Prupe.1G221800_v2.0.a1

PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0001652
Physical Location & Seq
Forward (+)
23607927 .. 23610981
3055 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G221800.3

Sequence Viewer

Length: 789 bp
ATGGCGGCTCCATTGACCACCCTGTCAAATGTTGGTTCGCTTCCGGGTTCTCGCAGCGTATCTCAGATCAGAGCTTTGACCCCTACCTGTACTTCAGTCACGCTTCCAACAATTCCATTGTCTTCTAACAAAAAGGCAACGTTATCCTCCAGCTTCCTCTCCAGGTCGTCGCGTTTGTCCCCTCTGACATTCTCTTCAAACCCTAATTCTCAGAAAAGGGCCAGTCTTGTTAGCTCAGTCCGGGCCAGTGCTGAGGAAGCAACTTTGCAATCAAAAGTGACCCATAAGGTGTATTTTGACATTAGCATTGGGAATCCAGTTGGGAAGCTTGCTGGAAGGATTGTGATTGGATTGTTTGGTGATGATGTGCCCCAAACCGCAGAGAATTTCCGTGCCCTGTGCACAGGTGATAAAGGCTTTGGGTTCAAGGGTTCAGCATTCCATCGTGTAATCAAGGATTTCATGATTCAAGGAGGGGATTTTGACAAAGGCAATGGAACTGGAGGTAAAAGCATTTACGGTCGTACTTTTAAGGATGAGAACTTTAAGTTGTCTCATACTGGACCAGGAGTTGTTAGCATGGCCAATGCAGGCCCCAATACCAATGGGAGCCAGTTCTTCATATGCACTGTCAAGACCCCATGGCTCGACAACAGGCATGTTGTGTTTGGGCAAGTTCTGGAAGGCCTGGATGTGGTTAGGCTGATTGAGTCTCAAGAGACAGACAGAGGCGACCGTCCTACAAAGAAGGTGGTCATTGCCGACTGCGGAGAGCTGCCGGTGGCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pro_isomerase

Protein Analysis

263

Amino Acids

27.88

Weight (kDa)

9.56

Isoelectric Point (pI)

33.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 22
AccII CGCG 1 cut(s) 172
AciI CCGC 3 cut(s) 5, 378, 768
AclI AACGTT 1 cut(s) 140
AcoI YGGCCR 1 cut(s) 582
AcsI RAATTY 1 cut(s) 385
AcuI CTGAAG 1 cut(s) 78
AfaI GTAC 2 cut(s) 91, 526
AfiI CCNNNNNNNGG 1 cut(s) 694
AgsI TTSAA 3 cut(s) 198, 427, 470
AjnI CCWGG 3 cut(s) 161, 565, 687
AluBI AGCT 5 cut(s) 74, 153, 234, 328, 775
AluI AGCT 5 cut(s) 74, 153, 234, 328, 775
Alw21I GWGCWC 1 cut(s) 404
Alw26I GTCTC 3 cut(s) 558, 713, 717
Alw44I GTGCAC 1 cut(s) 400
AoxI GGCC 6 cut(s) 219, 243, 582, 592, 685, 783
ApaLI GTGCAC 1 cut(s) 400
ApeKI GCWGC 2 cut(s) 54, 775
ApoI RAATTY 1 cut(s) 385
AspS9I GGNCC 4 cut(s) 219, 243, 563, 593
AsuC2I CCSGG 2 cut(s) 45, 242
AsuHPI GGTGA 2 cut(s) 371, 419
AvaII GGWCC 1 cut(s) 563
BaeGI GKGCMC 3 cut(s) 372, 397, 404
BalI TGGCCA 1 cut(s) 584
BbsI GAAGAC 1 cut(s) 114
Bbv12I GWGCWC 1 cut(s) 404
BbvCI CCTCAGC 1 cut(s) 252
BbvI GCAGC 2 cut(s) 66, 762
BccI CCATC 1 cut(s) 450
BciT130I CCWGG 3 cut(s) 163, 567, 689
BcnI CCSGG 2 cut(s) 45, 242
BcoDI GTCTC 3 cut(s) 558, 713, 717
BisI GCNGC 3 cut(s) 6, 55, 776
BlsI GCNGC 3 cut(s) 7, 56, 777
Bme1390I CCNGG 5 cut(s) 45, 163, 242, 567, 689
Bme18I GGWCC 1 cut(s) 563
BmgT120I GGNCC 4 cut(s) 219, 243, 563, 593
BmiI GGNNCC 3 cut(s) 9, 595, 611
BmrFI CCNGG 5 cut(s) 45, 163, 242, 567, 689
BpiI GAAGAC 1 cut(s) 114
BpmI CTGGAG 3 cut(s) 133, 145, 522
Bpu10I CCTNAGC 1 cut(s) 252
BpuEI CTTGAG 1 cut(s) 699
BpuMI CCSGG 2 cut(s) 45, 242
BsaJI CCNNGG 1 cut(s) 641
Bsc4I CCNNNNNNNGG 1 cut(s) 694
Bse118I RCCGGY 1 cut(s) 778
Bse1I ACTGG 6 cut(s) 222, 246, 317, 505, 565, 613
Bse3DI GCAATG 2 cut(s) 499, 756
BseBI CCWGG 3 cut(s) 163, 567, 689
BseDI CCNNGG 1 cut(s) 641
BseGI GGATG 2 cut(s) 541, 697
BseLI CCNNNNNNNGG 1 cut(s) 694
BseMI GCAATG 2 cut(s) 499, 756
BseMII CTCAG 4 cut(s) 77, 224, 243, 249
BseNI ACTGG 6 cut(s) 222, 246, 317, 505, 565, 613
BseSI GKGCMC 3 cut(s) 372, 397, 404
BseXI GCAGC 2 cut(s) 66, 762
Bsh1236I CGCG 1 cut(s) 172
Bsh1285I CGRYCG 2 cut(s) 523, 736
BshFI GGCC 6 cut(s) 221, 245, 584, 594, 687, 785
BsiEI CGRYCG 2 cut(s) 523, 736
BsiHKAI GWGCWC 1 cut(s) 404
BsiSI CCGG 3 cut(s) 44, 241, 779
BslFI GGGAC 1 cut(s) 163
BslI CCNNNNNNNGG 1 cut(s) 694
BsmAI GTCTC 3 cut(s) 558, 713, 717
BsmFI GGGAC 1 cut(s) 163
BsmI GAATGC 1 cut(s) 437
BsnI GGCC 6 cut(s) 221, 245, 584, 594, 687, 785
Bsp1286I GDGCHC 3 cut(s) 372, 397, 404
Bsp143I GATC 1 cut(s) 66
Bsp19I CCATGG 1 cut(s) 641
BspACI CCGC 3 cut(s) 5, 378, 768
BspANI GGCC 6 cut(s) 221, 245, 584, 594, 687, 785
BspCNI CTCAG 4 cut(s) 76, 223, 244, 248
BspFNI CGCG 1 cut(s) 172
BspHI TCATGA 1 cut(s) 462
BspLI GGNNCC 3 cut(s) 9, 595, 611
BsrDI GCAATG 2 cut(s) 499, 756
BsrFI RCCGGY 1 cut(s) 778
BsrI ACTGG 6 cut(s) 222, 246, 317, 505, 565, 613
BssAI RCCGGY 1 cut(s) 778
BssECI CCNNGG 1 cut(s) 641
BssMI GATC 1 cut(s) 66
BssT1I CCWWGG 1 cut(s) 641
Bst2UI CCWGG 3 cut(s) 163, 567, 689
Bst4CI ACNGT 3 cut(s) 521, 631, 737
Bst6I CTCTTC 1 cut(s) 199
BstC8I GCNNGC 2 cut(s) 330, 592
BstDEI CTNAG 4 cut(s) 63, 210, 235, 252
BstDSI CCRYGG 1 cut(s) 641
BstF5I GGATG 2 cut(s) 541, 697
BstFNI CGCG 1 cut(s) 172
BstKTI GATC 1 cut(s) 69
BstMAI GTCTC 3 cut(s) 558, 713, 717
BstMBI GATC 1 cut(s) 66
BstMCI CGRYCG 2 cut(s) 523, 736
BstMWI GCNNNNNNNGC 1 cut(s) 257
BstNI CCWGG 3 cut(s) 163, 567, 689
BstNSI RCATGY 1 cut(s) 662
BstSCI CCNGG 5 cut(s) 43, 161, 240, 565, 687
BstSLI GKGCMC 3 cut(s) 372, 397, 404
BstUI CGCG 1 cut(s) 172
BstV1I GCAGC 2 cut(s) 66, 762
BstV2I GAAGAC 1 cut(s) 114
BsuRI GGCC 6 cut(s) 221, 245, 584, 594, 687, 785
BtgI CCRYGG 1 cut(s) 641
BtsCI GGATG 2 cut(s) 541, 697
BtsIMutI CAGTG 2 cut(s) 253, 627
Cac8I GCNNGC 2 cut(s) 330, 592
CciI TCATGA 1 cut(s) 462
Cfr10I RCCGGY 1 cut(s) 778
Cfr13I GGNCC 4 cut(s) 219, 243, 563, 593
Csp6I GTAC 2 cut(s) 90, 525
CspCI CAANNNNNGTGG 2 cut(s) 732, 767
CviAII CATG 4 cut(s) 463, 580, 642, 659
CviQI GTAC 2 cut(s) 90, 525
DdeI CTNAG 4 cut(s) 63, 210, 235, 252
DpnI GATC 1 cut(s) 68
DpnII GATC 1 cut(s) 66
DrdI GACNNNNNNGTC 1 cut(s) 22
DseDI GACNNNNNNGTC 1 cut(s) 22
EaeI YGGCCR 1 cut(s) 582
Eam1104I CTCTTC 1 cut(s) 199
EarI CTCTTC 1 cut(s) 199
Eco130I CCWWGG 1 cut(s) 641
Eco147I AGGCCT 1 cut(s) 687
Eco47I GGWCC 1 cut(s) 563
Eco57I CTGAAG 1 cut(s) 78
EcoO109I RGGNCCY 1 cut(s) 593
EcoRII CCWGG 3 cut(s) 161, 565, 687
EcoT14I CCWWGG 1 cut(s) 641
ErhI CCWWGG 1 cut(s) 641
FaeI CATG 4 cut(s) 466, 583, 645, 662
FaiI YATR 8 cut(s) 285, 464, 558, 581, 623, 625, 643, 660
FaqI GGGAC 1 cut(s) 163
FatI CATG 4 cut(s) 462, 579, 641, 658
FauNDI CATATG 1 cut(s) 623
Fnu4HI GCNGC 3 cut(s) 6, 55, 776
FokI GGATG 2 cut(s) 548, 704
Fsp4HI GCNGC 3 cut(s) 6, 55, 776
GluI GCNGC 3 cut(s) 6, 55, 776
GsuI CTGGAG 3 cut(s) 133, 145, 522
HaeIII GGCC 6 cut(s) 221, 245, 584, 594, 687, 785
HapII CCGG 3 cut(s) 44, 241, 779
Hin1II CATG 4 cut(s) 466, 583, 645, 662
HindIII AAGCTT 1 cut(s) 326
HinfI GANTC 3 cut(s) 313, 466, 710
HpaII CCGG 3 cut(s) 44, 241, 779
HphI GGTGA 2 cut(s) 371, 419
Hpy166II GTNNAC 1 cut(s) 402
Hpy188I TCNGA 4 cut(s) 66, 71, 186, 213
Hpy188III TCNNGA 4 cut(s) 463, 634, 680, 716
Hpy8I GTNNAC 1 cut(s) 402
Hpy99I CGWCG 1 cut(s) 172
HpyAV CCTTC 3 cut(s) 330, 677, 742
HpyCH4III ACNGT 3 cut(s) 521, 631, 737
HpyCH4IV ACGT 1 cut(s) 140
HpyCH4V TGCA 4 cut(s) 268, 402, 590, 627
HpyF10VI GCNNNNNNNGC 1 cut(s) 257
HpyF3I CTNAG 4 cut(s) 63, 210, 235, 252
HpySE526I ACGT 1 cut(s) 140
Hsp92II CATG 4 cut(s) 466, 583, 645, 662
Kzo9I GATC 1 cut(s) 66
LmnI GCTCC 2 cut(s) 13, 609
Lsp1109I GCAGC 2 cut(s) 66, 762
MaeII ACGT 1 cut(s) 140
MaeIII GTNAC 2 cut(s) 97, 277
MalI GATC 1 cut(s) 68
MboI GATC 1 cut(s) 66
MboII GAAGA 3 cut(s) 114, 186, 610
MhlI GDGCHC 3 cut(s) 372, 397, 404
MlsI TGGCCA 1 cut(s) 584
MluCI AATT 3 cut(s) 111, 205, 385
MluNI TGGCCA 1 cut(s) 584
MlyI GAGTC 1 cut(s) 719
MmeI TCCRAC 1 cut(s) 131
MnlI CCTC 7 cut(s) 157, 167, 192, 247, 467, 497, 722
Mox20I TGGCCA 1 cut(s) 584
MscI TGGCCA 1 cut(s) 584
MseI TTAA 2 cut(s) 531, 546
Msp20I TGGCCA 1 cut(s) 584
MspI CCGG 3 cut(s) 44, 241, 779
MspR9I CCNGG 5 cut(s) 45, 163, 242, 567, 689
Mva1269I GAATGC 1 cut(s) 437
MvaI CCWGG 3 cut(s) 163, 567, 689
MvnI CGCG 1 cut(s) 172
MwoI GCNNNNNNNGC 1 cut(s) 257
NciI CCSGG 2 cut(s) 45, 242
NcoI CCATGG 1 cut(s) 641
NdeI CATATG 1 cut(s) 623
NdeII GATC 1 cut(s) 66
NlaIII CATG 4 cut(s) 466, 583, 645, 662
NlaIV GGNNCC 3 cut(s) 9, 595, 611
NmuCI GTSAC 2 cut(s) 97, 277
NspI RCATGY 1 cut(s) 662
PagI TCATGA 1 cut(s) 462
PceI AGGCCT 1 cut(s) 687
PctI GAATGC 1 cut(s) 437
PfeI GAWTC 2 cut(s) 313, 466
PkrI GCNGC 3 cut(s) 7, 56, 777
PleI GAGTC 1 cut(s) 718
PpsI GAGTC 1 cut(s) 718
Psp1406I AACGTT 1 cut(s) 140
Psp6I CCWGG 3 cut(s) 161, 565, 687
PspGI CCWGG 3 cut(s) 161, 565, 687
PspN4I GGNNCC 3 cut(s) 9, 595, 611
PspPI GGNCC 4 cut(s) 219, 243, 563, 593
RsaI GTAC 2 cut(s) 91, 526
RsaNI GTAC 2 cut(s) 90, 525
SaqAI TTAA 2 cut(s) 531, 546
SatI GCNGC 3 cut(s) 6, 55, 776
Sau3AI GATC 1 cut(s) 66
Sau96I GGNCC 4 cut(s) 219, 243, 563, 593
SchI GAGTC 1 cut(s) 719
ScrFI CCNGG 5 cut(s) 45, 163, 242, 567, 689
SduI GDGCHC 3 cut(s) 372, 397, 404
SinI GGWCC 1 cut(s) 563
SmlI CTYRAG 1 cut(s) 714
SmoI CTYRAG 1 cut(s) 714
Sse9I AATT 3 cut(s) 111, 205, 385
SseBI AGGCCT 1 cut(s) 687
SsiI CCGC 3 cut(s) 5, 378, 768
StuI AGGCCT 1 cut(s) 687
StyD4I CCNGG 5 cut(s) 43, 161, 240, 565, 687
StyI CCWWGG 1 cut(s) 641
TaaI ACNGT 3 cut(s) 521, 631, 737
TaiI ACGT 1 cut(s) 143
TaqI TCGA 1 cut(s) 648
TasI AATT 3 cut(s) 111, 205, 385
TatI WGTACW 1 cut(s) 89
TauI GCSGC 1 cut(s) 8
TfiI GAWTC 2 cut(s) 313, 466
Tru1I TTAA 2 cut(s) 531, 546
Tru9I TTAA 2 cut(s) 531, 546
TscAI CASTG 2 cut(s) 253, 634
TseFI GTSAC 2 cut(s) 97, 277
TseI GCWGC 2 cut(s) 54, 775
Tsp45I GTSAC 2 cut(s) 97, 277
TspDTI ATGAA 2 cut(s) 451, 610
TspGWI ACGGA 1 cut(s) 380
TspRI CASTG 2 cut(s) 253, 634
VneI GTGCAC 1 cut(s) 400
VpaK11BI GGWCC 1 cut(s) 563
XapI RAATTY 1 cut(s) 385
XceI RCATGY 1 cut(s) 662
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.