Major allergen Pru
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Bet_v_1 | PF00407 | 11 - 106 | 5.2e-13 | Pathogenesis-related protein Bet v 1 family |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 251 |
| AciI | CCGC | 1 cut(s) | 48 |
| AclWI | GGATC | 1 cut(s) | 49 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 286, 352 |
| AgsI | TTSAA | 2 cut(s) | 62, 352 |
| AjiI | CACGTC | 1 cut(s) | 316 |
| AluBI | AGCT | 4 cut(s) | 123, 174, 194, 338 |
| AluI | AGCT | 4 cut(s) | 123, 174, 194, 338 |
| Alw21I | GWGCWC | 3 cut(s) | 196, 269, 315 |
| Alw26I | GTCTC | 1 cut(s) | 218 |
| AlwI | GGATC | 1 cut(s) | 49 |
| AoxI | GGCC | 1 cut(s) | 321 |
| AsuC2I | CCSGG | 1 cut(s) | 325 |
| AsuHPI | GGTGA | 3 cut(s) | 88, 302, 335 |
| BanI | GGYRCC | 1 cut(s) | 251 |
| BanII | GRGCYC | 1 cut(s) | 196 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 203, 235 |
| Bbv12I | GWGCWC | 3 cut(s) | 196, 269, 315 |
| BccI | CCATC | 3 cut(s) | 62, 92, 263 |
| BcnI | CCSGG | 1 cut(s) | 325 |
| BcoDI | GTCTC | 1 cut(s) | 218 |
| BfmI | CTRYAG | 2 cut(s) | 169, 175 |
| BglII | AGATCT | 1 cut(s) | 213 |
| Bme1390I | CCNGG | 1 cut(s) | 325 |
| BmgBI | CACGTC | 1 cut(s) | 316 |
| BmiI | GGNNCC | 2 cut(s) | 82, 253 |
| BmrFI | CCNGG | 1 cut(s) | 325 |
| BmsI | GCATC | 1 cut(s) | 248 |
| BpuMI | CCSGG | 1 cut(s) | 325 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 286, 352 |
| Bse1I | ACTGG | 1 cut(s) | 270 |
| BseGI | GGATG | 2 cut(s) | 14, 239 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 286, 352 |
| BseMII | CTCAG | 1 cut(s) | 42 |
| BseNI | ACTGG | 1 cut(s) | 270 |
| BshFI | GGCC | 1 cut(s) | 323 |
| BshNI | GGYRCC | 1 cut(s) | 251 |
| BsiHKAI | GWGCWC | 3 cut(s) | 196, 269, 315 |
| BsiSI | CCGG | 2 cut(s) | 243, 324 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 286, 352 |
| BsmAI | GTCTC | 1 cut(s) | 218 |
| BsnI | GGCC | 1 cut(s) | 323 |
| Bsp1286I | GDGCHC | 3 cut(s) | 196, 269, 315 |
| Bsp143I | GATC | 4 cut(s) | 54, 93, 213, 300 |
| BspACI | CCGC | 1 cut(s) | 48 |
| BspANI | GGCC | 1 cut(s) | 323 |
| BspCNI | CTCAG | 1 cut(s) | 43 |
| BspLI | GGNNCC | 2 cut(s) | 82, 253 |
| BspPI | GGATC | 1 cut(s) | 49 |
| BspQI | GCTCTTC | 1 cut(s) | 303 |
| BspT107I | GGYRCC | 1 cut(s) | 251 |
| BsrI | ACTGG | 1 cut(s) | 270 |
| BssMI | GATC | 4 cut(s) | 54, 93, 213, 300 |
| Bst6I | CTCTTC | 2 cut(s) | 303, 353 |
| BstDEI | CTNAG | 2 cut(s) | 51, 228 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 350 |
| BstF5I | GGATG | 2 cut(s) | 14, 239 |
| BstKTI | GATC | 4 cut(s) | 57, 96, 216, 303 |
| BstMAI | GTCTC | 1 cut(s) | 218 |
| BstMBI | GATC | 4 cut(s) | 54, 93, 213, 300 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 111, 120 |
| BstSCI | CCNGG | 1 cut(s) | 323 |
| BstSFI | CTRYAG | 2 cut(s) | 169, 175 |
| BstX2I | RGATCY | 2 cut(s) | 54, 213 |
| BstYI | RGATCY | 2 cut(s) | 54, 213 |
| BsuRI | GGCC | 1 cut(s) | 323 |
| BtrI | CACGTC | 1 cut(s) | 316 |
| BtsCI | GGATG | 2 cut(s) | 14, 239 |
| BtsI | GCAGTG | 1 cut(s) | 253 |
| BtsIMutI | CAGTG | 2 cut(s) | 253, 277 |
| CviAII | CATG | 1 cut(s) | 281 |
| CviJI | RGCY | 5 cut(s) | 123, 174, 194, 323, 338 |
| CviKI_1 | RGCY | 5 cut(s) | 123, 174, 194, 323, 338 |
| DdeI | CTNAG | 2 cut(s) | 51, 228 |
| DpnI | GATC | 4 cut(s) | 56, 95, 215, 302 |
| DpnII | GATC | 4 cut(s) | 54, 93, 213, 300 |
| Eam1104I | CTCTTC | 2 cut(s) | 303, 353 |
| EarI | CTCTTC | 2 cut(s) | 303, 353 |
| Ecl136II | GAGCTC | 1 cut(s) | 194 |
| Eco24I | GRGCYC | 1 cut(s) | 196 |
| Eco53kI | GAGCTC | 1 cut(s) | 194 |
| EcoICRI | GAGCTC | 1 cut(s) | 194 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 350 |
| EcoT38I | GRGCYC | 1 cut(s) | 196 |
| FaeI | CATG | 1 cut(s) | 284 |
| FaiI | YATR | 3 cut(s) | 126, 177, 282 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 83, 115, 146, 178 |
| FatI | CATG | 1 cut(s) | 280 |
| FokI | GGATG | 1 cut(s) | 226 |
| FriOI | GRGCYC | 1 cut(s) | 196 |
| HaeIII | GGCC | 1 cut(s) | 323 |
| HapII | CCGG | 2 cut(s) | 243, 324 |
| Hin1II | CATG | 1 cut(s) | 284 |
| HindIII | AAGCTT | 1 cut(s) | 336 |
| HinfI | GANTC | 1 cut(s) | 200 |
| HpaII | CCGG | 2 cut(s) | 243, 324 |
| HphI | GGTGA | 3 cut(s) | 88, 302, 335 |
| Hpy188III | TCNNGA | 3 cut(s) | 88, 197, 262 |
| HpyAV | CCTTC | 3 cut(s) | 56, 101, 109 |
| HpyCH4IV | ACGT | 1 cut(s) | 315 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 111, 120 |
| HpyF3I | CTNAG | 2 cut(s) | 51, 228 |
| HpySE526I | ACGT | 1 cut(s) | 315 |
| Hsp92II | CATG | 1 cut(s) | 284 |
| Kzo9I | GATC | 4 cut(s) | 54, 93, 213, 300 |
| LguI | GCTCTTC | 1 cut(s) | 303 |
| LmnI | GCTCC | 2 cut(s) | 191, 199 |
| LpnPI | CCDG | 5 cut(s) | 20, 63, 256, 283, 337 |
| LweI | GCATC | 1 cut(s) | 248 |
| MaeII | ACGT | 1 cut(s) | 315 |
| MalI | GATC | 4 cut(s) | 56, 95, 215, 302 |
| MboI | GATC | 4 cut(s) | 54, 93, 213, 300 |
| MboII | GAAGA | 4 cut(s) | 103, 223, 320, 340 |
| MfeI | CAATTG | 1 cut(s) | 204 |
| MflI | RGATCY | 2 cut(s) | 54, 213 |
| MhlI | GDGCHC | 3 cut(s) | 196, 269, 315 |
| MluCI | AATT | 2 cut(s) | 138, 204 |
| MlyI | GAGTC | 1 cut(s) | 194 |
| MnlI | CCTC | 3 cut(s) | 22, 181, 356 |
| MseI | TTAA | 1 cut(s) | 42 |
| MspA1I | CMGCKG | 1 cut(s) | 50 |
| MspI | CCGG | 2 cut(s) | 243, 324 |
| MspR9I | CCNGG | 1 cut(s) | 325 |
| MunI | CAATTG | 1 cut(s) | 204 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 111, 120 |
| NciI | CCSGG | 1 cut(s) | 325 |
| NdeII | GATC | 4 cut(s) | 54, 93, 213, 300 |
| NlaIII | CATG | 1 cut(s) | 284 |
| NlaIV | GGNNCC | 2 cut(s) | 82, 253 |
| PciSI | GCTCTTC | 1 cut(s) | 303 |
| PleI | GAGTC | 1 cut(s) | 194 |
| PpsI | GAGTC | 1 cut(s) | 194 |
| Psp124BI | GAGCTC | 1 cut(s) | 196 |
| PspN4I | GGNNCC | 2 cut(s) | 82, 253 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 152, 184 |
| PsuI | RGATCY | 2 cut(s) | 54, 213 |
| SacI | GAGCTC | 1 cut(s) | 196 |
| SapI | GCTCTTC | 1 cut(s) | 303 |
| SaqAI | TTAA | 1 cut(s) | 42 |
| Sau3AI | GATC | 4 cut(s) | 54, 93, 213, 300 |
| SchI | GAGTC | 1 cut(s) | 194 |
| ScrFI | CCNGG | 1 cut(s) | 325 |
| SduI | GDGCHC | 3 cut(s) | 196, 269, 315 |
| SfaNI | GCATC | 1 cut(s) | 248 |
| SfcI | CTRYAG | 2 cut(s) | 169, 175 |
| Sse9I | AATT | 2 cut(s) | 138, 204 |
| SsiI | CCGC | 1 cut(s) | 48 |
| SstI | GAGCTC | 1 cut(s) | 196 |
| StyD4I | CCNGG | 1 cut(s) | 323 |
| TaiI | ACGT | 1 cut(s) | 318 |
| TasI | AATT | 2 cut(s) | 138, 204 |
| Tru1I | TTAA | 1 cut(s) | 42 |
| Tru9I | TTAA | 1 cut(s) | 42 |
| TscAI | CASTG | 2 cut(s) | 253, 277 |
| TspRI | CASTG | 2 cut(s) | 253, 277 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 350 |