Rmu_sc0010349.1_g000005

PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0010349.1
Physical Location & Seq
Reverse (-)
36085 .. 36621
537 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0010349.1_g000005.1.cds

Sequence Viewer

Length: 243 bp
atggttgcgtctttttcggatattgattatgagatgttacacgactgccccaataccaatggaagtcagttcttcatatgcacagtacagacgccatggctaaatgggaggcacgttgtgtttgggcaagttttggaaggcatggaaattgttaggctgatcgagtcgcaggagacagatagaggtgaccgtcctacaaagaaggtagtcattgctgactgcggagagcttccagtagcctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

80

Amino Acids

8.96

Weight (kDa)

4.57

Isoelectric Point (pI)

28.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 222
AcyI GRCGYC 1 cut(s) 92
AdeI CACNNNGTG 1 cut(s) 118
AfaI GTAC 1 cut(s) 87
AluBI AGCT 1 cut(s) 229
AluI AGCT 1 cut(s) 229
Alw26I GTCTC 1 cut(s) 167
AsuHPI GGTGA 1 cut(s) 197
BcoDI GTCTC 1 cut(s) 167
BsaHI GRCGYC 1 cut(s) 92
BsaJI CCNNGG 1 cut(s) 95
Bse1I ACTGG 1 cut(s) 233
Bse3DI GCAATG 1 cut(s) 210
BseDI CCNNGG 1 cut(s) 95
BseMI GCAATG 1 cut(s) 210
BseNI ACTGG 1 cut(s) 233
BsmAI GTCTC 1 cut(s) 167
Bsp143I GATC 1 cut(s) 159
Bsp19I CCATGG 1 cut(s) 95
BspACI CCGC 1 cut(s) 222
BsrDI GCAATG 1 cut(s) 210
BsrI ACTGG 1 cut(s) 233
BssECI CCNNGG 1 cut(s) 95
BssMI GATC 1 cut(s) 159
BssNI GRCGYC 1 cut(s) 92
BssT1I CCWWGG 1 cut(s) 95
Bst4CI ACNGT 2 cut(s) 85, 191
BstACI GRCGYC 1 cut(s) 92
BstDSI CCRYGG 1 cut(s) 95
BstEII GGTNACC 1 cut(s) 185
BstKTI GATC 1 cut(s) 162
BstMAI GTCTC 1 cut(s) 167
BstMBI GATC 1 cut(s) 159
BstPI GGTNACC 1 cut(s) 185
BtgI CCRYGG 1 cut(s) 95
CseI GACGC 1 cut(s) 100
Csp6I GTAC 1 cut(s) 86
CviAII CATG 2 cut(s) 96, 142
CviJI RGCY 4 cut(s) 100, 157, 229, 239
CviKI_1 RGCY 4 cut(s) 100, 157, 229, 239
CviQI GTAC 1 cut(s) 86
DpnI GATC 1 cut(s) 161
DpnII GATC 1 cut(s) 159
DraIII CACNNNGTG 1 cut(s) 118
Eco130I CCWWGG 1 cut(s) 95
Eco91I GGTNACC 1 cut(s) 185
EcoO65I GGTNACC 1 cut(s) 185
EcoT14I CCWWGG 1 cut(s) 95
ErhI CCWWGG 1 cut(s) 95
FaeI CATG 2 cut(s) 99, 145
FaiI YATR 5 cut(s) 30, 77, 79, 97, 143
FatI CATG 2 cut(s) 95, 141
FauNDI CATATG 1 cut(s) 77
HgaI GACGC 1 cut(s) 100
Hin1I GRCGYC 1 cut(s) 92
Hin1II CATG 2 cut(s) 99, 145
HinfI GANTC 1 cut(s) 164
HphI GGTGA 1 cut(s) 197
Hpy188I TCNGA 1 cut(s) 19
HpyAV CCTTC 2 cut(s) 131, 196
HpyCH4III ACNGT 2 cut(s) 85, 191
HpyCH4IV ACGT 1 cut(s) 114
HpyCH4V TGCA 1 cut(s) 81
HpySE526I ACGT 1 cut(s) 114
Hsp92I GRCGYC 1 cut(s) 92
Hsp92II CATG 2 cut(s) 99, 145
Kzo9I GATC 1 cut(s) 159
LpnPI CCDG 1 cut(s) 155
MaeII ACGT 1 cut(s) 114
MaeIII GTNAC 2 cut(s) 36, 185
MalI GATC 1 cut(s) 161
MboI GATC 1 cut(s) 159
MboII GAAGA 1 cut(s) 64
MluCI AATT 1 cut(s) 147
MlyI GAGTC 1 cut(s) 173
MnlI CCTC 2 cut(s) 102, 176
NcoI CCATGG 1 cut(s) 95
NdeI CATATG 1 cut(s) 77
NdeII GATC 1 cut(s) 159
NlaIII CATG 2 cut(s) 99, 145
NmuCI GTSAC 1 cut(s) 185
PleI GAGTC 1 cut(s) 172
PpsI GAGTC 1 cut(s) 172
PspEI GGTNACC 1 cut(s) 185
RsaI GTAC 1 cut(s) 87
RsaNI GTAC 1 cut(s) 86
Sau3AI GATC 1 cut(s) 159
SchI GAGTC 1 cut(s) 173
SetI ASST 4 cut(s) 117, 187, 207, 231
SgeI CNNG 7 cut(s) 53, 108, 125, 140, 154, 175, 182
Sse9I AATT 1 cut(s) 147
SsiI CCGC 1 cut(s) 222
StyI CCWWGG 1 cut(s) 95
TaaI ACNGT 2 cut(s) 85, 191
TaiI ACGT 1 cut(s) 117
TaqI TCGA 1 cut(s) 162
TasI AATT 1 cut(s) 147
TatI WGTACW 1 cut(s) 85
TseFI GTSAC 1 cut(s) 185
Tsp45I GTSAC 1 cut(s) 185
TspDTI ATGAA 1 cut(s) 64
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.