RLG00000006729

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0000778
Physical Location & Seq
Reverse (-)
9973755 .. 9974832
1078 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000006729

Sequence Viewer

Length: 894 bp
ATGACTCTATCTGCTCGCTTCTTCACCGGACTCCAAAACAACCAAGGCCGCACTGAAAAGTTTACCGAATTGATGAATATCATAACTTCAGGGCTGCACACTGTTCCTTTGAGTGTTCCAGGAACCACCTTCTACCGCGCAATAAAAGCCGCAGATGCTATGAGAAAGGAGGTTCTTTTGTTGATCAAGGAGAAGAAAGCAGCAATGTCTAGTGGAGCCCAAATGCACGATATCATGTCTTTCATGTTGTTCAACGCAGATCCAACCGGTCGTTGCGTACCGGAGAATGAAGTTGCTGACAAAATTATGGGTTCGATGGCCGGTGGATTCCACTCGCCTTCCATGGCTACAAGTTTTCTAATCAAGTATCTTGGAGAGAACCCTGAAATATGTGACAAAGTCCGAACAGAACAATTAGAGATTACACGCTCAAAACAATCCGGTGAAGCACTTAATTGGGATGATATCCAGAAGATGAAATATTCTTGGGGTGTTGCACTTGAAGTTATGAGGCTGGTGCCACCTCTTCAAGGAACATTTAGAGAGGTCATTACCGACTTCGCCTACGAAGGTTATACAATTCCAAAAGGGTGGAAGGTGTATTGGTCGGCTAGCAGCACAAACAAAGTCTCCGAGTATTTTCCAGCACCAGAAAAGTTCGATCCAACCAGGTTCGAGAATGGAAAAGCTCCCCCTGCTTACTCGAACATCCCATTTGGAAGCGGACCTCGAATTTGTCCAGGAAAAGACTATGCTCGTATGCAACTCCTGTGTTCGCTTCATCACATTGTGACCAAATACAAATGGGAAGTGATAAATCCAAACGCTAAGATCGCAAGTGGTATGAATCCCGTTCCCGAAGAAGGCATTCACATTCGCCTCCAACCTTATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

298

Amino Acids

33.32

Weight (kDa)

8.73

Isoelectric Point (pI)

43.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 22 - 275 2.3e-46 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 517
AccII CGCG 1 cut(s) 138
AciI CCGC 4 cut(s) 49, 136, 150, 723
AclWI GGATC 2 cut(s) 254, 656
AcoI YGGCCR 1 cut(s) 318
AcsI RAATTY 1 cut(s) 732
AcuI CTGAAG 1 cut(s) 72
AdeI CACNNNGTG 1 cut(s) 790
AfaI GTAC 1 cut(s) 279
AfiI CCNNNNNNNGG 2 cut(s) 530, 863
AgeI ACCGGT 1 cut(s) 266
AgsI TTSAA 3 cut(s) 253, 503, 530
AjnI CCWGG 3 cut(s) 118, 668, 739
AluBI AGCT 1 cut(s) 689
AluI AGCT 1 cut(s) 689
Alw26I GTCTC 1 cut(s) 634
AlwI GGATC 2 cut(s) 254, 656
AoxI GGCC 2 cut(s) 46, 318
ApeKI GCWGC 3 cut(s) 94, 200, 615
ApoI RAATTY 1 cut(s) 732
ArsI GACNNNNNNTTYG 2 cut(s) 717, 749
AsiGI ACCGGT 1 cut(s) 266
Asp700I GAANNNNTTC 1 cut(s) 867
AspLEI GCGC 1 cut(s) 140
AspS9I GGNCC 1 cut(s) 725
AsuHPI GGTGA 2 cut(s) 16, 455
AsuNHI GCTAGC 1 cut(s) 611
AvaII GGWCC 1 cut(s) 725
BanI GGYRCC 1 cut(s) 517
BanII GRGCYC 1 cut(s) 220
BbvI GCAGC 3 cut(s) 81, 212, 627
BccI CCATC 1 cut(s) 310
BciT130I CCWGG 3 cut(s) 120, 670, 741
BclI TGATCA 1 cut(s) 183
BcoDI GTCTC 1 cut(s) 634
BfaI CTAG 2 cut(s) 210, 612
BisI GCNGC 5 cut(s) 49, 95, 150, 201, 616
BlsI GCNGC 5 cut(s) 50, 96, 151, 202, 617
Bme1390I CCNGG 3 cut(s) 120, 670, 741
Bme18I GGWCC 1 cut(s) 725
BmgT120I GGNCC 1 cut(s) 725
BmiI GGNNCC 3 cut(s) 124, 217, 519
BmrFI CCNGG 3 cut(s) 120, 670, 741
BmsI GCATC 1 cut(s) 145
BmtI GCTAGC 1 cut(s) 615
BsaBI GATNNNNATC 1 cut(s) 77
BsaJI CCNNGG 2 cut(s) 43, 342
BsaWI WCCGGW 4 cut(s) 26, 266, 280, 440
BsaXI ACNNNNNCTCC 2 cut(s) 614, 644
Bsc4I CCNNNNNNNGG 2 cut(s) 530, 863
Bse118I RCCGGY 2 cut(s) 266, 320
Bse3DI GCAATG 1 cut(s) 210
Bse8I GATNNNNATC 1 cut(s) 77
BseBI CCWGG 3 cut(s) 120, 670, 741
BseDI CCNNGG 2 cut(s) 43, 342
BseGI GGATG 2 cut(s) 466, 708
BseJI GATNNNNATC 1 cut(s) 77
BseLI CCNNNNNNNGG 2 cut(s) 530, 863
BseMI GCAATG 1 cut(s) 210
BseXI GCAGC 3 cut(s) 81, 212, 627
BsgI GTGCAG 1 cut(s) 80
Bsh1236I CGCG 1 cut(s) 138
Bsh1285I CGRYCG 1 cut(s) 271
BshFI GGCC 2 cut(s) 48, 320
BshNI GGYRCC 1 cut(s) 517
BshTI ACCGGT 1 cut(s) 266
BsiEI CGRYCG 1 cut(s) 271
BsiSI CCGG 5 cut(s) 27, 267, 281, 321, 441
BslI CCNNNNNNNGG 2 cut(s) 530, 863
BsmAI GTCTC 1 cut(s) 634
BsmI GAATGC 1 cut(s) 867
BsnI GGCC 2 cut(s) 48, 320
Bsp1286I GDGCHC 1 cut(s) 220
Bsp143I GATC 4 cut(s) 183, 259, 661, 831
Bsp19I CCATGG 1 cut(s) 342
BspACI CCGC 4 cut(s) 49, 136, 150, 723
BspANI GGCC 2 cut(s) 48, 320
BspFNI CGCG 1 cut(s) 138
BspLI GGNNCC 3 cut(s) 124, 217, 519
BspOI GCTAGC 1 cut(s) 615
BspPI GGATC 2 cut(s) 254, 656
BspT107I GGYRCC 1 cut(s) 517
BsrDI GCAATG 1 cut(s) 210
BsrFI RCCGGY 2 cut(s) 266, 320
BssAI RCCGGY 2 cut(s) 266, 320
BssECI CCNNGG 2 cut(s) 43, 342
BssMI GATC 4 cut(s) 183, 259, 661, 831
BssT1I CCWWGG 2 cut(s) 43, 342
Bst2UI CCWGG 3 cut(s) 120, 670, 741
Bst4CI ACNGT 1 cut(s) 103
Bst6I CTCTTC 1 cut(s) 531
BstC8I GCNNGC 2 cut(s) 16, 613
BstDEI CTNAG 1 cut(s) 828
BstDSI CCRYGG 1 cut(s) 342
BstENI CCTNNNNNAGG 1 cut(s) 528
BstF5I GGATG 2 cut(s) 466, 708
BstFNI CGCG 1 cut(s) 138
BstHHI GCGC 1 cut(s) 140
BstKTI GATC 4 cut(s) 186, 262, 664, 834
BstMAI GTCTC 1 cut(s) 634
BstMBI GATC 4 cut(s) 183, 259, 661, 831
BstMCI CGRYCG 1 cut(s) 271
BstMWI GCNNNNNNNGC 4 cut(s) 146, 155, 695, 833
BstNI CCWGG 3 cut(s) 120, 670, 741
BstSCI CCNGG 3 cut(s) 118, 668, 739
BstUI CGCG 1 cut(s) 138
BstV1I GCAGC 3 cut(s) 81, 212, 627
BstX2I RGATCY 1 cut(s) 259
BstXI CCANNNNNNTGG 1 cut(s) 591
BstYI RGATCY 1 cut(s) 259
BsuRI GGCC 2 cut(s) 48, 320
BtgI CCRYGG 1 cut(s) 342
BtsCI GGATG 2 cut(s) 466, 708
BtsIMutI CAGTG 2 cut(s) 51, 99
Cac8I GCNNGC 2 cut(s) 16, 613
CfoI GCGC 1 cut(s) 140
Cfr10I RCCGGY 2 cut(s) 266, 320
Cfr13I GGNCC 1 cut(s) 725
CsiI ACCWGGT 1 cut(s) 668
Csp6I GTAC 1 cut(s) 278
CspAI ACCGGT 1 cut(s) 266
CviAII CATG 3 cut(s) 235, 244, 343
CviJI RGCY 9 cut(s) 48, 94, 149, 218, 320, 347, 514, 611, 689
CviKI_1 RGCY 9 cut(s) 48, 94, 149, 218, 320, 347, 514, 611, 689
CviQI GTAC 1 cut(s) 278
DdeI CTNAG 1 cut(s) 828
DpnI GATC 4 cut(s) 185, 261, 663, 833
DpnII GATC 4 cut(s) 183, 259, 661, 831
DraIII CACNNNGTG 1 cut(s) 790
EaeI YGGCCR 1 cut(s) 318
Eam1104I CTCTTC 1 cut(s) 531
EarI CTCTTC 1 cut(s) 531
Eco130I CCWWGG 2 cut(s) 43, 342
Eco24I GRGCYC 1 cut(s) 220
Eco32I GATATC 2 cut(s) 232, 466
Eco47I GGWCC 1 cut(s) 725
Eco57I CTGAAG 1 cut(s) 72
EcoNI CCTNNNNNAGG 1 cut(s) 528
EcoRII CCWGG 3 cut(s) 118, 668, 739
EcoRV GATATC 2 cut(s) 232, 466
EcoT14I CCWWGG 2 cut(s) 43, 342
EcoT38I GRGCYC 1 cut(s) 220
ErhI CCWWGG 2 cut(s) 43, 342
FaeI CATG 3 cut(s) 238, 247, 346
FatI CATG 3 cut(s) 234, 243, 342
FbaI TGATCA 1 cut(s) 183
Fnu4HI GCNGC 5 cut(s) 49, 95, 150, 201, 616
FokI GGATG 2 cut(s) 473, 695
FriOI GRGCYC 1 cut(s) 220
Fsp4HI GCNGC 5 cut(s) 49, 95, 150, 201, 616
FspBI CTAG 2 cut(s) 210, 612
GlaI GCGC 1 cut(s) 139
GluI GCNGC 5 cut(s) 49, 95, 150, 201, 616
HaeIII GGCC 2 cut(s) 48, 320
HapII CCGG 5 cut(s) 27, 267, 281, 321, 441
HhaI GCGC 1 cut(s) 140
Hin1II CATG 3 cut(s) 238, 247, 346
Hin6I GCGC 1 cut(s) 138
HinP1I GCGC 1 cut(s) 138
HinfI GANTC 4 cut(s) 4, 30, 327, 847
HpaII CCGG 5 cut(s) 27, 267, 281, 321, 441
HphI GGTGA 2 cut(s) 16, 455
Hpy166II GTNNAC 1 cut(s) 63
Hpy188I TCNGA 2 cut(s) 404, 634
Hpy188III TCNNGA 3 cut(s) 469, 676, 857
Hpy8I GTNNAC 1 cut(s) 63
HpyAV CCTTC 5 cut(s) 139, 348, 563, 589, 857
HpyCH4III ACNGT 1 cut(s) 103
HpyCH4V TGCA 4 cut(s) 97, 226, 497, 763
HpyF10VI GCNNNNNNNGC 4 cut(s) 146, 155, 695, 833
HpyF3I CTNAG 1 cut(s) 828
Hsp92II CATG 3 cut(s) 238, 247, 346
HspAI GCGC 1 cut(s) 138
Ksp22I TGATCA 1 cut(s) 183
Kzo9I GATC 4 cut(s) 183, 259, 661, 831
LmnI GCTCC 2 cut(s) 215, 694
Lsp1109I GCAGC 3 cut(s) 81, 212, 627
LweI GCATC 1 cut(s) 145
MabI ACCWGGT 1 cut(s) 668
MaeI CTAG 2 cut(s) 210, 612
MaeIII GTNAC 2 cut(s) 392, 790
MalI GATC 4 cut(s) 185, 261, 663, 833
MboI GATC 4 cut(s) 183, 259, 661, 831
MboII GAAGA 5 cut(s) 13, 205, 484, 518, 872
MflI RGATCY 1 cut(s) 259
MhlI GDGCHC 1 cut(s) 220
MluCI AATT 6 cut(s) 68, 303, 413, 454, 579, 732
MlyI GAGTC 1 cut(s) 24
MmeI TCCRAC 2 cut(s) 287, 689
MnlI CCTC 6 cut(s) 163, 504, 534, 538, 738, 890
MroXI GAANNNNTTC 1 cut(s) 867
MseI TTAA 1 cut(s) 453
MspI CCGG 5 cut(s) 27, 267, 281, 321, 441
MspR9I CCNGG 3 cut(s) 120, 670, 741
Mva1269I GAATGC 1 cut(s) 867
MvaI CCWGG 3 cut(s) 120, 670, 741
MvnI CGCG 1 cut(s) 138
MwoI GCNNNNNNNGC 4 cut(s) 146, 155, 695, 833
NcoI CCATGG 1 cut(s) 342
NdeII GATC 4 cut(s) 183, 259, 661, 831
NheI GCTAGC 1 cut(s) 611
NlaIII CATG 3 cut(s) 238, 247, 346
NlaIV GGNNCC 3 cut(s) 124, 217, 519
NmuCI GTSAC 2 cut(s) 392, 790
PctI GAATGC 1 cut(s) 867
PdmI GAANNNNTTC 1 cut(s) 867
PfeI GAWTC 2 cut(s) 327, 847
PflFI GACNNNGTC 1 cut(s) 398
PfoI TCCNGGA 2 cut(s) 118, 739
PinAI ACCGGT 1 cut(s) 266
PkrI GCNGC 5 cut(s) 50, 96, 151, 202, 617
PleI GAGTC 1 cut(s) 24
PpsI GAGTC 1 cut(s) 24
Psp6I CCWGG 3 cut(s) 118, 668, 739
PspGI CCWGG 3 cut(s) 118, 668, 739
PspN4I GGNNCC 3 cut(s) 124, 217, 519
PspPI GGNCC 1 cut(s) 725
PsuI RGATCY 1 cut(s) 259
PsyI GACNNNGTC 1 cut(s) 398
RsaI GTAC 1 cut(s) 279
RsaNI GTAC 1 cut(s) 278
SaqAI TTAA 1 cut(s) 453
SatI GCNGC 5 cut(s) 49, 95, 150, 201, 616
Sau3AI GATC 4 cut(s) 183, 259, 661, 831
Sau96I GGNCC 1 cut(s) 725
SchI GAGTC 1 cut(s) 24
ScrFI CCNGG 3 cut(s) 120, 670, 741
SduI GDGCHC 1 cut(s) 220
SexAI ACCWGGT 1 cut(s) 668
SfaNI GCATC 1 cut(s) 145
SinI GGWCC 1 cut(s) 725
Sse9I AATT 6 cut(s) 68, 303, 413, 454, 579, 732
SsiI CCGC 4 cut(s) 49, 136, 150, 723
SspI AATATT 1 cut(s) 482
SspMI CTAG 2 cut(s) 210, 612
StyD4I CCNGG 3 cut(s) 118, 668, 739
StyI CCWWGG 2 cut(s) 43, 342
TaaI ACNGT 1 cut(s) 103
TaqI TCGA 5 cut(s) 314, 660, 675, 704, 730
TasI AATT 6 cut(s) 68, 303, 413, 454, 579, 732
TauI GCSGC 2 cut(s) 51, 152
TfiI GAWTC 2 cut(s) 327, 847
Tru1I TTAA 1 cut(s) 453
Tru9I TTAA 1 cut(s) 453
TscAI CASTG 2 cut(s) 58, 106
TseFI GTSAC 2 cut(s) 392, 790
TseI GCWGC 3 cut(s) 94, 200, 615
Tsp45I GTSAC 2 cut(s) 392, 790
TspDTI ATGAA 6 cut(s) 89, 232, 303, 491, 770, 860
TspRI CASTG 2 cut(s) 58, 106
Tth111I GACNNNGTC 1 cut(s) 398
VpaK11BI GGWCC 1 cut(s) 725
XagI CCTNNNNNAGG 1 cut(s) 528
XapI RAATTY 1 cut(s) 732
XmnI GAANNNNTTC 1 cut(s) 867
XspI CTAG 2 cut(s) 210, 612
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.