Zinc finger protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G27310 AT5G54470 |
| fragaria_vesca | FvH4_3g03640 FvH4_3g21230 FvH4_3g21230 FvH4_6g44270 |
| malus_domestica | MD09G1099500.v1.1 |
| prunus_persica | Prupe.3G226900_v2.0.a1 Prupe.3G226900_v2.0.a1 Prupe.4G033600_v2.0.a1 Prupe.4G192700_v2.0.a1 Prupe.4G192700_v2.0.a1 |
| pyrus_communis | pycom09g02300 pycom10g25840 pycom11g20620 pycom17g08480 |
| rosa_chinensis | RchiOBHm_Chr2g0161131 RchiOBHm_Chr5g0005681 RchiOBHm_Chr5g0036301 |
| rosa_laevigata | RLG00000021259 RLG00000031317 RLG00000033685 |
| rosa_multiflora | Rmu_sc0000247.1_g000074 Rmu_sc0000955.1_g000044 Rmu_sc0006420.1_g000032 Rmu_sc0022348.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00044490 Rroxscaffold_1G00070160 Rroxscaffold_2G00089120 |
| rosa_rugosa | Rorug02G0486200 Rorug04G0417200 Rorug05G0154900 |
| rosa_samantha | Rh2AG552700 Rh2BG566700 Rh2CG536400 Rh2DG575700 Rh5AG044800 Rh5AG248300 Rh5BG249000 Rh5CG052400 Rh5CG280200 Rh5DG257600 |
| rosa_wichuraiana | Rw0G008350 Rw2G045730 Rw5G004500 Rw5G022790 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 95, 349 |
| AccII | CGCG | 1 cut(s) | 616 |
| AciI | CCGC | 3 cut(s) | 267, 371, 591 |
| AclWI | GGATC | 2 cut(s) | 293, 504 |
| AcoI | YGGCCR | 2 cut(s) | 187, 453 |
| AcsI | RAATTY | 1 cut(s) | 281 |
| AcyI | GRCGYC | 2 cut(s) | 81, 158 |
| AfaI | GTAC | 1 cut(s) | 545 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 590 |
| AgsI | TTSAA | 1 cut(s) | 472 |
| AjnI | CCWGG | 1 cut(s) | 54 |
| AluBI | AGCT | 7 cut(s) | 16, 25, 184, 213, 390, 554, 563 |
| AluI | AGCT | 7 cut(s) | 16, 25, 184, 213, 390, 554, 563 |
| Alw21I | GWGCWC | 1 cut(s) | 392 |
| Alw26I | GTCTC | 2 cut(s) | 156, 231 |
| AlwI | GGATC | 2 cut(s) | 293, 504 |
| AoxI | GGCC | 5 cut(s) | 168, 187, 453, 575, 650 |
| ApeKI | GCWGC | 3 cut(s) | 399, 410, 560 |
| ApoI | RAATTY | 1 cut(s) | 281 |
| AspS9I | GGNCC | 4 cut(s) | 52, 443, 576, 650 |
| AsuC2I | CCSGG | 2 cut(s) | 654, 701 |
| AsuHPI | GGTGA | 1 cut(s) | 188 |
| AvaII | GGWCC | 2 cut(s) | 52, 443 |
| BanI | GGYRCC | 2 cut(s) | 95, 349 |
| BanII | GRGCYC | 1 cut(s) | 392 |
| BbsI | GAAGAC | 3 cut(s) | 249, 255, 351 |
| Bbv12I | GWGCWC | 1 cut(s) | 392 |
| BbvI | GCAGC | 3 cut(s) | 397, 411, 572 |
| BceAI | ACGGC | 5 cut(s) | 337, 468, 504, 562, 646 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 392, 426 |
| BciT130I | CCWGG | 1 cut(s) | 56 |
| BcnI | CCSGG | 2 cut(s) | 654, 701 |
| BcoDI | GTCTC | 2 cut(s) | 156, 231 |
| BfaI | CTAG | 1 cut(s) | 123 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 267 |
| BisI | GCNGC | 4 cut(s) | 268, 400, 411, 561 |
| BlpI | GCTNAGC | 1 cut(s) | 550 |
| BlsI | GCNGC | 4 cut(s) | 269, 401, 412, 562 |
| Bme1390I | CCNGG | 3 cut(s) | 56, 654, 701 |
| Bme18I | GGWCC | 2 cut(s) | 52, 443 |
| BmgT120I | GGNCC | 4 cut(s) | 52, 443, 576, 650 |
| BmiI | GGNNCC | 5 cut(s) | 97, 128, 351, 445, 595 |
| BmrFI | CCNGG | 3 cut(s) | 56, 654, 701 |
| BpiI | GAAGAC | 3 cut(s) | 249, 255, 351 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 550 |
| BpuEI | CTTGAG | 1 cut(s) | 549 |
| BpuMI | CCSGG | 2 cut(s) | 654, 701 |
| Bsa29I | ATCGAT | 1 cut(s) | 639 |
| BsaBI | GATNNNNATC | 1 cut(s) | 297 |
| BsaHI | GRCGYC | 2 cut(s) | 81, 158 |
| BsaJI | CCNNGG | 4 cut(s) | 84, 161, 262, 353 |
| BsaWI | WCCGGW | 1 cut(s) | 173 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 358, 388 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 590 |
| Bse3DI | GCAATG | 1 cut(s) | 277 |
| Bse8I | GATNNNNATC | 1 cut(s) | 297 |
| BseBI | CCWGG | 1 cut(s) | 56 |
| BseCI | ATCGAT | 1 cut(s) | 639 |
| BseDI | CCNNGG | 4 cut(s) | 84, 161, 262, 353 |
| BseJI | GATNNNNATC | 1 cut(s) | 297 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 590 |
| BseMI | GCAATG | 1 cut(s) | 277 |
| BseMII | CTCAG | 2 cut(s) | 521, 564 |
| BseRI | GAGGAG | 2 cut(s) | 122, 601 |
| BseXI | GCAGC | 3 cut(s) | 397, 411, 572 |
| BseYI | CCCAGC | 1 cut(s) | 69 |
| Bsh1236I | CGCG | 1 cut(s) | 616 |
| Bsh1285I | CGRYCG | 1 cut(s) | 523 |
| BshFI | GGCC | 5 cut(s) | 170, 189, 455, 577, 652 |
| BshNI | GGYRCC | 2 cut(s) | 95, 349 |
| BshVI | ATCGAT | 1 cut(s) | 639 |
| BsiEI | CGRYCG | 1 cut(s) | 523 |
| BsiHKAI | GWGCWC | 1 cut(s) | 392 |
| BsiSI | CCGG | 3 cut(s) | 174, 653, 700 |
| BslFI | GGGAC | 2 cut(s) | 86, 429 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 590 |
| BsmAI | GTCTC | 2 cut(s) | 156, 231 |
| BsmBI | CGTCTC | 1 cut(s) | 231 |
| BsmFI | GGGAC | 2 cut(s) | 86, 429 |
| BsnI | GGCC | 5 cut(s) | 170, 189, 455, 577, 652 |
| Bsp1286I | GDGCHC | 1 cut(s) | 392 |
| Bsp143I | GATC | 5 cut(s) | 298, 496, 514, 640, 716 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 550 |
| Bsp68I | TCGCGA | 1 cut(s) | 616 |
| BspACI | CCGC | 3 cut(s) | 267, 371, 591 |
| BspANI | GGCC | 5 cut(s) | 170, 189, 455, 577, 652 |
| BspCNI | CTCAG | 2 cut(s) | 520, 563 |
| BspDI | ATCGAT | 1 cut(s) | 639 |
| BspFNI | CGCG | 1 cut(s) | 616 |
| BspLI | GGNNCC | 5 cut(s) | 97, 128, 351, 445, 595 |
| BspPI | GGATC | 2 cut(s) | 293, 504 |
| BspT107I | GGYRCC | 2 cut(s) | 95, 349 |
| BsrDI | GCAATG | 1 cut(s) | 277 |
| BssECI | CCNNGG | 4 cut(s) | 84, 161, 262, 353 |
| BssMI | GATC | 5 cut(s) | 298, 496, 514, 640, 716 |
| BssNI | GRCGYC | 2 cut(s) | 81, 158 |
| BssT1I | CCWWGG | 3 cut(s) | 84, 161, 262 |
| Bst2UI | CCWGG | 1 cut(s) | 56 |
| Bst4CI | ACNGT | 4 cut(s) | 95, 381, 463, 524 |
| Bst6I | CTCTTC | 2 cut(s) | 249, 399 |
| BstACI | GRCGYC | 2 cut(s) | 81, 158 |
| BstC8I | GCNNGC | 2 cut(s) | 14, 23 |
| BstDEI | CTNAG | 2 cut(s) | 507, 550 |
| BstDSI | CCRYGG | 1 cut(s) | 353 |
| BstFNI | CGCG | 1 cut(s) | 616 |
| BstKTI | GATC | 5 cut(s) | 301, 499, 517, 643, 719 |
| BstMAI | GTCTC | 2 cut(s) | 156, 231 |
| BstMBI | GATC | 5 cut(s) | 298, 496, 514, 640, 716 |
| BstMCI | CGRYCG | 1 cut(s) | 523 |
| BstNI | CCWGG | 1 cut(s) | 56 |
| BstSCI | CCNGG | 3 cut(s) | 54, 652, 699 |
| BstUI | CGCG | 1 cut(s) | 616 |
| BstV1I | GCAGC | 3 cut(s) | 397, 411, 572 |
| BstV2I | GAAGAC | 3 cut(s) | 249, 255, 351 |
| BstX2I | RGATCY | 1 cut(s) | 496 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 106 |
| BstYI | RGATCY | 1 cut(s) | 496 |
| Bsu15I | ATCGAT | 1 cut(s) | 639 |
| BsuRI | GGCC | 5 cut(s) | 170, 189, 455, 577, 652 |
| BsuTUI | ATCGAT | 1 cut(s) | 639 |
| BtgI | CCRYGG | 1 cut(s) | 353 |
| BtuMI | TCGCGA | 1 cut(s) | 616 |
| Cac8I | GCNNGC | 2 cut(s) | 14, 23 |
| Cfr13I | GGNCC | 4 cut(s) | 52, 443, 576, 650 |
| ClaI | ATCGAT | 1 cut(s) | 639 |
| CseI | GACGC | 2 cut(s) | 89, 166 |
| Csp6I | GTAC | 1 cut(s) | 544 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 586, 621 |
| CviQI | GTAC | 1 cut(s) | 544 |
| DdeI | CTNAG | 2 cut(s) | 507, 550 |
| DpnI | GATC | 5 cut(s) | 300, 498, 516, 642, 718 |
| DpnII | GATC | 5 cut(s) | 298, 496, 514, 640, 716 |
| EaeI | YGGCCR | 2 cut(s) | 187, 453 |
| Eam1104I | CTCTTC | 2 cut(s) | 249, 399 |
| EarI | CTCTTC | 2 cut(s) | 249, 399 |
| EciI | GGCGGA | 1 cut(s) | 606 |
| Ecl136II | GAGCTC | 1 cut(s) | 390 |
| Eco130I | CCWWGG | 3 cut(s) | 84, 161, 262 |
| Eco147I | AGGCCT | 1 cut(s) | 170 |
| Eco24I | GRGCYC | 1 cut(s) | 392 |
| Eco47I | GGWCC | 2 cut(s) | 52, 443 |
| Eco53kI | GAGCTC | 1 cut(s) | 390 |
| EcoICRI | GAGCTC | 1 cut(s) | 390 |
| EcoO109I | RGGNCCY | 1 cut(s) | 443 |
| EcoRII | CCWGG | 1 cut(s) | 54 |
| EcoT14I | CCWWGG | 3 cut(s) | 84, 161, 262 |
| EcoT38I | GRGCYC | 1 cut(s) | 392 |
| ErhI | CCWWGG | 3 cut(s) | 84, 161, 262 |
| Esp3I | CGTCTC | 1 cut(s) | 231 |
| FaiI | YATR | 2 cut(s) | 192, 694 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 696 |
| FaqI | GGGAC | 2 cut(s) | 86, 429 |
| FauI | CCCGC | 1 cut(s) | 378 |
| Fnu4HI | GCNGC | 4 cut(s) | 268, 400, 411, 561 |
| FriOI | GRGCYC | 1 cut(s) | 392 |
| Fsp4HI | GCNGC | 4 cut(s) | 268, 400, 411, 561 |
| FspBI | CTAG | 1 cut(s) | 123 |
| GluI | GCNGC | 4 cut(s) | 268, 400, 411, 561 |
| GsaI | CCCAGC | 1 cut(s) | 73 |
| HaeIII | GGCC | 5 cut(s) | 170, 189, 455, 577, 652 |
| HapII | CCGG | 3 cut(s) | 174, 653, 700 |
| HgaI | GACGC | 2 cut(s) | 89, 166 |
| Hin1I | GRCGYC | 2 cut(s) | 81, 158 |
| HinfI | GANTC | 7 cut(s) | 47, 287, 477, 571, 608, 636, 680 |
| HpaII | CCGG | 3 cut(s) | 174, 653, 700 |
| HphI | GGTGA | 1 cut(s) | 188 |
| Hpy166II | GTNNAC | 1 cut(s) | 91 |
| Hpy188I | TCNGA | 7 cut(s) | 52, 156, 224, 292, 482, 496, 667 |
| Hpy188III | TCNNGA | 6 cut(s) | 302, 509, 518, 534, 615, 720 |
| Hpy8I | GTNNAC | 1 cut(s) | 91 |
| Hpy99I | CGWCG | 5 cut(s) | 83, 160, 367, 385, 540 |
| HpyAV | CCTTC | 4 cut(s) | 160, 434, 581, 722 |
| HpyCH4III | ACNGT | 4 cut(s) | 95, 381, 463, 524 |
| HpyCH4IV | ACGT | 1 cut(s) | 194 |
| HpyCH4V | TGCA | 1 cut(s) | 32 |
| HpyF3I | CTNAG | 2 cut(s) | 507, 550 |
| HpySE526I | ACGT | 1 cut(s) | 194 |
| Hsp92I | GRCGYC | 2 cut(s) | 81, 158 |
| Kzo9I | GATC | 5 cut(s) | 298, 496, 514, 640, 716 |
| LmnI | GCTCC | 2 cut(s) | 126, 593 |
| Lsp1109I | GCAGC | 3 cut(s) | 397, 411, 572 |
| MaeI | CTAG | 1 cut(s) | 123 |
| MaeII | ACGT | 1 cut(s) | 194 |
| MalI | GATC | 5 cut(s) | 300, 498, 516, 642, 718 |
| MboI | GATC | 5 cut(s) | 298, 496, 514, 640, 716 |
| MflI | RGATCY | 1 cut(s) | 496 |
| MhlI | GDGCHC | 1 cut(s) | 392 |
| MluCI | AATT | 2 cut(s) | 100, 281 |
| MlyI | GAGTC | 4 cut(s) | 281, 580, 602, 689 |
| MmeI | TCCRAC | 1 cut(s) | 179 |
| MnlI | CCTC | 9 cut(s) | 108, 140, 143, 181, 322, 384, 400, 534, 622 |
| MseI | TTAA | 1 cut(s) | 422 |
| MspI | CCGG | 3 cut(s) | 174, 653, 700 |
| MspR9I | CCNGG | 3 cut(s) | 56, 654, 701 |
| MvaI | CCWGG | 1 cut(s) | 56 |
| MvnI | CGCG | 1 cut(s) | 616 |
| NciI | CCSGG | 2 cut(s) | 654, 701 |
| NdeII | GATC | 5 cut(s) | 298, 496, 514, 640, 716 |
| NlaIV | GGNNCC | 5 cut(s) | 97, 128, 351, 445, 595 |
| NmeAIII | GCCGAG | 2 cut(s) | 165, 411 |
| NruI | TCGCGA | 1 cut(s) | 616 |
| PceI | AGGCCT | 1 cut(s) | 170 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 56, 628 |
| PfeI | GAWTC | 3 cut(s) | 47, 477, 636 |
| PkrI | GCNGC | 4 cut(s) | 269, 401, 412, 562 |
| PleI | GAGTC | 4 cut(s) | 281, 579, 602, 688 |
| PpsI | GAGTC | 4 cut(s) | 281, 579, 602, 688 |
| PpuMI | RGGWCCY | 1 cut(s) | 443 |
| Psp124BI | GAGCTC | 1 cut(s) | 392 |
| Psp5II | RGGWCCY | 1 cut(s) | 443 |
| Psp6I | CCWGG | 1 cut(s) | 54 |
| PspFI | CCCAGC | 1 cut(s) | 69 |
| PspGI | CCWGG | 1 cut(s) | 54 |
| PspN4I | GGNNCC | 5 cut(s) | 97, 128, 351, 445, 595 |
| PspPI | GGNCC | 4 cut(s) | 52, 443, 576, 650 |
| PspPPI | RGGWCCY | 1 cut(s) | 443 |
| PsuI | RGATCY | 1 cut(s) | 496 |
| RruI | TCGCGA | 1 cut(s) | 616 |
| RsaI | GTAC | 1 cut(s) | 545 |
| RsaNI | GTAC | 1 cut(s) | 544 |
| SacI | GAGCTC | 1 cut(s) | 392 |
| SaqAI | TTAA | 1 cut(s) | 422 |
| SatI | GCNGC | 4 cut(s) | 268, 400, 411, 561 |
| Sau3AI | GATC | 5 cut(s) | 298, 496, 514, 640, 716 |
| Sau96I | GGNCC | 4 cut(s) | 52, 443, 576, 650 |
| SchI | GAGTC | 4 cut(s) | 281, 580, 602, 689 |
| ScrFI | CCNGG | 3 cut(s) | 56, 654, 701 |
| SduI | GDGCHC | 1 cut(s) | 392 |
| SinI | GGWCC | 2 cut(s) | 52, 443 |
| SmlI | CTYRAG | 1 cut(s) | 564 |
| SmoI | CTYRAG | 1 cut(s) | 564 |
| Sse9I | AATT | 2 cut(s) | 100, 281 |
| SseBI | AGGCCT | 1 cut(s) | 170 |
| SsiI | CCGC | 3 cut(s) | 267, 371, 591 |
| SspMI | CTAG | 1 cut(s) | 123 |
| SstI | GAGCTC | 1 cut(s) | 392 |
| StuI | AGGCCT | 1 cut(s) | 170 |
| StyD4I | CCNGG | 3 cut(s) | 54, 652, 699 |
| StyI | CCWWGG | 3 cut(s) | 84, 161, 262 |
| TaaI | ACNGT | 4 cut(s) | 95, 381, 463, 524 |
| TaiI | ACGT | 1 cut(s) | 197 |
| TaqI | TCGA | 7 cut(s) | 362, 395, 519, 535, 639, 683, 715 |
| TaqII | GACCGA | 1 cut(s) | 645 |
| TasI | AATT | 2 cut(s) | 100, 281 |
| TauI | GCSGC | 1 cut(s) | 270 |
| TfiI | GAWTC | 3 cut(s) | 47, 477, 636 |
| Tru1I | TTAA | 1 cut(s) | 422 |
| Tru9I | TTAA | 1 cut(s) | 422 |
| TseI | GCWGC | 3 cut(s) | 399, 410, 560 |
| TspDTI | ATGAA | 4 cut(s) | 17, 243, 294, 516 |
| TspGWI | ACGGA | 3 cut(s) | 190, 348, 553 |
| VpaK11BI | GGWCC | 2 cut(s) | 52, 443 |
| XapI | RAATTY | 1 cut(s) | 281 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 106 |
| XspI | CTAG | 1 cut(s) | 123 |