Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0001212

Physical Location & Seq

Genomic Coordinates Reverse (-)

14251610 .. 14252658

Gene Structure 1049 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G117900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 432 bp

ATGGCTTGCTCTGAAGTTGGGAGTTGTGGAGAATCAAAGCCAATACAAGTCAATGATGCTACGAGGAAGCCACAGATTCTACTTGCTGCTACTGGAAGTGTAGCTACCTTAAGGTTTAGTAACCTCTGCCATAGTTTTTCTCCATGGGCAGAAAACAATATGGGTGATAGCGTGCTTCACATTGAGCTTCGTTGTTGGGCTGATATCATGGTTATTGCTCCATTATTAGTAAACACACTGAGCAAGATTGATGAGGGATTGTGTGACAATATACTCACCTGTGTTGTACATGCATGGGATTACAGCAAGACTTTCTTTGTCACACCGGCCATGAAGACCTTATTGTGGAGCAGTCCCTTCATGGAGCGACATATGATGTCTATTGATGAACAAGGAATTTCTCGTCCCACCAATCAGTGGTGTAATGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0004633 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006163 GO:0006164 GO:0006725 GO:0006732 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0006972 GO:0008150 GO:0008152 GO:0009058 GO:0009108 GO:0009117 GO:0009150 GO:0009152 GO:0009165 GO:0009259 GO:0009260 GO:0009628 GO:0009651 GO:0009987 GO:0010181 GO:0015936 GO:0015937 GO:0016829 GO:0016830 GO:0016831 GO:0018130 GO:0019438 GO:0019637 GO:0019693 GO:0032553 GO:0033865 GO:0033866 GO:0033875 GO:0034030 GO:0034032 GO:0034033 GO:0034641 GO:0034654 GO:0036094 GO:0042538 GO:0043167 GO:0043168 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046390 GO:0046483 GO:0048037 GO:0050662 GO:0050896 GO:0051186 GO:0051188 GO:0055086 GO:0071704 GO:0072521 GO:0072522 GO:0090407 GO:0097159 GO:0097367 GO:1901135 GO:1901137 GO:1901265 GO:1901293 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00770 ko01100 map00770 map01100

Pfam Domains

Protein Families

Flavoprotein

Protein Analysis

144

Amino Acids

15.89

Weight (kDa)

5.44

Isoelectric Point (pI)

52.01

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001212)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G48605 AT3G18030
fragaria_vesca	FvH4_5g07250 FvH4_5g07250 FvH4_5g07250
malus_domestica	MD06G1157900.v1.1 MD14G1015700.v1.1 MD14G1164500.v1.1
prunus_persica	Prupe.5G158000_v2.0.a1 Prupe.5G158000_v2.0.a1 Prupe.7G044900_v2.0.a1 Prupe.7G117800_v2.0.a1 Prupe.7G117900_v2.0.a1
pyrus_communis	pycom06g14100 pycom14g01340 pycom14g13720
rosa_chinensis	RchiOBHm_Chr3g0460241 RchiOBHm_Chr3g0460251 RchiOBHm_Chr4g0419061 RchiOBHm_Chr7g0191381
rosa_laevigata	RLG00000004458 RLG00000004460 RLG00000007828 RLG00000025032 RLG00000025033
rosa_multiflora	Rmu_sc0000449.1_g000021 Rmu_sc0000449.1_g000042 Rmu_sc0000744.1_g000068 Rmu_sc0002661.1_g000004 Rmu_sc0003763.1_g000003
rosa_roxburghii	Rroxscaffold_157G00438330 Rroxscaffold_157G00438340 Rroxscaffold_3G00263860 Rroxscaffold_3G00263870 Rroxscaffold_5G00362120 Rroxscaffold_6G00419690 Rroxscaffold_6G00419710
rosa_rugosa	Rorug04G0157000 Rorug06G0510300 Rorug06G0510400
rosa_samantha	Rh3AG098800 Rh3BG102100 Rh3BG102600 Rh3CG104200 Rh3CG104400 Rh3DG103300 Rh3DG103600 Rh4BG219900 Rh4DG216900 Rh7AG117900 Rh7BG119900 Rh7CG122800 Rh7DG120900
rosa_wichuraiana	Rw3G008360 Rw3G008380 Rw4G018670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	417
AcoI	YGGCCR	1 cut(s)	327
AcsI	RAATTY	1 cut(s)	396
AcuI	CTGAAG	1 cut(s)	33
AfaI	GTAC	1 cut(s)	288
AfiI	CCNNNNNNNGG	2 cut(s)	345, 417
AflII	CTTAAG	1 cut(s)	109
AluBI	AGCT	2 cut(s)	104, 187
AluI	AGCT	2 cut(s)	104, 187
AoxI	GGCC	1 cut(s)	327
ApeKI	GCWGC	1 cut(s)	86
ApoI	RAATTY	1 cut(s)	396
AsuHPI	GGTGA	2 cut(s)	176, 268
BarI	GAAGNNNNNNTAC	2 cut(s)	88, 120
BbsI	GAAGAC	1 cut(s)	341
BbvI	GCAGC	1 cut(s)	73
BfrI	CTTAAG	1 cut(s)	109
BisI	GCNGC	1 cut(s)	87
BlsI	GCNGC	1 cut(s)	88
BmsI	GCATC	1 cut(s)	46
BpiI	GAAGAC	1 cut(s)	341
BsaJI	CCNNGG	1 cut(s)	143
Bsc4I	CCNNNNNNNGG	2 cut(s)	345, 417
Bse118I	RCCGGY	1 cut(s)	325
Bse1I	ACTGG	1 cut(s)	97
BseDI	CCNNGG	1 cut(s)	143
BseLI	CCNNNNNNNGG	2 cut(s)	345, 417
BseMII	CTCAG	1 cut(s)	230
BseNI	ACTGG	1 cut(s)	97
BseXI	GCAGC	1 cut(s)	73
BshFI	GGCC	1 cut(s)	329
BsiSI	CCGG	1 cut(s)	326
BslFI	GGGAC	2 cut(s)	339, 390
BslI	CCNNNNNNNGG	2 cut(s)	345, 417
BsmFI	GGGAC	2 cut(s)	339, 390
BsnI	GGCC	1 cut(s)	329
Bsp1407I	TGTACA	1 cut(s)	286
Bsp19I	CCATGG	1 cut(s)	143
BspANI	GGCC	1 cut(s)	329
BspCNI	CTCAG	1 cut(s)	231
BspTI	CTTAAG	1 cut(s)	109
BsrFI	RCCGGY	1 cut(s)	325
BsrGI	TGTACA	1 cut(s)	286
BsrI	ACTGG	1 cut(s)	97
BssAI	RCCGGY	1 cut(s)	325
BssECI	CCNNGG	1 cut(s)	143
BssT1I	CCWWGG	1 cut(s)	143
BstAFI	CTTAAG	1 cut(s)	109
BstAUI	TGTACA	1 cut(s)	286
BstC8I	GCNNGC	2 cut(s)	7, 173
BstDEI	CTNAG	1 cut(s)	239
BstDSI	CCRYGG	1 cut(s)	143
BstNSI	RCATGY	1 cut(s)	293
BstV1I	GCAGC	1 cut(s)	73
BstV2I	GAAGAC	1 cut(s)	341
BsuRI	GGCC	1 cut(s)	329
BtgI	CCRYGG	1 cut(s)	143
BtsIMutI	CAGTG	2 cut(s)	236, 422
Cac8I	GCNNGC	2 cut(s)	7, 173
Cfr10I	RCCGGY	1 cut(s)	325
Csp6I	GTAC	1 cut(s)	287
CviAII	CATG	6 cut(s)	144, 208, 290, 294, 331, 361
CviJI	RGCY	7 cut(s)	5, 40, 70, 104, 187, 200, 329
CviKI_1	RGCY	7 cut(s)	5, 40, 70, 104, 187, 200, 329
CviQI	GTAC	1 cut(s)	287
DdeI	CTNAG	1 cut(s)	239
EaeI	YGGCCR	1 cut(s)	327
Eco130I	CCWWGG	1 cut(s)	143
Eco32I	GATATC	1 cut(s)	205
Eco57I	CTGAAG	1 cut(s)	33
EcoRV	GATATC	1 cut(s)	205
EcoT14I	CCWWGG	1 cut(s)	143
EcoT22I	ATGCAT	1 cut(s)	295
ErhI	CCWWGG	1 cut(s)	143
FaeI	CATG	6 cut(s)	147, 211, 293, 297, 334, 364
FalI	AAGNNNNNCTT	2 cut(s)	299, 331
FaqI	GGGAC	2 cut(s)	339, 390
FatI	CATG	6 cut(s)	143, 207, 289, 293, 330, 360
FauNDI	CATATG	1 cut(s)	372
Fnu4HI	GCNGC	1 cut(s)	87
Fsp4HI	GCNGC	1 cut(s)	87
GluI	GCNGC	1 cut(s)	87
HaeIII	GGCC	1 cut(s)	329
HapII	CCGG	1 cut(s)	326
Hin1II	CATG	6 cut(s)	147, 211, 293, 297, 334, 364
HinfI	GANTC	2 cut(s)	32, 76
HpaII	CCGG	1 cut(s)	326
HphI	GGTGA	2 cut(s)	176, 268
Hpy166II	GTNNAC	1 cut(s)	232
Hpy188I	TCNGA	1 cut(s)	13
Hpy8I	GTNNAC	1 cut(s)	232
HpyAV	CCTTC	1 cut(s)	367
HpyCH4V	TGCA	1 cut(s)	293
HpyF3I	CTNAG	1 cut(s)	239
Hsp92II	CATG	6 cut(s)	147, 211, 293, 297, 334, 364
LmnI	GCTCC	3 cut(s)	223, 348, 364
LpnPI	CCDG	3 cut(s)	78, 292, 339
Lsp1109I	GCAGC	1 cut(s)	73
LweI	GCATC	1 cut(s)	46
MaeIII	GTNAC	3 cut(s)	119, 263, 319
MboII	GAAGA	1 cut(s)	346
MluCI	AATT	1 cut(s)	396
MnlI	CCTC	3 cut(s)	57, 134, 247
Mph1103I	ATGCAT	1 cut(s)	295
MseI	TTAA	1 cut(s)	110
MspCI	CTTAAG	1 cut(s)	109
MspI	CCGG	1 cut(s)	326
NcoI	CCATGG	1 cut(s)	143
NdeI	CATATG	1 cut(s)	372
NlaIII	CATG	6 cut(s)	147, 211, 293, 297, 334, 364
NmuCI	GTSAC	2 cut(s)	263, 319
NsiI	ATGCAT	1 cut(s)	295
NspI	RCATGY	1 cut(s)	293
PfeI	GAWTC	2 cut(s)	32, 76
PflMI	CCANNNNNTGG	1 cut(s)	417
PkrI	GCNGC	1 cut(s)	88
RsaI	GTAC	1 cut(s)	288
RsaNI	GTAC	1 cut(s)	287
SaqAI	TTAA	1 cut(s)	110
SatI	GCNGC	1 cut(s)	87
SetI	ASST	7 cut(s)	106, 110, 116, 126, 189, 281, 341
SfaNI	GCATC	1 cut(s)	46
SmlI	CTYRAG	1 cut(s)	109
SmoI	CTYRAG	1 cut(s)	109
Sse9I	AATT	1 cut(s)	396
StyI	CCWWGG	1 cut(s)	143
TasI	AATT	1 cut(s)	396
TatI	WGTACW	1 cut(s)	286
TfiI	GAWTC	2 cut(s)	32, 76
Tru1I	TTAA	1 cut(s)	110
Tru9I	TTAA	1 cut(s)	110
TscAI	CASTG	2 cut(s)	243, 422
TseFI	GTSAC	2 cut(s)	263, 319
TseI	GCWGC	1 cut(s)	86
Tsp45I	GTSAC	2 cut(s)	263, 319
TspDTI	ATGAA	3 cut(s)	347, 349, 402
TspRI	CASTG	2 cut(s)	243, 422
Van91I	CCANNNNNTGG	1 cut(s)	417
Vha464I	CTTAAG	1 cut(s)	109
XapI	RAATTY	1 cut(s)	396
XceI	RCATGY	1 cut(s)	293
Zsp2I	ATGCAT	1 cut(s)	295

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.