Prupe.4G193400_v2.0.a1

Serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0001151
Physical Location & Seq
Forward (+)
11645194 .. 11646427
1234 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G193400.1

Sequence Viewer

Length: 1191 bp
ATGAAAGGCCTTGCATTAATCCTCTCTACCTCTCTACTCCAATTTTTAGTCTTACAATTGTCCAGAGCAGCTGATACAATCTCTGCAGCACAATCCATCACCAGCACTAATACCTTGGTTTCTTCCGGCCAACGCTTCGAATTAGGAATCTTCTCCGCGGTCAATTCAGAGGCCTGGTATTTAGGAATATGGTACAAGAACTTTCCAAATATTGTTGTATGGGTTGCCAACAGAGAAAATCCAGTTGCAGATTCACATGGATCCTTGAAATTATCCAAAAATGGAAGTCTTGTCCTTTTAGACCAAATGAACAATACTATTTGGTCTTCCACTTCTTCCCGAGTAGCAGAAGACCCTGTCGCACAACTTTTGGAGAATGGAAACATGGTTGTCAGAGAAAAGGCTGCAACAGATTCAGAAAGCTACATATGGGAAAGTTTCAATTTCCCATCAGACACTCTGCTACCAGAAATGAAGTTGGGGTGGAACTTCAGGACAGGCCTTAACAGATTCTTTACTTCTTGGAAAAATGCTAGCGACCCTTCTCCGGGAGAATATACTTATGGGATGGATAATGTTCTGTTGCCCCAGCTTGTTATTGCCAAAGGATCAAAGAAAATGTTCCGAACCGGACCTTGGAACGGTCTTTGGTTTACTGGTACTCCTGGTTTAGCAGCTACATACAGATCGGTCGTGAAACCAATATTTGTGTATGATACCAATGAGTTGTACTATTCATATGAGTCTTTTAATAGTTCCACCATCACAAGATTGAAGCTCAGTGAATCGGGTTTGATCCAGCGGCTAGTGGTCACCGAAGGAAGCACTGAATGGGCTGTCATGTATACTTTGCAGAATGATGAGTGTAATAGTTATGGACAGTGTGGAGCAAATGGCATTTGCAGAATTAGTAAATCACCCATTTTGCTGAATTGGACAAATGGGTGTATCAGGGAGACACCACTGAGTTGCCAGAAAGGAGAAGGGTTTTTGAAAGTTCGAAATGTGAAGCTGCCAGACCAGTTGAATTTTTTGGTCAACAATAGCAATAGTAACAACGGATGTGAAGCAGAGTGCTTAAAGAATTGTTCTTGTGTAGCTTATGCTAATACAGTTATCATTAATGGAGGCAGCAGCTGTTTGATGTGGTTTGGCGACCTAGTTGATCTGCGAGAATTCGTTGAAGAAGAT
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

397

Amino Acids

44.1

Weight (kDa)

5.25

Isoelectric Point (pI)

27.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 845
AccII CGCG 1 cut(s) 158
AciI CCGC 3 cut(s) 156, 158, 802
AclWI GGATC 4 cut(s) 255, 268, 616, 790
AcoI YGGCCR 1 cut(s) 127
AcsI RAATTY 2 cut(s) 1027, 1175
AcuI CTGAAG 1 cut(s) 475
AfaI GTAC 3 cut(s) 194, 661, 731
AfiI CCNNNNNNNGG 4 cut(s) 547, 548, 636, 641
AgsI TTSAA 6 cut(s) 268, 442, 775, 994, 1027, 1184
AjnI CCWGG 2 cut(s) 173, 664
AjuI GAANNNNNNNTTGG 2 cut(s) 619, 651
AluBI AGCT 8 cut(s) 71, 423, 592, 677, 778, 1012, 1100, 1137
AluI AGCT 8 cut(s) 71, 423, 592, 677, 778, 1012, 1100, 1137
Alw26I GTCTC 1 cut(s) 950
AlwI GGATC 4 cut(s) 255, 268, 616, 790
AlwNI CAGNNNCTG 1 cut(s) 1137
Ama87I CYCGRG 1 cut(s) 339
AoxI GGCC 4 cut(s) 7, 127, 171, 499
ApeKI GCWGC 7 cut(s) 68, 86, 404, 674, 1012, 1131, 1134
ApoI RAATTY 2 cut(s) 1027, 1175
AseI ATTAAT 2 cut(s) 17, 1122
Asp700I GAANNNNTTC 1 cut(s) 620
AspS9I GGNCC 1 cut(s) 632
AsuC2I CCSGG 1 cut(s) 549
AsuHPI GGTGA 3 cut(s) 91, 805, 909
AsuII TTCGAA 2 cut(s) 138, 1000
AsuNHI GCTAGC 1 cut(s) 533
AvaI CYCGRG 1 cut(s) 339
AvaII GGWCC 1 cut(s) 632
BamHI GGATCC 1 cut(s) 260
BbsI GAAGAC 2 cut(s) 318, 357
BbvI GCAGC 7 cut(s) 80, 98, 391, 686, 999, 1143, 1146
BccI CCATC 4 cut(s) 104, 457, 562, 770
BciT130I CCWGG 2 cut(s) 175, 666
BcnI CCSGG 1 cut(s) 549
BcoDI GTCTC 1 cut(s) 950
BfaI CTAG 3 cut(s) 534, 806, 1160
BfmI CTRYAG 1 cut(s) 84
BisI GCNGC 8 cut(s) 69, 87, 405, 675, 803, 1013, 1132, 1135
BlsI GCNGC 8 cut(s) 70, 88, 406, 676, 804, 1014, 1133, 1136
Bme1390I CCNGG 3 cut(s) 175, 549, 666
Bme18I GGWCC 1 cut(s) 632
BmeT110I CYCGRG 1 cut(s) 339
BmgT120I GGNCC 1 cut(s) 632
BmiI GGNNCC 1 cut(s) 262
BmrFI CCNGG 3 cut(s) 175, 549, 666
BmtI GCTAGC 1 cut(s) 537
BpiI GAAGAC 2 cut(s) 318, 357
Bpu14I TTCGAA 2 cut(s) 138, 1000
BpuMI CCSGG 1 cut(s) 549
BsaJI CCNNGG 3 cut(s) 114, 156, 635
BsaWI WCCGGW 1 cut(s) 629
BsaXI ACNNNNNCTCC 2 cut(s) 646, 676
Bsc4I CCNNNNNNNGG 4 cut(s) 547, 548, 636, 641
Bse1I ACTGG 3 cut(s) 242, 661, 1021
BseBI CCWGG 2 cut(s) 175, 666
BseDI CCNNGG 3 cut(s) 114, 156, 635
BseGI GGATG 2 cut(s) 573, 1067
BseLI CCNNNNNNNGG 4 cut(s) 547, 548, 636, 641
BseMII CTCAG 2 cut(s) 793, 956
BseNI ACTGG 3 cut(s) 242, 661, 1021
BseXI GCAGC 7 cut(s) 80, 98, 391, 686, 999, 1143, 1146
BseYI CCCAGC 1 cut(s) 588
Bsh1236I CGCG 1 cut(s) 158
Bsh1285I CGRYCG 1 cut(s) 693
BshFI GGCC 4 cut(s) 9, 129, 173, 501
BsiEI CGRYCG 1 cut(s) 693
BsiHKCI CYCGRG 1 cut(s) 339
BsiSI CCGG 3 cut(s) 126, 548, 630
BslI CCNNNNNNNGG 4 cut(s) 547, 548, 636, 641
BsmAI GTCTC 1 cut(s) 950
BsnI GGCC 4 cut(s) 9, 129, 173, 501
BsoBI CYCGRG 1 cut(s) 339
Bsp119I TTCGAA 2 cut(s) 138, 1000
Bsp143I GATC 5 cut(s) 260, 608, 686, 795, 1165
BspACI CCGC 3 cut(s) 156, 158, 802
BspANI GGCC 4 cut(s) 9, 129, 173, 501
BspCNI CTCAG 2 cut(s) 792, 957
BspFNI CGCG 1 cut(s) 158
BspLI GGNNCC 1 cut(s) 262
BspMAI CTGCAG 1 cut(s) 88
BspOI GCTAGC 1 cut(s) 537
BspPI GGATC 4 cut(s) 255, 268, 616, 790
BspT104I TTCGAA 2 cut(s) 138, 1000
BsrI ACTGG 3 cut(s) 242, 661, 1021
BssECI CCNNGG 3 cut(s) 114, 156, 635
BssMI GATC 5 cut(s) 260, 608, 686, 795, 1165
BssNAI GTATAC 1 cut(s) 846
BssT1I CCWWGG 2 cut(s) 114, 635
Bst1107I GTATAC 1 cut(s) 846
Bst2UI CCWGG 2 cut(s) 175, 666
Bst4CI ACNGT 3 cut(s) 644, 882, 1114
BstBI TTCGAA 2 cut(s) 138, 1000
BstC8I GCNNGC 1 cut(s) 535
BstDEI CTNAG 2 cut(s) 779, 965
BstDSI CCRYGG 1 cut(s) 156
BstEII GGTNACC 1 cut(s) 811
BstF5I GGATG 2 cut(s) 573, 1067
BstFNI CGCG 1 cut(s) 158
BstKTI GATC 5 cut(s) 263, 611, 689, 798, 1168
BstMAI GTCTC 1 cut(s) 950
BstMBI GATC 5 cut(s) 260, 608, 686, 795, 1165
BstMCI CGRYCG 1 cut(s) 693
BstNI CCWGG 2 cut(s) 175, 666
BstPI GGTNACC 1 cut(s) 811
BstSCI CCNGG 3 cut(s) 173, 547, 664
BstSFI CTRYAG 1 cut(s) 84
BstUI CGCG 1 cut(s) 158
BstV1I GCAGC 7 cut(s) 80, 98, 391, 686, 999, 1143, 1146
BstV2I GAAGAC 2 cut(s) 318, 357
BstX2I RGATCY 1 cut(s) 260
BstYI RGATCY 1 cut(s) 260
BstZ17I GTATAC 1 cut(s) 846
BsuRI GGCC 4 cut(s) 9, 129, 173, 501
BtgI CCRYGG 1 cut(s) 156
BtsCI GGATG 2 cut(s) 573, 1067
BtsIMutI CAGTG 4 cut(s) 787, 825, 887, 962
Cac8I GCNNGC 1 cut(s) 535
CaiI CAGNNNCTG 1 cut(s) 1137
Cfr13I GGNCC 1 cut(s) 632
Cfr42I CCGCGG 1 cut(s) 159
Csp6I GTAC 3 cut(s) 193, 660, 730
CviAII CATG 3 cut(s) 257, 385, 841
CviQI GTAC 3 cut(s) 193, 660, 730
DdeI CTNAG 2 cut(s) 779, 965
DpnI GATC 5 cut(s) 262, 610, 688, 797, 1167
DpnII GATC 5 cut(s) 260, 608, 686, 795, 1165
EaeI YGGCCR 1 cut(s) 127
Eco130I CCWWGG 2 cut(s) 114, 635
Eco147I AGGCCT 3 cut(s) 9, 173, 501
Eco47I GGWCC 1 cut(s) 632
Eco57I CTGAAG 1 cut(s) 475
Eco88I CYCGRG 1 cut(s) 339
Eco91I GGTNACC 1 cut(s) 811
EcoO65I GGTNACC 1 cut(s) 811
EcoRI GAATTC 1 cut(s) 1175
EcoRII CCWGG 2 cut(s) 173, 664
EcoT14I CCWWGG 2 cut(s) 114, 635
ErhI CCWWGG 2 cut(s) 114, 635
FaeI CATG 3 cut(s) 260, 388, 844
FatI CATG 3 cut(s) 256, 384, 840
FauNDI CATATG 2 cut(s) 428, 739
FblI GTMKAC 1 cut(s) 845
Fnu4HI GCNGC 8 cut(s) 69, 87, 405, 675, 803, 1013, 1132, 1135
FokI GGATG 2 cut(s) 580, 1074
Fsp4HI GCNGC 8 cut(s) 69, 87, 405, 675, 803, 1013, 1132, 1135
FspBI CTAG 3 cut(s) 534, 806, 1160
GluI GCNGC 8 cut(s) 69, 87, 405, 675, 803, 1013, 1132, 1135
GsaI CCCAGC 1 cut(s) 592
HaeIII GGCC 4 cut(s) 9, 129, 173, 501
HapII CCGG 3 cut(s) 126, 548, 630
Hin1II CATG 3 cut(s) 260, 388, 844
HincII GTYRAC 1 cut(s) 1039
HindII GTYRAC 1 cut(s) 1039
HinfI GANTC 6 cut(s) 147, 251, 413, 510, 743, 785
HpaII CCGG 3 cut(s) 126, 548, 630
HphI GGTGA 3 cut(s) 91, 805, 909
Hpy166II GTNNAC 3 cut(s) 654, 846, 1039
Hpy188I TCNGA 5 cut(s) 169, 395, 418, 454, 626
Hpy188III TCNNGA 4 cut(s) 63, 339, 493, 694
Hpy8I GTNNAC 3 cut(s) 654, 846, 1039
HpyAV CCTTC 3 cut(s) 552, 812, 977
HpyCH4III ACNGT 3 cut(s) 644, 882, 1114
HpyCH4V TGCA 6 cut(s) 14, 86, 248, 407, 853, 903
HpyF3I CTNAG 2 cut(s) 779, 965
Hsp92II CATG 3 cut(s) 260, 388, 844
KspI CCGCGG 1 cut(s) 159
Kzo9I GATC 5 cut(s) 260, 608, 686, 795, 1165
LmnI GCTCC 1 cut(s) 887
Lsp1109I GCAGC 7 cut(s) 80, 98, 391, 686, 999, 1143, 1146
MaeI CTAG 3 cut(s) 534, 806, 1160
MaeIII GTNAC 2 cut(s) 811, 1052
MalI GATC 5 cut(s) 262, 610, 688, 797, 1167
MboI GATC 5 cut(s) 260, 608, 686, 795, 1165
MboII GAAGA 5 cut(s) 114, 142, 318, 327, 362
MfeI CAATTG 1 cut(s) 56
MflI RGATCY 1 cut(s) 260
MlyI GAGTC 1 cut(s) 752
MnlI CCTC 4 cut(s) 32, 40, 163, 1121
MroXI GAANNNNTTC 1 cut(s) 620
MseI TTAA 5 cut(s) 17, 504, 750, 1079, 1122
MspA1I CMGCKG 4 cut(s) 71, 158, 802, 1137
MspI CCGG 3 cut(s) 126, 548, 630
MspR9I CCNGG 3 cut(s) 175, 549, 666
MunI CAATTG 1 cut(s) 56
MvaI CCWGG 2 cut(s) 175, 666
MvnI CGCG 1 cut(s) 158
NciI CCSGG 1 cut(s) 549
NdeI CATATG 2 cut(s) 428, 739
NdeII GATC 5 cut(s) 260, 608, 686, 795, 1165
NheI GCTAGC 1 cut(s) 533
NlaIII CATG 3 cut(s) 260, 388, 844
NlaIV GGNNCC 1 cut(s) 262
NmuCI GTSAC 1 cut(s) 811
NspV TTCGAA 2 cut(s) 138, 1000
PceI AGGCCT 3 cut(s) 9, 173, 501
PdmI GAANNNNTTC 1 cut(s) 620
PfeI GAWTC 5 cut(s) 147, 251, 413, 510, 785
PflFI GACNNNGTC 1 cut(s) 356
PfoI TCCNGGA 1 cut(s) 547
PkrI GCNGC 8 cut(s) 70, 88, 406, 676, 804, 1014, 1133, 1136
PleI GAGTC 1 cut(s) 751
PpsI GAGTC 1 cut(s) 751
PshBI ATTAAT 2 cut(s) 17, 1122
Psp6I CCWGG 2 cut(s) 173, 664
PspEI GGTNACC 1 cut(s) 811
PspFI CCCAGC 1 cut(s) 588
PspGI CCWGG 2 cut(s) 173, 664
PspN4I GGNNCC 1 cut(s) 262
PspPI GGNCC 1 cut(s) 632
PstI CTGCAG 1 cut(s) 88
PstNI CAGNNNCTG 1 cut(s) 1137
PsuI RGATCY 1 cut(s) 260
PsyI GACNNNGTC 1 cut(s) 356
PvuII CAGCTG 2 cut(s) 71, 1137
RsaI GTAC 3 cut(s) 194, 661, 731
RsaNI GTAC 3 cut(s) 193, 660, 730
SacII CCGCGG 1 cut(s) 159
SaqAI TTAA 5 cut(s) 17, 504, 750, 1079, 1122
SatI GCNGC 8 cut(s) 69, 87, 405, 675, 803, 1013, 1132, 1135
Sau3AI GATC 5 cut(s) 260, 608, 686, 795, 1165
Sau96I GGNCC 1 cut(s) 632
SchI GAGTC 1 cut(s) 752
ScrFI CCNGG 3 cut(s) 175, 549, 666
SfcI CTRYAG 1 cut(s) 84
Sfr303I CCGCGG 1 cut(s) 159
SfuI TTCGAA 2 cut(s) 138, 1000
SgrBI CCGCGG 1 cut(s) 159
SinI GGWCC 1 cut(s) 632
SseBI AGGCCT 3 cut(s) 9, 173, 501
SsiI CCGC 3 cut(s) 156, 158, 802
SspI AATATT 2 cut(s) 211, 705
SspMI CTAG 3 cut(s) 534, 806, 1160
StuI AGGCCT 3 cut(s) 9, 173, 501
StyD4I CCNGG 3 cut(s) 173, 547, 664
StyI CCWWGG 2 cut(s) 114, 635
TaaI ACNGT 3 cut(s) 644, 882, 1114
TaqI TCGA 2 cut(s) 138, 1000
TaqII GACCGA 1 cut(s) 679
TatI WGTACW 1 cut(s) 729
TauI GCSGC 1 cut(s) 805
TfiI GAWTC 5 cut(s) 147, 251, 413, 510, 785
Tru1I TTAA 5 cut(s) 17, 504, 750, 1079, 1122
Tru9I TTAA 5 cut(s) 17, 504, 750, 1079, 1122
TscAI CASTG 4 cut(s) 787, 832, 887, 969
TseFI GTSAC 1 cut(s) 811
TseI GCWGC 7 cut(s) 68, 86, 404, 674, 1012, 1131, 1134
Tsp45I GTSAC 1 cut(s) 811
TspDTI ATGAA 4 cut(s) 17, 323, 488, 726
TspGWI ACGGA 1 cut(s) 1074
TspRI CASTG 4 cut(s) 787, 832, 887, 969
Tth111I GACNNNGTC 1 cut(s) 356
VpaK11BI GGWCC 1 cut(s) 632
VspI ATTAAT 2 cut(s) 17, 1122
XapI RAATTY 2 cut(s) 1027, 1175
XmiI GTMKAC 1 cut(s) 845
XmnI GAANNNNTTC 1 cut(s) 620
XspI CTAG 3 cut(s) 534, 806, 1160
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.