Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0001896

Physical Location & Seq

Genomic Coordinates Reverse (-)

26313728 .. 26316720

Gene Structure 2993 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G022370.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1923 bp

ATGGACGCAACCGTCACCCCAGCCCCAATCCCCGACCCGAACCCAGCTGTCTCCTGTTGGAGCAACATCGTGAAGAAGCAGCCGGACTCAAAGCCCCAAAACTCCTCCGACTCCTCCTCAATCGCCGCCGGCGAAGTATTCGTCGAAAGCTGCAAATCCTCCAAGGGCATAGCCGTCGCCGTCGTCGACGCCAATGCTATCATTCAAGGCGGCGAGACCCTCGCCCACTGCGCCGACAAGTTCGTCTCCGTCCCAGAGGTCATGGACGAGGTCCGTGACCCTGTTTCCCGCCACCGCCTCGCCGTCGTTCCCTTCCAAGTCCAGACCATGGAACCCTCCCCTGAATCCCTCAATAAAGTTGTTAAGTTTGCGAGGGCTACTGGGGATTTACAGACACTGTCAGATGTGGATGTTAAGCTCATTGCTATGACTTATACATTGGAGGCTCAGATACATGGCACTGAGCACCTCAGGGACTGTCCCCCGCCGGTGCATACTGTCAATGTGAGGAGGTTGCCGGAGAAGGACCTGCCCGGGTGGGGAAATAATGTGCCAAATTTGGAAGAGTGGGAAGCGCTGGAGAACGAAGCGGAGGATAAGTTGAACCCCAGTTCGAGGATTCTTCCGCTGAAAGATATAAACTTGAATGTTATTGAGGATTCTGAGAGTCGTTCTGTTGATGGTTCTGCGGTGGAAGTTACGAGTGATGTTTGTTCTGAGAATCAGGAGGGTGGTGAGGGCATTCAGGGGAGACATAGGAGATATTTTCCAAAGAAGAAAGAGATAAAGATTGAAGGGAAGATGGTTTCGGATGGAATTGATGCATCCCAAGGACAGGCTGATGATAATGCGGGTGATTGGATGCCTGCCGTGAGTCGGAGTACACATAGAAGGTTTTTGAGAAGAAAAGCTAGACGTGAGTCTTATGAGGCATCGGCTGATAATGATTCTCAGCAAGATGCTGAGGAAAACACCAGTGGTGACGTACTTGTAGATGCTAGGAGCCAGGATCAAACATCGCCTTCTAAATTTGAAGAGGCATGTTGCAGACCTGTGGAGAGGGAGATGACAGAAGAGAAGAATTGTGATGAAGATCTTTCCTCAATCCTTGAGCAAACAAGGCGTGATGAAGATTCACTAAGGGCTCTTCAAAAAGGGAAGGAGCAGCATGGGGTTGAGGATAATGATTTCAAAGCAGGGGAAAGCACTTCTGATAACGGTGTGAATTTTGCTGTTGAGGGAGATGAGGTTGAAGTGATAAATGAAGGTCTGGATCACTTGGAGATCTCAAGTCATAATGATGGTAGTGTTGATACATCAAATGTTAACGATGATAGCAGTGAGCAGAGCTGGATGCTGCGATCCTTGTCTGAGTCTAGTGTAGCATGTATAACAAGTGATTTTGCAATGCAAAATGTTATTCTGCAGATGGGTTTACGGTTGTTGGCACCAGGAGGAATGCAGATCCGCCAGCTGCACAGGTGGATTTTGAAATGCCATGCTTGTAACACTGTGACTGCTGAAATTGGGAGAATATTTTGTCCAAAGTGTGGAAATGGTGGTACCTTGCGCAAGGTAGCAGTTACAGTGGGTGAGAATGGGATTATTCTTGCGGCACGTAAGCCTCGGATCATGTTGCGTGGCACAAGATTTTCACTTCCTTTACCTCAAGGTGGAAGAAATGCCATTACTAAGAACCCTGTTTTACGTGAAGATCAGCTCCCACAAAAGTACCTTCATCCAAAGACAAAAAAGAAAGCAAATAAGCCGGGAGATGACGACCTATTCACTTCCAATGACTTCATCTTCCGCCACCATTCTGATAAAAAGGCTCCTTTGCAGCCTCCTGTAAGGAAGGCATTAGCTGCTTTCAGTGGAAGGAGGAATCCCAACGACAATCATTATTCACATTCCAAGCATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

NOB1_Zn_bind PIN_6

Protein Analysis

640

Amino Acids

70.61

Weight (kDa)

5.42

Isoelectric Point (pI)

58.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PIN_6	PF17146	61 - 147	5.2e-26	PIN domain of ribonuclease
Zn_ribbon_NOB1	PF08772	489 - 559	1.3e-21	Nin one binding (NOB1) Zn-ribbon like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001896)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G41190
fragaria_vesca	FvH4_5g23090
malus_domestica	MD14G1101800.v1.1
prunus_persica	Prupe.5G097400_v2.0.a1
pyrus_communis	pycom06g07650 pycom14g09860
rosa_chinensis	RchiOBHm_Chr2g0099081 RchiOBHm_Chr7g0179141 RchiOBHm_Chr7g0211871 RchiOBHm_Chr7g0211921 RchiOBHm_Chr7g0211961
rosa_laevigata	RLG00000002953 RLG00000002956 RLG00000005381 RLG00000016846 RLG00000021575
rosa_multiflora	Rmu_sc0000888.1_g000019 Rmu_sc0009005.1_g000003 Rmu_sc0017524.1_g000001 Rmu_sc0018807.1_g000007 Rmu_sc0022966.1_g000001
rosa_roxburghii	Rroxscaffold_2G00143460 Rroxscaffold_3G00247290 Rroxscaffold_3G00247320 Rroxscaffold_3G00274270 Rroxscaffold_3G00274340
rosa_rugosa	Rorug02G0076500 Rorug06G0421300 Rorug07G0129500 Rorug07G0129600
rosa_samantha	Rh2AG125600 Rh2BG128900 Rh2CG129900 Rh2DG130300 Rh7AG020500 Rh7AG262400 Rh7BG020600 Rh7BG255900 Rh7CG021700 Rh7CG278400 Rh7DG021100 Rh7DG268900 Rh7DG269200
rosa_wichuraiana	Rw7G001720 Rw7G022370 Rw7G022390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	11, 242
Acc16I	TGCGCA	1 cut(s)	1571
Acc36I	ACCTGC	1 cut(s)	537
Acc65I	GGTACC	1 cut(s)	1562
AccB1I	GGYRCC	2 cut(s)	1447, 1562
AccB7I	CCANNNNNTGG	2 cut(s)	328, 1550
AccI	GTMKAC	1 cut(s)	186
AclWI	GGATC	5 cut(s)	1017, 1281, 1356, 1459, 1637
AcsI	RAATTY	3 cut(s)	556, 1028, 1225
AcyI	GRCGYC	1 cut(s)	189
AfaI	GTAC	4 cut(s)	883, 987, 1564, 1733
AfeI	AGCGCT	1 cut(s)	576
AfiI	CCNNNNNNNGG	7 cut(s)	328, 539, 615, 835, 876, 1550, 1673
AgsI	TTSAA	9 cut(s)	206, 604, 646, 794, 1034, 1151, 1192, 1253, 1492
AjiI	CACGTC	1 cut(s)	917
AjnI	CCWGG	2 cut(s)	1005, 1450
AluBI	AGCT	8 cut(s)	47, 150, 418, 911, 1350, 1474, 1720, 1865
AluI	AGCT	8 cut(s)	47, 150, 418, 911, 1350, 1474, 1720, 1865
Alw21I	GWGCWC	1 cut(s)	468
Alw26I	GTCTC	4 cut(s)	55, 209, 250, 745
AlwI	GGATC	5 cut(s)	1017, 1281, 1356, 1459, 1637
AlwNI	CAGNNNCTG	2 cut(s)	397, 477
Ama87I	CYCGRG	1 cut(s)	533
Aor51HI	AGCGCT	1 cut(s)	576
ApeKI	GCWGC	7 cut(s)	79, 150, 1165, 1357, 1474, 1840, 1865
ApoI	RAATTY	3 cut(s)	556, 1028, 1225
ArsI	GACNNNNNNTTYG	2 cut(s)	126, 158
Asp718I	GGTACC	1 cut(s)	1562
AspLEI	GCGC	3 cut(s)	233, 577, 1572
AspS9I	GGNCC	2 cut(s)	271, 526
AsuC2I	CCSGG	3 cut(s)	534, 535, 1770
AsuHPI	GGTGA	5 cut(s)	7, 746, 866, 992, 1604
AvaI	CYCGRG	1 cut(s)	533
AvaII	GGWCC	2 cut(s)	271, 526
AxyI	CCTNAGG	1 cut(s)	470
BaeI	ACNNNNGTAYC	2 cut(s)	1715, 1748
BanI	GGYRCC	2 cut(s)	1447, 1562
BanII	GRGCYC	1 cut(s)	1147
Bbv12I	GWGCWC	1 cut(s)	468
BbvCI	CCTCAGC	1 cut(s)	963
BbvI	GCAGC	7 cut(s)	91, 137, 1177, 1344, 1461, 1852, 1852
BccI	CCATC	5 cut(s)	674, 796, 806, 1295, 1423
BceAI	ACGGC	4 cut(s)	158, 164, 287, 854
BcgI	CGANNNNNNTGC	4 cut(s)	157, 176, 191, 210
BciT130I	CCWGG	2 cut(s)	1007, 1452
BcnI	CCSGG	3 cut(s)	534, 535, 1770
BcoDI	GTCTC	4 cut(s)	55, 209, 250, 745
BfaI	CTAG	3 cut(s)	912, 999, 1377
BfmI	CTRYAG	1 cut(s)	1424
BfoI	RGCGCY	1 cut(s)	578
BfuAI	ACCTGC	1 cut(s)	537
BglII	AGATCT	2 cut(s)	1093, 1284
Bme1390I	CCNGG	5 cut(s)	534, 535, 1007, 1452, 1770
Bme18I	GGWCC	2 cut(s)	271, 526
BmeT110I	CYCGRG	1 cut(s)	533
BmgBI	CACGTC	1 cut(s)	917
BmgT120I	GGNCC	2 cut(s)	271, 526
BmiI	GGNNCC	5 cut(s)	333, 1004, 1449, 1564, 1833
BmrFI	CCNGG	5 cut(s)	534, 535, 1007, 1452, 1770
BmrI	ACTGGG	2 cut(s)	390, 603
BmsI	GCATC	7 cut(s)	811, 833, 852, 941, 949, 985, 1344
BmuI	ACTGGG	2 cut(s)	390, 603
BoxI	GACNNNNGTC	1 cut(s)	919
BpmI	CTGGAG	1 cut(s)	599
Bpu10I	CCTNAGC	1 cut(s)	963
BpuEI	CTTGAG	3 cut(s)	1130, 1273, 1653
BpuMI	CCSGG	3 cut(s)	534, 535, 1770
BsaAI	YACGTR	2 cut(s)	1619, 1709
BsaBI	GATNNNNATC	1 cut(s)	1092
BsaHI	GRCGYC	1 cut(s)	189
BsaI	GGTCTC	1 cut(s)	209
BsaJI	CCNNGG	5 cut(s)	162, 327, 533, 829, 1625
BsaXI	ACNNNNNCTCC	4 cut(s)	584, 614, 1233, 1263
Bsc4I	CCNNNNNNNGG	7 cut(s)	328, 539, 615, 835, 876, 1550, 1673
Bse118I	RCCGGY	2 cut(s)	128, 487
Bse1I	ACTGG	3 cut(s)	385, 609, 975
Bse21I	CCTNAGG	1 cut(s)	470
Bse3DI	GCAATG	2 cut(s)	420, 1413
Bse8I	GATNNNNATC	1 cut(s)	1092
BseBI	CCWGG	2 cut(s)	1007, 1452
BseDI	CCNNGG	5 cut(s)	162, 327, 533, 829, 1625
BseGI	GGATG	6 cut(s)	415, 817, 824, 867, 1359, 1738
BseJI	GATNNNNATC	1 cut(s)	1092
BseLI	CCNNNNNNNGG	7 cut(s)	328, 539, 615, 835, 876, 1550, 1673
BseMI	GCAATG	2 cut(s)	420, 1413
BseMII	CTCAG	8 cut(s)	453, 461, 484, 654, 708, 954, 965, 1362
BseNI	ACTGG	3 cut(s)	385, 609, 975
BseRI	GAGGAG	4 cut(s)	94, 103, 106, 523
BseXI	GCAGC	7 cut(s)	91, 137, 1177, 1344, 1461, 1852, 1852
BseYI	CCCAGC	2 cut(s)	19, 43
BsgI	GTGCAG	1 cut(s)	1460
BshNI	GGYRCC	2 cut(s)	1447, 1562
BsiHKAI	GWGCWC	1 cut(s)	468
BsiHKCI	CYCGRG	1 cut(s)	533
BsiSI	CCGG	6 cut(s)	83, 129, 488, 518, 534, 1769
BslFI	GGGAC	3 cut(s)	236, 465, 488
BslI	CCNNNNNNNGG	7 cut(s)	328, 539, 615, 835, 876, 1550, 1673
BsmAI	GTCTC	4 cut(s)	55, 209, 250, 745
BsmBI	CGTCTC	1 cut(s)	250
BsmFI	GGGAC	3 cut(s)	236, 465, 488
BsmI	GAATGC	2 cut(s)	741, 1464
Bso31I	GGTCTC	1 cut(s)	209
BsoBI	CYCGRG	1 cut(s)	533
Bsp1286I	GDGCHC	2 cut(s)	468, 1147
Bsp143I	GATC	8 cut(s)	1009, 1093, 1273, 1284, 1361, 1464, 1629, 1714
Bsp19I	CCATGG	1 cut(s)	327
BspCNI	CTCAG	8 cut(s)	454, 460, 483, 655, 709, 955, 964, 1363
BspLI	GGNNCC	5 cut(s)	333, 1004, 1449, 1564, 1833
BspMAI	CTGCAG	1 cut(s)	1428
BspMI	ACCTGC	1 cut(s)	537
BspPI	GGATC	5 cut(s)	1017, 1281, 1356, 1459, 1637
BspQI	GCTCTTC	1 cut(s)	1152
BspT107I	GGYRCC	2 cut(s)	1447, 1562
BspTNI	GGTCTC	1 cut(s)	209
BsrDI	GCAATG	2 cut(s)	420, 1413
BsrFI	RCCGGY	2 cut(s)	128, 487
BsrI	ACTGG	3 cut(s)	385, 609, 975
BssAI	RCCGGY	2 cut(s)	128, 487
BssECI	CCNNGG	5 cut(s)	162, 327, 533, 829, 1625
BssMI	GATC	8 cut(s)	1009, 1093, 1273, 1284, 1361, 1464, 1629, 1714
BssNI	GRCGYC	1 cut(s)	189
BssT1I	CCWWGG	3 cut(s)	162, 327, 829
Bst2UI	CCWGG	2 cut(s)	1007, 1452
Bst4CI	ACNGT	8 cut(s)	13, 399, 479, 499, 1220, 1440, 1513, 1588
Bst6I	CTCTTC	4 cut(s)	558, 1029, 1068, 1152
BstACI	GRCGYC	1 cut(s)	189
BstAPI	GCANNNNNTGC	1 cut(s)	1865
BstBAI	YACGTR	2 cut(s)	1619, 1709
BstC8I	GCNNGC	3 cut(s)	130, 867, 1472
BstDSI	CCRYGG	1 cut(s)	327
BstF5I	GGATG	6 cut(s)	415, 817, 824, 867, 1359, 1738
BstH2I	RGCGCY	1 cut(s)	578
BstHHI	GCGC	3 cut(s)	233, 577, 1572
BstKTI	GATC	8 cut(s)	1012, 1096, 1276, 1287, 1364, 1467, 1632, 1717
BstMAI	GTCTC	4 cut(s)	55, 209, 250, 745
BstMBI	GATC	8 cut(s)	1009, 1093, 1273, 1284, 1361, 1464, 1629, 1714
BstMWI	GCNNNNNNNGC	3 cut(s)	230, 1120, 1865
BstNI	CCWGG	2 cut(s)	1007, 1452
BstNSI	RCATGY	2 cut(s)	1044, 1389
BstPAI	GACNNNNGTC	1 cut(s)	919
BstSCI	CCNGG	5 cut(s)	532, 533, 1005, 1450, 1768
BstSFI	CTRYAG	1 cut(s)	1424
BstV1I	GCAGC	7 cut(s)	91, 137, 1177, 1344, 1461, 1852, 1852
BstX2I	RGATCY	3 cut(s)	1093, 1284, 1464
BstYI	RGATCY	3 cut(s)	1093, 1284, 1464
Bsu36I	CCTNAGG	1 cut(s)	470
BtgI	CCRYGG	1 cut(s)	327
BtgZI	GCGATG	1 cut(s)	1002
BtrI	CACGTC	1 cut(s)	917
BtsCI	GGATG	6 cut(s)	415, 817, 824, 867, 1359, 1738
BtsI	GCAGTG	2 cut(s)	226, 1345
BtsIMutI	CAGTG	8 cut(s)	226, 395, 459, 982, 1345, 1509, 1593, 1879
BveI	ACCTGC	1 cut(s)	537
Cac8I	GCNNGC	3 cut(s)	130, 867, 1472
CaiI	CAGNNNCTG	2 cut(s)	397, 477
CfoI	GCGC	3 cut(s)	233, 577, 1572
Cfr10I	RCCGGY	2 cut(s)	128, 487
Cfr13I	GGNCC	2 cut(s)	271, 526
Cfr9I	CCCGGG	1 cut(s)	533
CseI	GACGC	2 cut(s)	14, 197
Csp6I	GTAC	4 cut(s)	882, 986, 1563, 1732
CviAII	CATG	8 cut(s)	262, 328, 455, 1041, 1169, 1386, 1499, 1633
CviQI	GTAC	4 cut(s)	882, 986, 1563, 1732
DpnI	GATC	8 cut(s)	1011, 1095, 1275, 1286, 1363, 1466, 1631, 1716
DpnII	GATC	8 cut(s)	1009, 1093, 1273, 1284, 1361, 1464, 1629, 1714
DrdI	GACNNNNNNGTC	2 cut(s)	11, 242
DseDI	GACNNNNNNGTC	2 cut(s)	11, 242
Eam1104I	CTCTTC	4 cut(s)	558, 1029, 1068, 1152
EarI	CTCTTC	4 cut(s)	558, 1029, 1068, 1152
EciI	GGCGGA	2 cut(s)	1457, 1799
Eco130I	CCWWGG	3 cut(s)	162, 327, 829
Eco24I	GRGCYC	1 cut(s)	1147
Eco31I	GGTCTC	1 cut(s)	209
Eco47I	GGWCC	2 cut(s)	271, 526
Eco47III	AGCGCT	1 cut(s)	576
Eco81I	CCTNAGG	1 cut(s)	470
Eco88I	CYCGRG	1 cut(s)	533
EcoO109I	RGGNCCY	1 cut(s)	526
EcoRII	CCWGG	2 cut(s)	1005, 1450
EcoT14I	CCWWGG	3 cut(s)	162, 327, 829
EcoT22I	ATGCAT	1 cut(s)	826
EcoT38I	GRGCYC	1 cut(s)	1147
ErhI	CCWWGG	3 cut(s)	162, 327, 829
Esp3I	CGTCTC	1 cut(s)	250
FaeI	CATG	8 cut(s)	265, 331, 458, 1044, 1172, 1389, 1502, 1636
FaqI	GGGAC	3 cut(s)	236, 465, 488
FatI	CATG	8 cut(s)	261, 327, 454, 1040, 1168, 1385, 1498, 1632
FauI	CCCGC	3 cut(s)	296, 492, 844
FblI	GTMKAC	1 cut(s)	186
FokI	GGATG	6 cut(s)	422, 811, 824, 874, 1366, 1725
FriOI	GRGCYC	1 cut(s)	1147
FspBI	CTAG	3 cut(s)	912, 999, 1377
FspI	TGCGCA	1 cut(s)	1571
GlaI	GCGC	3 cut(s)	232, 576, 1571
GsaI	CCCAGC	2 cut(s)	23, 47
GsuI	CTGGAG	1 cut(s)	599
HaeII	RGCGCY	1 cut(s)	578
HapII	CCGG	6 cut(s)	83, 129, 488, 518, 534, 1769
HgaI	GACGC	2 cut(s)	14, 197
HhaI	GCGC	3 cut(s)	233, 577, 1572
Hin1I	GRCGYC	1 cut(s)	189
Hin1II	CATG	8 cut(s)	265, 331, 458, 1044, 1172, 1389, 1502, 1636
Hin6I	GCGC	3 cut(s)	231, 575, 1570
HinP1I	GCGC	3 cut(s)	231, 575, 1570
HincII	GTYRAC	2 cut(s)	187, 1327
HindII	GTYRAC	2 cut(s)	187, 1327
HpaI	GTTAAC	1 cut(s)	1327
HpaII	CCGG	6 cut(s)	83, 129, 488, 518, 534, 1769
HphI	GGTGA	5 cut(s)	7, 746, 866, 992, 1604
Hpy166II	GTNNAC	4 cut(s)	187, 884, 1327, 1436
Hpy188III	TCNNGA	4 cut(s)	70, 322, 725, 1271
Hpy8I	GTNNAC	4 cut(s)	187, 884, 1327, 1436
Hpy99I	CGWCG	6 cut(s)	146, 179, 185, 188, 191, 308
HpyCH4III	ACNGT	8 cut(s)	13, 399, 479, 499, 1220, 1440, 1513, 1588
HpyCH4IV	ACGT	4 cut(s)	916, 984, 1618, 1708
HpyF10VI	GCNNNNNNNGC	3 cut(s)	230, 1120, 1865
HpySE526I	ACGT	4 cut(s)	916, 984, 1618, 1708
Hsp92I	GRCGYC	1 cut(s)	189
Hsp92II	CATG	8 cut(s)	265, 331, 458, 1044, 1172, 1389, 1502, 1636
HspAI	GCGC	3 cut(s)	231, 575, 1570
KpnI	GGTACC	1 cut(s)	1566
KroI	GCCGGC	1 cut(s)	128
KroNI	GCCGGC	1 cut(s)	130
KspAI	GTTAAC	1 cut(s)	1327
Kzo9I	GATC	8 cut(s)	1009, 1093, 1273, 1284, 1361, 1464, 1629, 1714
LguI	GCTCTTC	1 cut(s)	1152
LmnI	GCTCC	5 cut(s)	60, 1002, 1162, 1725, 1837
Lsp1109I	GCAGC	7 cut(s)	91, 137, 1177, 1344, 1461, 1852, 1852
LweI	GCATC	7 cut(s)	811, 833, 852, 941, 949, 985, 1344
MaeI	CTAG	3 cut(s)	912, 999, 1377
MaeII	ACGT	4 cut(s)	916, 984, 1618, 1708
MaeIII	GTNAC	7 cut(s)	13, 275, 697, 980, 1505, 1513, 1582
MalI	GATC	8 cut(s)	1011, 1095, 1275, 1286, 1363, 1466, 1631, 1716
MboI	GATC	8 cut(s)	1009, 1093, 1273, 1284, 1361, 1464, 1629, 1714
MflI	RGATCY	3 cut(s)	1093, 1284, 1464
MhlI	GDGCHC	2 cut(s)	468, 1147
MluCI	AATT	6 cut(s)	556, 816, 1028, 1081, 1225, 1524
MlyI	GAGTC	6 cut(s)	80, 104, 676, 883, 929, 1382
MmeI	TCCRAC	3 cut(s)	38, 132, 857
Mph1103I	ATGCAT	1 cut(s)	826
MreI	CGCCGGCG	1 cut(s)	128
MroNI	GCCGGC	1 cut(s)	128
MseI	TTAA	4 cut(s)	363, 414, 1326, 1921
MslI	CAYNNNNRTG	2 cut(s)	425, 1299
MspA1I	CMGCKG	3 cut(s)	47, 628, 1474
MspI	CCGG	6 cut(s)	83, 129, 488, 518, 534, 1769
MspR9I	CCNGG	5 cut(s)	534, 535, 1007, 1452, 1770
Mva1269I	GAATGC	2 cut(s)	741, 1464
MvaI	CCWGG	2 cut(s)	1007, 1452
MwoI	GCNNNNNNNGC	3 cut(s)	230, 1120, 1865
NaeI	GCCGGC	1 cut(s)	130
NciI	CCSGG	3 cut(s)	534, 535, 1770
NcoI	CCATGG	1 cut(s)	327
NdeII	GATC	8 cut(s)	1009, 1093, 1273, 1284, 1361, 1464, 1629, 1714
NgoMIV	GCCGGC	1 cut(s)	128
NlaIII	CATG	8 cut(s)	265, 331, 458, 1044, 1172, 1389, 1502, 1636
NlaIV	GGNNCC	5 cut(s)	333, 1004, 1449, 1564, 1833
NmuCI	GTSAC	4 cut(s)	13, 275, 980, 1513
NsbI	TGCGCA	1 cut(s)	1571
NsiI	ATGCAT	1 cut(s)	826
NspI	RCATGY	2 cut(s)	1044, 1389
PciSI	GCTCTTC	1 cut(s)	1152
PcsI	WCGNNNNNNNCGW	2 cut(s)	129, 183
PctI	GAATGC	2 cut(s)	741, 1464
PdiI	GCCGGC	1 cut(s)	130
PfeI	GAWTC	7 cut(s)	344, 619, 659, 721, 947, 1133, 1885
PflFI	GACNNNGTC	2 cut(s)	269, 397
PflMI	CCANNNNNTGG	2 cut(s)	328, 1550
PleI	GAGTC	6 cut(s)	80, 104, 675, 882, 928, 1381
PpsI	GAGTC	6 cut(s)	80, 104, 675, 882, 928, 1381
Ppu21I	YACGTR	2 cut(s)	1619, 1709
PpuMI	RGGWCCY	1 cut(s)	526
PshAI	GACNNNNGTC	1 cut(s)	919
Psp5II	RGGWCCY	1 cut(s)	526
Psp6I	CCWGG	2 cut(s)	1005, 1450
PspFI	CCCAGC	2 cut(s)	19, 43
PspGI	CCWGG	2 cut(s)	1005, 1450
PspN4I	GGNNCC	5 cut(s)	333, 1004, 1449, 1564, 1833
PspPI	GGNCC	2 cut(s)	271, 526
PspPPI	RGGWCCY	1 cut(s)	526
PstI	CTGCAG	1 cut(s)	1428
PstNI	CAGNNNCTG	2 cut(s)	397, 477
PsuI	RGATCY	3 cut(s)	1093, 1284, 1464
PsyI	GACNNNGTC	2 cut(s)	269, 397
PvuII	CAGCTG	2 cut(s)	47, 1474
RsaI	GTAC	4 cut(s)	883, 987, 1564, 1733
RsaNI	GTAC	4 cut(s)	882, 986, 1563, 1732
RseI	CAYNNNNRTG	2 cut(s)	425, 1299
SalI	GTCGAC	1 cut(s)	185
SapI	GCTCTTC	1 cut(s)	1152
SaqAI	TTAA	4 cut(s)	363, 414, 1326, 1921
Sau3AI	GATC	8 cut(s)	1009, 1093, 1273, 1284, 1361, 1464, 1629, 1714
Sau96I	GGNCC	2 cut(s)	271, 526
SchI	GAGTC	6 cut(s)	80, 104, 676, 883, 929, 1382
ScrFI	CCNGG	5 cut(s)	534, 535, 1007, 1452, 1770
SduI	GDGCHC	2 cut(s)	468, 1147
SfaNI	GCATC	7 cut(s)	811, 833, 852, 941, 949, 985, 1344
SfcI	CTRYAG	1 cut(s)	1424
SgrAI	CRCCGGYG	2 cut(s)	128, 487
SgrDI	CGTCGACG	1 cut(s)	185
SinI	GGWCC	2 cut(s)	271, 526
SmaI	CCCGGG	1 cut(s)	535
SmiMI	CAYNNNNRTG	2 cut(s)	425, 1299
SmlI	CTYRAG	3 cut(s)	1109, 1288, 1668
SmoI	CTYRAG	3 cut(s)	1109, 1288, 1668
Sse9I	AATT	6 cut(s)	556, 816, 1028, 1081, 1225, 1524
SspI	AATATT	1 cut(s)	1536
SspMI	CTAG	3 cut(s)	912, 999, 1377
StyD4I	CCNGG	5 cut(s)	532, 533, 1005, 1450, 1768
StyI	CCWWGG	3 cut(s)	162, 327, 829
TaaI	ACNGT	8 cut(s)	13, 399, 479, 499, 1220, 1440, 1513, 1588
TaiI	ACGT	4 cut(s)	919, 987, 1621, 1711
TaqI	TCGA	3 cut(s)	144, 186, 614
TasI	AATT	6 cut(s)	556, 816, 1028, 1081, 1225, 1524
TatI	WGTACW	1 cut(s)	881
TauI	GCSGC	3 cut(s)	128, 213, 1616
TfiI	GAWTC	7 cut(s)	344, 619, 659, 721, 947, 1133, 1885
Tru1I	TTAA	4 cut(s)	363, 414, 1326, 1921
Tru9I	TTAA	4 cut(s)	363, 414, 1326, 1921
TscAI	CASTG	8 cut(s)	233, 402, 466, 982, 1345, 1516, 1593, 1879
TseFI	GTSAC	4 cut(s)	13, 275, 980, 1513
TseI	GCWGC	7 cut(s)	79, 150, 1165, 1357, 1474, 1840, 1865
Tsp45I	GTSAC	4 cut(s)	13, 275, 980, 1513
TspDTI	ATGAA	5 cut(s)	1104, 1143, 1278, 1727, 1792
TspGWI	ACGGA	2 cut(s)	238, 263
TspMI	CCCGGG	1 cut(s)	533
TspRI	CASTG	8 cut(s)	233, 402, 466, 982, 1345, 1516, 1593, 1879
Tth111I	GACNNNGTC	2 cut(s)	269, 397
Van91I	CCANNNNNTGG	2 cut(s)	328, 1550
VpaK11BI	GGWCC	2 cut(s)	271, 526
XapI	RAATTY	3 cut(s)	556, 1028, 1225
XceI	RCATGY	2 cut(s)	1044, 1389
XmaI	CCCGGG	1 cut(s)	533
XmiI	GTMKAC	1 cut(s)	186
XspI	CTAG	3 cut(s)	912, 999, 1377
Zsp2I	ATGCAT	1 cut(s)	826

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.