Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0001212

Physical Location & Seq

Genomic Coordinates Forward (+)

8113297 .. 8114772

Gene Structure 1476 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G044900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 405 bp

AACAAGATTTGTAATTGTGACCGGTTCCCTTCAACGGAAGGTCAAGGCGGTGCGTTTCGAGCCCTGAAACTCACCTGGCTCGTTGAGTTTCAGTGCAAAACCCTAGAACGACTCAAATCGCACGCAGAGAACTCACCACTCCAAATTGCTGGGAGATTGTGTGACAATCTACTCACCTGTGTTGTACGAGCATGGGACTACTACAGCAAGCCTTTCTTTGTTGCACCAGCCATGAGCACCTTGATGTGGAAGAATCGCTTCACGGAGGGACATATCATGTCAACTGGTGAACTTGGAGTGTCACTCACCCCTCCTGTCACAAGGAGGCTGGCTTGTGGGGATTACGGGAATGGAGCAATTGCTGAACCCTCTTTGATTTATTATACTGTAAGACTCTTTTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0004633 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006163 GO:0006164 GO:0006725 GO:0006732 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0006972 GO:0008150 GO:0008152 GO:0009058 GO:0009108 GO:0009117 GO:0009150 GO:0009152 GO:0009165 GO:0009259 GO:0009260 GO:0009628 GO:0009651 GO:0009987 GO:0010181 GO:0015936 GO:0015937 GO:0016829 GO:0016830 GO:0016831 GO:0018130 GO:0019438 GO:0019637 GO:0019693 GO:0032553 GO:0033865 GO:0033866 GO:0033875 GO:0034030 GO:0034032 GO:0034033 GO:0034641 GO:0034654 GO:0036094 GO:0042538 GO:0043167 GO:0043168 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046390 GO:0046483 GO:0048037 GO:0050662 GO:0050896 GO:0051186 GO:0051188 GO:0055086 GO:0071704 GO:0072521 GO:0072522 GO:0090407 GO:0097159 GO:0097367 GO:1901135 GO:1901137 GO:1901265 GO:1901293 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00770 ko01100 map00770 map01100

Pfam Domains

Protein Families

Flavoprotein

Protein Analysis

135

Amino Acids

15.09

Weight (kDa)

8.81

Isoelectric Point (pI)

44.92

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001212)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G48605 AT3G18030
fragaria_vesca	FvH4_5g07250 FvH4_5g07250 FvH4_5g07250
malus_domestica	MD06G1157900.v1.1 MD14G1015700.v1.1 MD14G1164500.v1.1
prunus_persica	Prupe.5G158000_v2.0.a1 Prupe.5G158000_v2.0.a1 Prupe.7G044900_v2.0.a1 Prupe.7G117800_v2.0.a1 Prupe.7G117900_v2.0.a1
pyrus_communis	pycom06g14100 pycom14g01340 pycom14g13720
rosa_chinensis	RchiOBHm_Chr3g0460241 RchiOBHm_Chr3g0460251 RchiOBHm_Chr4g0419061 RchiOBHm_Chr7g0191381
rosa_laevigata	RLG00000004458 RLG00000004460 RLG00000007828 RLG00000025032 RLG00000025033
rosa_multiflora	Rmu_sc0000449.1_g000021 Rmu_sc0000449.1_g000042 Rmu_sc0000744.1_g000068 Rmu_sc0002661.1_g000004 Rmu_sc0003763.1_g000003
rosa_roxburghii	Rroxscaffold_157G00438330 Rroxscaffold_157G00438340 Rroxscaffold_3G00263860 Rroxscaffold_3G00263870 Rroxscaffold_5G00362120 Rroxscaffold_6G00419690 Rroxscaffold_6G00419710
rosa_rugosa	Rorug04G0157000 Rorug06G0510300 Rorug06G0510400
rosa_samantha	Rh3AG098800 Rh3BG102100 Rh3BG102600 Rh3CG104200 Rh3CG104400 Rh3DG103300 Rh3DG103600 Rh4BG219900 Rh4DG216900 Rh7AG117900 Rh7BG119900 Rh7CG122800 Rh7DG120900
rosa_wichuraiana	Rw3G008360 Rw3G008380 Rw4G018670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	1 cut(s)	48
AfaI	GTAC	1 cut(s)	186
AfiI	CCNNNNNNNGG	2 cut(s)	34, 246
AgeI	ACCGGT	1 cut(s)	21
AgsI	TTSAA	1 cut(s)	33
AjnI	CCWGG	1 cut(s)	74
Alw21I	GWGCWC	1 cut(s)	239
ArsI	GACNNNNNNTTYG	1 cut(s)	384
AsiGI	ACCGGT	1 cut(s)	21
Asp700I	GAANNNNTTC	1 cut(s)	257
AsuHPI	GGTGA	5 cut(s)	64, 126, 166, 298, 299
BanII	GRGCYC	1 cut(s)	64
Bbv12I	GWGCWC	1 cut(s)	239
BciT130I	CCWGG	1 cut(s)	76
BfaI	CTAG	1 cut(s)	104
BfmI	CTRYAG	1 cut(s)	202
Bme1390I	CCNGG	1 cut(s)	76
BmiI	GGNNCC	1 cut(s)	26
BmrFI	CCNGG	1 cut(s)	76
BplI	GAGNNNNNCTC	2 cut(s)	288, 320
BsaWI	WCCGGW	1 cut(s)	21
BsaXI	ACNNNNNCTCC	2 cut(s)	145, 175
Bsc4I	CCNNNNNNNGG	2 cut(s)	34, 246
Bse118I	RCCGGY	1 cut(s)	21
Bse1I	ACTGG	1 cut(s)	289
BseBI	CCWGG	1 cut(s)	76
BseLI	CCNNNNNNNGG	2 cut(s)	34, 246
BseNI	ACTGG	1 cut(s)	289
BseYI	CCCAGC	1 cut(s)	149
BshTI	ACCGGT	1 cut(s)	21
BsiHKAI	GWGCWC	1 cut(s)	239
BsiSI	CCGG	1 cut(s)	22
BslFI	GGGAC	2 cut(s)	209, 282
BslI	CCNNNNNNNGG	2 cut(s)	34, 246
BsmFI	GGGAC	2 cut(s)	209, 282
Bsp1286I	GDGCHC	2 cut(s)	64, 239
BspACI	CCGC	1 cut(s)	48
BspLI	GGNNCC	1 cut(s)	26
BsrFI	RCCGGY	1 cut(s)	21
BsrI	ACTGG	1 cut(s)	289
BssAI	RCCGGY	1 cut(s)	21
Bst2UI	CCWGG	1 cut(s)	76
Bst4CI	ACNGT	1 cut(s)	388
BstC8I	GCNNGC	3 cut(s)	123, 209, 330
BstMWI	GCNNNNNNNGC	1 cut(s)	59
BstNI	CCWGG	1 cut(s)	76
BstSCI	CCNGG	1 cut(s)	74
BstSFI	CTRYAG	1 cut(s)	202
BstXI	CCANNNNNNTGG	1 cut(s)	149
BtsIMutI	CAGTG	1 cut(s)	98
Cac8I	GCNNGC	3 cut(s)	123, 209, 330
Cfr10I	RCCGGY	1 cut(s)	21
Csp6I	GTAC	1 cut(s)	185
CspAI	ACCGGT	1 cut(s)	21
CviAII	CATG	3 cut(s)	192, 232, 277
CviJI	RGCY	6 cut(s)	62, 79, 211, 230, 328, 332
CviKI_1	RGCY	6 cut(s)	62, 79, 211, 230, 328, 332
CviQI	GTAC	1 cut(s)	185
Eco24I	GRGCYC	1 cut(s)	64
EcoRII	CCWGG	1 cut(s)	74
EcoT38I	GRGCYC	1 cut(s)	64
FaeI	CATG	3 cut(s)	195, 235, 280
FaiI	YATR	5 cut(s)	193, 233, 273, 278, 384
FalI	AAGNNNNNCTT	4 cut(s)	200, 232, 242, 274
FaqI	GGGAC	2 cut(s)	209, 282
FatI	CATG	3 cut(s)	191, 231, 276
FriOI	GRGCYC	1 cut(s)	64
FspBI	CTAG	1 cut(s)	104
GsaI	CCCAGC	1 cut(s)	153
HapII	CCGG	1 cut(s)	22
Hin1II	CATG	3 cut(s)	195, 235, 280
HincII	GTYRAC	1 cut(s)	282
HindII	GTYRAC	1 cut(s)	282
HinfI	GANTC	3 cut(s)	111, 253, 393
HpaII	CCGG	1 cut(s)	22
HphI	GGTGA	5 cut(s)	64, 126, 166, 298, 299
Hpy166II	GTNNAC	2 cut(s)	282, 290
Hpy8I	GTNNAC	2 cut(s)	282, 290
HpyAV	CCTTC	2 cut(s)	32, 39
HpyCH4III	ACNGT	1 cut(s)	388
HpyCH4V	TGCA	2 cut(s)	96, 224
HpyF10VI	GCNNNNNNNGC	1 cut(s)	59
Hsp92II	CATG	3 cut(s)	195, 235, 280
LmnI	GCTCC	1 cut(s)	353
MaeI	CTAG	1 cut(s)	104
MaeIII	GTNAC	4 cut(s)	17, 161, 300, 316
MboII	GAAGA	1 cut(s)	262
MfeI	CAATTG	1 cut(s)	357
MhlI	GDGCHC	2 cut(s)	64, 239
MluCI	AATT	3 cut(s)	13, 144, 357
MlyI	GAGTC	2 cut(s)	105, 387
MnlI	CCTC	4 cut(s)	259, 318, 321, 379
MroXI	GAANNNNTTC	1 cut(s)	257
MslI	CAYNNNNRTG	1 cut(s)	242
MspI	CCGG	1 cut(s)	22
MspR9I	CCNGG	1 cut(s)	76
MunI	CAATTG	1 cut(s)	357
MvaI	CCWGG	1 cut(s)	76
MwoI	GCNNNNNNNGC	1 cut(s)	59
NlaIII	CATG	3 cut(s)	195, 235, 280
NlaIV	GGNNCC	1 cut(s)	26
NmuCI	GTSAC	4 cut(s)	17, 161, 300, 316
PdmI	GAANNNNTTC	1 cut(s)	257
PfeI	GAWTC	1 cut(s)	253
PinAI	ACCGGT	1 cut(s)	21
PleI	GAGTC	2 cut(s)	105, 387
PpsI	GAGTC	2 cut(s)	105, 387
Psp6I	CCWGG	1 cut(s)	74
PspFI	CCCAGC	1 cut(s)	149
PspGI	CCWGG	1 cut(s)	74
PspN4I	GGNNCC	1 cut(s)	26
RsaI	GTAC	1 cut(s)	186
RsaNI	GTAC	1 cut(s)	185
RseI	CAYNNNNRTG	1 cut(s)	242
SchI	GAGTC	2 cut(s)	105, 387
ScrFI	CCNGG	1 cut(s)	76
SduI	GDGCHC	2 cut(s)	64, 239
SetI	ASST	4 cut(s)	43, 77, 179, 242
SfcI	CTRYAG	1 cut(s)	202
SmiMI	CAYNNNNRTG	1 cut(s)	242
Sse9I	AATT	3 cut(s)	13, 144, 357
SsiI	CCGC	1 cut(s)	48
SspMI	CTAG	1 cut(s)	104
StyD4I	CCNGG	1 cut(s)	74
TaaI	ACNGT	1 cut(s)	388
TaqI	TCGA	1 cut(s)	58
TasI	AATT	3 cut(s)	13, 144, 357
TfiI	GAWTC	1 cut(s)	253
TscAI	CASTG	1 cut(s)	98
TseFI	GTSAC	4 cut(s)	17, 161, 300, 316
Tsp45I	GTSAC	4 cut(s)	17, 161, 300, 316
TspGWI	ACGGA	2 cut(s)	50, 278
TspRI	CASTG	1 cut(s)	98
XmnI	GAANNNNTTC	1 cut(s)	257
XspI	CTAG	1 cut(s)	104

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.