MD14G1145600.v1.1

Encoded by

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
Physical Location & Seq
Reverse (-)
23852813 .. 23855571
2759 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1145600.v1.1.491

Sequence Viewer

Length: 1266 bp
ATGGATTCATATCTAACACGGTGCTCATCTTCAACTCATACTCTTTCGGTGGTTGAGTGCTTCCTCTTCCAGCAACATCCATTTCGGAATTACTACTTCATTATTAGCAGGAAAATGGCACGCTGTTTTCAAGGTTGGGTATTTTTGTTAGCCGCGCTAGTATTGGCATTAAGCACTCCATGTTCACATGCACATCTGAAACACAAGAAATTTAAGACCAAGACTGGCGTCTACCTCTCCCCTAAGTTTGTGTCGGAACCAGGATTAAGTTCCAGCAAATACTTTTACAACGTTCACTTCCCAAAAGGTCACATTGCCCTAAAGAGTTTCAATGCTGAAGTAATTGATGAAGAAGGGAATTCCAGTCCTCTTCATGAAGTCTACCTCCATCACTGGATTGTTGAAAGATATTATGCTCGGATAGGTTACGTGGAGCCAGAGCAGCAGCTTCCCCTGCAGCTCTCGGAATCGGATGTTATATGGTTGAGGAACAGTGGGATGTGCCAGAATGGTGCTCTTGGACAATATTTCGGACTCGGATCCGAAACACGAAAAACAGCCACAGACGTTCCAGGTCATTATGGAATCGAAGTTGGGGATGGTAAAGGGGTTCCTGATGGGTTTGAGGAGAGATGGATGCTCAATGTGCATGCAATTGATACTAGAGGAGTGGAAGATGACCTAGGGTGCACGGAGTGCAGGTGTGATATGTATAACGTGTCCAGGGATCAAAGTGGCCAGCCTCTGCCGGCTGGGTACACCGGGGGTTTGACATGTTGCCCTGACGGTGCAAAGTGCAGACTGAAACAAGGGTTTGATGGTGAAAAGAAAAACCACTACTTGAGATATACTGTGAAGTGGGTTGACTGGTCTGAGTCTGTTGTGCCTGTCAAGGTTTATATCCTTGATGTCACTGATAGAATGAATCATTCAGCGCCTACTGGAGCTAAACACAATTGCCTGGTCGAATATGATGTTGAAAAATCTTGCAATGCCACTAATGGGTGCTTAGACAACAAATGGGCAAAGATTACAATGCCAACTGGTGGTCATGTCATCTATGGTGTAGCCCATCAGCACAGGGGGGGGCTTGGTTCAACACTGCATGGAGAGGATGGAAGGGTTTTGTGTTCGTCAACACCAATTTATGGAAAAGGAAAAGAAGCGGGAAATGAGGCTGGTTATATCGTTGGAATGACCACTTGTTACCCTTGGCCGGGCTCAGTCAAGATAAAAGATGGGGAGACACTGAACTGTAGTTTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

422

Amino Acids

46.91

Weight (kDa)

7.01

Isoelectric Point (pI)

39.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SURNod19 PF07712 72 - 418 2.6e-159 Stress up-regulated Nod 19
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 690
Acc36I ACCTGC 1 cut(s) 690
AccB7I CCANNNNNTGG 2 cut(s) 1046, 1148
AccI GTMKAC 2 cut(s) 231, 381
AccII CGCG 1 cut(s) 155
AciI CCGC 2 cut(s) 153, 1166
AclI AACGTT 1 cut(s) 291
AclWI GGATC 3 cut(s) 534, 547, 735
AcoI YGGCCR 2 cut(s) 736, 1214
AcsI RAATTY 2 cut(s) 209, 358
AcuI CTGAAG 1 cut(s) 357
AcyI GRCGYC 1 cut(s) 228
AdeI CACNNNGTG 1 cut(s) 696
AfaI GTAC 1 cut(s) 758
AfiI CCNNNNNNNGG 5 cut(s) 1002, 1046, 1148, 1216, 1217
AflIII ACRYGT 2 cut(s) 717, 773
AgsI TTSAA 6 cut(s) 33, 131, 331, 404, 980, 1098
AjnI CCWGG 4 cut(s) 259, 571, 722, 960
AluBI AGCT 3 cut(s) 448, 460, 947
AluI AGCT 3 cut(s) 448, 460, 947
Alw21I GWGCWC 3 cut(s) 26, 517, 692
Alw26I GTCTC 1 cut(s) 1238
Alw44I GTGCAC 1 cut(s) 688
AlwI GGATC 3 cut(s) 534, 547, 735
AlwNI CAGNNNCTG 1 cut(s) 745
AoxI GGCC 2 cut(s) 736, 1214
ApaLI GTGCAC 1 cut(s) 688
ApeKI GCWGC 3 cut(s) 442, 445, 457
ApoI RAATTY 2 cut(s) 209, 358
AspA2I CCTAGG 1 cut(s) 682
AspLEI GCGC 2 cut(s) 157, 937
AsuC2I CCSGG 2 cut(s) 763, 1218
AsuHPI GGTGA 1 cut(s) 833
AvrII CCTAGG 1 cut(s) 682
BaeGI GKGCMC 1 cut(s) 692
BalI TGGCCA 1 cut(s) 738
BamHI GGATCC 1 cut(s) 539
BanII GRGCYC 1 cut(s) 1223
Bbv12I GWGCWC 3 cut(s) 26, 517, 692
BbvI GCAGC 3 cut(s) 454, 457, 469
BccI CCATC 8 cut(s) 396, 593, 611, 627, 812, 1080, 1109, 1232
BciT130I CCWGG 4 cut(s) 261, 573, 724, 962
BcnI CCSGG 2 cut(s) 763, 1218
BcoDI GTCTC 1 cut(s) 1238
BfaI CTAG 3 cut(s) 158, 663, 683
BfmI CTRYAG 2 cut(s) 455, 1255
BfoI RGCGCY 1 cut(s) 938
BfuAI ACCTGC 1 cut(s) 690
BisI GCNGC 4 cut(s) 153, 443, 446, 458
BlnI CCTAGG 1 cut(s) 682
BlsI GCNGC 4 cut(s) 154, 444, 447, 459
Bme1390I CCNGG 6 cut(s) 261, 573, 724, 763, 962, 1218
BmiI GGNNCC 4 cut(s) 258, 435, 541, 612
BmrFI CCNGG 6 cut(s) 261, 573, 724, 763, 962, 1218
BmsI GCATC 1 cut(s) 627
BoxI GACNNNNGTC 1 cut(s) 227
BpmI CTGGAG 1 cut(s) 963
BpuEI CTTGAG 1 cut(s) 862
BpuMI CCSGG 2 cut(s) 763, 1218
BsaAI YACGTR 1 cut(s) 430
BsaBI GATNNNNATC 1 cut(s) 9
BsaHI GRCGYC 1 cut(s) 228
BsaJI CCNNGG 4 cut(s) 682, 723, 762, 1211
BsaXI ACNNNNNCTCC 2 cut(s) 686, 716
Bsc4I CCNNNNNNNGG 5 cut(s) 1002, 1046, 1148, 1216, 1217
Bse118I RCCGGY 1 cut(s) 748
Bse1I ACTGG 6 cut(s) 229, 363, 398, 872, 946, 1048
Bse3DI GCAATG 2 cut(s) 312, 997
Bse8I GATNNNNATC 1 cut(s) 9
BseBI CCWGG 4 cut(s) 261, 573, 724, 962
BseDI CCNNGG 4 cut(s) 682, 723, 762, 1211
BseGI GGATG 6 cut(s) 76, 478, 504, 604, 642, 1120
BseJI GATNNNNATC 1 cut(s) 9
BseLI CCNNNNNNNGG 5 cut(s) 1002, 1046, 1148, 1216, 1217
BseMI GCAATG 2 cut(s) 312, 997
BseMII CTCAG 2 cut(s) 864, 1236
BseNI ACTGG 6 cut(s) 229, 363, 398, 872, 946, 1048
BseRI GAGGAG 2 cut(s) 641, 681
BseSI GKGCMC 1 cut(s) 692
BseXI GCAGC 3 cut(s) 454, 457, 469
BseYI CCCAGC 1 cut(s) 752
BsgI GTGCAG 2 cut(s) 718, 817
Bsh1236I CGCG 1 cut(s) 155
BshFI GGCC 2 cut(s) 738, 1216
BsiHKAI GWGCWC 3 cut(s) 26, 517, 692
BsiSI CCGG 3 cut(s) 749, 762, 1217
BslI CCNNNNNNNGG 5 cut(s) 1002, 1046, 1148, 1216, 1217
BsmAI GTCTC 1 cut(s) 1238
BsnI GGCC 2 cut(s) 738, 1216
Bsp1286I GDGCHC 4 cut(s) 26, 517, 692, 1223
Bsp143I GATC 2 cut(s) 539, 727
BspACI CCGC 2 cut(s) 153, 1166
BspANI GGCC 2 cut(s) 738, 1216
BspCNI CTCAG 2 cut(s) 865, 1235
BspFNI CGCG 1 cut(s) 155
BspHI TCATGA 1 cut(s) 373
BspLI GGNNCC 4 cut(s) 258, 435, 541, 612
BspMAI CTGCAG 1 cut(s) 459
BspMI ACCTGC 1 cut(s) 690
BspPI GGATC 3 cut(s) 534, 547, 735
BsrDI GCAATG 2 cut(s) 312, 997
BsrFI RCCGGY 1 cut(s) 748
BsrI ACTGG 6 cut(s) 229, 363, 398, 872, 946, 1048
BssAI RCCGGY 1 cut(s) 748
BssECI CCNNGG 4 cut(s) 682, 723, 762, 1211
BssMI GATC 2 cut(s) 539, 727
BssNI GRCGYC 1 cut(s) 228
BssT1I CCWWGG 2 cut(s) 682, 1211
Bst2UI CCWGG 4 cut(s) 261, 573, 724, 962
Bst4CI ACNGT 5 cut(s) 21, 494, 788, 853, 1256
Bst6I CTCTTC 2 cut(s) 71, 375
BstACI GRCGYC 1 cut(s) 228
BstAPI GCANNNNNTGC 1 cut(s) 696
BstBAI YACGTR 1 cut(s) 430
BstC8I GCNNGC 4 cut(s) 121, 651, 740, 750
BstDEI CTNAG 4 cut(s) 243, 873, 1009, 1222
BstF5I GGATG 6 cut(s) 76, 478, 504, 604, 642, 1120
BstFNI CGCG 1 cut(s) 155
BstH2I RGCGCY 1 cut(s) 938
BstHHI GCGC 2 cut(s) 157, 937
BstKTI GATC 2 cut(s) 542, 730
BstMAI GTCTC 1 cut(s) 1238
BstMBI GATC 2 cut(s) 539, 727
BstMWI GCNNNNNNNGC 4 cut(s) 442, 454, 646, 696
BstNI CCWGG 4 cut(s) 261, 573, 724, 962
BstNSI RCATGY 3 cut(s) 191, 653, 777
BstPAI GACNNNNGTC 1 cut(s) 227
BstSCI CCNGG 6 cut(s) 259, 571, 722, 761, 960, 1216
BstSFI CTRYAG 2 cut(s) 455, 1255
BstSLI GKGCMC 1 cut(s) 692
BstUI CGCG 1 cut(s) 155
BstV1I GCAGC 3 cut(s) 454, 457, 469
BstX2I RGATCY 1 cut(s) 539
BstYI RGATCY 1 cut(s) 539
BsuRI GGCC 2 cut(s) 738, 1216
BtsCI GGATG 6 cut(s) 76, 478, 504, 604, 642, 1120
BtsI GCAGTG 1 cut(s) 1100
BtsIMutI CAGTG 5 cut(s) 391, 499, 912, 1100, 1247
BveI ACCTGC 1 cut(s) 690
Cac8I GCNNGC 4 cut(s) 121, 651, 740, 750
CaiI CAGNNNCTG 1 cut(s) 745
CciI TCATGA 1 cut(s) 373
CfoI GCGC 2 cut(s) 157, 937
Cfr10I RCCGGY 1 cut(s) 748
CseI GACGC 1 cut(s) 217
Csp6I GTAC 1 cut(s) 757
CviAII CATG 7 cut(s) 180, 188, 374, 650, 774, 1052, 1106
CviQI GTAC 1 cut(s) 757
DdeI CTNAG 4 cut(s) 243, 873, 1009, 1222
DpnI GATC 2 cut(s) 541, 729
DpnII GATC 2 cut(s) 539, 727
DraIII CACNNNGTG 1 cut(s) 696
EaeI YGGCCR 2 cut(s) 736, 1214
Eam1104I CTCTTC 2 cut(s) 71, 375
EarI CTCTTC 2 cut(s) 71, 375
Eco130I CCWWGG 2 cut(s) 682, 1211
Eco24I GRGCYC 1 cut(s) 1223
Eco57I CTGAAG 1 cut(s) 357
EcoRI GAATTC 1 cut(s) 358
EcoRII CCWGG 4 cut(s) 259, 571, 722, 960
EcoT14I CCWWGG 2 cut(s) 682, 1211
EcoT38I GRGCYC 1 cut(s) 1223
ErhI CCWWGG 2 cut(s) 682, 1211
FaeI CATG 7 cut(s) 183, 191, 377, 653, 777, 1055, 1109
FatI CATG 7 cut(s) 179, 187, 373, 649, 773, 1051, 1105
FauI CCCGC 1 cut(s) 1159
FblI GTMKAC 2 cut(s) 231, 381
Fnu4HI GCNGC 4 cut(s) 153, 443, 446, 458
FokI GGATG 6 cut(s) 63, 485, 511, 611, 649, 1127
FriOI GRGCYC 1 cut(s) 1223
Fsp4HI GCNGC 4 cut(s) 153, 443, 446, 458
FspBI CTAG 3 cut(s) 158, 663, 683
GlaI GCGC 2 cut(s) 156, 936
GluI GCNGC 4 cut(s) 153, 443, 446, 458
GsaI CCCAGC 1 cut(s) 756
GsuI CTGGAG 1 cut(s) 963
HaeII RGCGCY 1 cut(s) 938
HaeIII GGCC 2 cut(s) 738, 1216
HapII CCGG 3 cut(s) 749, 762, 1217
HgaI GACGC 1 cut(s) 217
HhaI GCGC 2 cut(s) 157, 937
Hin1I GRCGYC 1 cut(s) 228
Hin1II CATG 7 cut(s) 183, 191, 377, 653, 777, 1055, 1109
Hin6I GCGC 2 cut(s) 155, 935
HinP1I GCGC 2 cut(s) 155, 935
HincII GTYRAC 2 cut(s) 865, 1137
HindII GTYRAC 2 cut(s) 865, 1137
HinfI GANTC 6 cut(s) 5, 467, 534, 585, 875, 925
HpaII CCGG 3 cut(s) 749, 762, 1217
HphI GGTGA 1 cut(s) 833
Hpy166II GTNNAC 8 cut(s) 185, 232, 295, 382, 690, 759, 865, 1137
Hpy188III TCNNGA 3 cut(s) 374, 614, 1228
Hpy8I GTNNAC 8 cut(s) 185, 232, 295, 382, 690, 759, 865, 1137
HpyAV CCTTC 2 cut(s) 347, 1113
HpyCH4III ACNGT 5 cut(s) 21, 494, 788, 853, 1256
HpyCH4IV ACGT 4 cut(s) 291, 429, 567, 717
HpyF10VI GCNNNNNNNGC 4 cut(s) 442, 454, 646, 696
HpyF3I CTNAG 4 cut(s) 243, 873, 1009, 1222
HpySE526I ACGT 4 cut(s) 291, 429, 567, 717
Hsp92I GRCGYC 1 cut(s) 228
Hsp92II CATG 7 cut(s) 183, 191, 377, 653, 777, 1055, 1109
HspAI GCGC 2 cut(s) 155, 935
KroI GCCGGC 1 cut(s) 748
KroNI GCCGGC 1 cut(s) 750
Kzo9I GATC 2 cut(s) 539, 727
LmnI GCTCC 2 cut(s) 433, 944
Lsp1109I GCAGC 3 cut(s) 454, 457, 469
LweI GCATC 1 cut(s) 627
MaeI CTAG 3 cut(s) 158, 663, 683
MaeII ACGT 4 cut(s) 291, 429, 567, 717
MaeIII GTNAC 4 cut(s) 308, 425, 910, 1205
MalI GATC 2 cut(s) 541, 729
MboI GATC 2 cut(s) 539, 727
MboII GAAGA 5 cut(s) 21, 58, 362, 362, 686
MfeI CAATTG 2 cut(s) 654, 955
MflI RGATCY 1 cut(s) 539
MhlI GDGCHC 4 cut(s) 26, 517, 692, 1223
MlsI TGGCCA 1 cut(s) 738
MluCI AATT 7 cut(s) 88, 209, 342, 358, 654, 955, 1143
MluNI TGGCCA 1 cut(s) 738
MlyI GAGTC 2 cut(s) 528, 884
MmeI TCCRAC 2 cut(s) 234, 1171
Mox20I TGGCCA 1 cut(s) 738
MroNI GCCGGC 1 cut(s) 748
MscI TGGCCA 1 cut(s) 738
MseI TTAA 3 cut(s) 170, 213, 266
Msp20I TGGCCA 1 cut(s) 738
MspI CCGG 3 cut(s) 749, 762, 1217
MspR9I CCNGG 6 cut(s) 261, 573, 724, 763, 962, 1218
MunI CAATTG 2 cut(s) 654, 955
MvaI CCWGG 4 cut(s) 261, 573, 724, 962
MvnI CGCG 1 cut(s) 155
MwoI GCNNNNNNNGC 4 cut(s) 442, 454, 646, 696
NaeI GCCGGC 1 cut(s) 750
NciI CCSGG 2 cut(s) 763, 1218
NdeII GATC 2 cut(s) 539, 727
NgoMIV GCCGGC 1 cut(s) 748
NlaIII CATG 7 cut(s) 183, 191, 377, 653, 777, 1055, 1109
NlaIV GGNNCC 4 cut(s) 258, 435, 541, 612
NmuCI GTSAC 2 cut(s) 308, 910
NspI RCATGY 3 cut(s) 191, 653, 777
PaeI GCATGC 1 cut(s) 653
PagI TCATGA 1 cut(s) 373
PaqCI CACCTGC 1 cut(s) 690
PciI ACATGT 1 cut(s) 773
PdiI GCCGGC 1 cut(s) 750
PfeI GAWTC 4 cut(s) 5, 467, 585, 925
PflMI CCANNNNNTGG 2 cut(s) 1046, 1148
PkrI GCNGC 4 cut(s) 154, 444, 447, 459
PleI GAGTC 2 cut(s) 528, 883
PpsI GAGTC 2 cut(s) 528, 883
Ppu21I YACGTR 1 cut(s) 430
PscI ACATGT 1 cut(s) 773
PshAI GACNNNNGTC 1 cut(s) 227
Psp1406I AACGTT 1 cut(s) 291
Psp6I CCWGG 4 cut(s) 259, 571, 722, 960
PspFI CCCAGC 1 cut(s) 752
PspGI CCWGG 4 cut(s) 259, 571, 722, 960
PspN4I GGNNCC 4 cut(s) 258, 435, 541, 612
PstI CTGCAG 1 cut(s) 459
PstNI CAGNNNCTG 1 cut(s) 745
PsuI RGATCY 1 cut(s) 539
RsaI GTAC 1 cut(s) 758
RsaNI GTAC 1 cut(s) 757
SaqAI TTAA 3 cut(s) 170, 213, 266
SatI GCNGC 4 cut(s) 153, 443, 446, 458
Sau3AI GATC 2 cut(s) 539, 727
SchI GAGTC 2 cut(s) 528, 884
ScrFI CCNGG 6 cut(s) 261, 573, 724, 763, 962, 1218
SduI GDGCHC 4 cut(s) 26, 517, 692, 1223
SfaNI GCATC 1 cut(s) 627
SfcI CTRYAG 2 cut(s) 455, 1255
SmlI CTYRAG 1 cut(s) 841
SmoI CTYRAG 1 cut(s) 841
SphI GCATGC 1 cut(s) 653
Sse9I AATT 7 cut(s) 88, 209, 342, 358, 654, 955, 1143
SsiI CCGC 2 cut(s) 153, 1166
SspI AATATT 1 cut(s) 527
SspMI CTAG 3 cut(s) 158, 663, 683
StyD4I CCNGG 6 cut(s) 259, 571, 722, 761, 960, 1216
StyI CCWWGG 2 cut(s) 682, 1211
TaaI ACNGT 5 cut(s) 21, 494, 788, 853, 1256
TaiI ACGT 4 cut(s) 294, 432, 570, 720
TaqI TCGA 2 cut(s) 588, 966
TasI AATT 7 cut(s) 88, 209, 342, 358, 654, 955, 1143
TauI GCSGC 1 cut(s) 155
TfiI GAWTC 4 cut(s) 5, 467, 585, 925
Tru1I TTAA 3 cut(s) 170, 213, 266
Tru9I TTAA 3 cut(s) 170, 213, 266
TscAI CASTG 5 cut(s) 398, 499, 919, 1107, 1254
TseFI GTSAC 2 cut(s) 308, 910
TseI GCWGC 3 cut(s) 442, 445, 457
Tsp45I GTSAC 2 cut(s) 308, 910
TspDTI ATGAA 5 cut(s) 88, 362, 363, 390, 938
TspGWI ACGGA 1 cut(s) 707
TspRI CASTG 5 cut(s) 398, 499, 919, 1107, 1254
Van91I CCANNNNNTGG 2 cut(s) 1046, 1148
VneI GTGCAC 1 cut(s) 688
XapI RAATTY 2 cut(s) 209, 358
XceI RCATGY 3 cut(s) 191, 653, 777
XmaJI CCTAGG 1 cut(s) 682
XmiI GTMKAC 2 cut(s) 231, 381
XspI CTAG 3 cut(s) 158, 663, 683
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.