Prupe.6G034700_v2.0.a1

No description available

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Forward (+)
2622550 .. 2623190
641 bp
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UTR
Exon/CDS
Intron
Prupe.6G034700.1

Sequence Viewer

Length: 384 bp
ATGGCAACAGCTATTCGGTCTGCGGTTGGAAAGTTGGGGAGTAAATATTCTTCACGTTGTCATAGCAATGGAAGAATAGTAGCAAACATGGTTAGGGTTGGGGATTTTCAAATTAGGAGCGCAGTAGTCAACAACTACAATATTGATCGTGATGTCTTGTTTTCAACTTCAAAGCCTCCTTCTTCTTATGGTTATTCCTCTCGCCATCCTTTTCTTTTTGGCAACTATCACAAGAAACCTCCGCCTGTTCTTCATCTGCAATATGATTCCGATTTTGAAGAGCCATGTGGTGGATTTACTCCATGTCCCTGTTTTATTGATGATCCTGATACTATATCTCCTACCCGTTTCGCCGTGAAAGAGTATAACAAGCAAAAGGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

128

Amino Acids

14.24

Weight (kDa)

9.12

Isoelectric Point (pI)

49.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 290
AciI CCGC 2 cut(s) 23, 242
AclWI GGATC 1 cut(s) 317
AfiI CCNNNNNNNGG 1 cut(s) 290
AgsI TTSAA 4 cut(s) 110, 165, 171, 278
AluBI AGCT 1 cut(s) 11
AluI AGCT 1 cut(s) 11
AlwI GGATC 1 cut(s) 317
AspLEI GCGC 1 cut(s) 122
BarI GAAGNNNNNNTAC 2 cut(s) 34, 66
BccI CCATC 1 cut(s) 213
BceAI ACGGC 1 cut(s) 338
BsaXI ACNNNNNCTCC 2 cut(s) 322, 352
Bsc4I CCNNNNNNNGG 1 cut(s) 290
Bse3DI GCAATG 1 cut(s) 73
BseGI GGATG 1 cut(s) 205
BseLI CCNNNNNNNGG 1 cut(s) 290
BseMI GCAATG 1 cut(s) 73
BslFI GGGAC 1 cut(s) 291
BslI CCNNNNNNNGG 1 cut(s) 290
BsmFI GGGAC 1 cut(s) 291
Bsp143I GATC 2 cut(s) 145, 322
BspACI CCGC 2 cut(s) 23, 242
BspPI GGATC 1 cut(s) 317
BspQI GCTCTTC 1 cut(s) 273
BsrDI GCAATG 1 cut(s) 73
BssMI GATC 2 cut(s) 145, 322
Bst6I CTCTTC 1 cut(s) 273
BstF5I GGATG 1 cut(s) 205
BstHHI GCGC 1 cut(s) 122
BstKTI GATC 2 cut(s) 148, 325
BstMBI GATC 2 cut(s) 145, 322
BtsCI GGATG 1 cut(s) 205
CfoI GCGC 1 cut(s) 122
CviAII CATG 3 cut(s) 88, 285, 303
CviJI RGCY 3 cut(s) 11, 175, 283
CviKI_1 RGCY 3 cut(s) 11, 175, 283
DpnI GATC 2 cut(s) 147, 324
DpnII GATC 2 cut(s) 145, 322
Eam1104I CTCTTC 1 cut(s) 273
EarI CTCTTC 1 cut(s) 273
EciI GGCGGA 1 cut(s) 231
FaeI CATG 3 cut(s) 91, 288, 306
FaiI YATR 8 cut(s) 63, 89, 189, 264, 286, 304, 335, 366
FaqI GGGAC 1 cut(s) 291
FatI CATG 3 cut(s) 87, 284, 302
FokI GGATG 1 cut(s) 192
GlaI GCGC 1 cut(s) 121
HhaI GCGC 1 cut(s) 122
Hin1II CATG 3 cut(s) 91, 288, 306
Hin6I GCGC 1 cut(s) 120
HinP1I GCGC 1 cut(s) 120
HincII GTYRAC 1 cut(s) 130
HindII GTYRAC 1 cut(s) 130
HinfI GANTC 1 cut(s) 266
Hpy166II GTNNAC 1 cut(s) 130
Hpy188I TCNGA 1 cut(s) 271
Hpy188III TCNNGA 2 cut(s) 149, 326
Hpy8I GTNNAC 1 cut(s) 130
HpyAV CCTTC 1 cut(s) 189
HpyCH4IV ACGT 1 cut(s) 55
HpyCH4V TGCA 1 cut(s) 259
HpySE526I ACGT 1 cut(s) 55
Hsp92II CATG 3 cut(s) 91, 288, 306
HspAI GCGC 1 cut(s) 120
Kzo9I GATC 2 cut(s) 145, 322
LguI GCTCTTC 1 cut(s) 273
LmnI GCTCC 1 cut(s) 117
LpnPI CCDG 3 cut(s) 258, 322, 339
MaeII ACGT 1 cut(s) 55
MalI GATC 2 cut(s) 147, 324
MboI GATC 2 cut(s) 145, 322
MboII GAAGA 5 cut(s) 42, 84, 174, 242, 290
MluCI AATT 1 cut(s) 111
MmeI TCCRAC 1 cut(s) 7
MnlI CCTC 3 cut(s) 186, 208, 249
MslI CAYNNNNRTG 1 cut(s) 66
NdeII GATC 2 cut(s) 145, 322
NlaIII CATG 3 cut(s) 91, 288, 306
PciSI GCTCTTC 1 cut(s) 273
PfeI GAWTC 1 cut(s) 266
PflMI CCANNNNNTGG 1 cut(s) 290
RseI CAYNNNNRTG 1 cut(s) 66
SapI GCTCTTC 1 cut(s) 273
Sau3AI GATC 2 cut(s) 145, 322
SetI ASST 4 cut(s) 13, 58, 241, 381
SmiMI CAYNNNNRTG 1 cut(s) 66
Sse9I AATT 1 cut(s) 111
SsiI CCGC 2 cut(s) 23, 242
SspI AATATT 2 cut(s) 47, 142
TaiI ACGT 1 cut(s) 58
TaqII GACCGA 1 cut(s) 6
TasI AATT 1 cut(s) 111
TfiI GAWTC 1 cut(s) 266
TspDTI ATGAA 1 cut(s) 242
Van91I CCANNNNNTGG 1 cut(s) 290
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.