Rorug04G0101900

Major allergen Pru

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0000091
Physical Location & Seq
Reverse (-)
15890370 .. 15891743
1374 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0101900.1

Sequence Viewer

Length: 1374 bp
ATGGCAACCGCAGTCGCAGAACTTGTTAGGCTCTCTCTTATTACTTTCCTTTTAACCTCACACACTTTATGCTTAACCGCCAACCCTGCCACAACCTCCACCGTCACAAAACCAAAGCGTTTTGTCACAAAACTCATTCACCATGATTCGGCTTTGTCTCCTTACTATAATCCTAATGCAAGCATCAGAGATATTGTTTCACGCTCAATGAAAAGCTCCGCGGCACGCTTCACATACCTAAAAGCAAAGAGTACTAATGCTTTTGTGATGGACGATACACGTGCTGGTGTTGTTCCGGAGAAGTCTGCAACAGAGTTTATGGCAAATTTCTCATTTGGAGAGCCACCAGTTCCACAGCTTTTGACAATGGATACTGGCAGCGAGTTATTGTGGGTTCAATGCCTGCCTTGCACCAAGTGTTTTAAACAATCCAATCCGATTTTTGATCCTTCCAAGTCCTCCACATACAAAACCTTGCCATGCGCATCTCCCGATTGTATTCTATCGAGCCCTGCTGATAAGTGTGACTTCTCAAACAATTGCAAATTCCTTCAGAAGTACCTTGATGGCACCGCGGCGGCAGGACTTATCGTGACCGAAAAGCTCACCTTCGAGACATCTGACGAAGGGCTTAGCCCCGTCTCCGATGCAGTTTTTGGCTGTGCACATGACAATGTTGCTGCCTACGATGGACAAATAAGTGGAGTACTTGGTCTTGGCCCTTCAAAAATATCTTTGACAACCAAGTTAGGCTCCAAGTTTTCTTATTGCATTGGAAGCATAAGGGACCCTAACTACCCTCACAACCAATTGATCTTCGGTGAGGGTACAAAGATAGAAGGGGCAACAACCCCCCTTCAACTGTACAATGAACTTTACTATCTAACCCTAGAGGGCATCAGCCTCGGTCAGTCCCGCCTCCAAATTGATCCAAAAGTATTCACCAGATCACCATCAGGAACTGGTGGAACGGTCATCGACACCGGAACTACACTAAGCTTCGTGGTTAAAAGTGCATATGATGTACTCAGTGCTGAAGTGCAAAAATTAGCAAACGGAATATTAGAACGTGTCCAAGATCCTGATACGCCCACAGCTCTTTGCTACAAGGGGACAATAGACCGAGACCTTGTTGGTTTTCCAGGTGCAACGTTTCACCTGGCAGGAGGGGTTGATTTGTTTCTGGACAAAACGAGCCTCTTCGAAGTTACTGGTGAGAATGAGTTCTGTTTAGCTGTGCAAATGCCAGAGGGCGAGGGTGAAGATTTGAATGTTATTGGAATTCTGGCACAGCAAAATTATAATGTTGCATATGACCTTGCCGCAAAGAAGGTTTATTTCCAGTACATTGACTGTGAGCTTCTTGAAAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Bet_v_1

Protein Analysis

457

Amino Acids

49.48

Weight (kDa)

5.07

Isoelectric Point (pI)

32.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TAXi_N PF14543 106 - 274 1.4e-43 Xylanase inhibitor N-terminal
Asp PF00026 106 - 158 2.7e-06 Eukaryotic aspartyl protease
TAXi_C PF14541 293 - 448 1.2e-29 Xylanase inhibitor C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000091)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g18830 FvH4_4g18850 FvH4_4g18851 FvH4_4g18990 FvH4_4g19000 FvH4_4g19010 FvH4_4g19020 FvH4_4g19040 FvH4_4g19050 FvH4_4g19060 FvH4_4g19080 FvH4_4g19120 FvH4_4g19170 FvH4_4g19700 FvH4_4g19710 FvH4_5g00780
malus_domestica MD13G1160600.v1.1 MD13G1160700.v1.1 MD13G1160900.v1.1 MD13G1161000.v1.1 MD13G1161100.v1.1 MD13G1161200.v1.1 MD13G1161300.v1.1 MD13G1161400.v1.1 MD16G1159900.v1.1 MD16G1160000.v1.1 MD16G1160100.v1.1 MD16G1160300.v1.1 MD16G1160400.v1.1 MD16G1160500.v1.1 MD16G1160700.v1.1 MD16G1161100.v1.1 MD16G1161200.v1.1 MD16G1161400.v1.1 MD16G1161500.v1.1
prunus_persica Prupe.1G126900_v2.0.a1 Prupe.1G126900_v2.0.a1 Prupe.1G127100_v2.0.a1 Prupe.1G127200_v2.0.a1 Prupe.1G127300_v2.0.a1 Prupe.1G127400_v2.0.a1 Prupe.1G127500_v2.0.a1 Prupe.1G127600_v2.0.a1 Prupe.1G127600_v2.0.a1 Prupe.1G127700_v2.0.a1 Prupe.1G127800_v2.0.a1 Prupe.1G127900_v2.0.a1 Prupe.1G128100_v2.0.a1 Prupe.1G128200_v2.0.a1 Prupe.1G128300_v2.0.a1 Prupe.1G128500_v2.0.a1 Prupe.1G128600_v2.0.a1 Prupe.1G128700_v2.0.a1 Prupe.6G094400_v2.0.a1
pyrus_communis pycom06g07350 pycom08g13110 pycom08g13120 pycom13g13660 pycom13g13680 pycom13g13700 pycom13g13710 pycom13g13730 pycom13g13740 pycom13g13750 pycom13g13760 pycom16g13470 pycom16g13480 pycom16g13540 pycom16g13580 pycom16g13600 pycom16g13650 pycom16g13690
rosa_chinensis RchiOBHm_Chr4g0410071 RchiOBHm_Chr4g0410081 RchiOBHm_Chr4g0410091 RchiOBHm_Chr4g0410251 RchiOBHm_Chr4g0410281 RchiOBHm_Chr4g0410291 RchiOBHm_Chr4g0423641 RchiOBHm_Chr4g0423661 RchiOBHm_Chr4g0423691 RchiOBHm_Chr4g0423701 RchiOBHm_Chr4g0423711 RchiOBHm_Chr4g0423721 RchiOBHm_Chr4g0423881 RchiOBHm_Chr4g0423891 RchiOBHm_Chr4g0423901 RchiOBHm_Chr4g0423911 RchiOBHm_Chr4g0423921 RchiOBHm_Chr4g0423931 RchiOBHm_Chr4g0423941 RchiOBHm_Chr4g0423961 RchiOBHm_Chr4g0423971 RchiOBHm_Chr4g0423991 RchiOBHm_Chr4g0424011 RchiOBHm_Chr4g0424021 RchiOBHm_Chr4g0424031 RchiOBHm_Chr4g0424041 RchiOBHm_Chr4g0424121 RchiOBHm_Chr4g0424131 RchiOBHm_Chr4g0425171 RchiOBHm_Chr4g0425181 RchiOBHm_Chr7g0201401
rosa_laevigata RLG00000003678 RLG00000007393 RLG00000007394 RLG00000007502 RLG00000007503 RLG00000007508 RLG00000007509 RLG00000007510 RLG00000007511 RLG00000007512 RLG00000007514 RLG00000007515 RLG00000007516 RLG00000007517 RLG00000007518 RLG00000007520 RLG00000007521 RLG00000007523 RLG00000007535 RLG00000007536 RLG00000007537 RLG00000007538 RLG00000007539 RLG00000008440 RLG00000008441 RLG00000008491 RLG00000008504
rosa_multiflora Rmu_co8215346.1_g000001 Rmu_sc0000365.1_g000047 Rmu_sc0000365.1_g000054 Rmu_sc0000365.1_g000055 Rmu_sc0000464.1_g000004 Rmu_sc0000464.1_g000005 Rmu_sc0000464.1_g000006 Rmu_sc0000464.1_g000007 Rmu_sc0000464.1_g000009 Rmu_sc0000464.1_g000012 Rmu_sc0000464.1_g000013 Rmu_sc0000464.1_g000015 Rmu_sc0000554.1_g000007 Rmu_sc0001469.1_g000009 Rmu_sc0002111.1_g000036 Rmu_sc0002260.1_g000046 Rmu_sc0002260.1_g000047 Rmu_sc0002260.1_g000064 Rmu_sc0002260.1_g000067 Rmu_sc0002260.1_g000068 Rmu_sc0002260.1_g000069 Rmu_sc0002260.1_g000075 Rmu_sc0002260.1_g000078 Rmu_sc0002260.1_g000079 Rmu_sc0002260.1_g000080 Rmu_sc0002260.1_g000088 Rmu_sc0002260.1_g000090 Rmu_sc0002260.1_g000093 Rmu_sc0002260.1_g000094 Rmu_sc0002260.1_g000096 Rmu_sc0004705.1_g000030 Rmu_sc0006329.1_g000002 Rmu_sc0008373.1_g000005 Rmu_sc0008373.1_g000006 Rmu_sc0008373.1_g000007 Rmu_sc0008373.1_g000009 Rmu_sc0008373.1_g000010 Rmu_sc0013971.1_g000005 Rmu_sc0028704.1_g000001 Rmu_ssc0000420.1_g000042 Rmu_ssc0000420.1_g000043
rosa_roxburghii Rroxscaffold_1G00039420 Rroxscaffold_3G00255320 Rroxscaffold_5G00354650 Rroxscaffold_5G00354670 Rroxscaffold_5G00354680 Rroxscaffold_5G00354770 Rroxscaffold_5G00354780 Rroxscaffold_5G00354840 Rroxscaffold_5G00354850 Rroxscaffold_5G00354880 Rroxscaffold_5G00355060 Rroxscaffold_5G00365850 Rroxscaffold_5G00365860 Rroxscaffold_5G00365880 Rroxscaffold_5G00365980 Rroxscaffold_5G00365990 Rroxscaffold_5G00366000 Rroxscaffold_5G00366010 Rroxscaffold_5G00366030 Rroxscaffold_5G00366040 Rroxscaffold_5G00366110 Rroxscaffold_5G00366120
rosa_rugosa Rorug04G0100900 Rorug04G0100900 Rorug04G0101000 Rorug04G0101000 Rorug04G0101100 Rorug04G0101600 Rorug04G0101700 Rorug04G0101700 Rorug04G0101900 Rorug04G0189300 Rorug04G0189400 Rorug04G0189500 Rorug04G0189500 Rorug04G0189600 Rorug04G0191600 Rorug04G0191800 Rorug04G0191800 Rorug04G0191900 Rorug04G0192000 Rorug04G0192100 Rorug04G0192200 Rorug04G0192300 Rorug04G0192500 Rorug04G0192500 Rorug04G0192600 Rorug04G0192700 Rorug04G0192700 Rorug04G0192700 Rorug04G0193200 Rorug04G0193300 Rorug04G0201800 Rorug04G0201800 Rorug07G0063300.1
rosa_samantha Rh4CG170500 Rh4CG171600 Rh4CG171900 Rh4CG262200 Rh4CG262400 Rh4CG262500 Rh4CG262600 Rh4CG262700 Rh4CG262800 Rh4CG262900 Rh4CG263000 Rh4CG264700 Rh4CG264800 Rh4CG264900 Rh4CG265000 Rh4CG265100 Rh4CG265200 Rh4CG265300 Rh4CG265500 Rh4CG265600 Rh4CG265700 Rh4CG265800 Rh4CG265900 Rh4CG266100 Rh4CG266200 Rh4CG266800 Rh4CG267200 Rh4CG275400 Rh4CG275500 Rh7CG201600
rosa_wichuraiana Rw4G013200 Rw4G013210 Rw4G013220 Rw4G013300 Rw4G021330 Rw4G021340 Rw4G021350 Rw4G021360 Rw4G021370 Rw4G021380 Rw4G021510 Rw4G021530 Rw4G021540 Rw4G021560 Rw4G021570 Rw4G021580 Rw4G021590 Rw4G021600 Rw4G021610 Rw4G021620 Rw4G021630 Rw4G021650 Rw4G021660 Rw4G022390 Rw7G016700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1302
Acc16I TGCGCA 1 cut(s) 484
AccB1I GGYRCC 1 cut(s) 569
AccII CGCG 2 cut(s) 221, 575
AccIII TCCGGA 1 cut(s) 295
AciI CCGC 9 cut(s) 9, 78, 219, 221, 573, 575, 578, 916, 1323
AclI AACGTT 1 cut(s) 1151
AclWI GGATC 3 cut(s) 440, 923, 1073
AcsI RAATTY 3 cut(s) 325, 545, 1281
AcuI CTGAAG 2 cut(s) 536, 1056
AcvI CACGTG 1 cut(s) 281
AdeI CACNNNGTG 1 cut(s) 417
AfaI GTAC 7 cut(s) 253, 560, 708, 829, 866, 1026, 1346
AfiI CCNNNNNNNGG 1 cut(s) 148
AflIII ACRYGT 2 cut(s) 278, 1069
AgsI TTSAA 5 cut(s) 398, 726, 860, 1270, 1367
AjnI CCWGG 2 cut(s) 1141, 1158
AluBI AGCT 7 cut(s) 216, 358, 604, 999, 1097, 1235, 1360
AluI AGCT 7 cut(s) 216, 358, 604, 999, 1097, 1235, 1360
Alw21I GWGCWC 1 cut(s) 667
Alw26I GTCTC 4 cut(s) 162, 608, 646, 1119
Alw44I GTGCAC 1 cut(s) 663
AlwI GGATC 3 cut(s) 440, 923, 1073
AlwNI CAGNNNCTG 1 cut(s) 962
Aor13HI TCCGGA 1 cut(s) 295
AoxI GGCC 1 cut(s) 718
ApaLI GTGCAC 1 cut(s) 663
ApeKI GCWGC 2 cut(s) 378, 680
ApoI RAATTY 3 cut(s) 325, 545, 1281
Asp700I GAANNNNTTC 1 cut(s) 1223
AspLEI GCGC 1 cut(s) 485
AspS9I GGNCC 2 cut(s) 719, 787
AsuHPI GGTGA 8 cut(s) 131, 598, 833, 934, 942, 1148, 1226, 1271
AsuII TTCGAA 1 cut(s) 1203
AvaII GGWCC 1 cut(s) 787
BaeGI GKGCMC 1 cut(s) 667
BanI GGYRCC 1 cut(s) 569
BanII GRGCYC 1 cut(s) 512
BbrPI CACGTG 1 cut(s) 281
Bbv12I GWGCWC 1 cut(s) 667
BbvI GCAGC 2 cut(s) 390, 667
BccI CCATC 4 cut(s) 262, 560, 683, 961
BcgI CGANNNNNNTGC 4 cut(s) 263, 297, 886, 920
BciT130I CCWGG 2 cut(s) 1143, 1160
BciVI GTATCC 1 cut(s) 364
BcoDI GTCTC 4 cut(s) 162, 608, 646, 1119
BfaI CTAG 1 cut(s) 890
BfuI GTATCC 1 cut(s) 364
BisI GCNGC 6 cut(s) 222, 379, 576, 579, 681, 1323
BlpI GCTNAGC 1 cut(s) 632
BlsI GCNGC 6 cut(s) 223, 380, 577, 580, 682, 1324
BmcAI AGTACT 2 cut(s) 253, 708
Bme1390I CCNGG 2 cut(s) 1143, 1160
Bme18I GGWCC 1 cut(s) 787
BmgT120I GGNCC 2 cut(s) 719, 787
BmiI GGNNCC 4 cut(s) 571, 754, 788, 789
BmrFI CCNGG 2 cut(s) 1143, 1160
BmsI GCATC 4 cut(s) 192, 494, 637, 906
Bpu1102I GCTNAGC 1 cut(s) 632
Bpu14I TTCGAA 1 cut(s) 1203
BsaAI YACGTR 1 cut(s) 281
BsaBI GATNNNNATC 1 cut(s) 952
BsaI GGTCTC 1 cut(s) 1119
BsaJI CCNNGG 3 cut(s) 219, 573, 904
BsaWI WCCGGW 2 cut(s) 295, 983
Bsc4I CCNNNNNNNGG 1 cut(s) 148
Bse1I ACTGG 5 cut(s) 347, 379, 967, 1216, 1342
Bse8I GATNNNNATC 1 cut(s) 952
BseAI TCCGGA 1 cut(s) 295
BseBI CCWGG 2 cut(s) 1143, 1160
BseDI CCNNGG 3 cut(s) 219, 573, 904
BseJI GATNNNNATC 1 cut(s) 952
BseLI CCNNNNNNNGG 1 cut(s) 148
BseMII CTCAG 1 cut(s) 1042
BseNI ACTGG 5 cut(s) 347, 379, 967, 1216, 1342
BseSI GKGCMC 1 cut(s) 667
BseXI GCAGC 2 cut(s) 390, 667
Bsh1236I CGCG 2 cut(s) 221, 575
BshFI GGCC 1 cut(s) 720
BshNI GGYRCC 1 cut(s) 569
BsiHKAI GWGCWC 1 cut(s) 667
BsiSI CCGG 2 cut(s) 296, 984
BslFI GGGAC 3 cut(s) 800, 898, 1126
BslI CCNNNNNNNGG 1 cut(s) 148
BsmAI GTCTC 4 cut(s) 162, 608, 646, 1119
BsmBI CGTCTC 1 cut(s) 646
BsmFI GGGAC 3 cut(s) 800, 898, 1126
BsnI GGCC 1 cut(s) 720
Bso31I GGTCTC 1 cut(s) 1119
Bsp119I TTCGAA 1 cut(s) 1203
Bsp1286I GDGCHC 2 cut(s) 512, 667
Bsp13I TCCGGA 1 cut(s) 295
Bsp1407I TGTACA 1 cut(s) 864
Bsp143I GATC 5 cut(s) 445, 813, 928, 947, 1078
Bsp1720I GCTNAGC 1 cut(s) 632
BspACI CCGC 9 cut(s) 9, 78, 219, 221, 573, 575, 578, 916, 1323
BspANI GGCC 1 cut(s) 720
BspCNI CTCAG 1 cut(s) 1041
BspEI TCCGGA 1 cut(s) 295
BspFNI CGCG 2 cut(s) 221, 575
BspLI GGNNCC 4 cut(s) 571, 754, 788, 789
BspPI GGATC 3 cut(s) 440, 923, 1073
BspT104I TTCGAA 1 cut(s) 1203
BspT107I GGYRCC 1 cut(s) 569
BspTNI GGTCTC 1 cut(s) 1119
BsrGI TGTACA 1 cut(s) 864
BsrI ACTGG 5 cut(s) 347, 379, 967, 1216, 1342
BssECI CCNNGG 3 cut(s) 219, 573, 904
BssMI GATC 5 cut(s) 445, 813, 928, 947, 1078
Bst2UI CCWGG 2 cut(s) 1143, 1160
Bst4CI ACNGT 4 cut(s) 103, 864, 973, 1355
Bst6I CTCTTC 1 cut(s) 1205
BstAUI TGTACA 1 cut(s) 864
BstBAI YACGTR 1 cut(s) 281
BstBI TTCGAA 1 cut(s) 1203
BstC8I GCNNGC 3 cut(s) 181, 226, 404
BstDEI CTNAG 3 cut(s) 632, 995, 1028
BstDSI CCRYGG 2 cut(s) 219, 573
BstFNI CGCG 2 cut(s) 221, 575
BstHHI GCGC 1 cut(s) 485
BstKTI GATC 5 cut(s) 448, 816, 931, 950, 1081
BstMAI GTCTC 4 cut(s) 162, 608, 646, 1119
BstMBI GATC 5 cut(s) 445, 813, 928, 947, 1078
BstMWI GCNNNNNNNGC 3 cut(s) 86, 408, 777
BstNI CCWGG 2 cut(s) 1143, 1160
BstSCI CCNGG 2 cut(s) 1141, 1158
BstSLI GKGCMC 1 cut(s) 667
BstUI CGCG 2 cut(s) 221, 575
BstV1I GCAGC 2 cut(s) 390, 667
BstX2I RGATCY 1 cut(s) 1078
BstYI RGATCY 1 cut(s) 1078
BsuI GTATCC 1 cut(s) 364
BsuRI GGCC 1 cut(s) 720
BtgI CCRYGG 2 cut(s) 219, 573
BtsIMutI CAGTG 1 cut(s) 1036
Cac8I GCNNGC 3 cut(s) 181, 226, 404
CaiI CAGNNNCTG 1 cut(s) 962
CfoI GCGC 1 cut(s) 485
Cfr13I GGNCC 2 cut(s) 719, 787
Cfr42I CCGCGG 2 cut(s) 222, 576
Csp6I GTAC 7 cut(s) 252, 559, 707, 828, 865, 1025, 1345
CspCI CAANNNNNGTGG 2 cut(s) 342, 377
CviAII CATG 3 cut(s) 143, 480, 668
CviQI GTAC 7 cut(s) 252, 559, 707, 828, 865, 1025, 1345
DdeI CTNAG 3 cut(s) 632, 995, 1028
DpnI GATC 5 cut(s) 447, 815, 930, 949, 1080
DpnII GATC 5 cut(s) 445, 813, 928, 947, 1078
DraI TTTAAA 1 cut(s) 424
DraIII CACNNNGTG 1 cut(s) 417
Eam1104I CTCTTC 1 cut(s) 1205
EarI CTCTTC 1 cut(s) 1205
Eco24I GRGCYC 1 cut(s) 512
Eco31I GGTCTC 1 cut(s) 1119
Eco47I GGWCC 1 cut(s) 787
Eco57I CTGAAG 2 cut(s) 536, 1056
Eco72I CACGTG 1 cut(s) 281
EcoO109I RGGNCCY 1 cut(s) 787
EcoRI GAATTC 1 cut(s) 1281
EcoRII CCWGG 2 cut(s) 1141, 1158
EcoT38I GRGCYC 1 cut(s) 512
Esp3I CGTCTC 1 cut(s) 646
FaeI CATG 3 cut(s) 146, 483, 671
FalI AAGNNNNNCTT 4 cut(s) 512, 544, 593, 625
FaqI GGGAC 3 cut(s) 800, 898, 1126
FatI CATG 3 cut(s) 142, 479, 667
FauI CCCGC 1 cut(s) 923
FauNDI CATATG 2 cut(s) 1018, 1312
Fnu4HI GCNGC 6 cut(s) 222, 379, 576, 579, 681, 1323
FriOI GRGCYC 1 cut(s) 512
Fsp4HI GCNGC 6 cut(s) 222, 379, 576, 579, 681, 1323
FspAI RTGCGCAY 1 cut(s) 484
FspBI CTAG 1 cut(s) 890
FspI TGCGCA 1 cut(s) 484
GlaI GCGC 1 cut(s) 484
GluI GCNGC 6 cut(s) 222, 379, 576, 579, 681, 1323
HaeIII GGCC 1 cut(s) 720
HapII CCGG 2 cut(s) 296, 984
HhaI GCGC 1 cut(s) 485
Hin1II CATG 3 cut(s) 146, 483, 671
Hin6I GCGC 1 cut(s) 483
HinP1I GCGC 1 cut(s) 483
HindIII AAGCTT 1 cut(s) 997
HinfI GANTC 1 cut(s) 146
HpaII CCGG 2 cut(s) 296, 984
HphI GGTGA 8 cut(s) 131, 598, 833, 934, 942, 1148, 1226, 1271
Hpy166II GTNNAC 1 cut(s) 665
Hpy188I TCNGA 5 cut(s) 188, 438, 555, 622, 646
Hpy188III TCNNGA 8 cut(s) 296, 491, 592, 613, 957, 1082, 1184, 1364
Hpy8I GTNNAC 1 cut(s) 665
HpyAV CCTTC 8 cut(s) 459, 560, 619, 620, 732, 833, 866, 1324
HpyCH4III ACNGT 4 cut(s) 103, 864, 973, 1355
HpyCH4IV ACGT 3 cut(s) 280, 1069, 1151
HpyF10VI GCNNNNNNNGC 3 cut(s) 86, 408, 777
HpyF3I CTNAG 3 cut(s) 632, 995, 1028
HpySE526I ACGT 3 cut(s) 280, 1069, 1151
Hsp92II CATG 3 cut(s) 146, 483, 671
HspAI GCGC 1 cut(s) 483
KflI GGGWCCC 1 cut(s) 787
Kpn2I TCCGGA 1 cut(s) 295
KspI CCGCGG 2 cut(s) 222, 576
Kzo9I GATC 5 cut(s) 445, 813, 928, 947, 1078
LmnI GCTCC 2 cut(s) 221, 758
Lsp1109I GCAGC 2 cut(s) 390, 667
LweI GCATC 4 cut(s) 192, 494, 637, 906
MaeI CTAG 1 cut(s) 890
MaeII ACGT 3 cut(s) 280, 1069, 1151
MaeIII GTNAC 5 cut(s) 103, 124, 524, 592, 1207
MalI GATC 5 cut(s) 447, 815, 930, 949, 1080
MboI GATC 5 cut(s) 445, 813, 928, 947, 1078
MboII GAAGA 3 cut(s) 808, 1192, 1274
MfeI CAATTG 2 cut(s) 538, 809
MflI RGATCY 1 cut(s) 1078
MhlI GDGCHC 2 cut(s) 512, 667
MluCI AATT 9 cut(s) 325, 538, 545, 809, 924, 1046, 1281, 1297, 1369
MroI TCCGGA 1 cut(s) 295
MroXI GAANNNNTTC 1 cut(s) 1223
MseI TTAA 4 cut(s) 53, 74, 423, 1008
MslI CAYNNNNRTG 1 cut(s) 672
MspA1I CMGCKG 2 cut(s) 221, 575
MspI CCGG 2 cut(s) 296, 984
MspR9I CCNGG 2 cut(s) 1143, 1160
MunI CAATTG 2 cut(s) 538, 809
MvaI CCWGG 2 cut(s) 1143, 1160
MvnI CGCG 2 cut(s) 221, 575
MwoI GCNNNNNNNGC 3 cut(s) 86, 408, 777
NdeI CATATG 2 cut(s) 1018, 1312
NdeII GATC 5 cut(s) 445, 813, 928, 947, 1078
NlaIII CATG 3 cut(s) 146, 483, 671
NlaIV GGNNCC 4 cut(s) 571, 754, 788, 789
NmuCI GTSAC 4 cut(s) 103, 124, 524, 592
NsbI TGCGCA 1 cut(s) 484
NspV TTCGAA 1 cut(s) 1203
PdmI GAANNNNTTC 1 cut(s) 1223
PfeI GAWTC 1 cut(s) 146
PkrI GCNGC 6 cut(s) 223, 380, 577, 580, 682, 1324
PmaCI CACGTG 1 cut(s) 281
PmlI CACGTG 1 cut(s) 281
Ppu21I YACGTR 1 cut(s) 281
PpuMI RGGWCCY 1 cut(s) 787
PsiI TTATAA 1 cut(s) 1302
Psp1406I AACGTT 1 cut(s) 1151
Psp5II RGGWCCY 1 cut(s) 787
Psp6I CCWGG 2 cut(s) 1141, 1158
PspCI CACGTG 1 cut(s) 281
PspGI CCWGG 2 cut(s) 1141, 1158
PspN4I GGNNCC 4 cut(s) 571, 754, 788, 789
PspPI GGNCC 2 cut(s) 719, 787
PspPPI RGGWCCY 1 cut(s) 787
PstNI CAGNNNCTG 1 cut(s) 962
PsuI RGATCY 1 cut(s) 1078
RsaI GTAC 7 cut(s) 253, 560, 708, 829, 866, 1026, 1346
RsaNI GTAC 7 cut(s) 252, 559, 707, 828, 865, 1025, 1345
RseI CAYNNNNRTG 1 cut(s) 672
SacII CCGCGG 2 cut(s) 222, 576
SaqAI TTAA 4 cut(s) 53, 74, 423, 1008
SatI GCNGC 6 cut(s) 222, 379, 576, 579, 681, 1323
Sau3AI GATC 5 cut(s) 445, 813, 928, 947, 1078
Sau96I GGNCC 2 cut(s) 719, 787
ScaI AGTACT 2 cut(s) 253, 708
ScrFI CCNGG 2 cut(s) 1143, 1160
SduI GDGCHC 2 cut(s) 512, 667
SfaNI GCATC 4 cut(s) 192, 494, 637, 906
Sfr303I CCGCGG 2 cut(s) 222, 576
SfuI TTCGAA 1 cut(s) 1203
SgrBI CCGCGG 2 cut(s) 222, 576
SinI GGWCC 1 cut(s) 787
SmiMI CAYNNNNRTG 1 cut(s) 672
Sse9I AATT 9 cut(s) 325, 538, 545, 809, 924, 1046, 1281, 1297, 1369
SsiI CCGC 9 cut(s) 9, 78, 219, 221, 573, 575, 578, 916, 1323
SspI AATATT 1 cut(s) 1062
SspMI CTAG 1 cut(s) 890
StyD4I CCNGG 2 cut(s) 1141, 1158
TaaI ACNGT 4 cut(s) 103, 864, 973, 1355
TaiI ACGT 3 cut(s) 283, 1072, 1154
TaqI TCGA 4 cut(s) 506, 612, 978, 1203
TaqII GACCGA 3 cut(s) 611, 896, 1137
TasI AATT 9 cut(s) 325, 538, 545, 809, 924, 1046, 1281, 1297, 1369
TatI WGTACW 5 cut(s) 251, 706, 864, 1024, 1344
TauI GCSGC 4 cut(s) 224, 578, 581, 1325
TfiI GAWTC 1 cut(s) 146
Tru1I TTAA 4 cut(s) 53, 74, 423, 1008
Tru9I TTAA 4 cut(s) 53, 74, 423, 1008
TscAI CASTG 1 cut(s) 1036
TseFI GTSAC 4 cut(s) 103, 124, 524, 592
TseI GCWGC 2 cut(s) 378, 680
Tsp45I GTSAC 4 cut(s) 103, 124, 524, 592
TspDTI ATGAA 2 cut(s) 224, 885
TspGWI ACGGA 1 cut(s) 1071
TspRI CASTG 1 cut(s) 1036
VneI GTGCAC 1 cut(s) 663
VpaK11BI GGWCC 1 cut(s) 787
XapI RAATTY 3 cut(s) 325, 545, 1281
XmnI GAANNNNTTC 1 cut(s) 1223
XspI CTAG 1 cut(s) 890
ZrmI AGTACT 2 cut(s) 253, 708
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.