Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0002361

Physical Location & Seq

Genomic Coordinates Reverse (-)

23917016 .. 23919967

Gene Structure 2952 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G203400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1047 bp

ATGGGGGGCAATGATAAGAGGAAGCGAAGCGAAAGTGAAGGAGGAGATGAACAACCGATAGAGAAGAAGAGGGAGATTCTGCCGTCGATGATAAAGAACAAGGAGAAGAGGTCGGCGATCCACGCCAAGCTCAAGCAGCAGAAGAAACTCGAGAAGCGCAAGAAGGCCAAAGCTCGCGACGCCGCCGAGAAGCGCGCTCTCGAGCTCGGCGAGGAGCTTCCGGCGAAGAAGATCCCTAAGACGATTGAGAACACCAGGGAATTCGATGAGACTGTTTGTAAGCCCGACGACGAAGAGCTGTTTGCTGGAAATGATGCCGATGAATTTAGTTCGATTTTAAAGCGCGAAAGGACTCCAAAAATATTAATCACTACTTGCCGTTTCCATTCTTCTAGGGGGCCTGATTTAATAAAGGAACTACTTTCAGTGATCCCAAATGCACACTACTATAAAAGAGGAACTTATGACTTGAAAAAGATTGTAGAATTTGCAAATAAGAAAGACTTCACATCCATAATTGTTGTTCACACCAATCGCAGGGAACCAGATGCTTTCGTAATAATTGGCTTACCTACTGGACCTACTGCCCATTTCAAGCTCTCAAATCTTGTTTTACGCAAGGATATCAAGAATCATGGAAATCCAACCAGTCATGAGCCCGAGCTTGTATTAAACAATTTTACAACACGCCTTGGTCATCGTATTGGAAGATCAATACAGTCACTTTTCCCACAAGAACCAAACTTTCCTGGTCGGCGAGTTGTAACTTTCCACAACCAGCGAGATTTTATATTCTTCCGGCATCATCGGTATATTTTTGAAGCCAAAGAGACTAAACAGACCGAGTCAAAAGGTAAAAAGACCAAGGATGCCAAGGGTGAGAGTGAACCTCAAGGGAAAGTGATTGCCCGTCTTCAGGAGTGTGGCCCTCGTTTCACCCTTAAACTACTCAGTCTGCAGCATGGGACCTTTGATACTAAAGGCGGGGAATATGAGTGGGTTCACAAGCCGGAAATGGACACTAGCAGGAGGAGGTTTTTTTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Brix

Protein Analysis

349

Amino Acids

40.24

Weight (kDa)

9.76

Isoelectric Point (pI)

49.78

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002361)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G01560
fragaria_vesca	FvH4_7g18100 FvH4_7g18130
malus_domestica	MD01G1095300.v1.1 MD07G1164400.v1.1
prunus_persica	Prupe.2G203400_v2.0.a1
pyrus_communis	pycom01g11760 pycom07g15940
rosa_chinensis	RchiOBHm_Chr1g0321231 RchiOBHm_Chr1g0346391 RchiOBHm_Chr1g0361751 RchiOBHm_Chr2g0110161 RchiOBHm_Chr3g0479951 RchiOBHm_Chr3g0493911 RchiOBHm_Chr4g0406331 RchiOBHm_Chr5g0043791 RchiOBHm_Chr5g0052991 RchiOBHm_Chr5g0055421 RchiOBHm_Chr6g0259761 RchiOBHm_Chr7g0204491 RchiOBHm_Chr7g0219071 RchiOBHm_Chr7g0228521
rosa_laevigata	RLG00000027705
rosa_multiflora	Rmu_sc0005733.1_g000001
rosa_roxburghii	Rroxscaffold_4G00294720
rosa_rugosa	Rorug01G0291200
rosa_samantha	Rh1AG105100 Rh1AG301600 Rh1BG264500 Rh1CG282900 Rh1DG144800 Rh1DG294500 Rh5BG300200 Rh5BG351900 Rh5DG309100 Rh5DG368200 Rh6AG038900 Rh6AG080500 Rh6CG040900
rosa_wichuraiana	Rw1G026720 Rw5G034050 Rw6G003520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	3 cut(s)	177, 195, 345
AciI	CCGC	2 cut(s)	183, 984
AclWI	GGATC	3 cut(s)	112, 226, 424
AcsI	RAATTY	3 cut(s)	260, 323, 485
AcuI	CTGAAG	1 cut(s)	899
AcyI	GRCGYC	1 cut(s)	180
AfiI	CCNNNNNNNGG	2 cut(s)	537, 916
AgsI	TTSAA	3 cut(s)	472, 595, 821
AjnI	CCWGG	2 cut(s)	254, 748
AluBI	AGCT	7 cut(s)	130, 173, 205, 217, 298, 598, 664
AluI	AGCT	7 cut(s)	130, 173, 205, 217, 298, 598, 664
Alw21I	GWGCWC	1 cut(s)	207
Alw26I	GTCTC	2 cut(s)	263, 824
AlwI	GGATC	3 cut(s)	112, 226, 424
Ama87I	CYCGRG	3 cut(s)	149, 200, 659
AoxI	GGCC	3 cut(s)	165, 398, 925
ApeKI	GCWGC	2 cut(s)	136, 958
ApoI	RAATTY	3 cut(s)	260, 323, 485
AseI	ATTAAT	1 cut(s)	365
Asp700I	GAANNNNTTC	1 cut(s)	503
AspLEI	GCGC	4 cut(s)	159, 195, 197, 345
AspS9I	GGNCC	4 cut(s)	398, 578, 926, 966
AsuHPI	GGTGA	2 cut(s)	890, 928
AvaI	CYCGRG	3 cut(s)	149, 200, 659
AvaII	GGWCC	2 cut(s)	578, 966
BanII	GRGCYC	2 cut(s)	207, 660
BbsI	GAAGAC	1 cut(s)	905
Bbv12I	GWGCWC	1 cut(s)	207
BbvI	GCAGC	2 cut(s)	148, 970
BceAI	ACGGC	2 cut(s)	67, 363
BciT130I	CCWGG	2 cut(s)	256, 750
BcoDI	GTCTC	2 cut(s)	263, 824
BfaI	CTAG	2 cut(s)	393, 1023
BfmI	CTRYAG	1 cut(s)	956
BisI	GCNGC	3 cut(s)	137, 183, 959
BlsI	GCNGC	3 cut(s)	138, 184, 960
Bme1390I	CCNGG	2 cut(s)	256, 750
Bme18I	GGWCC	2 cut(s)	578, 966
BmeT110I	CYCGRG	3 cut(s)	149, 200, 659
BmgT120I	GGNCC	4 cut(s)	398, 578, 926, 966
BmiI	GGNNCC	3 cut(s)	399, 543, 967
BmrFI	CCNGG	2 cut(s)	256, 750
BmsI	GCATC	4 cut(s)	304, 538, 811, 859
BpiI	GAAGAC	1 cut(s)	905
BplI	GAGNNNNNCTC	2 cut(s)	874, 906
BpuEI	CTTGAG	2 cut(s)	116, 876
BsaHI	GRCGYC	1 cut(s)	180
BsaJI	CCNNGG	4 cut(s)	255, 691, 864, 873
BsaXI	ACNNNNNCTCC	2 cut(s)	95, 125
Bsc4I	CCNNNNNNNGG	2 cut(s)	537, 916
Bse1I	ACTGG	2 cut(s)	580, 648
Bse3DI	GCAATG	1 cut(s)	16
BseBI	CCWGG	2 cut(s)	256, 750
BseDI	CCNNGG	4 cut(s)	255, 691, 864, 873
BseGI	GGATG	2 cut(s)	509, 874
BseLI	CCNNNNNNNGG	2 cut(s)	537, 916
BseMI	GCAATG	1 cut(s)	16
BseMII	CTCAG	1 cut(s)	964
BseNI	ACTGG	2 cut(s)	580, 648
BsePI	GCGCGC	1 cut(s)	193
BseRI	GAGGAG	3 cut(s)	57, 227, 1045
BseXI	GCAGC	2 cut(s)	148, 970
Bsh1236I	CGCG	3 cut(s)	177, 195, 345
BshFI	GGCC	3 cut(s)	167, 400, 927
BsiHKAI	GWGCWC	1 cut(s)	207
BsiHKCI	CYCGRG	3 cut(s)	149, 200, 659
BsiSI	CCGG	3 cut(s)	221, 799, 1010
BslFI	GGGAC	1 cut(s)	979
BslI	CCNNNNNNNGG	2 cut(s)	537, 916
BsmAI	GTCTC	2 cut(s)	263, 824
BsmFI	GGGAC	1 cut(s)	979
BsnI	GGCC	3 cut(s)	167, 400, 927
BsoBI	CYCGRG	3 cut(s)	149, 200, 659
Bsp1286I	GDGCHC	2 cut(s)	207, 660
Bsp143I	GATC	4 cut(s)	117, 231, 429, 710
Bsp68I	TCGCGA	1 cut(s)	177
BspACI	CCGC	2 cut(s)	183, 984
BspANI	GGCC	3 cut(s)	167, 400, 927
BspCNI	CTCAG	1 cut(s)	963
BspFNI	CGCG	3 cut(s)	177, 195, 345
BspHI	TCATGA	1 cut(s)	652
BspLI	GGNNCC	3 cut(s)	399, 543, 967
BspMAI	CTGCAG	1 cut(s)	960
BspPI	GGATC	3 cut(s)	112, 226, 424
BspQI	GCTCTTC	1 cut(s)	288
BsrDI	GCAATG	1 cut(s)	16
BsrI	ACTGG	2 cut(s)	580, 648
BssECI	CCNNGG	4 cut(s)	255, 691, 864, 873
BssHII	GCGCGC	1 cut(s)	193
BssMI	GATC	4 cut(s)	117, 231, 429, 710
BssNI	GRCGYC	1 cut(s)	180
BssT1I	CCWWGG	3 cut(s)	691, 864, 873
Bst2UI	CCWGG	2 cut(s)	256, 750
Bst4CI	ACNGT	2 cut(s)	274, 720
Bst6I	CTCTTC	3 cut(s)	62, 101, 288
BstACI	GRCGYC	1 cut(s)	180
BstC8I	GCNNGC	2 cut(s)	175, 195
BstDEI	CTNAG	2 cut(s)	237, 950
BstF5I	GGATG	2 cut(s)	509, 874
BstFNI	CGCG	3 cut(s)	177, 195, 345
BstHHI	GCGC	4 cut(s)	159, 195, 197, 345
BstKTI	GATC	4 cut(s)	120, 234, 432, 713
BstMAI	GTCTC	2 cut(s)	263, 824
BstMBI	GATC	4 cut(s)	117, 231, 429, 710
BstMWI	GCNNNNNNNGC	3 cut(s)	122, 136, 179
BstNI	CCWGG	2 cut(s)	256, 750
BstSCI	CCNGG	2 cut(s)	254, 748
BstSFI	CTRYAG	1 cut(s)	956
BstUI	CGCG	3 cut(s)	177, 195, 345
BstV1I	GCAGC	2 cut(s)	148, 970
BstV2I	GAAGAC	1 cut(s)	905
BstX2I	RGATCY	1 cut(s)	231
BstYI	RGATCY	1 cut(s)	231
BsuRI	GGCC	3 cut(s)	167, 400, 927
BtsCI	GGATG	2 cut(s)	509, 874
BtsIMutI	CAGTG	1 cut(s)	432
BtuMI	TCGCGA	1 cut(s)	177
Cac8I	GCNNGC	2 cut(s)	175, 195
CciI	TCATGA	1 cut(s)	652
CfoI	GCGC	4 cut(s)	159, 195, 197, 345
Cfr13I	GGNCC	4 cut(s)	398, 578, 926, 966
CseI	GACGC	1 cut(s)	188
CviAII	CATG	3 cut(s)	635, 653, 962
DdeI	CTNAG	2 cut(s)	237, 950
DpnI	GATC	4 cut(s)	119, 233, 431, 712
DpnII	GATC	4 cut(s)	117, 231, 429, 710
DraI	TTTAAA	1 cut(s)	339
Eam1104I	CTCTTC	3 cut(s)	62, 101, 288
EarI	CTCTTC	3 cut(s)	62, 101, 288
Ecl136II	GAGCTC	1 cut(s)	205
Eco130I	CCWWGG	3 cut(s)	691, 864, 873
Eco24I	GRGCYC	2 cut(s)	207, 660
Eco32I	GATATC	1 cut(s)	625
Eco47I	GGWCC	2 cut(s)	578, 966
Eco53kI	GAGCTC	1 cut(s)	205
Eco57I	CTGAAG	1 cut(s)	899
Eco88I	CYCGRG	3 cut(s)	149, 200, 659
EcoICRI	GAGCTC	1 cut(s)	205
EcoO109I	RGGNCCY	2 cut(s)	398, 966
EcoRI	GAATTC	1 cut(s)	260
EcoRII	CCWGG	2 cut(s)	254, 748
EcoRV	GATATC	1 cut(s)	625
EcoT14I	CCWWGG	3 cut(s)	691, 864, 873
EcoT38I	GRGCYC	2 cut(s)	207, 660
ErhI	CCWWGG	3 cut(s)	691, 864, 873
FaeI	CATG	3 cut(s)	638, 656, 965
FaiI	YATR	9 cut(s)	450, 465, 515, 636, 654, 791, 813, 963, 993
FalI	AAGNNNNNCTT	4 cut(s)	445, 477, 488, 520
FaqI	GGGAC	1 cut(s)	979
FatI	CATG	3 cut(s)	634, 652, 961
FauI	CCCGC	1 cut(s)	977
Fnu4HI	GCNGC	3 cut(s)	137, 183, 959
FokI	GGATG	2 cut(s)	496, 881
FriOI	GRGCYC	2 cut(s)	207, 660
Fsp4HI	GCNGC	3 cut(s)	137, 183, 959
FspBI	CTAG	2 cut(s)	393, 1023
GlaI	GCGC	4 cut(s)	158, 194, 196, 344
GluI	GCNGC	3 cut(s)	137, 183, 959
HaeIII	GGCC	3 cut(s)	167, 400, 927
HapII	CCGG	3 cut(s)	221, 799, 1010
HgaI	GACGC	1 cut(s)	188
HhaI	GCGC	4 cut(s)	159, 195, 197, 345
Hin1I	GRCGYC	1 cut(s)	180
Hin1II	CATG	3 cut(s)	638, 656, 965
Hin6I	GCGC	4 cut(s)	157, 193, 195, 343
HinP1I	GCGC	4 cut(s)	157, 193, 195, 343
HinfI	GANTC	4 cut(s)	76, 352, 631, 845
HpaII	CCGG	3 cut(s)	221, 799, 1010
HphI	GGTGA	2 cut(s)	890, 928
Hpy166II	GTNNAC	3 cut(s)	526, 887, 1003
Hpy188III	TCNNGA	6 cut(s)	151, 176, 200, 628, 653, 917
Hpy8I	GTNNAC	3 cut(s)	526, 887, 1003
Hpy99I	CGWCG	4 cut(s)	88, 182, 290, 293
HpyAV	CCTTC	2 cut(s)	32, 157
HpyCH4III	ACNGT	2 cut(s)	274, 720
HpyCH4V	TGCA	3 cut(s)	440, 491, 958
HpyF10VI	GCNNNNNNNGC	3 cut(s)	122, 136, 179
HpyF3I	CTNAG	2 cut(s)	237, 950
Hsp92I	GRCGYC	1 cut(s)	180
Hsp92II	CATG	3 cut(s)	638, 656, 965
HspAI	GCGC	4 cut(s)	157, 193, 195, 343
Kzo9I	GATC	4 cut(s)	117, 231, 429, 710
LguI	GCTCTTC	1 cut(s)	288
LmnI	GCTCC	1 cut(s)	214
Lsp1109I	GCAGC	2 cut(s)	148, 970
LweI	GCATC	4 cut(s)	304, 538, 811, 859
MaeI	CTAG	2 cut(s)	393, 1023
MaeIII	GTNAC	2 cut(s)	720, 763
MalI	GATC	4 cut(s)	119, 233, 431, 712
MboI	GATC	4 cut(s)	117, 231, 429, 710
MflI	RGATCY	1 cut(s)	231
MhlI	GDGCHC	2 cut(s)	207, 660
MluCI	AATT	6 cut(s)	260, 323, 485, 516, 561, 676
MlyI	GAGTC	2 cut(s)	346, 854
MmeI	TCCRAC	1 cut(s)	668
MroXI	GAANNNNTTC	1 cut(s)	503
MseI	TTAA	5 cut(s)	338, 365, 407, 671, 942
MspI	CCGG	3 cut(s)	221, 799, 1010
MspR9I	CCNGG	2 cut(s)	256, 750
MvaI	CCWGG	2 cut(s)	256, 750
MvnI	CGCG	3 cut(s)	177, 195, 345
MwoI	GCNNNNNNNGC	3 cut(s)	122, 136, 179
NdeII	GATC	4 cut(s)	117, 231, 429, 710
NlaIII	CATG	3 cut(s)	638, 656, 965
NlaIV	GGNNCC	3 cut(s)	399, 543, 967
NmeAIII	GCCGAG	2 cut(s)	186, 211
NmuCI	GTSAC	1 cut(s)	720
NruI	TCGCGA	1 cut(s)	177
PaeR7I	CTCGAG	2 cut(s)	149, 200
PagI	TCATGA	1 cut(s)	652
PauI	GCGCGC	1 cut(s)	193
PciSI	GCTCTTC	1 cut(s)	288
PcsI	WCGNNNNNNNCGW	1 cut(s)	207
PdmI	GAANNNNTTC	1 cut(s)	503
PfeI	GAWTC	2 cut(s)	76, 631
PflFI	GACNNNGTC	1 cut(s)	844
PkrI	GCNGC	3 cut(s)	138, 184, 960
PleI	GAGTC	2 cut(s)	346, 853
PpsI	GAGTC	2 cut(s)	346, 853
PpuMI	RGGWCCY	1 cut(s)	966
PshBI	ATTAAT	1 cut(s)	365
Psp124BI	GAGCTC	1 cut(s)	207
Psp5II	RGGWCCY	1 cut(s)	966
Psp6I	CCWGG	2 cut(s)	254, 748
PspGI	CCWGG	2 cut(s)	254, 748
PspN4I	GGNNCC	3 cut(s)	399, 543, 967
PspPI	GGNCC	4 cut(s)	398, 578, 926, 966
PspPPI	RGGWCCY	1 cut(s)	966
PstI	CTGCAG	1 cut(s)	960
PsuI	RGATCY	1 cut(s)	231
PsyI	GACNNNGTC	1 cut(s)	844
PteI	GCGCGC	1 cut(s)	193
RruI	TCGCGA	1 cut(s)	177
SacI	GAGCTC	1 cut(s)	207
SapI	GCTCTTC	1 cut(s)	288
SaqAI	TTAA	5 cut(s)	338, 365, 407, 671, 942
SatI	GCNGC	3 cut(s)	137, 183, 959
Sau3AI	GATC	4 cut(s)	117, 231, 429, 710
Sau96I	GGNCC	4 cut(s)	398, 578, 926, 966
SchI	GAGTC	2 cut(s)	346, 854
ScrFI	CCNGG	2 cut(s)	256, 750
SduI	GDGCHC	2 cut(s)	207, 660
SfaNI	GCATC	4 cut(s)	304, 538, 811, 859
SfcI	CTRYAG	1 cut(s)	956
Sfr274I	CTCGAG	2 cut(s)	149, 200
SinI	GGWCC	2 cut(s)	578, 966
SlaI	CTCGAG	2 cut(s)	149, 200
SmlI	CTYRAG	4 cut(s)	131, 149, 200, 891
SmoI	CTYRAG	4 cut(s)	131, 149, 200, 891
Sse9I	AATT	6 cut(s)	260, 323, 485, 516, 561, 676
SsiI	CCGC	2 cut(s)	183, 984
SspI	AATATT	1 cut(s)	363
SspMI	CTAG	2 cut(s)	393, 1023
SstI	GAGCTC	1 cut(s)	207
StyD4I	CCNGG	2 cut(s)	254, 748
StyI	CCWWGG	3 cut(s)	691, 864, 873
TaaI	ACNGT	2 cut(s)	274, 720
TaqI	TCGA	5 cut(s)	86, 150, 201, 264, 332
TaqII	GACCGA	1 cut(s)	857
TasI	AATT	6 cut(s)	260, 323, 485, 516, 561, 676
TauI	GCSGC	1 cut(s)	185
TfiI	GAWTC	2 cut(s)	76, 631
Tru1I	TTAA	5 cut(s)	338, 365, 407, 671, 942
Tru9I	TTAA	5 cut(s)	338, 365, 407, 671, 942
TscAI	CASTG	1 cut(s)	432
TseFI	GTSAC	1 cut(s)	720
TseI	GCWGC	2 cut(s)	136, 958
Tsp45I	GTSAC	1 cut(s)	720
TspDTI	ATGAA	2 cut(s)	63, 336
TspRI	CASTG	1 cut(s)	432
Tth111I	GACNNNGTC	1 cut(s)	844
VpaK11BI	GGWCC	2 cut(s)	578, 966
VspI	ATTAAT	1 cut(s)	365
XapI	RAATTY	3 cut(s)	260, 323, 485
XhoI	CTCGAG	2 cut(s)	149, 200
XmnI	GAANNNNTTC	1 cut(s)	503
XspI	CTAG	2 cut(s)	393, 1023

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.