Rorug02G0286700

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
31291897 .. 31293815
1919 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0286700.1

Sequence Viewer

Length: 252 bp
ATGCAAGCTAGTGCACCATCTTTGTACGGCTCTGGGAGGAATGGAATGAATAGGGTTGGAGCTATGGAAATATCTGGCAGTAATGGAGTCGTACTTGGTAAATCCAACAATTACAAAAGTAACCTCCTTCTAGCAGCTTCTAGCTCCCAATCCATTTACCAATCTGCAGGAGTATCTTTTCCAAATCCACAAGCTCAAATTTCACCTGCCAATTACAATATTTATGCTCCAATCGACAACACTCAGAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

83

Amino Acids

8.61

Weight (kDa)

9.22

Isoelectric Point (pI)

52.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 214
Acc36I ACCTGC 1 cut(s) 214
AcsI RAATTY 1 cut(s) 198
AfaI GTAC 2 cut(s) 26, 93
AluBI AGCT 5 cut(s) 8, 62, 137, 144, 194
AluI AGCT 5 cut(s) 8, 62, 137, 144, 194
Alw21I GWGCWC 1 cut(s) 16
Alw44I GTGCAC 1 cut(s) 12
ApaLI GTGCAC 1 cut(s) 12
ApeKI GCWGC 1 cut(s) 134
ApoI RAATTY 1 cut(s) 198
AsuHPI GGTGA 1 cut(s) 195
BaeGI GKGCMC 1 cut(s) 16
Bbv12I GWGCWC 1 cut(s) 16
BbvI GCAGC 1 cut(s) 146
BccI CCATC 1 cut(s) 25
BceAI ACGGC 1 cut(s) 43
BfaI CTAG 3 cut(s) 9, 131, 141
BfmI CTRYAG 1 cut(s) 165
BfuAI ACCTGC 1 cut(s) 214
BisI GCNGC 1 cut(s) 135
BlsI GCNGC 1 cut(s) 136
BseSI GKGCMC 1 cut(s) 16
BseXI GCAGC 1 cut(s) 146
BsiHKAI GWGCWC 1 cut(s) 16
Bsp1286I GDGCHC 1 cut(s) 16
BspMAI CTGCAG 1 cut(s) 169
BspMI ACCTGC 1 cut(s) 214
BstC8I GCNNGC 1 cut(s) 6
BstDEI CTNAG 1 cut(s) 243
BstSFI CTRYAG 1 cut(s) 165
BstSLI GKGCMC 1 cut(s) 16
BstV1I GCAGC 1 cut(s) 146
BveI ACCTGC 1 cut(s) 214
Cac8I GCNNGC 1 cut(s) 6
Csp6I GTAC 2 cut(s) 25, 92
CviJI RGCY 6 cut(s) 8, 30, 62, 137, 144, 194
CviKI_1 RGCY 6 cut(s) 8, 30, 62, 137, 144, 194
CviQI GTAC 2 cut(s) 25, 92
DdeI CTNAG 1 cut(s) 243
FaiI YATR 2 cut(s) 65, 225
Fnu4HI GCNGC 1 cut(s) 135
Fsp4HI GCNGC 1 cut(s) 135
FspBI CTAG 3 cut(s) 9, 131, 141
GluI GCNGC 1 cut(s) 135
HinfI GANTC 1 cut(s) 87
HphI GGTGA 1 cut(s) 195
Hpy166II GTNNAC 1 cut(s) 14
Hpy188I TCNGA 1 cut(s) 246
Hpy8I GTNNAC 1 cut(s) 14
HpyAV CCTTC 1 cut(s) 137
HpyCH4V TGCA 3 cut(s) 4, 14, 167
HpyF3I CTNAG 1 cut(s) 243
LmnI GCTCC 3 cut(s) 59, 149, 232
LpnPI CCDG 4 cut(s) 18, 60, 153, 219
Lsp1109I GCAGC 1 cut(s) 146
MaeI CTAG 3 cut(s) 9, 131, 141
MaeIII GTNAC 1 cut(s) 119
MhlI GDGCHC 1 cut(s) 16
MluCI AATT 3 cut(s) 109, 198, 211
MlyI GAGTC 1 cut(s) 96
MmeI TCCRAC 2 cut(s) 37, 129
MnlI CCTC 2 cut(s) 30, 134
PaqCI CACCTGC 1 cut(s) 214
PkrI GCNGC 1 cut(s) 136
PleI GAGTC 1 cut(s) 95
PpsI GAGTC 1 cut(s) 95
PstI CTGCAG 1 cut(s) 169
RsaI GTAC 2 cut(s) 26, 93
RsaNI GTAC 2 cut(s) 25, 92
SatI GCNGC 1 cut(s) 135
SchI GAGTC 1 cut(s) 96
SduI GDGCHC 1 cut(s) 16
SetI ASST 7 cut(s) 10, 64, 126, 139, 146, 196, 208
SfcI CTRYAG 1 cut(s) 165
Sse9I AATT 3 cut(s) 109, 198, 211
SspI AATATT 1 cut(s) 220
SspMI CTAG 3 cut(s) 9, 131, 141
TaqI TCGA 1 cut(s) 234
TasI AATT 3 cut(s) 109, 198, 211
TseI GCWGC 1 cut(s) 134
TspDTI ATGAA 1 cut(s) 62
VneI GTGCAC 1 cut(s) 12
XapI RAATTY 1 cut(s) 198
XspI CTAG 3 cut(s) 9, 131, 141
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.