Prupe.1G461800_v2.0.a1

Fasciclin-like arabinogalactan protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0001500
Physical Location & Seq
Reverse (-)
38615177 .. 38616323
1147 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G461800.1

Sequence Viewer

Length: 807 bp
ATGGAGAACAAAGCCTCTACCATCCTCTGCCTTGCCCTCCTCTTCATTGTCTTCTCCTCTTCGGCCTCGGCCTTCGACATCACAAAGCTACTGGAGAAGCAGTCGGAGTTCAGCAACTTCAACACCTACCTCAAGGAGACCAAACTTGGCGAACAGATTAACAGCCGCAGCACCATCACCGTCTTGGCCGTCGGCAACGGCGCCATCTCCAGCCTCGCTGGCAAATCCCAAGACGTGGTCAAGAAGATCCTGAGCGCCCACGTGATCCTGGACTATTATGATGAGCAGAAGCTGACCAAGCTGGCCAAGTCCAGCAAGGCCACCACCCTCACCACCATGTTCCAGTCCTCCGGCCAAGCTCAGAACCAGCAGGGCTTTATCAACGCCGGCATTGTCAACGAAGGCGAGCTCGCTTTCGGGTCCGCCGCCAAAGGCAGCAAGCTCAACGCCAAGCTTGTTAAATCCGTTGTTTCTCAGCCGTTCAATATTTCTGTTCTTCAAGTCTCTGAGCTGATTGACATCCCTGACATTGCTGCCTCAAGCCCTGCTGGCTCTCCCAAGTCATCTCCTTCCCCATCCAAGGCTCCTTCTTCATCGTCCGATGACGAGGCCCCAAGCGCCTCGCCCAAGTCGTCCAAGTCCAAGGCACCTACATCGTCCGATGAGACGACATCGTCGTCACCACCAGTGCCTGACGAGGCAGGATCAAGCACTGCCCCTGCCCCTGCCCCATCTGCTGCTTCTCGCGTTGATATGGCCGTTGGTGCCGGTGTGATGATCGGCTTGGCCTCACTTTTGGTTGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Fasciclin

Protein Analysis

269

Amino Acids

27.49

Weight (kDa)

6.61

Isoelectric Point (pI)

56.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 673, 676
AccB1I GGYRCC 3 cut(s) 200, 646, 764
AccB7I CCANNNNNTGG 1 cut(s) 235
AccII CGCG 1 cut(s) 747
AciI CCGC 3 cut(s) 166, 423, 426
AclWI GGATC 3 cut(s) 241, 259, 712
AcoI YGGCCR 4 cut(s) 186, 303, 352, 756
AcvI CACGTG 1 cut(s) 262
AcyI GRCGYC 1 cut(s) 201
AfiI CCNNNNNNNGG 2 cut(s) 235, 580
AgsI TTSAA 3 cut(s) 121, 484, 500
AjiI CACGTC 1 cut(s) 235
AjnI CCWGG 1 cut(s) 267
AluBI AGCT 8 cut(s) 88, 292, 301, 359, 409, 442, 454, 511
AluI AGCT 8 cut(s) 88, 292, 301, 359, 409, 442, 454, 511
Alw21I GWGCWC 1 cut(s) 411
Alw26I GTCTC 3 cut(s) 131, 508, 659
AlwI GGATC 3 cut(s) 241, 259, 712
AlwNI CAGNNNCTG 2 cut(s) 292, 692
AoxI GGCC 9 cut(s) 63, 69, 186, 303, 318, 352, 609, 756, 786
ApeKI GCWGC 4 cut(s) 168, 435, 533, 737
AspLEI GCGC 3 cut(s) 203, 257, 620
AspS9I GGNCC 2 cut(s) 420, 610
AsuHPI GGTGA 3 cut(s) 169, 322, 672
AvaII GGWCC 1 cut(s) 420
BalI TGGCCA 1 cut(s) 305
BanI GGYRCC 3 cut(s) 200, 646, 764
BanII GRGCYC 1 cut(s) 411
BbrPI CACGTG 1 cut(s) 262
BbsI GAAGAC 1 cut(s) 43
Bbv12I GWGCWC 1 cut(s) 411
BbvI GCAGC 4 cut(s) 180, 447, 520, 724
BccI CCATC 5 cut(s) 29, 182, 212, 583, 739
BceAI ACGGC 4 cut(s) 173, 214, 463, 743
BcgI CGANNNNNNTGC 2 cut(s) 636, 670
BciT130I CCWGG 1 cut(s) 269
BcoDI GTCTC 3 cut(s) 131, 508, 659
BfoI RGCGCY 3 cut(s) 204, 258, 621
BglI GCCNNNNNGGC 2 cut(s) 219, 549
BisI GCNGC 6 cut(s) 166, 169, 426, 436, 534, 738
BlsI GCNGC 6 cut(s) 167, 170, 427, 437, 535, 739
Bme1390I CCNGG 1 cut(s) 269
Bme18I GGWCC 1 cut(s) 420
BmgBI CACGTC 1 cut(s) 235
BmgT120I GGNCC 2 cut(s) 420, 610
BmiI GGNNCC 6 cut(s) 202, 421, 585, 612, 648, 766
BmrFI CCNGG 1 cut(s) 269
BpiI GAAGAC 1 cut(s) 43
BpmI CTGGAG 2 cut(s) 113, 193
Bpu10I CCTNAGC 1 cut(s) 251
BpuEI CTTGAG 2 cut(s) 116, 523
BsaAI YACGTR 1 cut(s) 262
BsaBI GATNNNNATC 1 cut(s) 518
BsaHI GRCGYC 1 cut(s) 201
BsaI GGTCTC 1 cut(s) 131
BsaJI CCNNGG 3 cut(s) 66, 579, 642
BsaXI ACNNNNNCTCC 2 cut(s) 86, 116
Bsc4I CCNNNNNNNGG 2 cut(s) 235, 580
Bse118I RCCGGY 2 cut(s) 386, 767
Bse1I ACTGG 3 cut(s) 96, 343, 686
Bse3DI GCAATG 1 cut(s) 528
Bse8I GATNNNNATC 1 cut(s) 518
BseBI CCWGG 1 cut(s) 269
BseDI CCNNGG 3 cut(s) 66, 579, 642
BseGI GGATG 3 cut(s) 21, 519, 575
BseJI GATNNNNATC 1 cut(s) 518
BseLI CCNNNNNNNGG 2 cut(s) 235, 580
BseMI GCAATG 1 cut(s) 528
BseMII CTCAG 4 cut(s) 242, 374, 488, 498
BseNI ACTGG 3 cut(s) 96, 343, 686
BseRI GAGGAG 2 cut(s) 29, 46
BseXI GCAGC 4 cut(s) 180, 447, 520, 724
Bsh1236I CGCG 1 cut(s) 747
BshFI GGCC 9 cut(s) 65, 71, 188, 305, 320, 354, 611, 758, 788
BshNI GGYRCC 3 cut(s) 200, 646, 764
BsiHKAI GWGCWC 1 cut(s) 411
BsiSI CCGG 3 cut(s) 351, 387, 768
BslI CCNNNNNNNGG 2 cut(s) 235, 580
BsmAI GTCTC 3 cut(s) 131, 508, 659
BsmBI CGTCTC 1 cut(s) 659
BsnI GGCC 9 cut(s) 65, 71, 188, 305, 320, 354, 611, 758, 788
Bso31I GGTCTC 1 cut(s) 131
Bsp1286I GDGCHC 1 cut(s) 411
Bsp143I GATC 4 cut(s) 246, 264, 704, 777
BspACI CCGC 3 cut(s) 166, 423, 426
BspANI GGCC 9 cut(s) 65, 71, 188, 305, 320, 354, 611, 758, 788
BspCNI CTCAG 4 cut(s) 243, 373, 487, 499
BspFNI CGCG 1 cut(s) 747
BspLI GGNNCC 6 cut(s) 202, 421, 585, 612, 648, 766
BspPI GGATC 3 cut(s) 241, 259, 712
BspT107I GGYRCC 3 cut(s) 200, 646, 764
BspTNI GGTCTC 1 cut(s) 131
BsrDI GCAATG 1 cut(s) 528
BsrFI RCCGGY 2 cut(s) 386, 767
BsrI ACTGG 3 cut(s) 96, 343, 686
BssAI RCCGGY 2 cut(s) 386, 767
BssECI CCNNGG 3 cut(s) 66, 579, 642
BssMI GATC 4 cut(s) 246, 264, 704, 777
BssNI GRCGYC 1 cut(s) 201
BssT1I CCWWGG 2 cut(s) 579, 642
Bst2UI CCWGG 1 cut(s) 269
Bst4CI ACNGT 1 cut(s) 181
Bst6I CTCTTC 2 cut(s) 47, 64
BstACI GRCGYC 1 cut(s) 201
BstBAI YACGTR 1 cut(s) 262
BstC8I GCNNGC 7 cut(s) 220, 303, 388, 407, 411, 440, 550
BstDEI CTNAG 4 cut(s) 251, 360, 474, 507
BstF5I GGATG 3 cut(s) 21, 519, 575
BstFNI CGCG 1 cut(s) 747
BstH2I RGCGCY 3 cut(s) 204, 258, 621
BstHHI GCGC 3 cut(s) 203, 257, 620
BstKTI GATC 4 cut(s) 249, 267, 707, 780
BstMAI GTCTC 3 cut(s) 131, 508, 659
BstMBI GATC 4 cut(s) 246, 264, 704, 777
BstMWI GCNNNNNNNGC 6 cut(s) 219, 298, 549, 617, 734, 764
BstNI CCWGG 1 cut(s) 269
BstSCI CCNGG 1 cut(s) 267
BstUI CGCG 1 cut(s) 747
BstV1I GCAGC 4 cut(s) 180, 447, 520, 724
BstV2I GAAGAC 1 cut(s) 43
BstX2I RGATCY 1 cut(s) 246
BstYI RGATCY 1 cut(s) 246
BsuRI GGCC 9 cut(s) 65, 71, 188, 305, 320, 354, 611, 758, 788
BtrI CACGTC 1 cut(s) 235
BtsCI GGATG 3 cut(s) 21, 519, 575
BtsI GCAGTG 1 cut(s) 711
BtsIMutI CAGTG 2 cut(s) 693, 711
Cac8I GCNNGC 7 cut(s) 220, 303, 388, 407, 411, 440, 550
CaiI CAGNNNCTG 2 cut(s) 292, 692
CfoI GCGC 3 cut(s) 203, 257, 620
Cfr10I RCCGGY 2 cut(s) 386, 767
Cfr13I GGNCC 2 cut(s) 420, 610
CviAII CATG 1 cut(s) 337
DdeI CTNAG 4 cut(s) 251, 360, 474, 507
DinI GGCGCC 1 cut(s) 202
DpnI GATC 4 cut(s) 248, 266, 706, 779
DpnII GATC 4 cut(s) 246, 264, 704, 777
DrdI GACNNNNNNGTC 2 cut(s) 673, 676
DseDI GACNNNNNNGTC 2 cut(s) 673, 676
EaeI YGGCCR 4 cut(s) 186, 303, 352, 756
Eam1104I CTCTTC 2 cut(s) 47, 64
EarI CTCTTC 2 cut(s) 47, 64
EciI GGCGGA 1 cut(s) 412
Ecl136II GAGCTC 1 cut(s) 409
Eco130I CCWWGG 2 cut(s) 579, 642
Eco24I GRGCYC 1 cut(s) 411
Eco31I GGTCTC 1 cut(s) 131
Eco47I GGWCC 1 cut(s) 420
Eco53kI GAGCTC 1 cut(s) 409
Eco72I CACGTG 1 cut(s) 262
EcoICRI GAGCTC 1 cut(s) 409
EcoO109I RGGNCCY 1 cut(s) 610
EcoRII CCWGG 1 cut(s) 267
EcoT14I CCWWGG 2 cut(s) 579, 642
EcoT38I GRGCYC 1 cut(s) 411
EgeI GGCGCC 1 cut(s) 202
EheI GGCGCC 1 cut(s) 202
ErhI CCWWGG 2 cut(s) 579, 642
Esp3I CGTCTC 1 cut(s) 659
FaeI CATG 1 cut(s) 340
FaiI YATR 3 cut(s) 279, 338, 755
FatI CATG 1 cut(s) 336
Fnu4HI GCNGC 6 cut(s) 166, 169, 426, 436, 534, 738
FokI GGATG 3 cut(s) 8, 506, 562
FriOI GRGCYC 1 cut(s) 411
Fsp4HI GCNGC 6 cut(s) 166, 169, 426, 436, 534, 738
GlaI GCGC 3 cut(s) 202, 256, 619
GluI GCNGC 6 cut(s) 166, 169, 426, 436, 534, 738
GsuI CTGGAG 2 cut(s) 113, 193
HaeII RGCGCY 3 cut(s) 204, 258, 621
HaeIII GGCC 9 cut(s) 65, 71, 188, 305, 320, 354, 611, 758, 788
HapII CCGG 3 cut(s) 351, 387, 768
HhaI GCGC 3 cut(s) 203, 257, 620
Hin1I GRCGYC 1 cut(s) 201
Hin1II CATG 1 cut(s) 340
Hin6I GCGC 3 cut(s) 201, 255, 618
HinP1I GCGC 3 cut(s) 201, 255, 618
HincII GTYRAC 1 cut(s) 397
HindII GTYRAC 1 cut(s) 397
HindIII AAGCTT 1 cut(s) 452
HpaII CCGG 3 cut(s) 351, 387, 768
HphI GGTGA 3 cut(s) 169, 322, 672
Hpy166II GTNNAC 1 cut(s) 397
Hpy188I TCNGA 5 cut(s) 106, 363, 508, 601, 661
Hpy188III TCNNGA 2 cut(s) 241, 250
Hpy8I GTNNAC 1 cut(s) 397
Hpy99I CGWCG 2 cut(s) 194, 679
HpyAV CCTTC 4 cut(s) 82, 395, 579, 597
HpyCH4III ACNGT 1 cut(s) 181
HpyCH4IV ACGT 2 cut(s) 234, 261
HpyF10VI GCNNNNNNNGC 6 cut(s) 219, 298, 549, 617, 734, 764
HpyF3I CTNAG 4 cut(s) 251, 360, 474, 507
HpySE526I ACGT 2 cut(s) 234, 261
Hsp92I GRCGYC 1 cut(s) 201
Hsp92II CATG 1 cut(s) 340
HspAI GCGC 3 cut(s) 201, 255, 618
KasI GGCGCC 1 cut(s) 200
KroI GCCGGC 1 cut(s) 386
KroNI GCCGGC 1 cut(s) 388
Kzo9I GATC 4 cut(s) 246, 264, 704, 777
LmnI GCTCC 1 cut(s) 589
Lsp1109I GCAGC 4 cut(s) 180, 447, 520, 724
MaeII ACGT 2 cut(s) 234, 261
MaeIII GTNAC 1 cut(s) 678
MalI GATC 4 cut(s) 248, 266, 706, 779
MboI GATC 4 cut(s) 246, 264, 704, 777
MboII GAAGA 6 cut(s) 34, 43, 51, 256, 488, 582
MflI RGATCY 1 cut(s) 246
MhlI GDGCHC 1 cut(s) 411
MlsI TGGCCA 1 cut(s) 305
MluNI TGGCCA 1 cut(s) 305
Mly113I GGCGCC 1 cut(s) 201
MmeI TCCRAC 1 cut(s) 84
Mox20I TGGCCA 1 cut(s) 305
MroNI GCCGGC 1 cut(s) 386
MscI TGGCCA 1 cut(s) 305
MseI TTAA 3 cut(s) 159, 459, 805
MslI CAYNNNNRTG 1 cut(s) 335
Msp20I TGGCCA 1 cut(s) 305
MspI CCGG 3 cut(s) 351, 387, 768
MspR9I CCNGG 1 cut(s) 269
MvaI CCWGG 1 cut(s) 269
MvnI CGCG 1 cut(s) 747
MwoI GCNNNNNNNGC 6 cut(s) 219, 298, 549, 617, 734, 764
NaeI GCCGGC 1 cut(s) 388
NarI GGCGCC 1 cut(s) 201
NdeII GATC 4 cut(s) 246, 264, 704, 777
NgoMIV GCCGGC 1 cut(s) 386
NlaIII CATG 1 cut(s) 340
NlaIV GGNNCC 6 cut(s) 202, 421, 585, 612, 648, 766
NmeAIII GCCGAG 1 cut(s) 47
NmuCI GTSAC 1 cut(s) 678
PcsI WCGNNNNNNNCGW 2 cut(s) 629, 674
PdiI GCCGGC 1 cut(s) 388
PflFI GACNNNGTC 2 cut(s) 236, 673
PflMI CCANNNNNTGG 1 cut(s) 235
PfoI TCCNGGA 1 cut(s) 267
PkrI GCNGC 6 cut(s) 167, 170, 427, 437, 535, 739
PluTI GGCGCC 1 cut(s) 204
PmaCI CACGTG 1 cut(s) 262
PmlI CACGTG 1 cut(s) 262
Ppu21I YACGTR 1 cut(s) 262
Psp124BI GAGCTC 1 cut(s) 411
Psp6I CCWGG 1 cut(s) 267
PspCI CACGTG 1 cut(s) 262
PspGI CCWGG 1 cut(s) 267
PspN4I GGNNCC 6 cut(s) 202, 421, 585, 612, 648, 766
PspPI GGNCC 2 cut(s) 420, 610
PstNI CAGNNNCTG 2 cut(s) 292, 692
PsuI RGATCY 1 cut(s) 246
PsyI GACNNNGTC 2 cut(s) 236, 673
RseI CAYNNNNRTG 1 cut(s) 335
SacI GAGCTC 1 cut(s) 411
SaqAI TTAA 3 cut(s) 159, 459, 805
SatI GCNGC 6 cut(s) 166, 169, 426, 436, 534, 738
Sau3AI GATC 4 cut(s) 246, 264, 704, 777
Sau96I GGNCC 2 cut(s) 420, 610
ScrFI CCNGG 1 cut(s) 269
SduI GDGCHC 1 cut(s) 411
SfoI GGCGCC 1 cut(s) 202
SinI GGWCC 1 cut(s) 420
SmiMI CAYNNNNRTG 1 cut(s) 335
SmlI CTYRAG 2 cut(s) 131, 538
SmoI CTYRAG 2 cut(s) 131, 538
SsiI CCGC 3 cut(s) 166, 423, 426
SspDI GGCGCC 1 cut(s) 200
SspI AATATT 1 cut(s) 487
SstI GAGCTC 1 cut(s) 411
StyD4I CCNGG 1 cut(s) 267
StyI CCWWGG 2 cut(s) 579, 642
TaaI ACNGT 1 cut(s) 181
TaiI ACGT 2 cut(s) 237, 264
TaqI TCGA 1 cut(s) 75
TauI GCSGC 2 cut(s) 168, 428
Tru1I TTAA 3 cut(s) 159, 459, 805
Tru9I TTAA 3 cut(s) 159, 459, 805
TscAI CASTG 2 cut(s) 693, 718
TseFI GTSAC 1 cut(s) 678
TseI GCWGC 4 cut(s) 168, 435, 533, 737
Tsp45I GTSAC 1 cut(s) 678
TspDTI ATGAA 2 cut(s) 34, 582
TspGWI ACGGA 1 cut(s) 454
TspRI CASTG 2 cut(s) 693, 718
Tth111I GACNNNGTC 2 cut(s) 236, 673
Van91I CCANNNNNTGG 1 cut(s) 235
VpaK11BI GGWCC 1 cut(s) 420
XcmI CCANNNNNNNNNTGG 1 cut(s) 181
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.