Major allergen Pru
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 221 |
| AcoI | YGGCCR | 1 cut(s) | 459 |
| AfaI | GTAC | 1 cut(s) | 245 |
| AgsI | TTSAA | 5 cut(s) | 61, 77, 137, 263, 436 |
| AluBI | AGCT | 5 cut(s) | 80, 174, 198, 249, 439 |
| AluI | AGCT | 5 cut(s) | 80, 174, 198, 249, 439 |
| Alw21I | GWGCWC | 1 cut(s) | 353 |
| AlwI | GGATC | 1 cut(s) | 221 |
| AoxI | GGCC | 1 cut(s) | 459 |
| AsuHPI | GGTGA | 2 cut(s) | 191, 386 |
| BalI | TGGCCA | 1 cut(s) | 461 |
| Bbv12I | GWGCWC | 1 cut(s) | 353 |
| BccI | CCATC | 3 cut(s) | 137, 167, 323 |
| BmiI | GGNNCC | 2 cut(s) | 157, 337 |
| BmsI | GCATC | 3 cut(s) | 259, 329, 460 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 17, 49 |
| BsaWI | WCCGGW | 1 cut(s) | 210 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 324, 354 |
| Bse1I | ACTGG | 1 cut(s) | 430 |
| BseGI | GGATG | 3 cut(s) | 39, 90, 403 |
| BseMII | CTCAG | 2 cut(s) | 33, 48 |
| BseNI | ACTGG | 1 cut(s) | 430 |
| BseRI | GAGGAG | 1 cut(s) | 407 |
| BseYI | CCCAGC | 1 cut(s) | 407 |
| BshFI | GGCC | 1 cut(s) | 461 |
| BsiHKAI | GWGCWC | 1 cut(s) | 353 |
| BsiSI | CCGG | 1 cut(s) | 211 |
| BsnI | GGCC | 1 cut(s) | 461 |
| Bsp1286I | GDGCHC | 1 cut(s) | 353 |
| Bsp1407I | TGTACA | 1 cut(s) | 243 |
| Bsp143I | GATC | 2 cut(s) | 213, 384 |
| BspANI | GGCC | 1 cut(s) | 461 |
| BspCNI | CTCAG | 2 cut(s) | 32, 47 |
| BspLI | GGNNCC | 2 cut(s) | 157, 337 |
| BspPI | GGATC | 1 cut(s) | 221 |
| BsrGI | TGTACA | 1 cut(s) | 243 |
| BsrI | ACTGG | 1 cut(s) | 430 |
| BssMI | GATC | 2 cut(s) | 213, 384 |
| BstAUI | TGTACA | 1 cut(s) | 243 |
| BstDEI | CTNAG | 2 cut(s) | 19, 34 |
| BstF5I | GGATG | 3 cut(s) | 39, 90, 403 |
| BstKTI | GATC | 2 cut(s) | 216, 387 |
| BstMBI | GATC | 2 cut(s) | 213, 384 |
| BsuRI | GGCC | 1 cut(s) | 461 |
| BtsCI | GGATG | 3 cut(s) | 39, 90, 403 |
| BtsIMutI | CAGTG | 1 cut(s) | 120 |
| Csp6I | GTAC | 1 cut(s) | 244 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 36, 71 |
| CviJI | RGCY | 9 cut(s) | 65, 80, 174, 198, 223, 249, 407, 439, 461 |
| CviKI_1 | RGCY | 9 cut(s) | 65, 80, 174, 198, 223, 249, 407, 439, 461 |
| CviQI | GTAC | 1 cut(s) | 244 |
| DdeI | CTNAG | 2 cut(s) | 19, 34 |
| DpnI | GATC | 2 cut(s) | 215, 386 |
| DpnII | GATC | 2 cut(s) | 213, 384 |
| EaeI | YGGCCR | 1 cut(s) | 459 |
| FaiI | YATR | 4 cut(s) | 16, 201, 303, 344 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 158, 190 |
| FokI | GGATG | 3 cut(s) | 26, 77, 410 |
| GsaI | CCCAGC | 1 cut(s) | 411 |
| HaeIII | GGCC | 1 cut(s) | 461 |
| HapII | CCGG | 1 cut(s) | 211 |
| HindIII | AAGCTT | 1 cut(s) | 437 |
| HinfI | GANTC | 1 cut(s) | 26 |
| HpaII | CCGG | 1 cut(s) | 211 |
| HphI | GGTGA | 2 cut(s) | 191, 386 |
| Hpy166II | GTNNAC | 2 cut(s) | 30, 244 |
| Hpy188I | TCNGA | 2 cut(s) | 22, 280 |
| Hpy188III | TCNNGA | 2 cut(s) | 74, 163 |
| Hpy8I | GTNNAC | 2 cut(s) | 30, 244 |
| Hpy99I | CGWCG | 1 cut(s) | 221 |
| HpyAV | CCTTC | 4 cut(s) | 131, 176, 257, 412 |
| HpyF3I | CTNAG | 2 cut(s) | 19, 34 |
| Kzo9I | GATC | 2 cut(s) | 213, 384 |
| LmnI | GCTCC | 1 cut(s) | 109 |
| LpnPI | CCDG | 4 cut(s) | 224, 367, 393, 411 |
| LweI | GCATC | 3 cut(s) | 259, 329, 460 |
| MalI | GATC | 2 cut(s) | 215, 386 |
| MboI | GATC | 2 cut(s) | 213, 384 |
| MboII | GAAGA | 1 cut(s) | 178 |
| MhlI | GDGCHC | 1 cut(s) | 353 |
| MlsI | TGGCCA | 1 cut(s) | 461 |
| MluCI | AATT | 1 cut(s) | 129 |
| MluNI | TGGCCA | 1 cut(s) | 461 |
| MlyI | GAGTC | 1 cut(s) | 35 |
| MmeI | TCCRAC | 1 cut(s) | 133 |
| MnlI | CCTC | 6 cut(s) | 43, 98, 140, 326, 385, 388 |
| Mox20I | TGGCCA | 1 cut(s) | 461 |
| MscI | TGGCCA | 1 cut(s) | 461 |
| MseI | TTAA | 2 cut(s) | 309, 402 |
| Msp20I | TGGCCA | 1 cut(s) | 461 |
| MspI | CCGG | 1 cut(s) | 211 |
| NdeII | GATC | 2 cut(s) | 213, 384 |
| NlaIV | GGNNCC | 2 cut(s) | 157, 337 |
| PleI | GAGTC | 1 cut(s) | 34 |
| PpsI | GAGTC | 1 cut(s) | 34 |
| PspFI | CCCAGC | 1 cut(s) | 407 |
| PspN4I | GGNNCC | 2 cut(s) | 157, 337 |
| RsaI | GTAC | 1 cut(s) | 245 |
| RsaNI | GTAC | 1 cut(s) | 244 |
| SaqAI | TTAA | 2 cut(s) | 309, 402 |
| Sau3AI | GATC | 2 cut(s) | 213, 384 |
| SchI | GAGTC | 1 cut(s) | 35 |
| SduI | GDGCHC | 1 cut(s) | 353 |
| SfaNI | GCATC | 3 cut(s) | 259, 329, 460 |
| Sse9I | AATT | 1 cut(s) | 129 |
| TaqI | TCGA | 1 cut(s) | 216 |
| TasI | AATT | 1 cut(s) | 129 |
| TatI | WGTACW | 1 cut(s) | 243 |
| Tru1I | TTAA | 2 cut(s) | 309, 402 |
| Tru9I | TTAA | 2 cut(s) | 309, 402 |
| TscAI | CASTG | 1 cut(s) | 120 |
| TspGWI | ACGGA | 1 cut(s) | 328 |
| TspRI | CASTG | 1 cut(s) | 120 |