Rh7AG305600

PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0001652
Physical Location & Seq
Forward (+)
34121460 .. 34125587
4128 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG305600.1

Sequence Viewer

Length: 327 bp
ATGATTCAAGAAGGGGACTTCGATAAGGGCAATGGTACTGGAGGCAAAAGCATTTATGGGCGTACATTTAAATATGAGAACTTTAAGTTGCTTCATACTGGACCAGGAGTTCTTAGCATGGCAAATGCAGGCCCCAATACCAATGGAAGTCAATTCTTCATATGCACAGTACAGACGCCATGGCTAAATGGGAGGCACGTTGTGTTTGGGCAAGTTTTGGAAGGCATGGAAATTGTTAGGCTGATCGAGTCGCAGGAGACAGATAAAGGTGACCGTCCTACAAAGAAGGTAGTCATTGCTGACTGCAAAGAGCTTCCAGTAGCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pro_isomerase

Protein Analysis

108

Amino Acids

11.83

Weight (kDa)

6.72

Isoelectric Point (pI)

14.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pro_isomerase PF00160 1 - 103 2.3e-30 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcyI GRCGYC 1 cut(s) 176
AdeI CACNNNGTG 1 cut(s) 202
AfaI GTAC 3 cut(s) 37, 64, 171
AgsI TTSAA 1 cut(s) 8
AjnI CCWGG 1 cut(s) 103
AloI GAACNNNNNNTCC 2 cut(s) 93, 125
AluBI AGCT 1 cut(s) 313
AluI AGCT 1 cut(s) 313
Alw26I GTCTC 1 cut(s) 251
AoxI GGCC 1 cut(s) 130
AspS9I GGNCC 2 cut(s) 101, 131
AsuHPI GGTGA 1 cut(s) 281
AvaII GGWCC 1 cut(s) 101
BciT130I CCWGG 1 cut(s) 105
BcoDI GTCTC 1 cut(s) 251
Bme1390I CCNGG 1 cut(s) 105
Bme18I GGWCC 1 cut(s) 101
BmgT120I GGNCC 2 cut(s) 101, 131
BmiI GGNNCC 1 cut(s) 133
BmrFI CCNGG 1 cut(s) 105
BpmI CTGGAG 1 cut(s) 60
BsaHI GRCGYC 1 cut(s) 176
BsaJI CCNNGG 1 cut(s) 179
Bse1I ACTGG 3 cut(s) 43, 103, 317
Bse3DI GCAATG 2 cut(s) 37, 294
BseBI CCWGG 1 cut(s) 105
BseDI CCNNGG 1 cut(s) 179
BseMI GCAATG 2 cut(s) 37, 294
BseNI ACTGG 3 cut(s) 43, 103, 317
BshFI GGCC 1 cut(s) 132
BslFI GGGAC 1 cut(s) 29
BsmAI GTCTC 1 cut(s) 251
BsmFI GGGAC 1 cut(s) 29
BsnI GGCC 1 cut(s) 132
Bsp143I GATC 1 cut(s) 243
Bsp19I CCATGG 1 cut(s) 179
BspANI GGCC 1 cut(s) 132
BspLI GGNNCC 1 cut(s) 133
BsrDI GCAATG 2 cut(s) 37, 294
BsrI ACTGG 3 cut(s) 43, 103, 317
BssECI CCNNGG 1 cut(s) 179
BssMI GATC 1 cut(s) 243
BssNI GRCGYC 1 cut(s) 176
BssT1I CCWWGG 1 cut(s) 179
Bst2UI CCWGG 1 cut(s) 105
Bst4CI ACNGT 2 cut(s) 169, 275
BstACI GRCGYC 1 cut(s) 176
BstC8I GCNNGC 1 cut(s) 130
BstDEI CTNAG 1 cut(s) 113
BstDSI CCRYGG 1 cut(s) 179
BstEII GGTNACC 1 cut(s) 269
BstKTI GATC 1 cut(s) 246
BstMAI GTCTC 1 cut(s) 251
BstMBI GATC 1 cut(s) 243
BstNI CCWGG 1 cut(s) 105
BstPI GGTNACC 1 cut(s) 269
BstSCI CCNGG 1 cut(s) 103
BsuRI GGCC 1 cut(s) 132
BtgI CCRYGG 1 cut(s) 179
Cac8I GCNNGC 1 cut(s) 130
Cfr13I GGNCC 2 cut(s) 101, 131
CseI GACGC 1 cut(s) 184
Csp6I GTAC 3 cut(s) 36, 63, 170
CviAII CATG 3 cut(s) 118, 180, 226
CviJI RGCY 5 cut(s) 132, 184, 241, 313, 323
CviKI_1 RGCY 5 cut(s) 132, 184, 241, 313, 323
CviQI GTAC 3 cut(s) 36, 63, 170
DdeI CTNAG 1 cut(s) 113
DpnI GATC 1 cut(s) 245
DpnII GATC 1 cut(s) 243
DraI TTTAAA 1 cut(s) 70
DraIII CACNNNGTG 1 cut(s) 202
Eco130I CCWWGG 1 cut(s) 179
Eco47I GGWCC 1 cut(s) 101
Eco91I GGTNACC 1 cut(s) 269
EcoO109I RGGNCCY 1 cut(s) 131
EcoO65I GGTNACC 1 cut(s) 269
EcoRII CCWGG 1 cut(s) 103
EcoT14I CCWWGG 1 cut(s) 179
ErhI CCWWGG 1 cut(s) 179
FaeI CATG 3 cut(s) 121, 183, 229
FaiI YATR 8 cut(s) 57, 75, 96, 119, 161, 163, 181, 227
FaqI GGGAC 1 cut(s) 29
FatI CATG 3 cut(s) 117, 179, 225
FauNDI CATATG 1 cut(s) 161
GsuI CTGGAG 1 cut(s) 60
HaeIII GGCC 1 cut(s) 132
HgaI GACGC 1 cut(s) 184
Hin1I GRCGYC 1 cut(s) 176
Hin1II CATG 3 cut(s) 121, 183, 229
HinfI GANTC 2 cut(s) 4, 248
HphI GGTGA 1 cut(s) 281
Hpy188III TCNNGA 1 cut(s) 8
HpyAV CCTTC 3 cut(s) 5, 215, 280
HpyCH4III ACNGT 2 cut(s) 169, 275
HpyCH4IV ACGT 1 cut(s) 198
HpyCH4V TGCA 3 cut(s) 128, 165, 306
HpyF3I CTNAG 1 cut(s) 113
HpySE526I ACGT 1 cut(s) 198
Hsp92I GRCGYC 1 cut(s) 176
Hsp92II CATG 3 cut(s) 121, 183, 229
Kzo9I GATC 1 cut(s) 243
LpnPI CCDG 6 cut(s) 24, 84, 90, 114, 117, 239
MaeII ACGT 1 cut(s) 198
MaeIII GTNAC 1 cut(s) 269
MalI GATC 1 cut(s) 245
MboI GATC 1 cut(s) 243
MboII GAAGA 1 cut(s) 148
MluCI AATT 2 cut(s) 152, 231
MlyI GAGTC 1 cut(s) 257
MnlI CCTC 2 cut(s) 35, 186
MseI TTAA 2 cut(s) 69, 84
MspR9I CCNGG 1 cut(s) 105
MvaI CCWGG 1 cut(s) 105
NcoI CCATGG 1 cut(s) 179
NdeI CATATG 1 cut(s) 161
NdeII GATC 1 cut(s) 243
NlaIII CATG 3 cut(s) 121, 183, 229
NlaIV GGNNCC 1 cut(s) 133
NmuCI GTSAC 1 cut(s) 269
PfeI GAWTC 1 cut(s) 4
PleI GAGTC 1 cut(s) 256
PpsI GAGTC 1 cut(s) 256
Psp6I CCWGG 1 cut(s) 103
PspEI GGTNACC 1 cut(s) 269
PspGI CCWGG 1 cut(s) 103
PspN4I GGNNCC 1 cut(s) 133
PspPI GGNCC 2 cut(s) 101, 131
RsaI GTAC 3 cut(s) 37, 64, 171
RsaNI GTAC 3 cut(s) 36, 63, 170
SaqAI TTAA 2 cut(s) 69, 84
Sau3AI GATC 1 cut(s) 243
Sau96I GGNCC 2 cut(s) 101, 131
SchI GAGTC 1 cut(s) 257
ScrFI CCNGG 1 cut(s) 105
SetI ASST 4 cut(s) 201, 271, 291, 315
SinI GGWCC 1 cut(s) 101
SmiI ATTTAAAT 1 cut(s) 70
Sse9I AATT 2 cut(s) 152, 231
StyD4I CCNGG 1 cut(s) 103
StyI CCWWGG 1 cut(s) 179
SwaI ATTTAAAT 1 cut(s) 70
TaaI ACNGT 2 cut(s) 169, 275
TaiI ACGT 1 cut(s) 201
TaqI TCGA 2 cut(s) 21, 246
TasI AATT 2 cut(s) 152, 231
TatI WGTACW 1 cut(s) 169
TfiI GAWTC 1 cut(s) 4
Tru1I TTAA 2 cut(s) 69, 84
Tru9I TTAA 2 cut(s) 69, 84
TseFI GTSAC 1 cut(s) 269
Tsp45I GTSAC 1 cut(s) 269
TspDTI ATGAA 2 cut(s) 83, 148
VpaK11BI GGWCC 1 cut(s) 101
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.