Rorug04G0192000

Major allergen Pru

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0000091
Physical Location & Seq
Forward (+)
33492630 .. 33495842
3213 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0192000.1

Sequence Viewer

Length: 1032 bp
ATGGAAATAAACTTGGGGAAATTGGCGTTTGACCTCAATTTTCATCCATCGCAGCAATTAGTGACTACAGGTCTCATCGATGGCCACCTTCACTTGTATCGATATTCATCTGGTGGTTCACTACCTGAAAGGGTGTTGGAAGTTCATGCACACAGCGAATCTTGCAGAGCTGCTCGGTTCGTCAACGGTGGCAGTGCTATTGATGGATTATGTAGCCATTTTGACGGGGTCTCCAGACCACACAATTCTTGCAATATGTGGAAACTGGTTCTGCTCTCGCTTGCCTTGAAAATGCTCATGACCTCTGGAGATGATGGAGGCTGTATTAAGGTCTGGGATACCAGACAACGATCTCGCTGCAATTCCTTTAATGCTCATCAGGACTACATCTCCGATATGACTTTTTCAGCTGATTCCATGAAACTCCTGGGAACTAGTGGGGATGTAACTCTGTCTGTTTGCAATCTTCGAAGAAATAAGGTCCTAGATCAATCTGAGTTTTCAGAAGACAAGCTACTGTCTGTTGTTATCATGAAGAATGGTCAGAAAGTTATTTGCAGCTCACAAACTGGGAATATGTTGTTGTATTCATGGGGTTGTTTCAAGGATTGCAGACTTTCCAGTGATCGTTTTATTGATCTCTCTCCAAATTCTGTTGATGCTTTGTTGAAGCTTGATGAAGATAGACTTATTGCTGGATCTGAGACCGGACTTATCAGCCTAGTAGGCATATTACCAAACAGAGTCATCCAGCCAATTGCAGAGCACTCAGAATATCCAGTAGAGCGTCTTGGAGGTATCCAGCAGTTTTATGCATTCTCCCCTAATTACTGTTTCTTGCAGCTGTGGGATATGGATGATATATTGCAAGGCTCTAGAAATACTTCAAGGACTCAAGCAACTGTGGGGGACAATGATAGTGATGAGATGGATACAGATATTAATTCTCCAAAGTCTAGAAAAGGAACAAAGAGAAAAAATGCAAGCAAAGATCATGTTATGGGTTCACACAACTTTTTTGCTGATTTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Bet_v_1

Protein Analysis

343

Amino Acids

38.12

Weight (kDa)

5.99

Isoelectric Point (pI)

37.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WDR55 PF24796 2 - 264 7.5e-61 WDR55
Beta-prop_WDR5 PF25175 97 - 196 6.9e-09 WDR5 beta-propeller domain
Beta-prop_THOC3 PF25174 97 - 203 5e-09 THOC3 beta-propeller domain
WD40_Prp19 PF24814 99 - 177 3.3e-08 Prp19 WD40 domain
Beta-prop_WDR3_1st PF25173 100 - 191 1.4e-09 WDR3 first beta-propeller domain
Beta-prop_WDR36-Utp21_2nd PF25168 105 - 198 7.4e-07 WDR36/Utp21 second beta-propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000091)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g18830 FvH4_4g18850 FvH4_4g18851 FvH4_4g18990 FvH4_4g19000 FvH4_4g19010 FvH4_4g19020 FvH4_4g19040 FvH4_4g19050 FvH4_4g19060 FvH4_4g19080 FvH4_4g19120 FvH4_4g19170 FvH4_4g19700 FvH4_4g19710 FvH4_5g00780
malus_domestica MD13G1160600.v1.1 MD13G1160700.v1.1 MD13G1160900.v1.1 MD13G1161000.v1.1 MD13G1161100.v1.1 MD13G1161200.v1.1 MD13G1161300.v1.1 MD13G1161400.v1.1 MD16G1159900.v1.1 MD16G1160000.v1.1 MD16G1160100.v1.1 MD16G1160300.v1.1 MD16G1160400.v1.1 MD16G1160500.v1.1 MD16G1160700.v1.1 MD16G1161100.v1.1 MD16G1161200.v1.1 MD16G1161400.v1.1 MD16G1161500.v1.1
prunus_persica Prupe.1G126900_v2.0.a1 Prupe.1G126900_v2.0.a1 Prupe.1G127100_v2.0.a1 Prupe.1G127200_v2.0.a1 Prupe.1G127300_v2.0.a1 Prupe.1G127400_v2.0.a1 Prupe.1G127500_v2.0.a1 Prupe.1G127600_v2.0.a1 Prupe.1G127600_v2.0.a1 Prupe.1G127700_v2.0.a1 Prupe.1G127800_v2.0.a1 Prupe.1G127900_v2.0.a1 Prupe.1G128100_v2.0.a1 Prupe.1G128200_v2.0.a1 Prupe.1G128300_v2.0.a1 Prupe.1G128500_v2.0.a1 Prupe.1G128600_v2.0.a1 Prupe.1G128700_v2.0.a1 Prupe.6G094400_v2.0.a1
pyrus_communis pycom06g07350 pycom08g13110 pycom08g13120 pycom13g13660 pycom13g13680 pycom13g13700 pycom13g13710 pycom13g13730 pycom13g13740 pycom13g13750 pycom13g13760 pycom16g13470 pycom16g13480 pycom16g13540 pycom16g13580 pycom16g13600 pycom16g13650 pycom16g13690
rosa_chinensis RchiOBHm_Chr4g0410071 RchiOBHm_Chr4g0410081 RchiOBHm_Chr4g0410091 RchiOBHm_Chr4g0410251 RchiOBHm_Chr4g0410281 RchiOBHm_Chr4g0410291 RchiOBHm_Chr4g0423641 RchiOBHm_Chr4g0423661 RchiOBHm_Chr4g0423691 RchiOBHm_Chr4g0423701 RchiOBHm_Chr4g0423711 RchiOBHm_Chr4g0423721 RchiOBHm_Chr4g0423881 RchiOBHm_Chr4g0423891 RchiOBHm_Chr4g0423901 RchiOBHm_Chr4g0423911 RchiOBHm_Chr4g0423921 RchiOBHm_Chr4g0423931 RchiOBHm_Chr4g0423941 RchiOBHm_Chr4g0423961 RchiOBHm_Chr4g0423971 RchiOBHm_Chr4g0423991 RchiOBHm_Chr4g0424011 RchiOBHm_Chr4g0424021 RchiOBHm_Chr4g0424031 RchiOBHm_Chr4g0424041 RchiOBHm_Chr4g0424121 RchiOBHm_Chr4g0424131 RchiOBHm_Chr4g0425171 RchiOBHm_Chr4g0425181 RchiOBHm_Chr7g0201401
rosa_laevigata RLG00000003678 RLG00000007393 RLG00000007394 RLG00000007502 RLG00000007503 RLG00000007508 RLG00000007509 RLG00000007510 RLG00000007511 RLG00000007512 RLG00000007514 RLG00000007515 RLG00000007516 RLG00000007517 RLG00000007518 RLG00000007520 RLG00000007521 RLG00000007523 RLG00000007535 RLG00000007536 RLG00000007537 RLG00000007538 RLG00000007539 RLG00000008440 RLG00000008441 RLG00000008491 RLG00000008504
rosa_multiflora Rmu_co8215346.1_g000001 Rmu_sc0000365.1_g000047 Rmu_sc0000365.1_g000054 Rmu_sc0000365.1_g000055 Rmu_sc0000464.1_g000004 Rmu_sc0000464.1_g000005 Rmu_sc0000464.1_g000006 Rmu_sc0000464.1_g000007 Rmu_sc0000464.1_g000009 Rmu_sc0000464.1_g000012 Rmu_sc0000464.1_g000013 Rmu_sc0000464.1_g000015 Rmu_sc0000554.1_g000007 Rmu_sc0001469.1_g000009 Rmu_sc0002111.1_g000036 Rmu_sc0002260.1_g000046 Rmu_sc0002260.1_g000047 Rmu_sc0002260.1_g000064 Rmu_sc0002260.1_g000067 Rmu_sc0002260.1_g000068 Rmu_sc0002260.1_g000069 Rmu_sc0002260.1_g000075 Rmu_sc0002260.1_g000078 Rmu_sc0002260.1_g000079 Rmu_sc0002260.1_g000080 Rmu_sc0002260.1_g000088 Rmu_sc0002260.1_g000090 Rmu_sc0002260.1_g000093 Rmu_sc0002260.1_g000094 Rmu_sc0002260.1_g000096 Rmu_sc0004705.1_g000030 Rmu_sc0006329.1_g000002 Rmu_sc0008373.1_g000005 Rmu_sc0008373.1_g000006 Rmu_sc0008373.1_g000007 Rmu_sc0008373.1_g000009 Rmu_sc0008373.1_g000010 Rmu_sc0013971.1_g000005 Rmu_sc0028704.1_g000001 Rmu_ssc0000420.1_g000042 Rmu_ssc0000420.1_g000043
rosa_roxburghii Rroxscaffold_1G00039420 Rroxscaffold_3G00255320 Rroxscaffold_5G00354650 Rroxscaffold_5G00354670 Rroxscaffold_5G00354680 Rroxscaffold_5G00354770 Rroxscaffold_5G00354780 Rroxscaffold_5G00354840 Rroxscaffold_5G00354850 Rroxscaffold_5G00354880 Rroxscaffold_5G00355060 Rroxscaffold_5G00365850 Rroxscaffold_5G00365860 Rroxscaffold_5G00365880 Rroxscaffold_5G00365980 Rroxscaffold_5G00365990 Rroxscaffold_5G00366000 Rroxscaffold_5G00366010 Rroxscaffold_5G00366030 Rroxscaffold_5G00366040 Rroxscaffold_5G00366110 Rroxscaffold_5G00366120
rosa_rugosa Rorug04G0100900 Rorug04G0100900 Rorug04G0101000 Rorug04G0101000 Rorug04G0101100 Rorug04G0101600 Rorug04G0101700 Rorug04G0101700 Rorug04G0101900 Rorug04G0189300 Rorug04G0189400 Rorug04G0189500 Rorug04G0189500 Rorug04G0189600 Rorug04G0191600 Rorug04G0191800 Rorug04G0191800 Rorug04G0191900 Rorug04G0192000 Rorug04G0192100 Rorug04G0192200 Rorug04G0192300 Rorug04G0192500 Rorug04G0192500 Rorug04G0192600 Rorug04G0192700 Rorug04G0192700 Rorug04G0192700 Rorug04G0193200 Rorug04G0193300 Rorug04G0201800 Rorug04G0201800 Rorug07G0063300.1
rosa_samantha Rh4CG170500 Rh4CG171600 Rh4CG171900 Rh4CG262200 Rh4CG262400 Rh4CG262500 Rh4CG262600 Rh4CG262700 Rh4CG262800 Rh4CG262900 Rh4CG263000 Rh4CG264700 Rh4CG264800 Rh4CG264900 Rh4CG265000 Rh4CG265100 Rh4CG265200 Rh4CG265300 Rh4CG265500 Rh4CG265600 Rh4CG265700 Rh4CG265800 Rh4CG265900 Rh4CG266100 Rh4CG266200 Rh4CG266800 Rh4CG267200 Rh4CG275400 Rh4CG275500 Rh7CG201600
rosa_wichuraiana Rw4G013200 Rw4G013210 Rw4G013220 Rw4G013300 Rw4G021330 Rw4G021340 Rw4G021350 Rw4G021360 Rw4G021370 Rw4G021380 Rw4G021510 Rw4G021530 Rw4G021540 Rw4G021560 Rw4G021570 Rw4G021580 Rw4G021590 Rw4G021600 Rw4G021610 Rw4G021620 Rw4G021630 Rw4G021650 Rw4G021660 Rw4G022390 Rw7G016700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 706
AcoI YGGCCR 1 cut(s) 82
AcsI RAATTY 1 cut(s) 649
AgsI TTSAA 4 cut(s) 289, 604, 670, 888
AhdI GACNNNNNGTC 1 cut(s) 69
AhlI ACTAGT 1 cut(s) 434
AjnI CCWGG 1 cut(s) 426
AluBI AGCT 6 cut(s) 170, 410, 514, 561, 673, 844
AluI AGCT 6 cut(s) 170, 410, 514, 561, 673, 844
Alw21I GWGCWC 1 cut(s) 768
Alw26I GTCTC 3 cut(s) 77, 235, 698
AlwI GGATC 1 cut(s) 706
AoxI GGCC 1 cut(s) 82
ApeKI GCWGC 5 cut(s) 52, 170, 357, 558, 841
ApoI RAATTY 1 cut(s) 649
AseI ATTAAT 1 cut(s) 942
Asp700I GAANNNNTTC 1 cut(s) 883
AspS9I GGNCC 1 cut(s) 481
AsuII TTCGAA 1 cut(s) 469
AvaII GGWCC 1 cut(s) 481
BalI TGGCCA 1 cut(s) 84
BarI GAAGNNNNNNTAC 2 cut(s) 498, 530
BbsI GAAGAC 1 cut(s) 513
Bbv12I GWGCWC 1 cut(s) 768
BbvI GCAGC 5 cut(s) 64, 157, 344, 570, 853
BccI CCATC 5 cut(s) 55, 74, 197, 308, 922
BcgI CGANNNNNNTGC 2 cut(s) 339, 373
BciT130I CCWGG 1 cut(s) 428
BciVI GTATCC 3 cut(s) 331, 809, 925
BcoDI GTCTC 3 cut(s) 77, 235, 698
BcuI ACTAGT 1 cut(s) 434
BfaI CTAG 5 cut(s) 435, 485, 722, 876, 957
BfmI CTRYAG 1 cut(s) 66
BfuI GTATCC 3 cut(s) 331, 809, 925
BglI GCCNNNNNGGC 1 cut(s) 726
BisI GCNGC 5 cut(s) 53, 171, 358, 559, 842
BlsI GCNGC 5 cut(s) 54, 172, 359, 560, 843
Bme1390I CCNGG 1 cut(s) 428
Bme18I GGWCC 1 cut(s) 481
BmeRI GACNNNNNGTC 1 cut(s) 69
BmgT120I GGNCC 1 cut(s) 481
BmrFI CCNGG 1 cut(s) 428
BmrI ACTGGG 1 cut(s) 579
BmsI GCATC 1 cut(s) 649
BmuI ACTGGG 1 cut(s) 579
BpiI GAAGAC 1 cut(s) 513
BpmI CTGGAG 2 cut(s) 217, 327
Bpu14I TTCGAA 1 cut(s) 469
BpuEI CTTGAG 1 cut(s) 879
Bsa29I ATCGAT 2 cut(s) 78, 100
BsaBI GATNNNNATC 1 cut(s) 106
BsaI GGTCTC 3 cut(s) 77, 235, 698
BsaJI CCNNGG 1 cut(s) 427
BsaWI WCCGGW 1 cut(s) 707
BsaXI ACNNNNNCTCC 4 cut(s) 215, 245, 374, 404
Bse1I ACTGG 4 cut(s) 270, 574, 621, 779
Bse8I GATNNNNATC 1 cut(s) 106
BseBI CCWGG 1 cut(s) 428
BseCI ATCGAT 2 cut(s) 78, 100
BseDI CCNNGG 1 cut(s) 427
BseGI GGATG 4 cut(s) 43, 448, 747, 862
BseJI GATNNNNATC 1 cut(s) 106
BseMII CTCAG 3 cut(s) 486, 693, 783
BseNI ACTGG 4 cut(s) 270, 574, 621, 779
BseXI GCAGC 5 cut(s) 64, 157, 344, 570, 853
BshFI GGCC 1 cut(s) 84
BshVI ATCGAT 2 cut(s) 78, 100
BsiHKAI GWGCWC 1 cut(s) 768
BsiSI CCGG 1 cut(s) 708
BslFI GGGAC 1 cut(s) 923
BsmAI GTCTC 3 cut(s) 77, 235, 698
BsmFI GGGAC 1 cut(s) 923
BsmI GAATGC 1 cut(s) 815
BsnI GGCC 1 cut(s) 84
Bso31I GGTCTC 3 cut(s) 77, 235, 698
Bsp119I TTCGAA 1 cut(s) 469
Bsp1286I GDGCHC 1 cut(s) 768
Bsp143I GATC 6 cut(s) 350, 487, 625, 637, 698, 991
BspANI GGCC 1 cut(s) 84
BspCNI CTCAG 3 cut(s) 487, 694, 782
BspDI ATCGAT 2 cut(s) 78, 100
BspHI TCATGA 2 cut(s) 297, 531
BspPI GGATC 1 cut(s) 706
BspT104I TTCGAA 1 cut(s) 469
BspTNI GGTCTC 3 cut(s) 77, 235, 698
BsrI ACTGG 4 cut(s) 270, 574, 621, 779
BssECI CCNNGG 1 cut(s) 427
BssMI GATC 6 cut(s) 350, 487, 625, 637, 698, 991
Bst2UI CCWGG 1 cut(s) 428
Bst4CI ACNGT 4 cut(s) 188, 519, 833, 904
BstBI TTCGAA 1 cut(s) 469
BstC8I GCNNGC 2 cut(s) 282, 985
BstDEI CTNAG 3 cut(s) 495, 702, 769
BstF5I GGATG 4 cut(s) 43, 448, 747, 862
BstKTI GATC 6 cut(s) 353, 490, 628, 640, 701, 994
BstMAI GTCTC 3 cut(s) 77, 235, 698
BstMBI GATC 6 cut(s) 350, 487, 625, 637, 698, 991
BstMWI GCNNNNNNNGC 2 cut(s) 162, 726
BstNI CCWGG 1 cut(s) 428
BstSCI CCNGG 1 cut(s) 426
BstSFI CTRYAG 1 cut(s) 66
BstV1I GCAGC 5 cut(s) 64, 157, 344, 570, 853
BstV2I GAAGAC 1 cut(s) 513
BstX2I RGATCY 1 cut(s) 698
BstYI RGATCY 1 cut(s) 698
Bsu15I ATCGAT 2 cut(s) 78, 100
BsuI GTATCC 3 cut(s) 331, 809, 925
BsuRI GGCC 1 cut(s) 84
BsuTUI ATCGAT 2 cut(s) 78, 100
BtgZI GCGATG 1 cut(s) 33
BtsCI GGATG 4 cut(s) 43, 448, 747, 862
BtsI GCAGTG 1 cut(s) 199
BtsIMutI CAGTG 2 cut(s) 199, 628
Cac8I GCNNGC 2 cut(s) 282, 985
CciI TCATGA 2 cut(s) 297, 531
Cfr13I GGNCC 1 cut(s) 481
ClaI ATCGAT 2 cut(s) 78, 100
CseI GACGC 1 cut(s) 776
CviAII CATG 6 cut(s) 146, 298, 418, 532, 591, 995
DdeI CTNAG 3 cut(s) 495, 702, 769
DpnI GATC 6 cut(s) 352, 489, 627, 639, 700, 993
DpnII GATC 6 cut(s) 350, 487, 625, 637, 698, 991
DriI GACNNNNNGTC 1 cut(s) 69
EaeI YGGCCR 1 cut(s) 82
Eam1105I GACNNNNNGTC 1 cut(s) 69
Eco31I GGTCTC 3 cut(s) 77, 235, 698
Eco47I GGWCC 1 cut(s) 481
EcoO109I RGGNCCY 1 cut(s) 481
EcoRII CCWGG 1 cut(s) 426
EcoT22I ATGCAT 1 cut(s) 817
FaeI CATG 6 cut(s) 149, 301, 421, 535, 594, 998
FalI AAGNNNNNCTT 2 cut(s) 672, 704
FaqI GGGAC 1 cut(s) 923
FatI CATG 6 cut(s) 145, 297, 417, 531, 590, 994
Fnu4HI GCNGC 5 cut(s) 53, 171, 358, 559, 842
FokI GGATG 4 cut(s) 30, 455, 734, 869
Fsp4HI GCNGC 5 cut(s) 53, 171, 358, 559, 842
FspBI CTAG 5 cut(s) 435, 485, 722, 876, 957
GluI GCNGC 5 cut(s) 53, 171, 358, 559, 842
GsuI CTGGAG 2 cut(s) 217, 327
HaeIII GGCC 1 cut(s) 84
HapII CCGG 1 cut(s) 708
HgaI GACGC 1 cut(s) 776
Hin1II CATG 6 cut(s) 149, 301, 421, 535, 594, 998
HincII GTYRAC 1 cut(s) 184
HindII GTYRAC 1 cut(s) 184
HindIII AAGCTT 1 cut(s) 671
HinfI GANTC 4 cut(s) 158, 413, 744, 892
HpaII CCGG 1 cut(s) 708
Hpy166II GTNNAC 3 cut(s) 119, 184, 1007
Hpy188I TCNGA 6 cut(s) 394, 496, 505, 546, 703, 772
Hpy188III TCNNGA 7 cut(s) 234, 298, 306, 380, 532, 876, 957
Hpy8I GTNNAC 3 cut(s) 119, 184, 1007
HpyAV CCTTC 1 cut(s) 98
HpyCH4III ACNGT 4 cut(s) 188, 519, 833, 904
HpyF10VI GCNNNNNNNGC 2 cut(s) 162, 726
HpyF3I CTNAG 3 cut(s) 495, 702, 769
Hsp92II CATG 6 cut(s) 149, 301, 421, 535, 594, 998
Kzo9I GATC 6 cut(s) 350, 487, 625, 637, 698, 991
Lsp1109I GCAGC 5 cut(s) 64, 157, 344, 570, 853
LweI GCATC 1 cut(s) 649
MaeI CTAG 5 cut(s) 435, 485, 722, 876, 957
MaeIII GTNAC 2 cut(s) 61, 445
MalI GATC 6 cut(s) 352, 489, 627, 639, 700, 993
MboI GATC 6 cut(s) 350, 487, 625, 637, 698, 991
MboII GAAGA 5 cut(s) 458, 483, 518, 547, 692
MfeI CAATTG 1 cut(s) 756
MflI RGATCY 1 cut(s) 698
MhlI GDGCHC 1 cut(s) 768
MlsI TGGCCA 1 cut(s) 84
MluCI AATT 9 cut(s) 20, 37, 56, 244, 361, 649, 756, 826, 943
MluNI TGGCCA 1 cut(s) 84
MlyI GAGTC 2 cut(s) 753, 886
MmeI TCCRAC 1 cut(s) 117
MnlI CCTC 4 cut(s) 44, 311, 313, 788
Mox20I TGGCCA 1 cut(s) 84
Mph1103I ATGCAT 1 cut(s) 817
MroXI GAANNNNTTC 1 cut(s) 883
MscI TGGCCA 1 cut(s) 84
MseI TTAA 3 cut(s) 327, 369, 942
Msp20I TGGCCA 1 cut(s) 84
MspA1I CMGCKG 2 cut(s) 410, 844
MspI CCGG 1 cut(s) 708
MspR9I CCNGG 1 cut(s) 428
MunI CAATTG 1 cut(s) 756
Mva1269I GAATGC 1 cut(s) 815
MvaI CCWGG 1 cut(s) 428
MwoI GCNNNNNNNGC 2 cut(s) 162, 726
NdeII GATC 6 cut(s) 350, 487, 625, 637, 698, 991
NlaIII CATG 6 cut(s) 149, 301, 421, 535, 594, 998
NmuCI GTSAC 1 cut(s) 61
NsiI ATGCAT 1 cut(s) 817
NspV TTCGAA 1 cut(s) 469
PagI TCATGA 2 cut(s) 297, 531
PctI GAATGC 1 cut(s) 815
PdmI GAANNNNTTC 1 cut(s) 883
PfeI GAWTC 2 cut(s) 158, 413
PflFI GACNNNGTC 1 cut(s) 227
PkrI GCNGC 5 cut(s) 54, 172, 359, 560, 843
PleI GAGTC 2 cut(s) 752, 886
PpsI GAGTC 2 cut(s) 752, 886
PpuMI RGGWCCY 1 cut(s) 481
PshBI ATTAAT 1 cut(s) 942
Psp5II RGGWCCY 1 cut(s) 481
Psp6I CCWGG 1 cut(s) 426
PspGI CCWGG 1 cut(s) 426
PspPI GGNCC 1 cut(s) 481
PspPPI RGGWCCY 1 cut(s) 481
PsuI RGATCY 1 cut(s) 698
PsyI GACNNNGTC 1 cut(s) 227
PvuII CAGCTG 2 cut(s) 410, 844
SaqAI TTAA 3 cut(s) 327, 369, 942
SatI GCNGC 5 cut(s) 53, 171, 358, 559, 842
Sau3AI GATC 6 cut(s) 350, 487, 625, 637, 698, 991
Sau96I GGNCC 1 cut(s) 481
SchI GAGTC 2 cut(s) 753, 886
ScrFI CCNGG 1 cut(s) 428
SduI GDGCHC 1 cut(s) 768
SfaNI GCATC 1 cut(s) 649
SfcI CTRYAG 1 cut(s) 66
SfuI TTCGAA 1 cut(s) 469
SinI GGWCC 1 cut(s) 481
SmlI CTYRAG 1 cut(s) 894
SmoI CTYRAG 1 cut(s) 894
SpeI ACTAGT 1 cut(s) 434
Sse9I AATT 9 cut(s) 20, 37, 56, 244, 361, 649, 756, 826, 943
SspMI CTAG 5 cut(s) 435, 485, 722, 876, 957
StyD4I CCNGG 1 cut(s) 426
TaaI ACNGT 4 cut(s) 188, 519, 833, 904
TaqI TCGA 3 cut(s) 78, 100, 469
TasI AATT 9 cut(s) 20, 37, 56, 244, 361, 649, 756, 826, 943
TfiI GAWTC 2 cut(s) 158, 413
Tru1I TTAA 3 cut(s) 327, 369, 942
Tru9I TTAA 3 cut(s) 327, 369, 942
TscAI CASTG 2 cut(s) 199, 628
TseFI GTSAC 1 cut(s) 61
TseI GCWGC 5 cut(s) 52, 170, 357, 558, 841
Tsp45I GTSAC 1 cut(s) 61
TspDTI ATGAA 7 cut(s) 32, 96, 134, 434, 548, 579, 693
TspRI CASTG 2 cut(s) 199, 628
Tth111I GACNNNGTC 1 cut(s) 227
VpaK11BI GGWCC 1 cut(s) 481
VspI ATTAAT 1 cut(s) 942
XapI RAATTY 1 cut(s) 649
XbaI TCTAGA 2 cut(s) 875, 956
XcmI CCANNNNNNNNNTGG 1 cut(s) 424
XmnI GAANNNNTTC 1 cut(s) 883
XspI CTAG 5 cut(s) 435, 485, 722, 876, 957
Zsp2I ATGCAT 1 cut(s) 817
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.