Rorug04G0191900

Major allergen Pru

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0000091
Physical Location & Seq
Forward (+)
33490546 .. 33492012
1467 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0191900.1

Sequence Viewer

Length: 1467 bp
ATGGGGGCGTTGTCGTTGCCTTTCTCATCGCAAAACTTCTTGCCCATTACTTCTGTCAGTTCTGACTTCTTTCCTTGGAATCCTCGCTTATTTGAAGTCAGCAGAAATCATAACAACAACAGTAAGACCAAAAATATCTCTTTTCCTGTTTCTTGCTCATCTGTCAAAACTGTGCGTAGTCCTTCACTAGACAGGCATGTTGTGAAACAGAACAAGATACGGTTTGTCCTGAAGTTACAAACACTGCTCCTTTCCAAACCAAGATGCTATATTCCGCTTCAGATTCTTAATAAATGTCGATCCTACCTTTCCCTATCAAAGCCCCGGTCCATCCTTTCAATGATCCATCGTTACCCTACCATTTTTGAGGTCTTCTCAATACCAACAGCACCCATGCCATTCAATGCGTCCAAGTCATTATCACAACTCTGTGTCCGTCTAACCCCAGCTGCAGCAGCGCTTGCTGCTCAGGAATCAACTCTTAAATCAGCCATCTCTGACTCCTTGGCTACCAAACTCCAGAAACTTCTTATGCTTTCTTCTCATCACCGGCTAGTTCTGTCAAAGTTGGTTCACCTTGGTCCAGATCTTGGTCTTCACCCTAATTTTCGGTCTCGTCTCTGCAATGACCATCCAGAAAAATTCAAGACTATTGATACCTCCTACGGCCGTGCACTTGAGCTTGTATCCTGGGACCAAGACTTGGCAAAACCTTTACCGCCTCCAGAAGTTCAATCACGTGGGCTGATAGTAGACAGGCCTTTGAAGTTCAAGCATTTGAATCTTCGGAAGGGTCTGAATCTGAAGAGGCGACACCAAGACTTTTTGATGAGATTTAGAGAAATTCCAGATGTGTGCCCTTACAATACCCCTGCCTCGGAATTGCCAAAAGAGTCAATTGAGGCAGAGAAAAGAGCTTGTTTGGTGGTGAGAGAAATGCTAGCGATGATGGTTGAAAAGAGAACATTAATAGACCACTTAACACATTTTAGAAAAGAGTTTGGTCTGCCCAACAAGTTGAGAGGGATGATTGTGAGGCACCCTGAGTTATTCTATGTGAGCTTGAAAGGGCAGAGGGATTCTGTATTCCTGGTGGAGGGCTATGATGAGAATGGTTCACTTTTAGACAAGAAGAAAGAAACTTTGGTGATAAAGGAAAAGTTGATGGAGTTGGTCAGGGAAAGCAAGAGGTTGAGAAAAGAGAGGAGGAAAGCTCGCCTTAATAACACAAGGATTGATGACTGTAATGGTGATAATAGTGATGATGAAGATGATGATGATGATGATGATGATGATTATTATGATGATGGCTTCCTGGATTTGTTTGAGTCTGAGGATCTGTATTTGGATGACATTGGTGATGATAAAAGTGAGACACTAAATTACAGGCAGAATGGTGAGTTTTGGACTGCAGATGCTTGTTCTGATGTTGAAGGCAGAGATGGGCAACATTTGGAGCCTTGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Bet_v_1

Protein Analysis

488

Amino Acids

56.13

Weight (kDa)

8.42

Isoelectric Point (pI)

43.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PORR PF11955 58 - 396 1.5e-95 Plant organelle RNA recognition domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000091)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g18830 FvH4_4g18850 FvH4_4g18851 FvH4_4g18990 FvH4_4g19000 FvH4_4g19010 FvH4_4g19020 FvH4_4g19040 FvH4_4g19050 FvH4_4g19060 FvH4_4g19080 FvH4_4g19120 FvH4_4g19170 FvH4_4g19700 FvH4_4g19710 FvH4_5g00780
malus_domestica MD13G1160600.v1.1 MD13G1160700.v1.1 MD13G1160900.v1.1 MD13G1161000.v1.1 MD13G1161100.v1.1 MD13G1161200.v1.1 MD13G1161300.v1.1 MD13G1161400.v1.1 MD16G1159900.v1.1 MD16G1160000.v1.1 MD16G1160100.v1.1 MD16G1160300.v1.1 MD16G1160400.v1.1 MD16G1160500.v1.1 MD16G1160700.v1.1 MD16G1161100.v1.1 MD16G1161200.v1.1 MD16G1161400.v1.1 MD16G1161500.v1.1
prunus_persica Prupe.1G126900_v2.0.a1 Prupe.1G126900_v2.0.a1 Prupe.1G127100_v2.0.a1 Prupe.1G127200_v2.0.a1 Prupe.1G127300_v2.0.a1 Prupe.1G127400_v2.0.a1 Prupe.1G127500_v2.0.a1 Prupe.1G127600_v2.0.a1 Prupe.1G127600_v2.0.a1 Prupe.1G127700_v2.0.a1 Prupe.1G127800_v2.0.a1 Prupe.1G127900_v2.0.a1 Prupe.1G128100_v2.0.a1 Prupe.1G128200_v2.0.a1 Prupe.1G128300_v2.0.a1 Prupe.1G128500_v2.0.a1 Prupe.1G128600_v2.0.a1 Prupe.1G128700_v2.0.a1 Prupe.6G094400_v2.0.a1
pyrus_communis pycom06g07350 pycom08g13110 pycom08g13120 pycom13g13660 pycom13g13680 pycom13g13700 pycom13g13710 pycom13g13730 pycom13g13740 pycom13g13750 pycom13g13760 pycom16g13470 pycom16g13480 pycom16g13540 pycom16g13580 pycom16g13600 pycom16g13650 pycom16g13690
rosa_chinensis RchiOBHm_Chr4g0410071 RchiOBHm_Chr4g0410081 RchiOBHm_Chr4g0410091 RchiOBHm_Chr4g0410251 RchiOBHm_Chr4g0410281 RchiOBHm_Chr4g0410291 RchiOBHm_Chr4g0423641 RchiOBHm_Chr4g0423661 RchiOBHm_Chr4g0423691 RchiOBHm_Chr4g0423701 RchiOBHm_Chr4g0423711 RchiOBHm_Chr4g0423721 RchiOBHm_Chr4g0423881 RchiOBHm_Chr4g0423891 RchiOBHm_Chr4g0423901 RchiOBHm_Chr4g0423911 RchiOBHm_Chr4g0423921 RchiOBHm_Chr4g0423931 RchiOBHm_Chr4g0423941 RchiOBHm_Chr4g0423961 RchiOBHm_Chr4g0423971 RchiOBHm_Chr4g0423991 RchiOBHm_Chr4g0424011 RchiOBHm_Chr4g0424021 RchiOBHm_Chr4g0424031 RchiOBHm_Chr4g0424041 RchiOBHm_Chr4g0424121 RchiOBHm_Chr4g0424131 RchiOBHm_Chr4g0425171 RchiOBHm_Chr4g0425181 RchiOBHm_Chr7g0201401
rosa_laevigata RLG00000003678 RLG00000007393 RLG00000007394 RLG00000007502 RLG00000007503 RLG00000007508 RLG00000007509 RLG00000007510 RLG00000007511 RLG00000007512 RLG00000007514 RLG00000007515 RLG00000007516 RLG00000007517 RLG00000007518 RLG00000007520 RLG00000007521 RLG00000007523 RLG00000007535 RLG00000007536 RLG00000007537 RLG00000007538 RLG00000007539 RLG00000008440 RLG00000008441 RLG00000008491 RLG00000008504
rosa_multiflora Rmu_co8215346.1_g000001 Rmu_sc0000365.1_g000047 Rmu_sc0000365.1_g000054 Rmu_sc0000365.1_g000055 Rmu_sc0000464.1_g000004 Rmu_sc0000464.1_g000005 Rmu_sc0000464.1_g000006 Rmu_sc0000464.1_g000007 Rmu_sc0000464.1_g000009 Rmu_sc0000464.1_g000012 Rmu_sc0000464.1_g000013 Rmu_sc0000464.1_g000015 Rmu_sc0000554.1_g000007 Rmu_sc0001469.1_g000009 Rmu_sc0002111.1_g000036 Rmu_sc0002260.1_g000046 Rmu_sc0002260.1_g000047 Rmu_sc0002260.1_g000064 Rmu_sc0002260.1_g000067 Rmu_sc0002260.1_g000068 Rmu_sc0002260.1_g000069 Rmu_sc0002260.1_g000075 Rmu_sc0002260.1_g000078 Rmu_sc0002260.1_g000079 Rmu_sc0002260.1_g000080 Rmu_sc0002260.1_g000088 Rmu_sc0002260.1_g000090 Rmu_sc0002260.1_g000093 Rmu_sc0002260.1_g000094 Rmu_sc0002260.1_g000096 Rmu_sc0004705.1_g000030 Rmu_sc0006329.1_g000002 Rmu_sc0008373.1_g000005 Rmu_sc0008373.1_g000006 Rmu_sc0008373.1_g000007 Rmu_sc0008373.1_g000009 Rmu_sc0008373.1_g000010 Rmu_sc0013971.1_g000005 Rmu_sc0028704.1_g000001 Rmu_ssc0000420.1_g000042 Rmu_ssc0000420.1_g000043
rosa_roxburghii Rroxscaffold_1G00039420 Rroxscaffold_3G00255320 Rroxscaffold_5G00354650 Rroxscaffold_5G00354670 Rroxscaffold_5G00354680 Rroxscaffold_5G00354770 Rroxscaffold_5G00354780 Rroxscaffold_5G00354840 Rroxscaffold_5G00354850 Rroxscaffold_5G00354880 Rroxscaffold_5G00355060 Rroxscaffold_5G00365850 Rroxscaffold_5G00365860 Rroxscaffold_5G00365880 Rroxscaffold_5G00365980 Rroxscaffold_5G00365990 Rroxscaffold_5G00366000 Rroxscaffold_5G00366010 Rroxscaffold_5G00366030 Rroxscaffold_5G00366040 Rroxscaffold_5G00366110 Rroxscaffold_5G00366120
rosa_rugosa Rorug04G0100900 Rorug04G0100900 Rorug04G0101000 Rorug04G0101000 Rorug04G0101100 Rorug04G0101600 Rorug04G0101700 Rorug04G0101700 Rorug04G0101900 Rorug04G0189300 Rorug04G0189400 Rorug04G0189500 Rorug04G0189500 Rorug04G0189600 Rorug04G0191600 Rorug04G0191800 Rorug04G0191800 Rorug04G0191900 Rorug04G0192000 Rorug04G0192100 Rorug04G0192200 Rorug04G0192300 Rorug04G0192500 Rorug04G0192500 Rorug04G0192600 Rorug04G0192700 Rorug04G0192700 Rorug04G0192700 Rorug04G0193200 Rorug04G0193300 Rorug04G0201800 Rorug04G0201800 Rorug07G0063300.1
rosa_samantha Rh4CG170500 Rh4CG171600 Rh4CG171900 Rh4CG262200 Rh4CG262400 Rh4CG262500 Rh4CG262600 Rh4CG262700 Rh4CG262800 Rh4CG262900 Rh4CG263000 Rh4CG264700 Rh4CG264800 Rh4CG264900 Rh4CG265000 Rh4CG265100 Rh4CG265200 Rh4CG265300 Rh4CG265500 Rh4CG265600 Rh4CG265700 Rh4CG265800 Rh4CG265900 Rh4CG266100 Rh4CG266200 Rh4CG266800 Rh4CG267200 Rh4CG275400 Rh4CG275500 Rh7CG201600
rosa_wichuraiana Rw4G013200 Rw4G013210 Rw4G013220 Rw4G013300 Rw4G021330 Rw4G021340 Rw4G021350 Rw4G021360 Rw4G021370 Rw4G021380 Rw4G021510 Rw4G021530 Rw4G021540 Rw4G021560 Rw4G021570 Rw4G021580 Rw4G021590 Rw4G021600 Rw4G021610 Rw4G021620 Rw4G021630 Rw4G021650 Rw4G021660 Rw4G022390 Rw7G016700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1038
AccB7I CCANNNNNTGG 2 cut(s) 590, 703
AccI GTMKAC 1 cut(s) 753
AciI CCGC 2 cut(s) 275, 719
AclWI GGATC 3 cut(s) 294, 337, 1344
AcoI YGGCCR 1 cut(s) 667
AcsI RAATTY 2 cut(s) 641, 843
AcuI CTGAAG 3 cut(s) 251, 263, 824
AcvI CACGTG 1 cut(s) 740
AfeI AGCGCT 1 cut(s) 459
AfiI CCNNNNNNNGG 4 cut(s) 590, 703, 877, 1096
AjnI CCWGG 3 cut(s) 689, 1089, 1314
AjuI GAANNNNNNNTTGG 2 cut(s) 1127, 1159
AluBI AGCT 5 cut(s) 449, 682, 917, 1062, 1214
AluI AGCT 5 cut(s) 449, 682, 917, 1062, 1214
Alw21I GWGCWC 1 cut(s) 676
Alw26I GTCTC 3 cut(s) 618, 623, 1367
Alw44I GTGCAC 1 cut(s) 672
AlwI GGATC 3 cut(s) 294, 337, 1344
Aor51HI AGCGCT 1 cut(s) 459
AoxI GGCC 2 cut(s) 667, 758
ApaLI GTGCAC 1 cut(s) 672
ApeKI GCWGC 4 cut(s) 449, 452, 455, 464
ApoI RAATTY 2 cut(s) 641, 843
ArsI GACNNNNNNTTYG 2 cut(s) 311, 343
AseI ATTAAT 1 cut(s) 968
AspLEI GCGC 1 cut(s) 460
AspS9I GGNCC 3 cut(s) 327, 581, 694
AsuC2I CCSGG 1 cut(s) 325
AsuHPI GGTGA 8 cut(s) 539, 566, 590, 940, 1159, 1262, 1370, 1409
AsuNHI GCTAGC 1 cut(s) 940
AvaII GGWCC 3 cut(s) 327, 581, 694
BaeGI GKGCMC 2 cut(s) 676, 860
BanI GGYRCC 1 cut(s) 1038
BbrPI CACGTG 1 cut(s) 740
BbsI GAAGAC 2 cut(s) 364, 587
Bbv12I GWGCWC 1 cut(s) 676
BbvI GCAGC 4 cut(s) 436, 451, 464, 467
BccI CCATC 8 cut(s) 338, 354, 500, 639, 943, 1159, 1301, 1436
BceAI ACGGC 2 cut(s) 654, 682
BciT130I CCWGG 3 cut(s) 691, 1091, 1316
BciVI GTATCC 1 cut(s) 697
BcnI CCSGG 1 cut(s) 325
BcoDI GTCTC 3 cut(s) 618, 623, 1367
BfaI CTAG 3 cut(s) 188, 554, 941
BfmI CTRYAG 2 cut(s) 450, 1410
BfoI RGCGCY 1 cut(s) 461
BfuI GTATCC 1 cut(s) 697
BglII AGATCT 1 cut(s) 586
BisI GCNGC 4 cut(s) 450, 453, 456, 465
BlsI GCNGC 4 cut(s) 451, 454, 457, 466
Bme1390I CCNGG 4 cut(s) 325, 691, 1091, 1316
Bme18I GGWCC 3 cut(s) 327, 581, 694
BmgT120I GGNCC 3 cut(s) 327, 581, 694
BmiI GGNNCC 3 cut(s) 695, 1040, 1458
BmrFI CCNGG 4 cut(s) 325, 691, 1091, 1316
BmsI GCATC 2 cut(s) 254, 1405
BmtI GCTAGC 1 cut(s) 944
BpiI GAAGAC 2 cut(s) 364, 587
BplI GAGNNNNNCTC 4 cut(s) 359, 391, 1198, 1230
BpmI CTGGAG 2 cut(s) 503, 708
Bpu10I CCTNAGC 1 cut(s) 468
BpuEI CTTGAG 1 cut(s) 698
BpuMI CCSGG 1 cut(s) 325
BsaAI YACGTR 1 cut(s) 740
BsaI GGTCTC 1 cut(s) 618
BsaJI CCNNGG 7 cut(s) 74, 323, 504, 577, 690, 876, 1460
BsaXI ACNNNNNCTCC 1 cut(s) 1448
Bsc4I CCNNNNNNNGG 4 cut(s) 590, 703, 877, 1096
Bse118I RCCGGY 1 cut(s) 549
Bse3DI GCAATG 1 cut(s) 631
BseBI CCWGG 3 cut(s) 691, 1091, 1316
BseDI CCNNGG 7 cut(s) 74, 323, 504, 577, 690, 876, 1460
BseGI GGATG 4 cut(s) 330, 631, 1032, 1354
BseLI CCNNNNNNNGG 4 cut(s) 590, 703, 877, 1096
BseMI GCAATG 1 cut(s) 631
BseMII CTCAG 3 cut(s) 482, 1035, 1323
BseRI GAGGAG 1 cut(s) 1219
BseSI GKGCMC 2 cut(s) 676, 860
BseX3I CGGCCG 1 cut(s) 667
BseXI GCAGC 4 cut(s) 436, 451, 464, 467
BseYI CCCAGC 1 cut(s) 445
Bsh1285I CGRYCG 1 cut(s) 670
BshFI GGCC 2 cut(s) 669, 760
BshNI GGYRCC 1 cut(s) 1038
BsiEI CGRYCG 1 cut(s) 670
BsiHKAI GWGCWC 1 cut(s) 676
BsiSI CCGG 2 cut(s) 325, 550
BslFI GGGAC 1 cut(s) 707
BslI CCNNNNNNNGG 4 cut(s) 590, 703, 877, 1096
BsmAI GTCTC 3 cut(s) 618, 623, 1367
BsmBI CGTCTC 1 cut(s) 623
BsmFI GGGAC 1 cut(s) 707
BsnI GGCC 2 cut(s) 669, 760
Bso31I GGTCTC 1 cut(s) 618
Bsp1286I GDGCHC 2 cut(s) 676, 860
Bsp143I GATC 4 cut(s) 299, 342, 586, 1336
BspACI CCGC 2 cut(s) 275, 719
BspANI GGCC 2 cut(s) 669, 760
BspCNI CTCAG 3 cut(s) 481, 1036, 1324
BspLI GGNNCC 3 cut(s) 695, 1040, 1458
BspMAI CTGCAG 2 cut(s) 454, 1414
BspOI GCTAGC 1 cut(s) 944
BspPI GGATC 3 cut(s) 294, 337, 1344
BspT107I GGYRCC 1 cut(s) 1038
BspTNI GGTCTC 1 cut(s) 618
BsrDI GCAATG 1 cut(s) 631
BsrFI RCCGGY 1 cut(s) 549
BssAI RCCGGY 1 cut(s) 549
BssECI CCNNGG 7 cut(s) 74, 323, 504, 577, 690, 876, 1460
BssMI GATC 4 cut(s) 299, 342, 586, 1336
BssT1I CCWWGG 4 cut(s) 74, 504, 577, 1460
Bst2UI CCWGG 3 cut(s) 691, 1091, 1316
Bst4CI ACNGT 4 cut(s) 122, 172, 222, 1244
Bst6I CTCTTC 1 cut(s) 800
BstAPI GCANNNNNTGC 1 cut(s) 461
BstBAI YACGTR 1 cut(s) 740
BstC8I GCNNGC 3 cut(s) 462, 942, 1216
BstDEI CTNAG 3 cut(s) 468, 1044, 1332
BstENI CCTNNNNNAGG 1 cut(s) 1094
BstF5I GGATG 4 cut(s) 330, 631, 1032, 1354
BstH2I RGCGCY 1 cut(s) 461
BstHHI GCGC 1 cut(s) 460
BstKTI GATC 4 cut(s) 302, 345, 589, 1339
BstMAI GTCTC 3 cut(s) 618, 623, 1367
BstMBI GATC 4 cut(s) 299, 342, 586, 1336
BstMCI CGRYCG 1 cut(s) 670
BstMWI GCNNNNNNNGC 3 cut(s) 455, 461, 464
BstNI CCWGG 3 cut(s) 691, 1091, 1316
BstNSI RCATGY 1 cut(s) 200
BstSCI CCNGG 4 cut(s) 323, 689, 1089, 1314
BstSFI CTRYAG 2 cut(s) 450, 1410
BstSLI GKGCMC 2 cut(s) 676, 860
BstV1I GCAGC 4 cut(s) 436, 451, 464, 467
BstV2I GAAGAC 2 cut(s) 364, 587
BstX2I RGATCY 2 cut(s) 586, 1336
BstYI RGATCY 2 cut(s) 586, 1336
BstZI CGGCCG 1 cut(s) 667
BsuI GTATCC 1 cut(s) 697
BsuRI GGCC 2 cut(s) 669, 760
BtgZI GCGATG 2 cut(s) 12, 959
BtsCI GGATG 4 cut(s) 330, 631, 1032, 1354
BtsI GCAGTG 1 cut(s) 242
BtsIMutI CAGTG 1 cut(s) 242
Cac8I GCNNGC 3 cut(s) 462, 942, 1216
CfoI GCGC 1 cut(s) 460
Cfr10I RCCGGY 1 cut(s) 549
Cfr13I GGNCC 3 cut(s) 327, 581, 694
CseI GACGC 1 cut(s) 396
CviAII CATG 2 cut(s) 197, 394
DdeI CTNAG 3 cut(s) 468, 1044, 1332
DpnI GATC 4 cut(s) 301, 344, 588, 1338
DpnII GATC 4 cut(s) 299, 342, 586, 1336
EaeI YGGCCR 1 cut(s) 667
EagI CGGCCG 1 cut(s) 667
Eam1104I CTCTTC 1 cut(s) 800
EarI CTCTTC 1 cut(s) 800
EclXI CGGCCG 1 cut(s) 667
Eco130I CCWWGG 4 cut(s) 74, 504, 577, 1460
Eco147I AGGCCT 1 cut(s) 760
Eco31I GGTCTC 1 cut(s) 618
Eco47I GGWCC 3 cut(s) 327, 581, 694
Eco47III AGCGCT 1 cut(s) 459
Eco52I CGGCCG 1 cut(s) 667
Eco57I CTGAAG 3 cut(s) 251, 263, 824
Eco72I CACGTG 1 cut(s) 740
EcoNI CCTNNNNNAGG 1 cut(s) 1094
EcoRII CCWGG 3 cut(s) 689, 1089, 1314
EcoT14I CCWWGG 4 cut(s) 74, 504, 577, 1460
ErhI CCWWGG 4 cut(s) 74, 504, 577, 1460
Esp3I CGTCTC 1 cut(s) 623
FaeI CATG 2 cut(s) 200, 397
FaiI YATR 8 cut(s) 111, 198, 270, 395, 533, 1056, 1104, 1302
FalI AAGNNNNNCTT 2 cut(s) 1203, 1235
FaqI GGGAC 1 cut(s) 707
FatI CATG 2 cut(s) 196, 393
FblI GTMKAC 1 cut(s) 753
Fnu4HI GCNGC 4 cut(s) 450, 453, 456, 465
FokI GGATG 4 cut(s) 317, 618, 1039, 1361
Fsp4HI GCNGC 4 cut(s) 450, 453, 456, 465
FspBI CTAG 3 cut(s) 188, 554, 941
GlaI GCGC 1 cut(s) 459
GluI GCNGC 4 cut(s) 450, 453, 456, 465
GsaI CCCAGC 1 cut(s) 449
GsuI CTGGAG 2 cut(s) 503, 708
HaeII RGCGCY 1 cut(s) 461
HaeIII GGCC 2 cut(s) 669, 760
HapII CCGG 2 cut(s) 325, 550
HgaI GACGC 1 cut(s) 396
HhaI GCGC 1 cut(s) 460
Hin1II CATG 2 cut(s) 200, 397
Hin6I GCGC 1 cut(s) 458
HinP1I GCGC 1 cut(s) 458
HinfI GANTC 9 cut(s) 79, 283, 473, 500, 781, 799, 893, 1079, 1328
HpaII CCGG 2 cut(s) 325, 550
HphI GGTGA 8 cut(s) 539, 566, 590, 940, 1159, 1262, 1370, 1409
Hpy166II GTNNAC 4 cut(s) 574, 674, 754, 1118
Hpy188I TCNGA 9 cut(s) 64, 282, 499, 789, 798, 804, 880, 1333, 1426
Hpy188III TCNNGA 8 cut(s) 229, 470, 520, 584, 635, 646, 725, 848
Hpy8I GTNNAC 4 cut(s) 574, 674, 754, 1118
HpyAV CCTTC 3 cut(s) 192, 784, 1427
HpyCH4III ACNGT 4 cut(s) 122, 172, 222, 1244
HpyCH4IV ACGT 1 cut(s) 739
HpyCH4V TGCA 4 cut(s) 452, 624, 674, 1412
HpyF10VI GCNNNNNNNGC 3 cut(s) 455, 461, 464
HpyF3I CTNAG 3 cut(s) 468, 1044, 1332
HpySE526I ACGT 1 cut(s) 739
Hsp92II CATG 2 cut(s) 200, 397
HspAI GCGC 1 cut(s) 458
Kzo9I GATC 4 cut(s) 299, 342, 586, 1336
LmnI GCTCC 2 cut(s) 252, 1456
Lsp1109I GCAGC 4 cut(s) 436, 451, 464, 467
LweI GCATC 2 cut(s) 254, 1405
MaeI CTAG 3 cut(s) 188, 554, 941
MaeII ACGT 1 cut(s) 739
MaeIII GTNAC 2 cut(s) 234, 350
MalI GATC 4 cut(s) 301, 344, 588, 1338
MboI GATC 4 cut(s) 299, 342, 586, 1336
MboII GAAGA 7 cut(s) 364, 531, 587, 776, 817, 1144, 1280
MfeI CAATTG 1 cut(s) 897
MflI RGATCY 2 cut(s) 586, 1336
MhlI GDGCHC 2 cut(s) 676, 860
MluCI AATT 6 cut(s) 604, 641, 843, 881, 897, 1381
MlyI GAGTC 3 cut(s) 494, 902, 1337
MseI TTAA 5 cut(s) 288, 483, 968, 980, 1221
MspA1I CMGCKG 1 cut(s) 449
MspI CCGG 2 cut(s) 325, 550
MspR9I CCNGG 4 cut(s) 325, 691, 1091, 1316
MunI CAATTG 1 cut(s) 897
MvaI CCWGG 3 cut(s) 691, 1091, 1316
MwoI GCNNNNNNNGC 3 cut(s) 455, 461, 464
NciI CCSGG 1 cut(s) 325
NdeII GATC 4 cut(s) 299, 342, 586, 1336
NheI GCTAGC 1 cut(s) 940
NlaIII CATG 2 cut(s) 200, 397
NlaIV GGNNCC 3 cut(s) 695, 1040, 1458
NspI RCATGY 1 cut(s) 200
PceI AGGCCT 1 cut(s) 760
PfeI GAWTC 6 cut(s) 79, 283, 473, 781, 799, 1079
PflMI CCANNNNNTGG 2 cut(s) 590, 703
PfoI TCCNGGA 1 cut(s) 1314
PkrI GCNGC 4 cut(s) 451, 454, 457, 466
PleI GAGTC 3 cut(s) 494, 901, 1336
PmaCI CACGTG 1 cut(s) 740
PmlI CACGTG 1 cut(s) 740
PpsI GAGTC 3 cut(s) 494, 901, 1336
Ppu21I YACGTR 1 cut(s) 740
PshBI ATTAAT 1 cut(s) 968
Psp6I CCWGG 3 cut(s) 689, 1089, 1314
PspCI CACGTG 1 cut(s) 740
PspFI CCCAGC 1 cut(s) 445
PspGI CCWGG 3 cut(s) 689, 1089, 1314
PspN4I GGNNCC 3 cut(s) 695, 1040, 1458
PspPI GGNCC 3 cut(s) 327, 581, 694
PstI CTGCAG 2 cut(s) 454, 1414
PsuI RGATCY 2 cut(s) 586, 1336
PvuII CAGCTG 1 cut(s) 449
SaqAI TTAA 5 cut(s) 288, 483, 968, 980, 1221
SatI GCNGC 4 cut(s) 450, 453, 456, 465
Sau3AI GATC 4 cut(s) 299, 342, 586, 1336
Sau96I GGNCC 3 cut(s) 327, 581, 694
SchI GAGTC 3 cut(s) 494, 902, 1337
ScrFI CCNGG 4 cut(s) 325, 691, 1091, 1316
SduI GDGCHC 2 cut(s) 676, 860
SfaNI GCATC 2 cut(s) 254, 1405
SfcI CTRYAG 2 cut(s) 450, 1410
SinI GGWCC 3 cut(s) 327, 581, 694
SmlI CTYRAG 1 cut(s) 677
SmoI CTYRAG 1 cut(s) 677
Sse9I AATT 6 cut(s) 604, 641, 843, 881, 897, 1381
SseBI AGGCCT 1 cut(s) 760
SsiI CCGC 2 cut(s) 275, 719
SspMI CTAG 3 cut(s) 188, 554, 941
StuI AGGCCT 1 cut(s) 760
StyD4I CCNGG 4 cut(s) 323, 689, 1089, 1314
StyI CCWWGG 4 cut(s) 74, 504, 577, 1460
TaaI ACNGT 4 cut(s) 122, 172, 222, 1244
TaiI ACGT 1 cut(s) 742
TaqI TCGA 1 cut(s) 298
TaqII GACCGA 1 cut(s) 600
TasI AATT 6 cut(s) 604, 641, 843, 881, 897, 1381
TfiI GAWTC 6 cut(s) 79, 283, 473, 781, 799, 1079
Tru1I TTAA 5 cut(s) 288, 483, 968, 980, 1221
Tru9I TTAA 5 cut(s) 288, 483, 968, 980, 1221
TscAI CASTG 1 cut(s) 249
TseI GCWGC 4 cut(s) 449, 452, 455, 464
TspDTI ATGAA 1 cut(s) 1281
TspGWI ACGGA 1 cut(s) 425
TspRI CASTG 1 cut(s) 249
Van91I CCANNNNNTGG 2 cut(s) 590, 703
VneI GTGCAC 1 cut(s) 672
VpaK11BI GGWCC 3 cut(s) 327, 581, 694
VspI ATTAAT 1 cut(s) 968
XagI CCTNNNNNAGG 1 cut(s) 1094
XapI RAATTY 2 cut(s) 641, 843
XceI RCATGY 1 cut(s) 200
XmiI GTMKAC 1 cut(s) 753
XspI CTAG 3 cut(s) 188, 554, 941
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.