Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0002328

Physical Location & Seq

Genomic Coordinates Reverse (-)

3617551 .. 3619127

Gene Structure 1577 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G051700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 753 bp

ATGAACCACCACCACCAAAACGATCCACCATCTTCCTTGCCTAGCAACCCTAACCCAGAACCAGACCCTTCTCTCCCTTGCAATGGCTATCACAAGATCTCTCTCCCTCTTCTTCGCCGCTGCATGTCCGATCCTTGCAATCCTCCTTCTGCCACCGCCGCCAACCCATCATTCTTTGATCCTTCCCTTTCCTCTGCTTCTACCTGCGGCGGTTCTCTGTCCAATTTCACTCCTCCGTACTCTCCTGATCGCCACCACTGCCCCAAGACTCCATCCCATTCCCCGACTCATGCACTGCCTCCCCTGCCTCCTCCTCACACCTTCCGCCGCTCCGTCTCGGATATCAATCCCTCTCCTGCCAAGGCCTCCTCACGCTTCTCCACCTCCTCCCAAGACCTGGGCACCGACATTGACACTCCCAATTCCAAGAGGCTGAGGAGGATGAAGGATCGCCTCAGAGAGATGAGCCATTGGTGCCAGCAACTGATGCGTGAAGAGGACTTGATGGAACAAGATGAAGATGAGCAACAGCAGGCAGTGGAAGAAGAAGCACAAGTACAGGCTGTTGATGCCACTGATCAAGATTTTCATAACAATACTGGTGCTGCTGAGGATGAGTGTGAGAAAGAATTTGCTGAATCTGTGAGCGTGGAGAAGAAGGATGACTGCTTGGTCATTCACTTCAGGTGTCACTGTGACAAAGCCTATCAGTTCCTTCTCAGTGGAGGAGAGTGTTACTACAAGCTCATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

251

Amino Acids

27.99

Weight (kDa)

5.29

Isoelectric Point (pI)

70.05

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002328)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32235 AT2G32235 AT2G38690
fragaria_vesca	FvH4_4g05130 FvH4_4g33320
malus_domestica	MD04G1182800.v1.1 MD13G1018300.v1.1 MD16G1230200.v1.1
prunus_persica	Prupe.1G051700_v2.0.a1 Prupe.1G335500_v2.0.a1
pyrus_communis	pycom13g19860 pycom16g01500 pycom16g19210
rosa_chinensis	RchiOBHm_Chr4g0396051 RchiOBHm_Chr4g0442521 RchiOBHm_Chr6g0283071
rosa_laevigata	RLG00000006004 RLG00000009576 RLG00000022087 RLG00000026715
rosa_multiflora	Rmu_sc0006325.1_g000008 Rmu_sc0015594.1_g000004 Rmu_ssc0000204.1_g000047
rosa_roxburghii	Rroxscaffold_5G00340860 Rroxscaffold_5G00383290 Rroxscaffold_5G00383350
rosa_rugosa	Rorug02G0266400 Rorug03G0352900 Rorug04G0105700 Rorug04G0341200
rosa_samantha	Rh4AG064900 Rh4AG065800 Rh4BG063800 Rh4CG070300 Rh4CG421900 Rh4DG060600 Rh4DG399900 Rh4DG400500 Rh6AG264200
rosa_wichuraiana	Rw4G005280 Rw4G033990 Rw6G022840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	671
Acc36I	ACCTGC	1 cut(s)	212
AccB1I	GGYRCC	2 cut(s)	401, 474
AccB7I	CCANNNNNTGG	1 cut(s)	397
AccBSI	CCGCTC	1 cut(s)	330
AciI	CCGC	7 cut(s)	118, 156, 159, 207, 210, 325, 328
AclWI	GGATC	4 cut(s)	17, 125, 173, 456
AcsI	RAATTY	1 cut(s)	629
AcuI	CTGAAG	1 cut(s)	667
AfaI	GTAC	2 cut(s)	239, 558
AfiI	CCNNNNNNNGG	2 cut(s)	83, 397
AjnI	CCWGG	1 cut(s)	396
AjuI	GAANNNNNNNTTGG	2 cut(s)	155, 187
AluBI	AGCT	1 cut(s)	745
AluI	AGCT	1 cut(s)	745
Alw26I	GTCTC	1 cut(s)	340
AlwI	GGATC	4 cut(s)	17, 125, 173, 456
AlwNI	CAGNNNCTG	1 cut(s)	484
AoxI	GGCC	1 cut(s)	363
ApeKI	GCWGC	2 cut(s)	120, 605
ApoI	RAATTY	1 cut(s)	629
BaeGI	GKGCMC	1 cut(s)	404
BanI	GGYRCC	2 cut(s)	401, 474
BarI	GAAGNNNNNNTAC	2 cut(s)	540, 572
BbvCI	CCTCAGC	2 cut(s)	434, 609
BbvI	GCAGC	2 cut(s)	107, 592
BccI	CCATC	4 cut(s)	37, 175, 280, 499
BciT130I	CCWGG	1 cut(s)	398
BclI	TGATCA	1 cut(s)	577
BcoDI	GTCTC	1 cut(s)	340
BfaI	CTAG	1 cut(s)	42
BfuAI	ACCTGC	1 cut(s)	212
BglII	AGATCT	1 cut(s)	96
BisI	GCNGC	6 cut(s)	118, 121, 159, 208, 328, 606
BlsI	GCNGC	6 cut(s)	119, 122, 160, 209, 329, 607
Bme1390I	CCNGG	1 cut(s)	398
BmiI	GGNNCC	2 cut(s)	403, 476
BmrFI	CCNGG	1 cut(s)	398
BmsI	GCATC	2 cut(s)	477, 559
Bpu10I	CCTNAGC	2 cut(s)	434, 609
BsaBI	GATNNNNATC	1 cut(s)	345
BsaJI	CCNNGG	2 cut(s)	360, 397
Bsc4I	CCNNNNNNNGG	2 cut(s)	83, 397
Bse1I	ACTGG	1 cut(s)	604
Bse3DI	GCAATG	1 cut(s)	88
Bse8I	GATNNNNATC	1 cut(s)	345
BseBI	CCWGG	1 cut(s)	398
BseDI	CCNNGG	2 cut(s)	360, 397
BseGI	GGATG	4 cut(s)	272, 447, 619, 667
BseJI	GATNNNNATC	1 cut(s)	345
BseLI	CCNNNNNNNGG	2 cut(s)	83, 397
BseMI	GCAATG	1 cut(s)	88
BseMII	CTCAG	4 cut(s)	425, 469, 600, 733
BseNI	ACTGG	1 cut(s)	604
BseRI	GAGGAG	7 cut(s)	222, 300, 303, 358, 376, 451, 741
BseSI	GKGCMC	1 cut(s)	404
BseXI	GCAGC	2 cut(s)	107, 592
BshFI	GGCC	1 cut(s)	365
BshNI	GGYRCC	2 cut(s)	401, 474
BslI	CCNNNNNNNGG	2 cut(s)	83, 397
BsmAI	GTCTC	1 cut(s)	340
BsmBI	CGTCTC	1 cut(s)	340
BsnI	GGCC	1 cut(s)	365
Bsp1286I	GDGCHC	1 cut(s)	404
Bsp143I	GATC	7 cut(s)	22, 96, 130, 178, 247, 448, 577
BspACI	CCGC	7 cut(s)	118, 156, 159, 207, 210, 325, 328
BspANI	GGCC	1 cut(s)	365
BspCNI	CTCAG	4 cut(s)	426, 468, 601, 732
BspLI	GGNNCC	2 cut(s)	403, 476
BspMI	ACCTGC	1 cut(s)	212
BspPI	GGATC	4 cut(s)	17, 125, 173, 456
BspT107I	GGYRCC	2 cut(s)	401, 474
BsrBI	CCGCTC	1 cut(s)	330
BsrDI	GCAATG	1 cut(s)	88
BsrI	ACTGG	1 cut(s)	604
BssECI	CCNNGG	2 cut(s)	360, 397
BssMI	GATC	7 cut(s)	22, 96, 130, 178, 247, 448, 577
BssT1I	CCWWGG	1 cut(s)	360
Bst2UI	CCWGG	1 cut(s)	398
Bst4CI	ACNGT	1 cut(s)	695
Bst6I	CTCTTC	2 cut(s)	114, 489
BstAPI	GCANNNNNTGC	1 cut(s)	487
BstC8I	GCNNGC	2 cut(s)	479, 534
BstDEI	CTNAG	4 cut(s)	434, 455, 609, 719
BstF5I	GGATG	4 cut(s)	272, 447, 619, 667
BstKTI	GATC	7 cut(s)	25, 99, 133, 181, 250, 451, 580
BstMAI	GTCTC	1 cut(s)	340
BstMBI	GATC	7 cut(s)	22, 96, 130, 178, 247, 448, 577
BstMWI	GCNNNNNNNGC	6 cut(s)	158, 258, 304, 474, 487, 569
BstNI	CCWGG	1 cut(s)	398
BstNSI	RCATGY	1 cut(s)	127
BstSCI	CCNGG	1 cut(s)	396
BstSLI	GKGCMC	1 cut(s)	404
BstV1I	GCAGC	2 cut(s)	107, 592
BstX2I	RGATCY	1 cut(s)	96
BstYI	RGATCY	1 cut(s)	96
BsuRI	GGCC	1 cut(s)	365
BtsCI	GGATG	4 cut(s)	272, 447, 619, 667
BtsI	GCAGTG	3 cut(s)	256, 293, 543
BtsIMutI	CAGTG	6 cut(s)	256, 293, 543, 573, 691, 727
BveI	ACCTGC	1 cut(s)	212
Cac8I	GCNNGC	2 cut(s)	479, 534
CaiI	CAGNNNCTG	1 cut(s)	484
Csp6I	GTAC	2 cut(s)	238, 557
CviAII	CATG	3 cut(s)	124, 290, 748
CviJI	RGCY	7 cut(s)	87, 365, 433, 468, 563, 704, 745
CviKI_1	RGCY	7 cut(s)	87, 365, 433, 468, 563, 704, 745
CviQI	GTAC	2 cut(s)	238, 557
DdeI	CTNAG	4 cut(s)	434, 455, 609, 719
DpnI	GATC	7 cut(s)	24, 98, 132, 180, 249, 450, 579
DpnII	GATC	7 cut(s)	22, 96, 130, 178, 247, 448, 577
DrdI	GACNNNNNNGTC	1 cut(s)	671
DseDI	GACNNNNNNGTC	1 cut(s)	671
Eam1104I	CTCTTC	2 cut(s)	114, 489
EarI	CTCTTC	2 cut(s)	114, 489
EciI	GGCGGA	1 cut(s)	314
Eco130I	CCWWGG	1 cut(s)	360
Eco147I	AGGCCT	1 cut(s)	365
Eco32I	GATATC	1 cut(s)	343
Eco57I	CTGAAG	1 cut(s)	667
EcoRII	CCWGG	1 cut(s)	396
EcoRV	GATATC	1 cut(s)	343
EcoT14I	CCWWGG	1 cut(s)	360
ErhI	CCWWGG	1 cut(s)	360
Esp3I	CGTCTC	1 cut(s)	340
FaeI	CATG	3 cut(s)	127, 293, 751
FaiI	YATR	4 cut(s)	125, 291, 591, 749
FatI	CATG	3 cut(s)	123, 289, 747
FbaI	TGATCA	1 cut(s)	577
Fnu4HI	GCNGC	6 cut(s)	118, 121, 159, 208, 328, 606
FokI	GGATG	4 cut(s)	259, 454, 626, 674
Fsp4HI	GCNGC	6 cut(s)	118, 121, 159, 208, 328, 606
FspBI	CTAG	1 cut(s)	42
GluI	GCNGC	6 cut(s)	118, 121, 159, 208, 328, 606
HaeIII	GGCC	1 cut(s)	365
Hin1II	CATG	3 cut(s)	127, 293, 751
HinfI	GANTC	3 cut(s)	268, 286, 638
Hpy188I	TCNGA	3 cut(s)	130, 340, 458
Hpy188III	TCNNGA	2 cut(s)	245, 581
HpyAV	CCTTC	7 cut(s)	78, 156, 192, 331, 439, 652, 725
HpyCH4III	ACNGT	1 cut(s)	695
HpyCH4V	TGCA	4 cut(s)	81, 123, 138, 293
HpyF10VI	GCNNNNNNNGC	6 cut(s)	158, 258, 304, 474, 487, 569
HpyF3I	CTNAG	4 cut(s)	434, 455, 609, 719
Hsp92II	CATG	3 cut(s)	127, 293, 751
Ksp22I	TGATCA	1 cut(s)	577
Kzo9I	GATC	7 cut(s)	22, 96, 130, 178, 247, 448, 577
LmnI	GCTCC	1 cut(s)	335
Lsp1109I	GCAGC	2 cut(s)	107, 592
LweI	GCATC	2 cut(s)	477, 559
MaeI	CTAG	1 cut(s)	42
MaeIII	GTNAC	3 cut(s)	689, 695, 734
MalI	GATC	7 cut(s)	24, 98, 132, 180, 249, 450, 579
MbiI	CCGCTC	1 cut(s)	330
MboI	GATC	7 cut(s)	22, 96, 130, 178, 247, 448, 577
MboII	GAAGA	8 cut(s)	24, 101, 104, 506, 530, 554, 557, 667
MflI	RGATCY	1 cut(s)	96
MhlI	GDGCHC	1 cut(s)	404
MluCI	AATT	3 cut(s)	223, 421, 629
MlyI	GAGTC	2 cut(s)	262, 280
MspA1I	CMGCKG	1 cut(s)	120
MspR9I	CCNGG	1 cut(s)	398
MvaI	CCWGG	1 cut(s)	398
MwoI	GCNNNNNNNGC	6 cut(s)	158, 258, 304, 474, 487, 569
NdeII	GATC	7 cut(s)	22, 96, 130, 178, 247, 448, 577
NlaIII	CATG	3 cut(s)	127, 293, 751
NlaIV	GGNNCC	2 cut(s)	403, 476
NmuCI	GTSAC	2 cut(s)	689, 695
NspI	RCATGY	1 cut(s)	127
PceI	AGGCCT	1 cut(s)	365
PfeI	GAWTC	1 cut(s)	638
PflMI	CCANNNNNTGG	1 cut(s)	397
PkrI	GCNGC	6 cut(s)	119, 122, 160, 209, 329, 607
PleI	GAGTC	2 cut(s)	262, 280
PpsI	GAGTC	2 cut(s)	262, 280
Psp6I	CCWGG	1 cut(s)	396
PspGI	CCWGG	1 cut(s)	396
PspN4I	GGNNCC	2 cut(s)	403, 476
PstNI	CAGNNNCTG	1 cut(s)	484
PsuI	RGATCY	1 cut(s)	96
RsaI	GTAC	2 cut(s)	239, 558
RsaNI	GTAC	2 cut(s)	238, 557
SatI	GCNGC	6 cut(s)	118, 121, 159, 208, 328, 606
Sau3AI	GATC	7 cut(s)	22, 96, 130, 178, 247, 448, 577
SchI	GAGTC	2 cut(s)	262, 280
ScrFI	CCNGG	1 cut(s)	398
SduI	GDGCHC	1 cut(s)	404
SetI	ASST	6 cut(s)	206, 323, 386, 399, 689, 747
SfaNI	GCATC	2 cut(s)	477, 559
Sse9I	AATT	3 cut(s)	223, 421, 629
SseBI	AGGCCT	1 cut(s)	365
SsiI	CCGC	7 cut(s)	118, 156, 159, 207, 210, 325, 328
SspMI	CTAG	1 cut(s)	42
StuI	AGGCCT	1 cut(s)	365
StyD4I	CCNGG	1 cut(s)	396
StyI	CCWWGG	1 cut(s)	360
TaaI	ACNGT	1 cut(s)	695
TasI	AATT	3 cut(s)	223, 421, 629
TatI	WGTACW	1 cut(s)	556
TauI	GCSGC	4 cut(s)	120, 161, 210, 330
TfiI	GAWTC	1 cut(s)	638
TscAI	CASTG	6 cut(s)	263, 300, 543, 580, 698, 727
TseFI	GTSAC	2 cut(s)	689, 695
TseI	GCWGC	2 cut(s)	120, 605
Tsp45I	GTSAC	2 cut(s)	689, 695
TspDTI	ATGAA	4 cut(s)	17, 458, 531, 578
TspGWI	ACGGA	2 cut(s)	225, 322
TspRI	CASTG	6 cut(s)	263, 300, 543, 580, 698, 727
Van91I	CCANNNNNTGG	1 cut(s)	397
XapI	RAATTY	1 cut(s)	629
XceI	RCATGY	1 cut(s)	127
XspI	CTAG	1 cut(s)	42

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.