Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0001915

Physical Location & Seq

Genomic Coordinates Reverse (-)

57844297 .. 57847407

Gene Structure 3111 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0417200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1713 bp

ATGGCGGTAATAGCATCATTAGGCTTCAACCTCTTCTCCTCTCTTTCTCAACCTAACGACCCAAATCCCAACGCAACCTCCACCTCCGCCTCCGCCTCGCCGCCGATCCCAATTCCAAAATACCCGCCGCCGATCAAAAAGCCCCGAAATAATGCTGCTCCTCCTCCTCCTCCCAACCCGGCCCTCAAAAACTTCCACCGCCGCACCAAATACTACAAGCCCGTCCGCGACGGCGTCATCACCACCGACGGCGACCGCGCCGTCGTCATCGGCGAAAACGGCCTGTCGTACCAGCTCCCCGGCGCGCCGTTCGAGTTCCAGTACAGCTACTCGGAGACGCCAAAGGTCAAGCCTTTGGCGATTCGCGAGCCGGCGTTCCTGCCGTTCGCGCCGCCGACAATGCCGCGGCCGTGGACCGGAAAAGCGCCGTTGAAGAGCGCCAAGGAGAAGAAGATTAAGCGGAAAGTCCCGCTCTTTGACTCGTTTAACCCGCCGGCGCCGGGAACCAAAGGAGTGAAGCGGGTCGAAATGCCCGGCCCGTTTGATTTGGGGAAGCGCCCGAAACCCGGAAAAACGCGGGAGGAGATTCTCGGCGAGCCGTTGAAGCGGTGGGAGGTGAAAATGCTCGTAAAGGAGCAGTTGTCCGATAGCCGGCAAGTCAATCTCGGAAGAGATGGATTGACGCATAATATGTTGGATTTGATACATTCGCATTGGAAGAGACGCAGGGTGTGTAGAGTGAAATGTAAAGGTGTTCCAACTGTGGATATGGATAACATTTGCCGCCATATTGAGGAAAGAACTGGGGGGAAGATCATTCATCGAGTTGGTGGTGTAGTATATCTTTTTCGGGGAAGAAACTATAACTATAACACCCGTCCGCAGTATCCACTGATGCTGTGGAAACCAGCTGCTCCGGTTTATCCCAAACTGATCCAAGAGGCTCCTGAAGGATTGACAAAAGATGAAGCTGAAGAGTTGAGAAAGAAAGGGAAAAGACTCTTGCCTATATGTACATTAGCCAAAAATGGAGTATACATCTCCTTGGTTAGAGATGTTAGGCATGCTTTTGAAGGAAGTTCTTTAGTAAAGGTTGACTGCAAAGGGATGCATGCAAGTGATTACAAAAAGTTGGGTGCTAAGCTTAAGGAATTGGTTCCTTGTGTACTGCTTTCTTTTGATGATGAACAGATATTGATGTGGAGGGGACCAGATTGGGTTTCAATGTCCCAAGAGGTGCCTCCACATTCAGAGTATTCTGATGTTGATATTACAACATCAAAAGCGAGAGTTAAGGATGACGATGATTCTAGTAAGCCAGACACGAAAACAGTGATATCAAGCCCTAAAATGATGTCGCTCTGGAAACACTCAATTGAAACAAACAAAGCATTGTTGCTAGATGAACTTGACCTTGATCCCGATGCTCTCTTGAAGAAGGTTGAGGAATTCGAAGGCATTTCACAGGCCACAGAGCACTCCTATCCAGCATTAATCCTCTCAAGCGAAGATGGCACCAGCAGCGCAATCCAAGTGTATGAAGATGTTCCTCAGAATGGCCCTTATAGCGAATACGAAGACTCGTACAGTGATAACAATGACGATTATGTATACGATGATGATACCGATGACGATGCGTTATACGATAGTGATTCACCCCCCTTGGGGTCATTACCCGTTGATGTAATAGCAGAGAAACTCGATCATGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-B_box

Protein Analysis

570

Amino Acids

63.86

Weight (kDa)

7.18

Isoelectric Point (pI)

51.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CRS1_YhbY	PF01985	202 - 284	3.3e-17	CRS1 / YhbY (CRM) domain
CRS1_YhbY	PF01985	319 - 402	1.7e-14	CRS1 / YhbY (CRM) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001915)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G27310 AT5G54470
fragaria_vesca	FvH4_3g03640 FvH4_3g21230 FvH4_3g21230 FvH4_6g44270
malus_domestica	MD09G1099500.v1.1
prunus_persica	Prupe.3G226900_v2.0.a1 Prupe.3G226900_v2.0.a1 Prupe.4G033600_v2.0.a1 Prupe.4G192700_v2.0.a1 Prupe.4G192700_v2.0.a1
pyrus_communis	pycom09g02300 pycom10g25840 pycom11g20620 pycom17g08480
rosa_chinensis	RchiOBHm_Chr2g0161131 RchiOBHm_Chr5g0005681 RchiOBHm_Chr5g0036301
rosa_laevigata	RLG00000021259 RLG00000031317 RLG00000033685
rosa_multiflora	Rmu_sc0000247.1_g000074 Rmu_sc0000955.1_g000044 Rmu_sc0006420.1_g000032 Rmu_sc0022348.1_g000001
rosa_roxburghii	Rroxscaffold_1G00044490 Rroxscaffold_1G00070160 Rroxscaffold_2G00089120
rosa_rugosa	Rorug02G0486200 Rorug04G0417200 Rorug05G0154900
rosa_samantha	Rh2AG552700 Rh2BG566700 Rh2CG536400 Rh2DG575700 Rh5AG044800 Rh5AG248300 Rh5BG249000 Rh5CG052400 Rh5CG280200 Rh5DG257600
rosa_wichuraiana	Rw0G008350 Rw2G045730 Rw5G004500 Rw5G022790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	260
AccB1I	GGYRCC	3 cut(s)	496, 1237, 1514
AccBSI	CCGCTC	1 cut(s)	472
AccI	GTMKAC	2 cut(s)	1035, 1611
AccII	CGCG	7 cut(s)	228, 258, 305, 366, 389, 406, 577
AclWI	GGATC	3 cut(s)	100, 928, 1412
AcoI	YGGCCR	1 cut(s)	407
AcsI	RAATTY	1 cut(s)	1448
AcuI	CTGAAG	2 cut(s)	969, 993
AcyI	GRCGYC	3 cut(s)	234, 338, 497
AfaI	GTAC	5 cut(s)	290, 323, 1015, 1167, 1586
AfiI	CCNNNNNNNGG	8 cut(s)	416, 500, 566, 651, 793, 1556, 1664, 1665
AflII	CTTAAG	1 cut(s)	1145
AgsI	TTSAA	7 cut(s)	28, 433, 604, 1073, 1224, 1379, 1435
AluBI	AGCT	5 cut(s)	295, 327, 911, 971, 1144
AluI	AGCT	5 cut(s)	295, 327, 911, 971, 1144
Alw21I	GWGCWC	1 cut(s)	1479
Alw26I	GTCTC	2 cut(s)	329, 715
AlwI	GGATC	3 cut(s)	100, 928, 1412
AoxI	GGCC	6 cut(s)	180, 280, 407, 535, 1467, 1558
ApeKI	GCWGC	3 cut(s)	155, 911, 1521
ApoI	RAATTY	1 cut(s)	1448
AscI	GGCGCGCC	1 cut(s)	303
AseI	ATTAAT	1 cut(s)	1493
Asp700I	GAANNNNTTC	2 cut(s)	1155, 1545
AspLEI	GCGC	9 cut(s)	260, 305, 307, 391, 427, 440, 499, 558, 1526
AspS9I	GGNCC	5 cut(s)	181, 414, 536, 1208, 1559
AsuC2I	CCSGG	5 cut(s)	179, 300, 501, 534, 567
AsuHPI	GGTGA	3 cut(s)	232, 628, 1647
AsuII	TTCGAA	1 cut(s)	1452
AvaII	GGWCC	2 cut(s)	414, 1208
BanI	GGYRCC	3 cut(s)	496, 1237, 1514
BbsI	GAAGAC	1 cut(s)	1584
Bbv12I	GWGCWC	1 cut(s)	1479
BbvI	GCAGC	3 cut(s)	142, 898, 1533
BccI	CCATC	2 cut(s)	668, 1505
BceAI	ACGGC	9 cut(s)	245, 247, 265, 292, 295, 367, 394, 412, 583
BcgI	CGANNNNNNTGC	2 cut(s)	1616, 1650
BciVI	GTATCC	1 cut(s)	897
BcnI	CCSGG	5 cut(s)	179, 300, 501, 534, 567
BcoDI	GTCTC	2 cut(s)	329, 715
BfaI	CTAG	2 cut(s)	1311, 1400
BfoI	RGCGCY	4 cut(s)	428, 441, 500, 559
BfrI	CTTAAG	1 cut(s)	1145
BfuI	GTATCC	1 cut(s)	897
BlpI	GCTNAGC	1 cut(s)	1140
Bme1390I	CCNGG	5 cut(s)	179, 300, 501, 534, 567
Bme18I	GGWCC	2 cut(s)	414, 1208
BmgT120I	GGNCC	5 cut(s)	181, 414, 536, 1208, 1559
BmiI	GGNNCC	7 cut(s)	498, 505, 945, 1158, 1209, 1239, 1516
BmrFI	CCNGG	5 cut(s)	179, 300, 501, 534, 567
BmrI	ACTGGG	1 cut(s)	813
BmsI	GCATC	5 cut(s)	23, 885, 1098, 1414, 1624
BmuI	ACTGGG	1 cut(s)	813
BpiI	GAAGAC	1 cut(s)	1584
Bpu1102I	GCTNAGC	1 cut(s)	1140
Bpu14I	TTCGAA	1 cut(s)	1452
BpuEI	CTTGAG	1 cut(s)	1486
BpuMI	CCSGG	5 cut(s)	179, 300, 501, 534, 567
BsaHI	GRCGYC	3 cut(s)	234, 338, 497
BsaJI	CCNNGG	6 cut(s)	298, 404, 410, 441, 1044, 1662
BsaWI	WCCGGW	2 cut(s)	416, 916
BsaXI	ACNNNNNCTCC	6 cut(s)	20, 50, 62, 92, 626, 656
Bsc4I	CCNNNNNNNGG	8 cut(s)	416, 500, 566, 651, 793, 1556, 1664, 1665
Bse118I	RCCGGY	3 cut(s)	370, 493, 651
Bse1I	ACTGG	2 cut(s)	319, 808
BseDI	CCNNGG	6 cut(s)	298, 404, 410, 441, 1044, 1662
BseGI	GGATG	2 cut(s)	1113, 1303
BseLI	CCNNNNNNNGG	8 cut(s)	416, 500, 566, 651, 793, 1556, 1664, 1665
BseMII	CTCAG	1 cut(s)	1565
BseNI	ACTGG	2 cut(s)	319, 808
BsePI	GCGCGC	1 cut(s)	303
BseRI	GAGGAG	6 cut(s)	28, 150, 153, 156, 159, 596
BseX3I	CGGCCG	1 cut(s)	407
BseXI	GCAGC	3 cut(s)	142, 898, 1533
Bsh1236I	CGCG	7 cut(s)	228, 258, 305, 366, 389, 406, 577
Bsh1285I	CGRYCG	2 cut(s)	256, 410
BshFI	GGCC	6 cut(s)	182, 282, 409, 537, 1469, 1560
BshNI	GGYRCC	3 cut(s)	496, 1237, 1514
BsiEI	CGRYCG	2 cut(s)	256, 410
BsiHKAI	GWGCWC	1 cut(s)	1479
BslFI	GGGAC	3 cut(s)	452, 1213, 1221
BslI	CCNNNNNNNGG	8 cut(s)	416, 500, 566, 651, 793, 1556, 1664, 1665
BsmAI	GTCTC	2 cut(s)	329, 715
BsmBI	CGTCTC	2 cut(s)	329, 715
BsmFI	GGGAC	3 cut(s)	452, 1213, 1221
BsnI	GGCC	6 cut(s)	182, 282, 409, 537, 1469, 1560
Bsp119I	TTCGAA	1 cut(s)	1452
Bsp1286I	GDGCHC	1 cut(s)	1479
Bsp1407I	TGTACA	1 cut(s)	1013
Bsp143I	GATC	6 cut(s)	105, 132, 813, 933, 1417, 1702
Bsp1720I	GCTNAGC	1 cut(s)	1140
Bsp68I	TCGCGA	1 cut(s)	366
BspANI	GGCC	6 cut(s)	182, 282, 409, 537, 1469, 1560
BspCNI	CTCAG	1 cut(s)	1564
BspFNI	CGCG	7 cut(s)	228, 258, 305, 366, 389, 406, 577
BspHI	TCATGA	1 cut(s)	1705
BspLI	GGNNCC	7 cut(s)	498, 505, 945, 1158, 1209, 1239, 1516
BspPI	GGATC	3 cut(s)	100, 928, 1412
BspQI	GCTCTTC	1 cut(s)	428
BspT104I	TTCGAA	1 cut(s)	1452
BspT107I	GGYRCC	3 cut(s)	496, 1237, 1514
BspTI	CTTAAG	1 cut(s)	1145
BsrBI	CCGCTC	1 cut(s)	472
BsrFI	RCCGGY	3 cut(s)	370, 493, 651
BsrGI	TGTACA	1 cut(s)	1013
BsrI	ACTGG	2 cut(s)	319, 808
BssAI	RCCGGY	3 cut(s)	370, 493, 651
BssECI	CCNNGG	6 cut(s)	298, 404, 410, 441, 1044, 1662
BssHII	GCGCGC	1 cut(s)	303
BssMI	GATC	6 cut(s)	105, 132, 813, 933, 1417, 1702
BssNAI	GTATAC	2 cut(s)	1036, 1612
BssNI	GRCGYC	3 cut(s)	234, 338, 497
BssT1I	CCWWGG	3 cut(s)	441, 1044, 1662
Bst1107I	GTATAC	2 cut(s)	1036, 1612
Bst4CI	ACNGT	3 cut(s)	763, 1333, 1589
Bst6I	CTCTTC	5 cut(s)	38, 428, 664, 713, 969
BstACI	GRCGYC	3 cut(s)	234, 338, 497
BstAFI	CTTAAG	1 cut(s)	1145
BstAUI	TGTACA	1 cut(s)	1013
BstBI	TTCGAA	1 cut(s)	1452
BstC8I	GCNNGC	8 cut(s)	305, 368, 372, 495, 596, 653, 1065, 1113
BstDEI	CTNAG	2 cut(s)	1140, 1551
BstDSI	CCRYGG	2 cut(s)	404, 410
BstF5I	GGATG	2 cut(s)	1113, 1303
BstFNI	CGCG	7 cut(s)	228, 258, 305, 366, 389, 406, 577
BstH2I	RGCGCY	4 cut(s)	428, 441, 500, 559
BstHHI	GCGC	9 cut(s)	260, 305, 307, 391, 427, 440, 499, 558, 1526
BstKTI	GATC	6 cut(s)	108, 135, 816, 936, 1420, 1705
BstMAI	GTCTC	2 cut(s)	329, 715
BstMBI	GATC	6 cut(s)	105, 132, 813, 933, 1417, 1702
BstMCI	CGRYCG	2 cut(s)	256, 410
BstMWI	GCNNNNNNNGC	8 cut(s)	11, 279, 388, 400, 604, 1512, 1521, 1566
BstNSI	RCATGY	2 cut(s)	1067, 1115
BstSCI	CCNGG	5 cut(s)	177, 298, 499, 532, 565
BstUI	CGCG	7 cut(s)	228, 258, 305, 366, 389, 406, 577
BstV1I	GCAGC	3 cut(s)	142, 898, 1533
BstV2I	GAAGAC	1 cut(s)	1584
BstZ17I	GTATAC	2 cut(s)	1036, 1612
BstZI	CGGCCG	1 cut(s)	407
BsuI	GTATCC	1 cut(s)	897
BsuRI	GGCC	6 cut(s)	182, 282, 409, 537, 1469, 1560
BtgI	CCRYGG	2 cut(s)	404, 410
BtsCI	GGATG	2 cut(s)	1113, 1303
BtsIMutI	CAGTG	3 cut(s)	890, 1338, 1594
BtuMI	TCGCGA	1 cut(s)	366
Cac8I	GCNNGC	8 cut(s)	305, 368, 372, 495, 596, 653, 1065, 1113
CciI	TCATGA	1 cut(s)	1705
CfoI	GCGC	9 cut(s)	260, 305, 307, 391, 427, 440, 499, 558, 1526
Cfr10I	RCCGGY	3 cut(s)	370, 493, 651
Cfr13I	GGNCC	5 cut(s)	181, 414, 536, 1208, 1559
Cfr42I	CCGCGG	1 cut(s)	407
CseI	GACGC	4 cut(s)	223, 346, 691, 732
Csp6I	GTAC	5 cut(s)	289, 322, 1014, 1166, 1585
CviAII	CATG	3 cut(s)	1064, 1112, 1706
CviQI	GTAC	5 cut(s)	289, 322, 1014, 1166, 1585
DdeI	CTNAG	2 cut(s)	1140, 1551
DinI	GGCGCC	1 cut(s)	498
DpnI	GATC	6 cut(s)	107, 134, 815, 935, 1419, 1704
DpnII	GATC	6 cut(s)	105, 132, 813, 933, 1417, 1702
DrdI	GACNNNNNNGTC	1 cut(s)	260
DseDI	GACNNNNNNGTC	1 cut(s)	260
EaeI	YGGCCR	1 cut(s)	407
EagI	CGGCCG	1 cut(s)	407
Eam1104I	CTCTTC	5 cut(s)	38, 428, 664, 713, 969
EarI	CTCTTC	5 cut(s)	38, 428, 664, 713, 969
EciI	GGCGGA	2 cut(s)	76, 82
EclXI	CGGCCG	1 cut(s)	407
Eco130I	CCWWGG	3 cut(s)	441, 1044, 1662
Eco32I	GATATC	1 cut(s)	1338
Eco47I	GGWCC	2 cut(s)	414, 1208
Eco52I	CGGCCG	1 cut(s)	407
Eco57I	CTGAAG	2 cut(s)	969, 993
EcoRI	GAATTC	1 cut(s)	1448
EcoRV	GATATC	1 cut(s)	1338
EcoT14I	CCWWGG	3 cut(s)	441, 1044, 1662
EcoT22I	ATGCAT	1 cut(s)	1113
EgeI	GGCGCC	1 cut(s)	498
EheI	GGCGCC	1 cut(s)	498
ErhI	CCWWGG	3 cut(s)	441, 1044, 1662
Esp3I	CGTCTC	2 cut(s)	329, 715
FaeI	CATG	3 cut(s)	1067, 1115, 1709
FaqI	GGGAC	3 cut(s)	452, 1213, 1221
FatI	CATG	3 cut(s)	1063, 1111, 1705
FauI	CCCGC	5 cut(s)	132, 477, 498, 513, 570
FblI	GTMKAC	2 cut(s)	1035, 1611
FokI	GGATG	2 cut(s)	1120, 1310
FspBI	CTAG	2 cut(s)	1311, 1400
GlaI	GCGC	9 cut(s)	259, 304, 306, 390, 426, 439, 498, 557, 1525
HaeII	RGCGCY	4 cut(s)	428, 441, 500, 559
HaeIII	GGCC	6 cut(s)	182, 282, 409, 537, 1469, 1560
HgaI	GACGC	4 cut(s)	223, 346, 691, 732
HhaI	GCGC	9 cut(s)	260, 305, 307, 391, 427, 440, 499, 558, 1526
Hin1I	GRCGYC	3 cut(s)	234, 338, 497
Hin1II	CATG	3 cut(s)	1067, 1115, 1709
Hin6I	GCGC	9 cut(s)	258, 303, 305, 389, 425, 438, 497, 556, 1524
HinP1I	GCGC	9 cut(s)	258, 303, 305, 389, 425, 438, 497, 556, 1524
HincII	GTYRAC	1 cut(s)	1096
HindII	GTYRAC	1 cut(s)	1096
HindIII	AAGCTT	1 cut(s)	1142
HinfI	GANTC	7 cut(s)	361, 479, 586, 999, 1307, 1580, 1652
HphI	GGTGA	3 cut(s)	232, 628, 1647
Hpy166II	GTNNAC	5 cut(s)	414, 1036, 1096, 1166, 1612
Hpy188I	TCNGA	6 cut(s)	334, 646, 668, 1252, 1261, 1554
Hpy188III	TCNNGA	6 cut(s)	365, 947, 1363, 1421, 1432, 1706
Hpy8I	GTNNAC	5 cut(s)	414, 1036, 1096, 1166, 1612
Hpy99I	CGWCG	3 cut(s)	233, 251, 266
HpyAV	CCTTC	4 cut(s)	944, 1067, 1432, 1448
HpyCH4III	ACNGT	3 cut(s)	763, 1333, 1589
HpyCH4V	TGCA	3 cut(s)	1101, 1111, 1115
HpyF10VI	GCNNNNNNNGC	8 cut(s)	11, 279, 388, 400, 604, 1512, 1521, 1566
HpyF3I	CTNAG	2 cut(s)	1140, 1551
Hsp92I	GRCGYC	3 cut(s)	234, 338, 497
Hsp92II	CATG	3 cut(s)	1067, 1115, 1709
HspAI	GCGC	9 cut(s)	258, 303, 305, 389, 425, 438, 497, 556, 1524
KasI	GGCGCC	1 cut(s)	496
KroI	GCCGGC	3 cut(s)	370, 493, 651
KroNI	GCCGGC	3 cut(s)	372, 495, 653
KspI	CCGCGG	1 cut(s)	407
Kzo9I	GATC	6 cut(s)	105, 132, 813, 933, 1417, 1702
LguI	GCTCTTC	1 cut(s)	428
LmnI	GCTCC	5 cut(s)	163, 300, 634, 919, 949
Lsp1109I	GCAGC	3 cut(s)	142, 898, 1533
LweI	GCATC	5 cut(s)	23, 885, 1098, 1414, 1624
MaeI	CTAG	2 cut(s)	1311, 1400
MalI	GATC	6 cut(s)	107, 134, 815, 935, 1419, 1704
MbiI	CCGCTC	1 cut(s)	472
MboI	GATC	6 cut(s)	105, 132, 813, 933, 1417, 1702
MfeI	CAATTG	1 cut(s)	1374
MhlI	GDGCHC	1 cut(s)	1479
MluCI	AATT	4 cut(s)	111, 1151, 1374, 1448
Mly113I	GGCGCC	1 cut(s)	497
MlyI	GAGTC	3 cut(s)	473, 993, 1574
MmeI	TCCRAC	2 cut(s)	675, 782
Mph1103I	ATGCAT	1 cut(s)	1113
MreI	CGCCGGCG	1 cut(s)	493
MroNI	GCCGGC	3 cut(s)	370, 493, 651
MroXI	GAANNNNTTC	2 cut(s)	1155, 1545
MseI	TTAA	5 cut(s)	456, 486, 1146, 1293, 1493
MslI	CAYNNNNRTG	1 cut(s)	1116
MspA1I	CMGCKG	2 cut(s)	406, 911
MspCI	CTTAAG	1 cut(s)	1145
MspR9I	CCNGG	5 cut(s)	179, 300, 501, 534, 567
MunI	CAATTG	1 cut(s)	1374
MvnI	CGCG	7 cut(s)	228, 258, 305, 366, 389, 406, 577
MwoI	GCNNNNNNNGC	8 cut(s)	11, 279, 388, 400, 604, 1512, 1521, 1566
NaeI	GCCGGC	3 cut(s)	372, 495, 653
NarI	GGCGCC	1 cut(s)	497
NciI	CCSGG	5 cut(s)	179, 300, 501, 534, 567
NdeII	GATC	6 cut(s)	105, 132, 813, 933, 1417, 1702
NgoMIV	GCCGGC	3 cut(s)	370, 493, 651
NlaIII	CATG	3 cut(s)	1067, 1115, 1709
NlaIV	GGNNCC	7 cut(s)	498, 505, 945, 1158, 1209, 1239, 1516
NmeAIII	GCCGAG	1 cut(s)	570
NruI	TCGCGA	1 cut(s)	366
NsiI	ATGCAT	1 cut(s)	1113
NspI	RCATGY	2 cut(s)	1067, 1115
NspV	TTCGAA	1 cut(s)	1452
PaeI	GCATGC	2 cut(s)	1067, 1115
PagI	TCATGA	1 cut(s)	1705
PalAI	GGCGCGCC	1 cut(s)	303
PauI	GCGCGC	1 cut(s)	303
PciSI	GCTCTTC	1 cut(s)	428
PcsI	WCGNNNNNNNCGW	1 cut(s)	270
PdiI	GCCGGC	3 cut(s)	372, 495, 653
PdmI	GAANNNNTTC	2 cut(s)	1155, 1545
PfeI	GAWTC	4 cut(s)	361, 586, 1307, 1652
PflFI	GACNNNGTC	1 cut(s)	233
PleI	GAGTC	3 cut(s)	473, 993, 1574
PluTI	GGCGCC	1 cut(s)	500
PpsI	GAGTC	3 cut(s)	473, 993, 1574
PshBI	ATTAAT	1 cut(s)	1493
PspN4I	GGNNCC	7 cut(s)	498, 505, 945, 1158, 1209, 1239, 1516
PspPI	GGNCC	5 cut(s)	181, 414, 536, 1208, 1559
PsyI	GACNNNGTC	1 cut(s)	233
PteI	GCGCGC	1 cut(s)	303
PvuII	CAGCTG	1 cut(s)	911
RruI	TCGCGA	1 cut(s)	366
RsaI	GTAC	5 cut(s)	290, 323, 1015, 1167, 1586
RsaNI	GTAC	5 cut(s)	289, 322, 1014, 1166, 1585
RseI	CAYNNNNRTG	1 cut(s)	1116
SacII	CCGCGG	1 cut(s)	407
SapI	GCTCTTC	1 cut(s)	428
SaqAI	TTAA	5 cut(s)	456, 486, 1146, 1293, 1493
Sau3AI	GATC	6 cut(s)	105, 132, 813, 933, 1417, 1702
Sau96I	GGNCC	5 cut(s)	181, 414, 536, 1208, 1559
SchI	GAGTC	3 cut(s)	473, 993, 1574
ScrFI	CCNGG	5 cut(s)	179, 300, 501, 534, 567
SduI	GDGCHC	1 cut(s)	1479
SfaNI	GCATC	5 cut(s)	23, 885, 1098, 1414, 1624
SfoI	GGCGCC	1 cut(s)	498
Sfr303I	CCGCGG	1 cut(s)	407
SfuI	TTCGAA	1 cut(s)	1452
SgrAI	CRCCGGYG	1 cut(s)	493
SgrBI	CCGCGG	1 cut(s)	407
SgsI	GGCGCGCC	1 cut(s)	303
SinI	GGWCC	2 cut(s)	414, 1208
SmiMI	CAYNNNNRTG	1 cut(s)	1116
SmlI	CTYRAG	2 cut(s)	1145, 1501
SmoI	CTYRAG	2 cut(s)	1145, 1501
SphI	GCATGC	2 cut(s)	1067, 1115
Sse9I	AATT	4 cut(s)	111, 1151, 1374, 1448
SspDI	GGCGCC	1 cut(s)	496
SspMI	CTAG	2 cut(s)	1311, 1400
StyD4I	CCNGG	5 cut(s)	177, 298, 499, 532, 565
StyI	CCWWGG	3 cut(s)	441, 1044, 1662
TaaI	ACNGT	3 cut(s)	763, 1333, 1589
TaqI	TCGA	5 cut(s)	312, 525, 823, 1452, 1701
TasI	AATT	4 cut(s)	111, 1151, 1374, 1448
TatI	WGTACW	3 cut(s)	321, 1013, 1165
TauI	GCSGC	7 cut(s)	103, 130, 204, 394, 406, 409, 786
TfiI	GAWTC	4 cut(s)	361, 586, 1307, 1652
Tru1I	TTAA	5 cut(s)	456, 486, 1146, 1293, 1493
Tru9I	TTAA	5 cut(s)	456, 486, 1146, 1293, 1493
TscAI	CASTG	3 cut(s)	897, 1338, 1594
TseI	GCWGC	3 cut(s)	155, 911, 1521
TspDTI	ATGAA	5 cut(s)	809, 981, 1200, 1419, 1554
TspRI	CASTG	3 cut(s)	897, 1338, 1594
Tth111I	GACNNNGTC	1 cut(s)	233
Vha464I	CTTAAG	1 cut(s)	1145
VpaK11BI	GGWCC	2 cut(s)	414, 1208
VspI	ATTAAT	1 cut(s)	1493
XapI	RAATTY	1 cut(s)	1448
XceI	RCATGY	2 cut(s)	1067, 1115
XcmI	CCANNNNNNNNNTGG	1 cut(s)	897
XmiI	GTMKAC	2 cut(s)	1035, 1611
XmnI	GAANNNNTTC	2 cut(s)	1155, 1545
XspI	CTAG	2 cut(s)	1311, 1400
Zsp2I	ATGCAT	1 cut(s)	1113

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.