s)	432
NspI	RCATGY	1 cut(s)	1039
PaeI	GCATGC	1 cut(s)	1039
PagI	TCATGA	1 cut(s)	486
PcsI	WCGNNNNNNNCGW	1 cut(s)	156
PctI	GAATGC	2 cut(s)	723, 1146
PfeI	GAWTC	4 cut(s)	320, 601, 703, 1567
PflFI	GACNNNGTC	1 cut(s)	245
PflMI	CCANNNNNTGG	2 cut(s)	1232, 1355
PkrI	GCNGC	7 cut(s)	60, 125, 185, 1034, 1297, 1524, 1549
PleI	GAGTC	3 cut(s)	35, 913, 1063
PpsI	GAGTC	3 cut(s)	35, 913, 1063
Ppu21I	YACGTR	2 cut(s)	1301, 1391
PshAI	GACNNNNGTC	1 cut(s)	904
Psp6I	CCWGG	1 cut(s)	1132
PspEI	GGTNACC	1 cut(s)	965
PspFI	CCCAGC	2 cut(s)	19, 516
PspGI	CCWGG	1 cut(s)	1132
PspN4I	GGNNCC	5 cut(s)	66, 309, 1131, 1246, 1515
PspPI	GGNCC	2 cut(s)	64, 247
PstI	CTGCAG	1 cut(s)	1110
PstNI	CAGNNNCTG	1 cut(s)	453
PsuI	RGATCY	2 cut(s)	1043, 1146
PsyI	GACNNNGTC	1 cut(s)	245
PvuII	CAGCTG	1 cut(s)	1156
RsaI	GTAC	4 cut(s)	868, 1246, 1267, 1415
RsaNI	GTAC	4 cut(s)	867, 1245, 1266, 1414
SalI	GTCGAC	1 cut(s)	158
SatI	GCNGC	7 cut(s)	59, 124, 184, 1033, 1296, 1523, 1548
Sau3AI	GATC	6 cut(s)	385, 931, 1043, 1146, 1311, 1396
Sau96I	GGNCC	2 cut(s)	64, 247
SchI	GAGTC	3 cut(s)	36, 914, 1064
ScrFI	CCNGG	3 cut(s)	513, 1134, 1452
SduI	GDGCHC	3 cut(s)	312, 444, 653
SfaNI	GCATC	5 cut(s)	417, 796, 837, 926, 934
SfcI	CTRYAG	1 cut(s)	1106
SgrDI	CGTCGACG	1 cut(s)	158
SinI	GGWCC	2 cut(s)	64, 247
SphI	GCATGC	1 cut(s)	1039
Sse9I	AATT	3 cut(s)	535, 801, 1205
SsiI	CCGC	8 cut(s)	265, 271, 461, 569, 671, 1150, 1295, 1557
SspMI	CTAG	2 cut(s)	897, 1059
StyD4I	CCNGG	3 cut(s)	511, 1132, 1450
StyI	CCWWGG	2 cut(s)	303, 814
TaaI	ACNGT	7 cut(s)	13, 455, 469, 478, 1122, 1241, 1270
TaiI	ACGT	4 cut(s)	531, 904, 1303, 1393
TaqI	TCGA	4 cut(s)	117, 159, 327, 596
TaqII	GACCGA	1 cut(s)	984
TasI	AATT	3 cut(s)	535, 801, 1205
TatI	WGTACW	1 cut(s)	866
TauI	GCSGC	1 cut(s)	1298
TfiI	GAWTC	4 cut(s)	320, 601, 703, 1567
TscAI	CASTG	6 cut(s)	206, 378, 420, 442, 1275, 1536
TseFI	GTSAC	5 cut(s)	13, 251, 369, 839, 965
TseI	GCWGC	6 cut(s)	58, 123, 183, 1032, 1522, 1547
Tsp45I	GTSAC	5 cut(s)	13, 251, 369, 839, 965
TspDTI	ATGAA	4 cut(s)	683, 1218, 1474, 1480
TspGWI	ACGGA	4 cut(s)	211, 239, 597, 813
TspRI	CASTG	6 cut(s)	206, 378, 420, 442, 1275, 1536
Tth111I	GACNNNGTC	1 cut(s)	245
Van91I	CCANNNNNTGG	2 cut(s)	1232, 1355
VpaK11BI	GGWCC	2 cut(s)	64, 247
XapI	RAATTY	1 cut(s)	1205
XceI	RCATGY	1 cut(s)	1039
XcmI	CCANNNNNNNNNTGG	1 cut(s)	109
XmiI	GTMKAC	1 cut(s)	159
XspI	CTAG	2 cut(s)	897, 1059
Zsp2I	ATGCAT	1 cut(s)	432

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.