Rh2BG430300

PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0001652
Physical Location & Seq
Forward (+)
60981824 .. 60982243
420 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG430300.1

Sequence Viewer

Length: 210 bp
ATGGCAAATGCAGGCCCCAATACCAATGGAAGTCAGTTCTTCATATGCACAGTACAGACGCCATGGCTAAATGGGAGGCACGTTGTGTTTGGGCAAGTTTTGGAAGGCATGGAAATTGTTAGGCTGATCGAGTCGCAGGAGACAGATAGAGGTGACCGTCCTACAAAGAAGGTAGTCATTGCTGACTGCGGAGAGCTTCCAGTAGCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pro_isomerase

Protein Analysis

69

Amino Acids

7.54

Weight (kDa)

5.12

Isoelectric Point (pI)

31.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pro_isomerase PF00160 1 - 64 5.4e-22 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 189
AcyI GRCGYC 1 cut(s) 59
AdeI CACNNNGTG 1 cut(s) 85
AfaI GTAC 1 cut(s) 54
AluBI AGCT 1 cut(s) 196
AluI AGCT 1 cut(s) 196
Alw26I GTCTC 1 cut(s) 134
AoxI GGCC 1 cut(s) 13
AspS9I GGNCC 1 cut(s) 14
AsuHPI GGTGA 1 cut(s) 164
BcoDI GTCTC 1 cut(s) 134
BmgT120I GGNCC 1 cut(s) 14
BmiI GGNNCC 1 cut(s) 16
BsaHI GRCGYC 1 cut(s) 59
BsaJI CCNNGG 1 cut(s) 62
Bse1I ACTGG 1 cut(s) 200
Bse3DI GCAATG 1 cut(s) 177
BseDI CCNNGG 1 cut(s) 62
BseMI GCAATG 1 cut(s) 177
BseNI ACTGG 1 cut(s) 200
BshFI GGCC 1 cut(s) 15
BsmAI GTCTC 1 cut(s) 134
BsnI GGCC 1 cut(s) 15
Bsp143I GATC 1 cut(s) 126
Bsp19I CCATGG 1 cut(s) 62
BspACI CCGC 1 cut(s) 189
BspANI GGCC 1 cut(s) 15
BspLI GGNNCC 1 cut(s) 16
BsrDI GCAATG 1 cut(s) 177
BsrI ACTGG 1 cut(s) 200
BssECI CCNNGG 1 cut(s) 62
BssMI GATC 1 cut(s) 126
BssNI GRCGYC 1 cut(s) 59
BssT1I CCWWGG 1 cut(s) 62
Bst4CI ACNGT 2 cut(s) 52, 158
BstACI GRCGYC 1 cut(s) 59
BstC8I GCNNGC 1 cut(s) 13
BstDSI CCRYGG 1 cut(s) 62
BstEII GGTNACC 1 cut(s) 152
BstKTI GATC 1 cut(s) 129
BstMAI GTCTC 1 cut(s) 134
BstMBI GATC 1 cut(s) 126
BstPI GGTNACC 1 cut(s) 152
BsuRI GGCC 1 cut(s) 15
BtgI CCRYGG 1 cut(s) 62
Cac8I GCNNGC 1 cut(s) 13
Cfr13I GGNCC 1 cut(s) 14
CseI GACGC 1 cut(s) 67
Csp6I GTAC 1 cut(s) 53
CviAII CATG 2 cut(s) 63, 109
CviJI RGCY 5 cut(s) 15, 67, 124, 196, 206
CviKI_1 RGCY 5 cut(s) 15, 67, 124, 196, 206
CviQI GTAC 1 cut(s) 53
DpnI GATC 1 cut(s) 128
DpnII GATC 1 cut(s) 126
DraIII CACNNNGTG 1 cut(s) 85
Eco130I CCWWGG 1 cut(s) 62
Eco91I GGTNACC 1 cut(s) 152
EcoO109I RGGNCCY 1 cut(s) 14
EcoO65I GGTNACC 1 cut(s) 152
EcoT14I CCWWGG 1 cut(s) 62
ErhI CCWWGG 1 cut(s) 62
FaeI CATG 2 cut(s) 66, 112
FaiI YATR 4 cut(s) 44, 46, 64, 110
FatI CATG 2 cut(s) 62, 108
FauNDI CATATG 1 cut(s) 44
HaeIII GGCC 1 cut(s) 15
HgaI GACGC 1 cut(s) 67
Hin1I GRCGYC 1 cut(s) 59
Hin1II CATG 2 cut(s) 66, 112
HinfI GANTC 1 cut(s) 131
HphI GGTGA 1 cut(s) 164
HpyAV CCTTC 2 cut(s) 98, 163
HpyCH4III ACNGT 2 cut(s) 52, 158
HpyCH4IV ACGT 1 cut(s) 81
HpyCH4V TGCA 2 cut(s) 11, 48
HpySE526I ACGT 1 cut(s) 81
Hsp92I GRCGYC 1 cut(s) 59
Hsp92II CATG 2 cut(s) 66, 112
Kzo9I GATC 1 cut(s) 126
LpnPI CCDG 1 cut(s) 122
MaeII ACGT 1 cut(s) 81
MaeIII GTNAC 1 cut(s) 152
MalI GATC 1 cut(s) 128
MboI GATC 1 cut(s) 126
MboII GAAGA 1 cut(s) 31
MluCI AATT 1 cut(s) 114
MlyI GAGTC 1 cut(s) 140
MnlI CCTC 2 cut(s) 69, 143
NcoI CCATGG 1 cut(s) 62
NdeI CATATG 1 cut(s) 44
NdeII GATC 1 cut(s) 126
NlaIII CATG 2 cut(s) 66, 112
NlaIV GGNNCC 1 cut(s) 16
NmuCI GTSAC 1 cut(s) 152
PleI GAGTC 1 cut(s) 139
PpsI GAGTC 1 cut(s) 139
PspEI GGTNACC 1 cut(s) 152
PspN4I GGNNCC 1 cut(s) 16
PspPI GGNCC 1 cut(s) 14
RsaI GTAC 1 cut(s) 54
RsaNI GTAC 1 cut(s) 53
Sau3AI GATC 1 cut(s) 126
Sau96I GGNCC 1 cut(s) 14
SchI GAGTC 1 cut(s) 140
SetI ASST 4 cut(s) 84, 154, 174, 198
SgeI CNNG 7 cut(s) 24, 75, 92, 107, 121, 142, 149
Sse9I AATT 1 cut(s) 114
SsiI CCGC 1 cut(s) 189
StyI CCWWGG 1 cut(s) 62
TaaI ACNGT 2 cut(s) 52, 158
TaiI ACGT 1 cut(s) 84
TaqI TCGA 1 cut(s) 129
TasI AATT 1 cut(s) 114
TatI WGTACW 1 cut(s) 52
TseFI GTSAC 1 cut(s) 152
Tsp45I GTSAC 1 cut(s) 152
TspDTI ATGAA 1 cut(s) 31
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.