Prupe.7G117800_v2.0.a1

phosphopantothenoylcysteine decarboxylase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0001212
Physical Location & Seq
Reverse (-)
14250758 .. 14251425
668 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G117800.1

Sequence Viewer

Length: 561 bp
ATGACTTGTGCTGGACCTGGAATCTCTCATTGGGAGCCAACGCAAGCTGAGGCTGCTCTGAGCAAGCCACAGATTCTCCTCGTTGCTAGCGGAAGTATAGCGGCCACAAAGTTTGCTCACCTCTGCCGTAGTTTTTTTGGATGGTCAGAAGTAAGAGTAGTTGCTACAAAAGCATCTTTTCATTTCATTGATATTGCATCACTCTCCAGGGATGTAATACTTTACACCGATGAGGATGAACGGTCCAGATGGAACACAACAGGTGATAGCTTGCTTCCTATTGAGCTCCGCGTATTTCAAAAGAAACTTTCTTTTTCTTATGTTTCTGTATATGCATGGGATTTCAGCAAGCCTTTATTTGTTGCACCGGCCATGAACACCTTGATGTGGAACAATTTGTTCACCCAACGACATATCAGGATGATCAAAGATGAACTCAGAATTTCACTCATCCTTCCTCTCACTATAAATGGTGCAATGACTGAAACTAATGAGATTTACGGTGCTGTACAATGTCGTTTACAGTCACGATCTCCGAGAGGCCATGATGCCAGTATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000166 GO:0003674 GO:0003824 GO:0004633 GO:0004799 GO:0004857 GO:0004864 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006139 GO:0006163 GO:0006164 GO:0006220 GO:0006221 GO:0006231 GO:0006725 GO:0006732 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006873 GO:0006950 GO:0006970 GO:0007346 GO:0008150 GO:0008152 GO:0008168 GO:0009058 GO:0009108 GO:0009117 GO:0009123 GO:0009124 GO:0009129 GO:0009130 GO:0009150 GO:0009152 GO:0009157 GO:0009162 GO:0009165 GO:0009176 GO:0009177 GO:0009219 GO:0009221 GO:0009259 GO:0009260 GO:0009262 GO:0009263 GO:0009265 GO:0009394 GO:0009628 GO:0009651 GO:0009892 GO:0009966 GO:0009987 GO:0010181 GO:0010563 GO:0010605 GO:0010646 GO:0010921 GO:0010923 GO:0015936 GO:0015937 GO:0016740 GO:0016741 GO:0016829 GO:0016830 GO:0016831 GO:0017076 GO:0018130 GO:0019208 GO:0019212 GO:0019220 GO:0019222 GO:0019438 GO:0019637 GO:0019692 GO:0019693 GO:0019725 GO:0019888 GO:0023051 GO:0030003 GO:0030004 GO:0030234 GO:0031323 GO:0031324 GO:0031399 GO:0031400 GO:0032259 GO:0032268 GO:0032269 GO:0032515 GO:0032553 GO:0032991 GO:0033865 GO:0033866 GO:0033875 GO:0034030 GO:0034032 GO:0034033 GO:0034641 GO:0034654 GO:0035303 GO:0035304 GO:0035305 GO:0035308 GO:0036094 GO:0042083 GO:0042592 GO:0042802 GO:0043086 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043666 GO:0044092 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0045936 GO:0046073 GO:0046385 GO:0046390 GO:0046483 GO:0048037 GO:0048519 GO:0048523 GO:0048583 GO:0048878 GO:0050662 GO:0050789 GO:0050790 GO:0050794 GO:0050801 GO:0050896 GO:0051171 GO:0051172 GO:0051174 GO:0051186 GO:0051188 GO:0051246 GO:0051248 GO:0051336 GO:0051346 GO:0051726 GO:0055067 GO:0055080 GO:0055082 GO:0055086 GO:0060255 GO:0065007 GO:0065008 GO:0065009 GO:0071513 GO:0071704 GO:0072521 GO:0072522 GO:0072527 GO:0072528 GO:0080090 GO:0090407 GO:0097159 GO:0097367 GO:0098771 GO:0098772 GO:1901135 GO:1901137 GO:1901265 GO:1901293 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1902494 GO:1990143
KEGG Pathways
Metabolic & Signaling
ko00240 ko00670 ko00770 ko00780 ko01100 ko01523 map00240 map00670 map00770 map00780 map01100 map01523
Pfam Domains
Protein Families
Flavoprotein

Protein Analysis

187

Amino Acids

20.95

Weight (kDa)

8.49

Isoelectric Point (pI)

43.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 291
AciI CCGC 3 cut(s) 90, 101, 289
AcoI YGGCCR 2 cut(s) 102, 369
AcsI RAATTY 1 cut(s) 441
AfaI GTAC 1 cut(s) 510
AfiI CCNNNNNNNGG 1 cut(s) 387
AgsI TTSAA 1 cut(s) 299
AjnI CCWGG 2 cut(s) 16, 206
AjuI GAANNNNNNNTTGG 2 cut(s) 13, 45
AluBI AGCT 3 cut(s) 47, 270, 286
AluI AGCT 3 cut(s) 47, 270, 286
Alw21I GWGCWC 1 cut(s) 288
AoxI GGCC 3 cut(s) 102, 369, 541
ApeKI GCWGC 1 cut(s) 53
ApoI RAATTY 1 cut(s) 441
AspS9I GGNCC 2 cut(s) 14, 243
AsuHPI GGTGA 3 cut(s) 110, 275, 394
AsuNHI GCTAGC 1 cut(s) 86
AvaII GGWCC 2 cut(s) 14, 243
BanII GRGCYC 1 cut(s) 288
Bbv12I GWGCWC 1 cut(s) 288
BbvCI CCTCAGC 1 cut(s) 48
BbvI GCAGC 1 cut(s) 40
BccI CCATC 2 cut(s) 135, 243
BceAI ACGGC 1 cut(s) 111
BciT130I CCWGG 2 cut(s) 18, 208
BclI TGATCA 1 cut(s) 423
BfaI CTAG 1 cut(s) 87
BisI GCNGC 2 cut(s) 54, 102
BlsI GCNGC 2 cut(s) 55, 103
Bme1390I CCNGG 2 cut(s) 18, 208
Bme18I GGWCC 2 cut(s) 14, 243
BmgT120I GGNCC 2 cut(s) 14, 243
BmiI GGNNCC 1 cut(s) 36
BmrFI CCNGG 2 cut(s) 18, 208
BmsI GCATC 3 cut(s) 182, 206, 538
BmtI GCTAGC 1 cut(s) 90
BpmI CTGGAG 1 cut(s) 190
Bpu10I CCTNAGC 1 cut(s) 48
BsaJI CCNNGG 1 cut(s) 207
BsaXI ACNNNNNCTCC 2 cut(s) 60, 90
Bsc4I CCNNNNNNNGG 1 cut(s) 387
Bse118I RCCGGY 1 cut(s) 367
Bse1I ACTGG 1 cut(s) 552
Bse3DI GCAATG 1 cut(s) 483
BseBI CCWGG 2 cut(s) 18, 208
BseDI CCNNGG 1 cut(s) 207
BseGI GGATG 5 cut(s) 146, 217, 241, 426, 450
BseLI CCNNNNNNNGG 1 cut(s) 387
BseMI GCAATG 1 cut(s) 483
BseMII CTCAG 3 cut(s) 39, 50, 451
BseNI ACTGG 1 cut(s) 552
BseRI GAGGAG 1 cut(s) 68
BseXI GCAGC 1 cut(s) 40
Bsh1236I CGCG 1 cut(s) 291
BshFI GGCC 3 cut(s) 104, 371, 543
BsiHKAI GWGCWC 1 cut(s) 288
BsiSI CCGG 1 cut(s) 368
BslI CCNNNNNNNGG 1 cut(s) 387
BsnI GGCC 3 cut(s) 104, 371, 543
Bsp1286I GDGCHC 1 cut(s) 288
Bsp1407I TGTACA 1 cut(s) 508
Bsp143I GATC 2 cut(s) 423, 530
BspACI CCGC 3 cut(s) 90, 101, 289
BspANI GGCC 3 cut(s) 104, 371, 543
BspCNI CTCAG 3 cut(s) 40, 51, 450
BspFNI CGCG 1 cut(s) 291
BspLI GGNNCC 1 cut(s) 36
BspOI GCTAGC 1 cut(s) 90
BsrDI GCAATG 1 cut(s) 483
BsrFI RCCGGY 1 cut(s) 367
BsrGI TGTACA 1 cut(s) 508
BsrI ACTGG 1 cut(s) 552
BssAI RCCGGY 1 cut(s) 367
BssECI CCNNGG 1 cut(s) 207
BssMI GATC 2 cut(s) 423, 530
Bst2UI CCWGG 2 cut(s) 18, 208
Bst4CI ACNGT 3 cut(s) 243, 503, 525
BstAUI TGTACA 1 cut(s) 508
BstC8I GCNNGC 5 cut(s) 45, 65, 88, 272, 350
BstDEI CTNAG 3 cut(s) 48, 59, 437
BstF5I GGATG 5 cut(s) 146, 217, 241, 426, 450
BstFNI CGCG 1 cut(s) 291
BstKTI GATC 2 cut(s) 426, 533
BstMBI GATC 2 cut(s) 423, 530
BstMWI GCNNNNNNNGC 2 cut(s) 53, 170
BstNI CCWGG 2 cut(s) 18, 208
BstSCI CCNGG 2 cut(s) 16, 206
BstUI CGCG 1 cut(s) 291
BstV1I GCAGC 1 cut(s) 40
BsuRI GGCC 3 cut(s) 104, 371, 543
BtsCI GGATG 5 cut(s) 146, 217, 241, 426, 450
Cac8I GCNNGC 5 cut(s) 45, 65, 88, 272, 350
Cfr10I RCCGGY 1 cut(s) 367
Cfr13I GGNCC 2 cut(s) 14, 243
Csp6I GTAC 1 cut(s) 509
CspCI CAANNNNNGTGG 2 cut(s) 94, 129
CviAII CATG 3 cut(s) 336, 373, 545
CviQI GTAC 1 cut(s) 509
DdeI CTNAG 3 cut(s) 48, 59, 437
DpnI GATC 2 cut(s) 425, 532
DpnII GATC 2 cut(s) 423, 530
EaeI YGGCCR 2 cut(s) 102, 369
Ecl136II GAGCTC 1 cut(s) 286
Eco24I GRGCYC 1 cut(s) 288
Eco47I GGWCC 2 cut(s) 14, 243
Eco53kI GAGCTC 1 cut(s) 286
EcoICRI GAGCTC 1 cut(s) 286
EcoRII CCWGG 2 cut(s) 16, 206
EcoT22I ATGCAT 1 cut(s) 337
EcoT38I GRGCYC 1 cut(s) 288
FaeI CATG 3 cut(s) 339, 376, 548
FatI CATG 3 cut(s) 335, 372, 544
FbaI TGATCA 1 cut(s) 423
Fnu4HI GCNGC 2 cut(s) 54, 102
FokI GGATG 5 cut(s) 153, 224, 248, 433, 437
FriOI GRGCYC 1 cut(s) 288
Fsp4HI GCNGC 2 cut(s) 54, 102
FspBI CTAG 1 cut(s) 87
GluI GCNGC 2 cut(s) 54, 102
GsuI CTGGAG 1 cut(s) 190
HaeIII GGCC 3 cut(s) 104, 371, 543
HapII CCGG 1 cut(s) 368
Hin1II CATG 3 cut(s) 339, 376, 548
HinfI GANTC 2 cut(s) 21, 73
HpaII CCGG 1 cut(s) 368
HphI GGTGA 3 cut(s) 110, 275, 394
Hpy166II GTNNAC 2 cut(s) 402, 521
Hpy188I TCNGA 4 cut(s) 60, 148, 440, 537
Hpy188III TCNNGA 3 cut(s) 246, 418, 528
Hpy8I GTNNAC 2 cut(s) 402, 521
HpyAV CCTTC 1 cut(s) 464
HpyCH4III ACNGT 3 cut(s) 243, 503, 525
HpyCH4V TGCA 4 cut(s) 197, 335, 365, 476
HpyF10VI GCNNNNNNNGC 2 cut(s) 53, 170
HpyF3I CTNAG 3 cut(s) 48, 59, 437
Hsp92II CATG 3 cut(s) 339, 376, 548
Ksp22I TGATCA 1 cut(s) 423
Kzo9I GATC 2 cut(s) 423, 530
LmnI GCTCC 2 cut(s) 34, 291
LpnPI CCDG 8 cut(s) 3, 30, 193, 220, 246, 259, 381, 403
Lsp1109I GCAGC 1 cut(s) 40
LweI GCATC 3 cut(s) 182, 206, 538
MaeI CTAG 1 cut(s) 87
MaeIII GTNAC 1 cut(s) 525
MalI GATC 2 cut(s) 425, 532
MboI GATC 2 cut(s) 423, 530
MhlI GDGCHC 1 cut(s) 288
MluCI AATT 2 cut(s) 394, 441
MnlI CCTC 6 cut(s) 43, 89, 131, 226, 468, 533
Mph1103I ATGCAT 1 cut(s) 337
MslI CAYNNNNRTG 1 cut(s) 383
MspI CCGG 1 cut(s) 368
MspR9I CCNGG 2 cut(s) 18, 208
MvaI CCWGG 2 cut(s) 18, 208
MvnI CGCG 1 cut(s) 291
MwoI GCNNNNNNNGC 2 cut(s) 53, 170
NdeII GATC 2 cut(s) 423, 530
NheI GCTAGC 1 cut(s) 86
NlaIII CATG 3 cut(s) 339, 376, 548
NlaIV GGNNCC 1 cut(s) 36
NmuCI GTSAC 1 cut(s) 525
NsiI ATGCAT 1 cut(s) 337
PfeI GAWTC 2 cut(s) 21, 73
PkrI GCNGC 2 cut(s) 55, 103
Psp124BI GAGCTC 1 cut(s) 288
Psp6I CCWGG 2 cut(s) 16, 206
PspGI CCWGG 2 cut(s) 16, 206
PspN4I GGNNCC 1 cut(s) 36
PspPI GGNCC 2 cut(s) 14, 243
RsaI GTAC 1 cut(s) 510
RsaNI GTAC 1 cut(s) 509
RseI CAYNNNNRTG 1 cut(s) 383
SacI GAGCTC 1 cut(s) 288
SatI GCNGC 2 cut(s) 54, 102
Sau3AI GATC 2 cut(s) 423, 530
Sau96I GGNCC 2 cut(s) 14, 243
ScrFI CCNGG 2 cut(s) 18, 208
SduI GDGCHC 1 cut(s) 288
SetI ASST 7 cut(s) 19, 49, 123, 265, 272, 288, 383
SfaNI GCATC 3 cut(s) 182, 206, 538
SinI GGWCC 2 cut(s) 14, 243
SmiMI CAYNNNNRTG 1 cut(s) 383
Sse9I AATT 2 cut(s) 394, 441
SsiI CCGC 3 cut(s) 90, 101, 289
SspMI CTAG 1 cut(s) 87
SstI GAGCTC 1 cut(s) 288
StyD4I CCNGG 2 cut(s) 16, 206
TaaI ACNGT 3 cut(s) 243, 503, 525
TasI AATT 2 cut(s) 394, 441
TatI WGTACW 1 cut(s) 508
TauI GCSGC 1 cut(s) 104
TfiI GAWTC 2 cut(s) 21, 73
TseFI GTSAC 1 cut(s) 525
TseI GCWGC 1 cut(s) 53
Tsp45I GTSAC 1 cut(s) 525
TspDTI ATGAA 5 cut(s) 170, 175, 252, 389, 447
VpaK11BI GGWCC 2 cut(s) 14, 243
XapI RAATTY 1 cut(s) 441
XspI CTAG 1 cut(s) 87
Zsp2I ATGCAT 1 cut(s) 337
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.