Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0001867

Physical Location & Seq

Genomic Coordinates Forward (+)

21921048 .. 21922404

Gene Structure 1357 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G257600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 987 bp

ATGCATGGTTCACACACATCTTCTATGGCCACTTCAATATCTTACTTGGCTAGTAGACCTGCCCTTGTTTTTGTTGTTGCGTTATTGGAATATTATCTCATCTCCCTCAATTACCTGGTAATCAGTGCTAACAGCGCTCCTAATTATAATTACTGCAGACCCATTGAAGCCAACGACACTGACCTGATTCAGTTTGCGTTGAACTTGGAATTCTTGGAGGCTGAGTTTTTTCTGTATGGTGCTCTTGGCGAAGGGCTCGATGCTATCAGTCCAAATTTGGCTCTAGGTGGGCCCCCTCCCATTGGTGGTCACAAGGCCAATCTCAACCCTCTTGTTGCCCCTATCATCCAAGAATTTGGATATCAAGAAGTTGGTCATCTCAGAGCAATTATTACAACAATAGGAGGATTTCCAAGGCCTCTGTTAAACCTGAGCCGTGAGAATTTCGCAGCACTGTTTGACCAAGCAGCGGGGTTCCCGTTGACCCCTCCATTTGACCCATATGCAAACTCGGTCAATTATCTGCTCGCATCCTATGCCATCCCTTACGTGGGACTGGTAGGTTATGTTGGCACCATTCCAAACCTCACTGAGCCAACTAACCGTAGATTGGTGGCATCACTTTTGGGGGTGGAGGCCGGACAAGATGCAGTGATACGTGCCTTGCTGTATAAGATGGCTCATTGGAAGGTGTTTCCGTACAGACTCACAGTGGCTGATTTCACCAACCTAATTTCTGGGCTTAGGAACAAGCTTGGCGGGTGTGGCATCAAAGATGAAGGCATCATAGTGCCCGAGACGCTCGGGGCTGAGAATCGGACTTGTAGCAACGTCTTGTCGGCCGACCTGGATTCGCTGTCGTATGCGAGAACACAACCTGAGATCCTGAGGATTGTGTATGCAACTGGCGATGAGTCTGTGCCAGGAGGATTTTATCCTCGAGGTGCAAATGGCAACATTGCAAGGCGCTTCCTTAATGAGTATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ferritin_2

Protein Analysis

329

Amino Acids

35.58

Weight (kDa)

5.28

Isoelectric Point (pI)

37.8

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001867)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G62730 AT3G62730
fragaria_vesca	FvH4_2g21640 FvH4_2g25280 FvH4_2g25280 FvH4_2g25300 FvH4_2g25320
malus_domestica	MD03G1284600.v1.1 MD11G1014700.v1.1
prunus_persica	Prupe.8G257600_v2.0.a1 Prupe.8G257700_v2.0.a1
pyrus_communis	pycom03g22540 pycom03g22550
rosa_chinensis	RchiOBHm_Chr6g0252921 RchiOBHm_Chr6g0293411 RchiOBHm_Chr6g0293441
rosa_laevigata	RLG00000011946 RLG00000011948 RLG00000015048 RLG00000032763
rosa_multiflora	Rmu_sc0002560.1_g000001 Rmu_sc0006269.1_g000018 Rmu_sc0006269.1_g000021 Rmu_sc0016103.1_g000001
rosa_roxburghii	Rroxscaffold_7G00174150 Rroxscaffold_7G00174170 Rroxscaffold_7G00212280 Rroxscaffold_7G00212290
rosa_rugosa	Rorug05G0541500 Rorug06G0235500 Rorug06G0235700
rosa_samantha	Rh6AG055800 Rh6AG348200 Rh6AG348300 Rh6AG348400 Rh6BG050100 Rh6BG355900 Rh6BG356000 Rh6CG048500 Rh6CG362200 Rh6DG044100 Rh6DG349100 Rh6DG349600
rosa_wichuraiana	Rw6G005050 Rw6G030300 Rw6G030310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	147
AbsI	CCTCGAGG	1 cut(s)	939
Acc36I	ACCTGC	1 cut(s)	67
AccB1I	GGYRCC	1 cut(s)	572
AccI	GTMKAC	1 cut(s)	55
AciI	CCGC	2 cut(s)	470, 759
AclWI	GGATC	1 cut(s)	877
AcoI	YGGCCR	2 cut(s)	27, 840
AcsI	RAATTY	4 cut(s)	209, 274, 353, 442
AfaI	GTAC	1 cut(s)	701
AfeI	AGCGCT	1 cut(s)	136
AfiI	CCNNNNNNNGG	6 cut(s)	302, 305, 469, 550, 551, 610
AgsI	TTSAA	3 cut(s)	36, 167, 202
AjnI	CCWGG	3 cut(s)	114, 846, 922
AluBI	AGCT	1 cut(s)	754
AluI	AGCT	1 cut(s)	754
Alw21I	GWGCWC	1 cut(s)	244
Alw26I	GTCTC	1 cut(s)	791
AlwI	GGATC	1 cut(s)	877
AlwNI	CAGNNNCTG	1 cut(s)	716
Ama87I	CYCGRG	3 cut(s)	794, 803, 939
Aor51HI	AGCGCT	1 cut(s)	136
AoxI	GGCC	6 cut(s)	27, 290, 315, 416, 636, 840
ApaI	GGGCCC	1 cut(s)	294
ApeKI	GCWGC	2 cut(s)	449, 467
ApoI	RAATTY	4 cut(s)	209, 274, 353, 442
AspLEI	GCGC	2 cut(s)	137, 969
AspS9I	GGNCC	2 cut(s)	290, 291
AsuHPI	GGTGA	1 cut(s)	715
AvaI	CYCGRG	3 cut(s)	794, 803, 939
AxyI	CCTNAGG	1 cut(s)	887
BaeGI	GKGCMC	2 cut(s)	294, 795
BalI	TGGCCA	1 cut(s)	29
BanI	GGYRCC	1 cut(s)	572
BanII	GRGCYC	2 cut(s)	258, 294
Bbv12I	GWGCWC	1 cut(s)	244
BbvI	GCAGC	2 cut(s)	461, 479
BccI	CCATC	2 cut(s)	548, 670
BceAI	ACGGC	1 cut(s)	420
BciT130I	CCWGG	3 cut(s)	116, 848, 924
BcoDI	GTCTC	1 cut(s)	791
BfaI	CTAG	2 cut(s)	51, 284
BfmI	CTRYAG	1 cut(s)	154
BfoI	RGCGCY	2 cut(s)	138, 970
BfuAI	ACCTGC	1 cut(s)	67
BisI	GCNGC	2 cut(s)	450, 468
BlsI	GCNGC	2 cut(s)	451, 469
Bme1390I	CCNGG	3 cut(s)	116, 848, 924
BmeT110I	CYCGRG	3 cut(s)	794, 803, 939
BmgT120I	GGNCC	2 cut(s)	290, 291
BmiI	GGNNCC	4 cut(s)	292, 293, 476, 574
BmrFI	CCNGG	3 cut(s)	116, 848, 924
BmsI	GCATC	6 cut(s)	250, 539, 626, 637, 777, 792
Bpu10I	CCTNAGC	2 cut(s)	431, 743
BsaAI	YACGTR	2 cut(s)	550, 659
BsaJI	CCNNGG	1 cut(s)	413
BsaXI	ACNNNNNCTCC	2 cut(s)	209, 239
Bsc4I	CCNNNNNNNGG	6 cut(s)	302, 305, 469, 550, 551, 610
Bse1I	ACTGG	2 cut(s)	561, 910
Bse21I	CCTNAGG	1 cut(s)	887
Bse3DI	GCAATG	1 cut(s)	957
BseBI	CCWGG	3 cut(s)	116, 848, 924
BseDI	CCNNGG	1 cut(s)	413
BseGI	GGATG	3 cut(s)	345, 530, 540
BseLI	CCNNNNNNNGG	6 cut(s)	302, 305, 469, 550, 551, 610
BseMI	GCAATG	1 cut(s)	957
BseMII	CTCAG	7 cut(s)	213, 394, 422, 582, 801, 870, 878
BseNI	ACTGG	2 cut(s)	561, 910
BseSI	GKGCMC	2 cut(s)	294, 795
BseX3I	CGGCCG	1 cut(s)	840
BseXI	GCAGC	2 cut(s)	461, 479
Bsh1285I	CGRYCG	1 cut(s)	843
BshFI	GGCC	6 cut(s)	29, 292, 317, 418, 638, 842
BshNI	GGYRCC	1 cut(s)	572
BsiEI	CGRYCG	1 cut(s)	843
BsiHKAI	GWGCWC	1 cut(s)	244
BsiHKCI	CYCGRG	3 cut(s)	794, 803, 939
BsiSI	CCGG	1 cut(s)	639
BslFI	GGGAC	1 cut(s)	567
BslI	CCNNNNNNNGG	6 cut(s)	302, 305, 469, 550, 551, 610
BsmAI	GTCTC	1 cut(s)	791
BsmBI	CGTCTC	1 cut(s)	791
BsmFI	GGGAC	1 cut(s)	567
BsnI	GGCC	6 cut(s)	29, 292, 317, 418, 638, 842
BsoBI	CYCGRG	3 cut(s)	794, 803, 939
Bsp120I	GGGCCC	1 cut(s)	290
Bsp1286I	GDGCHC	4 cut(s)	244, 258, 294, 795
Bsp143I	GATC	1 cut(s)	882
BspACI	CCGC	2 cut(s)	470, 759
BspANI	GGCC	6 cut(s)	29, 292, 317, 418, 638, 842
BspCNI	CTCAG	7 cut(s)	214, 393, 423, 583, 802, 871, 879
BspLI	GGNNCC	4 cut(s)	292, 293, 476, 574
BspMAI	CTGCAG	1 cut(s)	158
BspMI	ACCTGC	1 cut(s)	67
BspPI	GGATC	1 cut(s)	877
BspT107I	GGYRCC	1 cut(s)	572
BsrDI	GCAATG	1 cut(s)	957
BsrI	ACTGG	2 cut(s)	561, 910
BssECI	CCNNGG	1 cut(s)	413
BssMI	GATC	1 cut(s)	882
BssT1I	CCWWGG	1 cut(s)	413
Bst2UI	CCWGG	3 cut(s)	116, 848, 924
Bst4CI	ACNGT	3 cut(s)	456, 605, 712
BstAPI	GCANNNNNTGC	1 cut(s)	536
BstBAI	YACGTR	2 cut(s)	550, 659
BstC8I	GCNNGC	1 cut(s)	528
BstDEI	CTNAG	8 cut(s)	222, 380, 431, 591, 743, 810, 879, 887
BstF5I	GGATG	3 cut(s)	345, 530, 540
BstH2I	RGCGCY	2 cut(s)	138, 970
BstHHI	GCGC	2 cut(s)	137, 969
BstKTI	GATC	1 cut(s)	885
BstMAI	GTCTC	1 cut(s)	791
BstMBI	GATC	1 cut(s)	882
BstMCI	CGRYCG	1 cut(s)	843
BstMWI	GCNNNNNNNGC	4 cut(s)	134, 536, 765, 799
BstNI	CCWGG	3 cut(s)	116, 848, 924
BstSCI	CCNGG	3 cut(s)	114, 846, 922
BstSFI	CTRYAG	1 cut(s)	154
BstSLI	GKGCMC	2 cut(s)	294, 795
BstV1I	GCAGC	2 cut(s)	461, 479
BstX2I	RGATCY	1 cut(s)	882
BstXI	CCANNNNNNTGG	1 cut(s)	356
BstYI	RGATCY	1 cut(s)	882
BstZI	CGGCCG	1 cut(s)	840
Bsu36I	CCTNAGG	1 cut(s)	887
BsuRI	GGCC	6 cut(s)	29, 292, 317, 418, 638, 842
BtgZI	GCGATG	1 cut(s)	924
BtsCI	GGATG	3 cut(s)	345, 530, 540
BtsI	GCAGTG	1 cut(s)	657
BtsIMutI	CAGTG	6 cut(s)	130, 177, 452, 588, 657, 717
BveI	ACCTGC	1 cut(s)	67
Cac8I	GCNNGC	1 cut(s)	528
CaiI	CAGNNNCTG	1 cut(s)	716
CfoI	GCGC	2 cut(s)	137, 969
Cfr13I	GGNCC	2 cut(s)	290, 291
CseI	GACGC	1 cut(s)	808
CsiI	ACCWGGT	1 cut(s)	114
Csp6I	GTAC	1 cut(s)	700
CviAII	CATG	1 cut(s)	5
CviQI	GTAC	1 cut(s)	700
DdeI	CTNAG	8 cut(s)	222, 380, 431, 591, 743, 810, 879, 887
DpnI	GATC	1 cut(s)	884
DpnII	GATC	1 cut(s)	882
EaeI	YGGCCR	2 cut(s)	27, 840
EagI	CGGCCG	1 cut(s)	840
EclXI	CGGCCG	1 cut(s)	840
Eco130I	CCWWGG	1 cut(s)	413
Eco147I	AGGCCT	1 cut(s)	418
Eco24I	GRGCYC	2 cut(s)	258, 294
Eco32I	GATATC	1 cut(s)	362
Eco47III	AGCGCT	1 cut(s)	136
Eco52I	CGGCCG	1 cut(s)	840
Eco81I	CCTNAGG	1 cut(s)	887
Eco88I	CYCGRG	3 cut(s)	794, 803, 939
EcoO109I	RGGNCCY	1 cut(s)	291
EcoRI	GAATTC	1 cut(s)	209
EcoRII	CCWGG	3 cut(s)	114, 846, 922
EcoRV	GATATC	1 cut(s)	362
EcoT14I	CCWWGG	1 cut(s)	413
EcoT22I	ATGCAT	1 cut(s)	6
EcoT38I	GRGCYC	2 cut(s)	258, 294
ErhI	CCWWGG	1 cut(s)	413
Esp3I	CGTCTC	1 cut(s)	791
FaeI	CATG	1 cut(s)	8
FaqI	GGGAC	1 cut(s)	567
FatI	CATG	1 cut(s)	4
FauI	CCCGC	2 cut(s)	463, 752
FauNDI	CATATG	1 cut(s)	502
FblI	GTMKAC	1 cut(s)	55
Fnu4HI	GCNGC	2 cut(s)	450, 468
FokI	GGATG	3 cut(s)	332, 517, 527
FriOI	GRGCYC	2 cut(s)	258, 294
Fsp4HI	GCNGC	2 cut(s)	450, 468
FspBI	CTAG	2 cut(s)	51, 284
GlaI	GCGC	2 cut(s)	136, 968
GluI	GCNGC	2 cut(s)	450, 468
HaeII	RGCGCY	2 cut(s)	138, 970
HaeIII	GGCC	6 cut(s)	29, 292, 317, 418, 638, 842
HapII	CCGG	1 cut(s)	639
HgaI	GACGC	1 cut(s)	808
HhaI	GCGC	2 cut(s)	137, 969
Hin1II	CATG	1 cut(s)	8
Hin6I	GCGC	2 cut(s)	135, 967
HinP1I	GCGC	2 cut(s)	135, 967
HincII	GTYRAC	1 cut(s)	483
HindII	GTYRAC	1 cut(s)	483
HindIII	AAGCTT	1 cut(s)	752
HinfI	GANTC	5 cut(s)	187, 705, 814, 851, 914
HpaII	CCGG	1 cut(s)	639
HphI	GGTGA	1 cut(s)	715
Hpy166II	GTNNAC	3 cut(s)	11, 56, 483
Hpy188I	TCNGA	2 cut(s)	383, 819
Hpy188III	TCNNGA	2 cut(s)	365, 886
Hpy8I	GTNNAC	3 cut(s)	11, 56, 483
HpyAV	CCTTC	3 cut(s)	245, 682, 773
HpyCH4III	ACNGT	3 cut(s)	456, 605, 712
HpyCH4IV	ACGT	3 cut(s)	549, 658, 831
HpyCH4V	TGCA	7 cut(s)	4, 156, 506, 650, 902, 947, 962
HpyF10VI	GCNNNNNNNGC	4 cut(s)	134, 536, 765, 799
HpyF3I	CTNAG	8 cut(s)	222, 380, 431, 591, 743, 810, 879, 887
HpySE526I	ACGT	3 cut(s)	549, 658, 831
Hsp92II	CATG	1 cut(s)	8
HspAI	GCGC	2 cut(s)	135, 967
Kzo9I	GATC	1 cut(s)	882
LmnI	GCTCC	1 cut(s)	142
Lsp1109I	GCAGC	2 cut(s)	461, 479
LweI	GCATC	6 cut(s)	250, 539, 626, 637, 777, 792
MabI	ACCWGGT	1 cut(s)	114
MaeI	CTAG	2 cut(s)	51, 284
MaeII	ACGT	3 cut(s)	549, 658, 831
MaeIII	GTNAC	1 cut(s)	308
MalI	GATC	1 cut(s)	884
MboI	GATC	1 cut(s)	882
MboII	GAAGA	1 cut(s)	12
MflI	RGATCY	1 cut(s)	882
MhlI	GDGCHC	4 cut(s)	244, 258, 294, 795
MlsI	TGGCCA	1 cut(s)	29
MluNI	TGGCCA	1 cut(s)	29
MlyI	GAGTC	2 cut(s)	699, 923
Mox20I	TGGCCA	1 cut(s)	29
Mph1103I	ATGCAT	1 cut(s)	6
MscI	TGGCCA	1 cut(s)	29
MseI	TTAA	2 cut(s)	425, 975
MslI	CAYNNNNRTG	1 cut(s)	788
Msp20I	TGGCCA	1 cut(s)	29
MspA1I	CMGCKG	1 cut(s)	470
MspI	CCGG	1 cut(s)	639
MspR9I	CCNGG	3 cut(s)	116, 848, 924
MvaI	CCWGG	3 cut(s)	116, 848, 924
MwoI	GCNNNNNNNGC	4 cut(s)	134, 536, 765, 799
NdeI	CATATG	1 cut(s)	502
NdeII	GATC	1 cut(s)	882
NlaIII	CATG	1 cut(s)	8
NlaIV	GGNNCC	4 cut(s)	292, 293, 476, 574
NmuCI	GTSAC	1 cut(s)	308
NsiI	ATGCAT	1 cut(s)	6
PaeR7I	CTCGAG	1 cut(s)	939
PceI	AGGCCT	1 cut(s)	418
PfeI	GAWTC	3 cut(s)	187, 814, 851
PkrI	GCNGC	2 cut(s)	451, 469
PleI	GAGTC	2 cut(s)	699, 922
PpsI	GAGTC	2 cut(s)	699, 922
Ppu21I	YACGTR	2 cut(s)	550, 659
PsiI	TTATAA	1 cut(s)	147
Psp6I	CCWGG	3 cut(s)	114, 846, 922
PspGI	CCWGG	3 cut(s)	114, 846, 922
PspN4I	GGNNCC	4 cut(s)	292, 293, 476, 574
PspOMI	GGGCCC	1 cut(s)	290
PspPI	GGNCC	2 cut(s)	290, 291
PspXI	VCTCGAGB	1 cut(s)	939
PstI	CTGCAG	1 cut(s)	158
PstNI	CAGNNNCTG	1 cut(s)	716
PsuI	RGATCY	1 cut(s)	882
RsaI	GTAC	1 cut(s)	701
RsaNI	GTAC	1 cut(s)	700
RseI	CAYNNNNRTG	1 cut(s)	788
SaqAI	TTAA	2 cut(s)	425, 975
SatI	GCNGC	2 cut(s)	450, 468
Sau3AI	GATC	1 cut(s)	882
Sau96I	GGNCC	2 cut(s)	290, 291
SchI	GAGTC	2 cut(s)	699, 923
ScrFI	CCNGG	3 cut(s)	116, 848, 924
SduI	GDGCHC	4 cut(s)	244, 258, 294, 795
SexAI	ACCWGGT	1 cut(s)	114
SfaNI	GCATC	6 cut(s)	250, 539, 626, 637, 777, 792
SfcI	CTRYAG	1 cut(s)	154
Sfr274I	CTCGAG	1 cut(s)	939
SlaI	CTCGAG	1 cut(s)	939
SmiMI	CAYNNNNRTG	1 cut(s)	788
SmlI	CTYRAG	1 cut(s)	939
SmoI	CTYRAG	1 cut(s)	939
SseBI	AGGCCT	1 cut(s)	418
SsiI	CCGC	2 cut(s)	470, 759
SspI	AATATT	1 cut(s)	92
SspMI	CTAG	2 cut(s)	51, 284
StuI	AGGCCT	1 cut(s)	418
StyD4I	CCNGG	3 cut(s)	114, 846, 922
StyI	CCWWGG	1 cut(s)	413
TaaI	ACNGT	3 cut(s)	456, 605, 712
TaiI	ACGT	3 cut(s)	552, 661, 834
TaqI	TCGA	2 cut(s)	258, 940
TaqII	GACCGA	1 cut(s)	502
TfiI	GAWTC	3 cut(s)	187, 814, 851
Tru1I	TTAA	2 cut(s)	425, 975
Tru9I	TTAA	2 cut(s)	425, 975
TscAI	CASTG	6 cut(s)	130, 184, 459, 595, 657, 717
TseFI	GTSAC	1 cut(s)	308
TseI	GCWGC	2 cut(s)	449, 467
Tsp45I	GTSAC	1 cut(s)	308
TspDTI	ATGAA	1 cut(s)	792
TspGWI	ACGGA	1 cut(s)	687
TspRI	CASTG	6 cut(s)	130, 184, 459, 595, 657, 717
XapI	RAATTY	4 cut(s)	209, 274, 353, 442
XcmI	CCANNNNNNNNNTGG	1 cut(s)	547
XhoI	CTCGAG	1 cut(s)	939
XmiI	GTMKAC	1 cut(s)	55
XspI	CTAG	2 cut(s)	51, 284
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.