Rmu_sc0006590.1_g000005

PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006590.1
OG0001652
Physical Location & Seq
Reverse (-)
12151 .. 14379
2229 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006590.1_g000005.1.cds

Sequence Viewer

Length: 726 bp
atggcagcttctttgtcaaatgttgcatcgcttccgggctgtgtgagcgtgtcacagattagagctttggcccctccgtgtaactcatccgcggttgcaccatttccgtcttcttcttcttccgccaaaacggcgccgttgtcgtcgtccagcttcttctccaggtcgctgcgtttgtcccccctcacattgagccccagctcgaagagaaggactgttagctcggtccgtgccagcgctgaggaaccagcattgcaggcgaaagtgaccaacaaggtgtattttgatgttagcattggtaatccggtagggaagctggccggaaggattgtcattgggttgtttggtgatgatgtgccccaaactgtggagaatttccgttccctttgcacaggtgagaaaggctttgggtacaagggttctgccttccatcgtgtgatcaaggatttcatgattcaaggaggggacttcgataagggcaatgtggtgcttcatactggaccaggagttcttagcatggcgaatgcaggccccaataccaatggaagtcagttcttcatatgcacggtacagacgccatggctaaatgggaggcacgttgtgtttgggcaagttttggaaggcatggaaattgttaggctgatcgagtcacaggagacagatagaggtgaccgtcctacaaagaaggtagtcattgctgactgcggagagcttccagtagcctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pro_isomerase

Protein Analysis

241

Amino Acids

25.42

Weight (kDa)

9.22

Isoelectric Point (pI)

46.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 133
AccB7I CCANNNNNTGG 1 cut(s) 367
AccII CGCG 1 cut(s) 92
AciI CCGC 4 cut(s) 90, 92, 123, 705
AcoI YGGCCR 1 cut(s) 318
AcsI RAATTY 1 cut(s) 373
AcyI GRCGYC 2 cut(s) 134, 575
AdeI CACNNNGTG 1 cut(s) 601
AfaI GTAC 2 cut(s) 413, 570
AfeI AGCGCT 1 cut(s) 238
AfiI CCNNNNNNNGG 1 cut(s) 367
AgsI TTSAA 1 cut(s) 458
AjnI CCWGG 2 cut(s) 161, 502
AloI GAACNNNNNNTCC 2 cut(s) 492, 524
AluBI AGCT 7 cut(s) 8, 65, 153, 201, 222, 316, 712
AluI AGCT 7 cut(s) 8, 65, 153, 201, 222, 316, 712
Alw26I GTCTC 1 cut(s) 650
Aor51HI AGCGCT 1 cut(s) 238
AoxI GGCC 3 cut(s) 69, 318, 529
ApeKI GCWGC 2 cut(s) 5, 169
ApoI RAATTY 1 cut(s) 373
AspLEI GCGC 2 cut(s) 136, 239
AspS9I GGNCC 4 cut(s) 70, 226, 500, 530
AsuC2I CCSGG 1 cut(s) 36
AsuHPI GGTGA 3 cut(s) 359, 407, 680
AvaII GGWCC 2 cut(s) 226, 500
BaeGI GKGCMC 1 cut(s) 360
BaeI ACNNNNGTAYC 2 cut(s) 403, 436
BanI GGYRCC 1 cut(s) 133
BanII GRGCYC 1 cut(s) 197
BbsI GAAGAC 1 cut(s) 102
BbvCI CCTCAGC 1 cut(s) 240
BbvI GCAGC 2 cut(s) 17, 156
BccI CCATC 1 cut(s) 438
BceAI ACGGC 2 cut(s) 121, 147
BciT130I CCWGG 2 cut(s) 163, 504
BclI TGATCA 1 cut(s) 438
BcnI CCSGG 1 cut(s) 36
BcoDI GTCTC 1 cut(s) 650
BfoI RGCGCY 2 cut(s) 137, 240
BglI GCCNNNNNGGC 1 cut(s) 131
BisI GCNGC 2 cut(s) 6, 170
BlsI GCNGC 2 cut(s) 7, 171
Bme1390I CCNGG 3 cut(s) 36, 163, 504
Bme18I GGWCC 2 cut(s) 226, 500
BmgT120I GGNCC 4 cut(s) 70, 226, 500, 530
BmiI GGNNCC 4 cut(s) 72, 135, 246, 532
BmrFI CCNGG 3 cut(s) 36, 163, 504
BmsI GCATC 1 cut(s) 35
BpiI GAAGAC 1 cut(s) 102
BpmI CTGGAG 1 cut(s) 145
Bpu10I CCTNAGC 1 cut(s) 240
BpuMI CCSGG 1 cut(s) 36
BsaHI GRCGYC 2 cut(s) 134, 575
BsaJI CCNNGG 2 cut(s) 90, 578
BsaWI WCCGGW 1 cut(s) 304
Bsc4I CCNNNNNNNGG 1 cut(s) 367
Bse1I ACTGG 2 cut(s) 502, 716
Bse3DI GCAATG 3 cut(s) 251, 487, 693
BseBI CCWGG 2 cut(s) 163, 504
BseDI CCNNGG 2 cut(s) 90, 578
BseGI GGATG 1 cut(s) 86
BseLI CCNNNNNNNGG 1 cut(s) 367
BseMI GCAATG 3 cut(s) 251, 487, 693
BseMII CTCAG 1 cut(s) 231
BseNI ACTGG 2 cut(s) 502, 716
BseSI GKGCMC 1 cut(s) 360
BseXI GCAGC 2 cut(s) 17, 156
BseYI CCCAGC 1 cut(s) 197
Bsh1236I CGCG 1 cut(s) 92
BshFI GGCC 3 cut(s) 71, 320, 531
BshNI GGYRCC 1 cut(s) 133
BsiSI CCGG 3 cut(s) 35, 305, 321
BslFI GGGAC 2 cut(s) 163, 479
BslI CCNNNNNNNGG 1 cut(s) 367
BsmAI GTCTC 1 cut(s) 650
BsmFI GGGAC 2 cut(s) 163, 479
BsmI GAATGC 1 cut(s) 529
BsnI GGCC 3 cut(s) 71, 320, 531
Bsp1286I GDGCHC 2 cut(s) 197, 360
Bsp143I GATC 2 cut(s) 438, 642
Bsp19I CCATGG 1 cut(s) 578
BspACI CCGC 4 cut(s) 90, 92, 123, 705
BspANI GGCC 3 cut(s) 71, 320, 531
BspCNI CTCAG 1 cut(s) 232
BspFNI CGCG 1 cut(s) 92
BspHI TCATGA 1 cut(s) 450
BspLI GGNNCC 4 cut(s) 72, 135, 246, 532
BspT107I GGYRCC 1 cut(s) 133
BsrDI GCAATG 3 cut(s) 251, 487, 693
BsrI ACTGG 2 cut(s) 502, 716
BssECI CCNNGG 2 cut(s) 90, 578
BssMI GATC 2 cut(s) 438, 642
BssNI GRCGYC 2 cut(s) 134, 575
BssT1I CCWWGG 1 cut(s) 578
Bst2UI CCWGG 2 cut(s) 163, 504
Bst4CI ACNGT 4 cut(s) 217, 367, 568, 674
Bst6I CTCTTC 1 cut(s) 200
BstACI GRCGYC 2 cut(s) 134, 575
BstC8I GCNNGC 4 cut(s) 235, 258, 318, 529
BstDEI CTNAG 2 cut(s) 240, 512
BstDSI CCRYGG 2 cut(s) 90, 578
BstEII GGTNACC 1 cut(s) 668
BstF5I GGATG 1 cut(s) 86
BstFNI CGCG 1 cut(s) 92
BstH2I RGCGCY 2 cut(s) 137, 240
BstHHI GCGC 2 cut(s) 136, 239
BstKTI GATC 2 cut(s) 441, 645
BstMAI GTCTC 1 cut(s) 650
BstMBI GATC 2 cut(s) 438, 642
BstMWI GCNNNNNNNGC 3 cut(s) 45, 131, 257
BstNI CCWGG 2 cut(s) 163, 504
BstPI GGTNACC 1 cut(s) 668
BstSCI CCNGG 3 cut(s) 34, 161, 502
BstSLI GKGCMC 1 cut(s) 360
BstUI CGCG 1 cut(s) 92
BstV1I GCAGC 2 cut(s) 17, 156
BstV2I GAAGAC 1 cut(s) 102
BsuRI GGCC 3 cut(s) 71, 320, 531
BtgI CCRYGG 2 cut(s) 90, 578
BtgZI GCGATG 1 cut(s) 12
BtsCI GGATG 1 cut(s) 86
Cac8I GCNNGC 4 cut(s) 235, 258, 318, 529
CciI TCATGA 1 cut(s) 450
CfoI GCGC 2 cut(s) 136, 239
Cfr13I GGNCC 4 cut(s) 70, 226, 500, 530
Cfr42I CCGCGG 1 cut(s) 93
CpoI CGGWCCG 1 cut(s) 226
CseI GACGC 1 cut(s) 583
Csp6I GTAC 2 cut(s) 412, 569
CspI CGGWCCG 1 cut(s) 226
CviAII CATG 4 cut(s) 451, 517, 579, 625
CviQI GTAC 2 cut(s) 412, 569
DdeI CTNAG 2 cut(s) 240, 512
DinI GGCGCC 1 cut(s) 135
DpnI GATC 2 cut(s) 440, 644
DpnII GATC 2 cut(s) 438, 642
DraIII CACNNNGTG 1 cut(s) 601
EaeI YGGCCR 1 cut(s) 318
Eam1104I CTCTTC 1 cut(s) 200
EarI CTCTTC 1 cut(s) 200
EciI GGCGGA 1 cut(s) 112
Eco130I CCWWGG 1 cut(s) 578
Eco24I GRGCYC 1 cut(s) 197
Eco47I GGWCC 2 cut(s) 226, 500
Eco47III AGCGCT 1 cut(s) 238
Eco91I GGTNACC 1 cut(s) 668
EcoO109I RGGNCCY 1 cut(s) 530
EcoO65I GGTNACC 1 cut(s) 668
EcoRII CCWGG 2 cut(s) 161, 502
EcoT14I CCWWGG 1 cut(s) 578
EcoT38I GRGCYC 1 cut(s) 197
EgeI GGCGCC 1 cut(s) 135
EheI GGCGCC 1 cut(s) 135
ErhI CCWWGG 1 cut(s) 578
FaeI CATG 4 cut(s) 454, 520, 582, 628
FaiI YATR 7 cut(s) 452, 495, 518, 560, 562, 580, 626
FaqI GGGAC 2 cut(s) 163, 479
FatI CATG 4 cut(s) 450, 516, 578, 624
FauNDI CATATG 1 cut(s) 560
FbaI TGATCA 1 cut(s) 438
Fnu4HI GCNGC 2 cut(s) 6, 170
FokI GGATG 1 cut(s) 73
FriOI GRGCYC 1 cut(s) 197
Fsp4HI GCNGC 2 cut(s) 6, 170
GlaI GCGC 2 cut(s) 135, 238
GluI GCNGC 2 cut(s) 6, 170
GsaI CCCAGC 1 cut(s) 201
GsuI CTGGAG 1 cut(s) 145
HaeII RGCGCY 2 cut(s) 137, 240
HaeIII GGCC 3 cut(s) 71, 320, 531
HapII CCGG 3 cut(s) 35, 305, 321
HgaI GACGC 1 cut(s) 583
HhaI GCGC 2 cut(s) 136, 239
Hin1I GRCGYC 2 cut(s) 134, 575
Hin1II CATG 4 cut(s) 454, 520, 582, 628
Hin6I GCGC 2 cut(s) 134, 237
HinP1I GCGC 2 cut(s) 134, 237
HinfI GANTC 2 cut(s) 454, 647
HpaII CCGG 3 cut(s) 35, 305, 321
HphI GGTGA 3 cut(s) 359, 407, 680
Hpy188III TCNNGA 1 cut(s) 451
Hpy99I CGWCG 1 cut(s) 148
HpyAV CCTTC 5 cut(s) 204, 318, 436, 614, 679
HpyCH4III ACNGT 4 cut(s) 217, 367, 568, 674
HpyCH4IV ACGT 1 cut(s) 597
HpyCH4V TGCA 6 cut(s) 26, 98, 256, 390, 527, 564
HpyF10VI GCNNNNNNNGC 3 cut(s) 45, 131, 257
HpyF3I CTNAG 2 cut(s) 240, 512
HpySE526I ACGT 1 cut(s) 597
Hsp92I GRCGYC 2 cut(s) 134, 575
Hsp92II CATG 4 cut(s) 454, 520, 582, 628
HspAI GCGC 2 cut(s) 134, 237
KasI GGCGCC 1 cut(s) 133
Ksp22I TGATCA 1 cut(s) 438
KspI CCGCGG 1 cut(s) 93
Kzo9I GATC 2 cut(s) 438, 642
Lsp1109I GCAGC 2 cut(s) 17, 156
LweI GCATC 1 cut(s) 35
MaeII ACGT 1 cut(s) 597
MaeIII GTNAC 5 cut(s) 51, 80, 265, 648, 668
MalI GATC 2 cut(s) 440, 644
MboI GATC 2 cut(s) 438, 642
MboII GAAGA 7 cut(s) 102, 105, 108, 111, 148, 217, 547
MhlI GDGCHC 2 cut(s) 197, 360
MluCI AATT 2 cut(s) 373, 630
Mly113I GGCGCC 1 cut(s) 134
MlyI GAGTC 1 cut(s) 656
MnlI CCTC 6 cut(s) 84, 194, 235, 455, 585, 659
MspA1I CMGCKG 1 cut(s) 92
MspI CCGG 3 cut(s) 35, 305, 321
MspR9I CCNGG 3 cut(s) 36, 163, 504
Mva1269I GAATGC 1 cut(s) 529
MvaI CCWGG 2 cut(s) 163, 504
MvnI CGCG 1 cut(s) 92
MwoI GCNNNNNNNGC 3 cut(s) 45, 131, 257
NarI GGCGCC 1 cut(s) 134
NciI CCSGG 1 cut(s) 36
NcoI CCATGG 1 cut(s) 578
NdeI CATATG 1 cut(s) 560
NdeII GATC 2 cut(s) 438, 642
NlaIII CATG 4 cut(s) 454, 520, 582, 628
NlaIV GGNNCC 4 cut(s) 72, 135, 246, 532
NmuCI GTSAC 4 cut(s) 51, 265, 648, 668
PagI TCATGA 1 cut(s) 450
PctI GAATGC 1 cut(s) 529
PfeI GAWTC 1 cut(s) 454
PflMI CCANNNNNTGG 1 cut(s) 367
PkrI GCNGC 2 cut(s) 7, 171
PleI GAGTC 1 cut(s) 655
PluTI GGCGCC 1 cut(s) 137
PpsI GAGTC 1 cut(s) 655
Psp6I CCWGG 2 cut(s) 161, 502
PspEI GGTNACC 1 cut(s) 668
PspFI CCCAGC 1 cut(s) 197
PspGI CCWGG 2 cut(s) 161, 502
PspN4I GGNNCC 4 cut(s) 72, 135, 246, 532
PspPI GGNCC 4 cut(s) 70, 226, 500, 530
RsaI GTAC 2 cut(s) 413, 570
RsaNI GTAC 2 cut(s) 412, 569
Rsr2I CGGWCCG 1 cut(s) 226
RsrII CGGWCCG 1 cut(s) 226
SacII CCGCGG 1 cut(s) 93
SatI GCNGC 2 cut(s) 6, 170
Sau3AI GATC 2 cut(s) 438, 642
Sau96I GGNCC 4 cut(s) 70, 226, 500, 530
SchI GAGTC 1 cut(s) 656
ScrFI CCNGG 3 cut(s) 36, 163, 504
SduI GDGCHC 2 cut(s) 197, 360
SfaNI GCATC 1 cut(s) 35
SfoI GGCGCC 1 cut(s) 135
Sfr303I CCGCGG 1 cut(s) 93
SgrBI CCGCGG 1 cut(s) 93
SinI GGWCC 2 cut(s) 226, 500
Sse9I AATT 2 cut(s) 373, 630
SsiI CCGC 4 cut(s) 90, 92, 123, 705
SspDI GGCGCC 1 cut(s) 133
StyD4I CCNGG 3 cut(s) 34, 161, 502
StyI CCWWGG 1 cut(s) 578
TaaI ACNGT 4 cut(s) 217, 367, 568, 674
TaiI ACGT 1 cut(s) 600
TaqI TCGA 3 cut(s) 203, 471, 645
TaqII GACCGA 1 cut(s) 214
TasI AATT 2 cut(s) 373, 630
TfiI GAWTC 1 cut(s) 454
TseFI GTSAC 4 cut(s) 51, 265, 648, 668
TseI GCWGC 2 cut(s) 5, 169
Tsp45I GTSAC 4 cut(s) 51, 265, 648, 668
TspDTI ATGAA 3 cut(s) 439, 482, 547
TspGWI ACGGA 4 cut(s) 66, 96, 218, 368
Van91I CCANNNNNTGG 1 cut(s) 367
VpaK11BI GGWCC 2 cut(s) 226, 500
XapI RAATTY 1 cut(s) 373
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.