Prupe.1G321100_v2.0.a1

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000778
Physical Location & Seq
Reverse (-)
30778532 .. 30779945
1414 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G321100.1

Sequence Viewer

Length: 1005 bp
ATGGAGAATATCCTCCTTCCTTTATCTATAATCGTTCCCACGTCATTCATCGTGGCTCTCATTTTTCATGCTTTCAAGTTCAAATTATCCAATGCTTCTTCCAAAGCCAATCTTCCTCCAGGAAGTTTTGGATGGCCAATTATCGGTGAAACCTTTGCCTTCCTTAACCAGACACAGGAAAAGTTTGCAGGGTACAGAATTTGCTTCGGCGCCCACATCACGAGCAGAGGTTTTCTCAAAACTGAAGCTGTGGTTCGAAACGCAGTGAGTATGGATTGTATGGTTCAGGAACATTTGAAGCTTCACTGGGACGGCAAAAGCAGAGTTGAGGTGTATCACCTGGCTCAGCTACTTGTGATGACTCTATCATCTAGCTTCTTTACTGGACTCCAAGACAATCAAGAGCGCAGTGCAAAGCTTACCAGATTGACCAATGAGAAGAAAGCAGCTATGTCCAGTGGTGCCAATGAGATCAAAATAAATGACATCATGTCTCATTTGCTGTTTAATCCGGATCCCACTGGGCGGTTCATGCCAGAGAATGAAGTTGCTGATAAAGTTATGGGCTTGATGATGGGTGGATTTCACTCGCCTTCCATGGCTACAAGTTTCCTTGTCAAATATCTTGGTGAAGGACCTGACATTTGTGACAAAGTCCAAACAGATTTGGAATTAACCCTGCATATTGCAAGGTCAAAAGAATCTGGCAGCACAAACAAAAACACCGAGAATTTCGGTGCACCGGAAGTGTTTGACACGAGCAGGTTTGAGAATGGAAAAGCTCCACAGGCTCACTCTAACTTCCCATTTGGCAGCGGTCCTCGAATTTGTCCTGGAAAAGAATACGCGAGACTCCAGCTTCTCTGTTTCTTGCATCGCCTCGTTACTAGGTACAAATTTCAAGTGTTGAATCCATGCGCCAAGATTGCAGGCGGCATGAACCCTGTACCAGAAGAAGGGTTTCACATTCGCCTCCAACCTTATATATGGCGTGGGGGTAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

335

Amino Acids

37.21

Weight (kDa)

8.82

Isoelectric Point (pI)

36.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 753
AccB1I GGYRCC 2 cut(s) 209, 461
AccII CGCG 1 cut(s) 848
AccIII TCCGGA 1 cut(s) 511
AciI CCGC 3 cut(s) 526, 816, 933
AclWI GGATC 2 cut(s) 509, 522
AcoI YGGCCR 1 cut(s) 134
AcsI RAATTY 4 cut(s) 198, 730, 825, 896
AcuI CTGAAG 1 cut(s) 264
AcyI GRCGYC 1 cut(s) 210
AfaI GTAC 3 cut(s) 194, 893, 948
AfiI CCNNNNNNNGG 4 cut(s) 143, 175, 525, 956
AgsI TTSAA 5 cut(s) 76, 82, 298, 902, 910
AhdI GACNNNNNGTC 1 cut(s) 490
AjiI CACGTC 1 cut(s) 42
AjnI CCWGG 3 cut(s) 118, 339, 832
AluBI AGCT 8 cut(s) 248, 301, 349, 375, 418, 449, 782, 859
AluI AGCT 8 cut(s) 248, 301, 349, 375, 418, 449, 782, 859
Alw21I GWGCWC 1 cut(s) 742
Alw26I GTCTC 2 cut(s) 498, 844
Alw44I GTGCAC 1 cut(s) 738
AlwI GGATC 2 cut(s) 509, 522
Aor13HI TCCGGA 1 cut(s) 511
AoxI GGCC 1 cut(s) 134
ApaLI GTGCAC 1 cut(s) 738
ApeKI GCWGC 3 cut(s) 446, 708, 813
ApoI RAATTY 4 cut(s) 198, 730, 825, 896
ArsI GACNNNNNNTTYG 2 cut(s) 627, 659
Asp700I GAANNNNTTC 1 cut(s) 960
AspLEI GCGC 3 cut(s) 212, 408, 920
AspS9I GGNCC 2 cut(s) 635, 818
AsuHPI GGTGA 3 cut(s) 158, 329, 641
AsuII TTCGAA 1 cut(s) 256
AvaII GGWCC 2 cut(s) 635, 818
BaeGI GKGCMC 1 cut(s) 742
BalI TGGCCA 1 cut(s) 136
BamHI GGATCC 1 cut(s) 514
BanI GGYRCC 2 cut(s) 209, 461
BauI CACGAG 2 cut(s) 220, 757
Bbv12I GWGCWC 1 cut(s) 742
BbvI GCAGC 3 cut(s) 458, 720, 825
BccI CCATC 2 cut(s) 126, 568
BceAI ACGGC 1 cut(s) 328
BciT130I CCWGG 3 cut(s) 120, 341, 834
BcoDI GTCTC 2 cut(s) 498, 844
BfaI CTAG 2 cut(s) 372, 888
BfoI RGCGCY 1 cut(s) 213
BfuAI ACCTGC 1 cut(s) 753
BisI GCNGC 4 cut(s) 447, 709, 814, 934
BlpI GCTNAGC 1 cut(s) 345
BlsI GCNGC 4 cut(s) 448, 710, 815, 935
Bme1390I CCNGG 3 cut(s) 120, 341, 834
Bme18I GGWCC 2 cut(s) 635, 818
BmeRI GACNNNNNGTC 1 cut(s) 490
BmgBI CACGTC 1 cut(s) 42
BmgT120I GGNCC 2 cut(s) 635, 818
BmiI GGNNCC 3 cut(s) 211, 463, 516
BmrFI CCNGG 3 cut(s) 120, 341, 834
BmrI ACTGGG 2 cut(s) 316, 531
BmsI GCATC 1 cut(s) 883
BmuI ACTGGG 2 cut(s) 316, 531
BplI GAGNNNNNCTC 2 cut(s) 219, 251
BpmI CTGGAG 2 cut(s) 102, 839
Bpu1102I GCTNAGC 1 cut(s) 345
Bpu14I TTCGAA 1 cut(s) 256
BsaHI GRCGYC 1 cut(s) 210
BsaJI CCNNGG 1 cut(s) 597
BsaWI WCCGGW 2 cut(s) 511, 742
Bsc4I CCNNNNNNNGG 4 cut(s) 143, 175, 525, 956
Bse1I ACTGG 4 cut(s) 311, 388, 456, 526
BseAI TCCGGA 1 cut(s) 511
BseBI CCWGG 3 cut(s) 120, 341, 834
BseDI CCNNGG 1 cut(s) 597
BseGI GGATG 1 cut(s) 137
BseLI CCNNNNNNNGG 4 cut(s) 143, 175, 525, 956
BseMII CTCAG 1 cut(s) 359
BseNI ACTGG 4 cut(s) 311, 388, 456, 526
BseSI GKGCMC 1 cut(s) 742
BseXI GCAGC 3 cut(s) 458, 720, 825
Bsh1236I CGCG 1 cut(s) 848
BshFI GGCC 1 cut(s) 136
BshNI GGYRCC 2 cut(s) 209, 461
BsiHKAI GWGCWC 1 cut(s) 742
BsiSI CCGG 2 cut(s) 512, 743
BslFI GGGAC 1 cut(s) 323
BslI CCNNNNNNNGG 4 cut(s) 143, 175, 525, 956
BsmAI GTCTC 2 cut(s) 498, 844
BsmFI GGGAC 1 cut(s) 323
BsnI GGCC 1 cut(s) 136
Bsp119I TTCGAA 1 cut(s) 256
Bsp1286I GDGCHC 1 cut(s) 742
Bsp13I TCCGGA 1 cut(s) 511
Bsp143I GATC 2 cut(s) 471, 514
Bsp1720I GCTNAGC 1 cut(s) 345
Bsp19I CCATGG 1 cut(s) 597
BspACI CCGC 3 cut(s) 526, 816, 933
BspANI GGCC 1 cut(s) 136
BspCNI CTCAG 1 cut(s) 358
BspEI TCCGGA 1 cut(s) 511
BspFNI CGCG 1 cut(s) 848
BspLI GGNNCC 3 cut(s) 211, 463, 516
BspMI ACCTGC 1 cut(s) 753
BspPI GGATC 2 cut(s) 509, 522
BspT104I TTCGAA 1 cut(s) 256
BspT107I GGYRCC 2 cut(s) 209, 461
BsrI ACTGG 4 cut(s) 311, 388, 456, 526
BssECI CCNNGG 1 cut(s) 597
BssMI GATC 2 cut(s) 471, 514
BssNI GRCGYC 1 cut(s) 210
BssSI CACGAG 2 cut(s) 220, 757
BssT1I CCWWGG 1 cut(s) 597
Bst2BI CACGAG 2 cut(s) 220, 757
Bst2UI CCWGG 3 cut(s) 120, 341, 834
BstACI GRCGYC 1 cut(s) 210
BstBI TTCGAA 1 cut(s) 256
BstC8I GCNNGC 1 cut(s) 931
BstDEI CTNAG 1 cut(s) 345
BstDSI CCRYGG 1 cut(s) 597
BstF5I GGATG 1 cut(s) 137
BstFNI CGCG 1 cut(s) 848
BstH2I RGCGCY 1 cut(s) 213
BstHHI GCGC 3 cut(s) 212, 408, 920
BstKTI GATC 2 cut(s) 474, 517
BstMAI GTCTC 2 cut(s) 498, 844
BstMBI GATC 2 cut(s) 471, 514
BstMWI GCNNNNNNNGC 3 cut(s) 532, 788, 926
BstNI CCWGG 3 cut(s) 120, 341, 834
BstSCI CCNGG 3 cut(s) 118, 339, 832
BstSLI GKGCMC 1 cut(s) 742
BstUI CGCG 1 cut(s) 848
BstV1I GCAGC 3 cut(s) 458, 720, 825
BstX2I RGATCY 1 cut(s) 514
BstYI RGATCY 1 cut(s) 514
BsuRI GGCC 1 cut(s) 136
BtgI CCRYGG 1 cut(s) 597
BtgZI GCGATG 1 cut(s) 860
BtrI CACGTC 1 cut(s) 42
BtsCI GGATG 1 cut(s) 137
BtsI GCAGTG 2 cut(s) 270, 415
BtsIMutI CAGTG 5 cut(s) 270, 304, 415, 463, 519
BveI ACCTGC 1 cut(s) 753
Cac8I GCNNGC 1 cut(s) 931
CfoI GCGC 3 cut(s) 212, 408, 920
Cfr13I GGNCC 2 cut(s) 635, 818
Csp6I GTAC 3 cut(s) 193, 892, 947
CviAII CATG 6 cut(s) 68, 490, 532, 598, 915, 937
CviQI GTAC 3 cut(s) 193, 892, 947
DdeI CTNAG 1 cut(s) 345
DinI GGCGCC 1 cut(s) 211
DpnI GATC 2 cut(s) 473, 516
DpnII GATC 2 cut(s) 471, 514
DriI GACNNNNNGTC 1 cut(s) 490
EaeI YGGCCR 1 cut(s) 134
Eam1105I GACNNNNNGTC 1 cut(s) 490
Eco130I CCWWGG 1 cut(s) 597
Eco47I GGWCC 2 cut(s) 635, 818
Eco57I CTGAAG 1 cut(s) 264
EcoO109I RGGNCCY 1 cut(s) 635
EcoRII CCWGG 3 cut(s) 118, 339, 832
EcoT14I CCWWGG 1 cut(s) 597
EgeI GGCGCC 1 cut(s) 211
EheI GGCGCC 1 cut(s) 211
ErhI CCWWGG 1 cut(s) 597
FaeI CATG 6 cut(s) 71, 493, 535, 601, 918, 940
FalI AAGNNNNNCTT 2 cut(s) 96, 128
FaqI GGGAC 1 cut(s) 323
FatI CATG 6 cut(s) 67, 489, 531, 597, 914, 936
Fnu4HI GCNGC 4 cut(s) 447, 709, 814, 934
FokI GGATG 1 cut(s) 144
Fsp4HI GCNGC 4 cut(s) 447, 709, 814, 934
FspBI CTAG 2 cut(s) 372, 888
GlaI GCGC 3 cut(s) 211, 407, 919
GluI GCNGC 4 cut(s) 447, 709, 814, 934
GsuI CTGGAG 2 cut(s) 102, 839
HaeII RGCGCY 1 cut(s) 213
HaeIII GGCC 1 cut(s) 136
HapII CCGG 2 cut(s) 512, 743
HhaI GCGC 3 cut(s) 212, 408, 920
Hin1I GRCGYC 1 cut(s) 210
Hin1II CATG 6 cut(s) 71, 493, 535, 601, 918, 940
Hin6I GCGC 3 cut(s) 210, 406, 918
HinP1I GCGC 3 cut(s) 210, 406, 918
HindIII AAGCTT 2 cut(s) 299, 416
HinfI GANTC 5 cut(s) 361, 387, 701, 852, 910
HpaII CCGG 2 cut(s) 512, 743
HphI GGTGA 3 cut(s) 158, 329, 641
Hpy166II GTNNAC 1 cut(s) 740
Hpy188III TCNNGA 4 cut(s) 220, 287, 401, 512
Hpy8I GTNNAC 1 cut(s) 740
HpyAV CCTTC 5 cut(s) 26, 169, 603, 626, 950
HpyCH4IV ACGT 1 cut(s) 41
HpyCH4V TGCA 7 cut(s) 188, 413, 682, 689, 740, 874, 929
HpyF10VI GCNNNNNNNGC 3 cut(s) 532, 788, 926
HpyF3I CTNAG 1 cut(s) 345
HpySE526I ACGT 1 cut(s) 41
Hsp92I GRCGYC 1 cut(s) 210
Hsp92II CATG 6 cut(s) 71, 493, 535, 601, 918, 940
HspAI GCGC 3 cut(s) 210, 406, 918
KasI GGCGCC 1 cut(s) 209
Kpn2I TCCGGA 1 cut(s) 511
Kzo9I GATC 2 cut(s) 471, 514
LmnI GCTCC 1 cut(s) 787
Lsp1109I GCAGC 3 cut(s) 458, 720, 825
LweI GCATC 1 cut(s) 883
MaeI CTAG 2 cut(s) 372, 888
MaeII ACGT 1 cut(s) 41
MaeIII GTNAC 2 cut(s) 647, 883
MalI GATC 2 cut(s) 473, 516
MboI GATC 2 cut(s) 471, 514
MboII GAAGA 4 cut(s) 90, 104, 451, 965
MflI RGATCY 1 cut(s) 514
MhlI GDGCHC 1 cut(s) 742
MlsI TGGCCA 1 cut(s) 136
MluCI AATT 8 cut(s) 83, 138, 198, 671, 730, 825, 896, 1000
MluNI TGGCCA 1 cut(s) 136
Mly113I GGCGCC 1 cut(s) 210
MlyI GAGTC 3 cut(s) 355, 381, 846
MmeI TCCRAC 1 cut(s) 1000
MnlI CCTC 7 cut(s) 23, 126, 221, 322, 831, 890, 983
Mox20I TGGCCA 1 cut(s) 136
MroI TCCGGA 1 cut(s) 511
MroXI GAANNNNTTC 1 cut(s) 960
MscI TGGCCA 1 cut(s) 136
MseI TTAA 3 cut(s) 165, 507, 674
Msp20I TGGCCA 1 cut(s) 136
MspA1I CMGCKG 1 cut(s) 816
MspI CCGG 2 cut(s) 512, 743
MspR9I CCNGG 3 cut(s) 120, 341, 834
MvaI CCWGG 3 cut(s) 120, 341, 834
MvnI CGCG 1 cut(s) 848
MwoI GCNNNNNNNGC 3 cut(s) 532, 788, 926
NarI GGCGCC 1 cut(s) 210
NcoI CCATGG 1 cut(s) 597
NdeII GATC 2 cut(s) 471, 514
NlaIII CATG 6 cut(s) 71, 493, 535, 601, 918, 940
NlaIV GGNNCC 3 cut(s) 211, 463, 516
NmuCI GTSAC 1 cut(s) 647
NspV TTCGAA 1 cut(s) 256
PdmI GAANNNNTTC 1 cut(s) 960
PfeI GAWTC 2 cut(s) 701, 910
PflFI GACNNNGTC 1 cut(s) 653
PfoI TCCNGGA 2 cut(s) 118, 832
PkrI GCNGC 4 cut(s) 448, 710, 815, 935
PleI GAGTC 3 cut(s) 355, 381, 846
PluTI GGCGCC 1 cut(s) 213
PpsI GAGTC 3 cut(s) 355, 381, 846
PpuMI RGGWCCY 1 cut(s) 635
Psp5II RGGWCCY 1 cut(s) 635
Psp6I CCWGG 3 cut(s) 118, 339, 832
PspGI CCWGG 3 cut(s) 118, 339, 832
PspN4I GGNNCC 3 cut(s) 211, 463, 516
PspPI GGNCC 2 cut(s) 635, 818
PspPPI RGGWCCY 1 cut(s) 635
PsuI RGATCY 1 cut(s) 514
PsyI GACNNNGTC 1 cut(s) 653
RsaI GTAC 3 cut(s) 194, 893, 948
RsaNI GTAC 3 cut(s) 193, 892, 947
SaqAI TTAA 3 cut(s) 165, 507, 674
SatI GCNGC 4 cut(s) 447, 709, 814, 934
Sau3AI GATC 2 cut(s) 471, 514
Sau96I GGNCC 2 cut(s) 635, 818
SchI GAGTC 3 cut(s) 355, 381, 846
ScrFI CCNGG 3 cut(s) 120, 341, 834
SduI GDGCHC 1 cut(s) 742
SfaNI GCATC 1 cut(s) 883
SfoI GGCGCC 1 cut(s) 211
SfuI TTCGAA 1 cut(s) 256
SinI GGWCC 2 cut(s) 635, 818
Sse9I AATT 8 cut(s) 83, 138, 198, 671, 730, 825, 896, 1000
SsiI CCGC 3 cut(s) 526, 816, 933
SspDI GGCGCC 1 cut(s) 209
SspMI CTAG 2 cut(s) 372, 888
StyD4I CCNGG 3 cut(s) 118, 339, 832
StyI CCWWGG 1 cut(s) 597
TaiI ACGT 1 cut(s) 44
TaqI TCGA 2 cut(s) 256, 823
TasI AATT 8 cut(s) 83, 138, 198, 671, 730, 825, 896, 1000
TauI GCSGC 1 cut(s) 936
TfiI GAWTC 2 cut(s) 701, 910
Tru1I TTAA 3 cut(s) 165, 507, 674
Tru9I TTAA 3 cut(s) 165, 507, 674
TscAI CASTG 5 cut(s) 270, 311, 415, 463, 526
TseFI GTSAC 1 cut(s) 647
TseI GCWGC 3 cut(s) 446, 708, 813
Tsp45I GTSAC 1 cut(s) 647
TspDTI ATGAA 5 cut(s) 37, 56, 520, 558, 953
TspRI CASTG 5 cut(s) 270, 311, 415, 463, 526
Tth111I GACNNNGTC 1 cut(s) 653
VneI GTGCAC 1 cut(s) 738
VpaK11BI GGWCC 2 cut(s) 635, 818
XapI RAATTY 4 cut(s) 198, 730, 825, 896
XmnI GAANNNNTTC 1 cut(s) 960
XspI CTAG 2 cut(s) 372, 888
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.