Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0001867

Physical Location & Seq

Genomic Coordinates Forward (+)

21923641 .. 21925225

Gene Structure 1585 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G257700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 939 bp

ATGGCTACTTGTTCAATATCTTATTGTTTCAGTAGTGTCTTTGTATTTCTTGTTGCATTGGATATTCTCAGCTTCCAGGTCATGACTGCTTCAGGTCAGGCAGCCACCGACACTGACCAGGTTCAGTTTGCGTTGAACTTGGAATTCTTGGAGGCTGAGTTTTTTCTGCATGGTGCTCTTGGCAAAGGGCTCGACGATATCAGTCCAAATTTGGCTCAAGGAGGTCCGCCTCCTGCTGGTGCTCGTAAGGCCAATCTCGATATTCTTGTTGCTCGTATCATCGAGGAATTCGCTTATCAAGAAGTTGGTCATATCAGAGCAATTGTTGGAACAGTAGGAGGATTTCCAAGGCCTCTGTTAAATCTTAGCCGTCAGAATTTCGCAAAATTTTTTGACGAAGCAGTGGGCTTCACTCTAATACCTGCATTTGACCCGTATGCAAACACAGTCAACTATTTGTTGGCATCCTATTTGATCCCTTACGTTGGACTCACCGGTTATGTTGGCACCCTTCCAAACCTCACCGCCCCTGCTTCTCGCAGATTGGTTGCATCACTTTTGGGTGTTGAGGCCGGACAAGATGCAGTGATACGCACACTACTGTATGAAAGAGGGAGTCAGACCGTGCTTCCATATCCCCTGACGGTGGCTGAGTTCACGAACCGAATATCGGCGCTGAGGAACAAGCTGGGCAAGAGTGGCAACAAAGATGAAGGCATCAGAGTACCCATAACGCTTGGGGCTGAGAATAAAACCACCAGTAACGTTCTGTCAGCGGATGTGAATTCGCTATCGTATGCAAGGACGCCACCTGAGATCTTGCGGATTGTGTACGGAACAGGCAATGAATCCCGGCGCGGCGGATTTTATCCTCAAGGTGCAAATGGCAAAATTGCAAGGACCTACGTTACCGTGGCTGGAGGAGGAAGAGGAGGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ferritin_2

Protein Analysis

313

Amino Acids

33.32

Weight (kDa)

7.71

Isoelectric Point (pI)

33.1

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001867)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G62730 AT3G62730
fragaria_vesca	FvH4_2g21640 FvH4_2g25280 FvH4_2g25280 FvH4_2g25300 FvH4_2g25320
malus_domestica	MD03G1284600.v1.1 MD11G1014700.v1.1
prunus_persica	Prupe.8G257600_v2.0.a1 Prupe.8G257700_v2.0.a1
pyrus_communis	pycom03g22540 pycom03g22550
rosa_chinensis	RchiOBHm_Chr6g0252921 RchiOBHm_Chr6g0293411 RchiOBHm_Chr6g0293441
rosa_laevigata	RLG00000011946 RLG00000011948 RLG00000015048 RLG00000032763
rosa_multiflora	Rmu_sc0002560.1_g000001 Rmu_sc0006269.1_g000018 Rmu_sc0006269.1_g000021 Rmu_sc0016103.1_g000001
rosa_roxburghii	Rroxscaffold_7G00174150 Rroxscaffold_7G00174170 Rroxscaffold_7G00212280 Rroxscaffold_7G00212290
rosa_rugosa	Rorug05G0541500 Rorug06G0235500 Rorug06G0235700
rosa_samantha	Rh6AG055800 Rh6AG348200 Rh6AG348300 Rh6AG348400 Rh6BG050100 Rh6BG355900 Rh6BG356000 Rh6CG048500 Rh6CG362200 Rh6DG044100 Rh6DG349100 Rh6DG349600
rosa_wichuraiana	Rw6G005050 Rw6G030300 Rw6G030310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	430
AccB1I	GGYRCC	1 cut(s)	506
AccII	CGCG	1 cut(s)	858
AciI	CCGC	6 cut(s)	227, 525, 776, 823, 858, 861
AclI	AACGTT	1 cut(s)	765
AclWI	GGATC	1 cut(s)	469
AcsI	RAATTY	6 cut(s)	143, 208, 287, 376, 386, 784
AcuI	CTGAAG	1 cut(s)	75
AcyI	GRCGYC	1 cut(s)	806
AfaI	GTAC	2 cut(s)	726, 833
AfiI	CCNNNNNNNGG	4 cut(s)	236, 485, 646, 670
AgeI	ACCGGT	1 cut(s)	494
AgsI	TTSAA	2 cut(s)	15, 136
AjnI	CCWGG	2 cut(s)	75, 117
AluBI	AGCT	2 cut(s)	72, 688
AluI	AGCT	2 cut(s)	72, 688
Alw21I	GWGCWC	2 cut(s)	178, 244
AlwI	GGATC	1 cut(s)	469
AoxI	GGCC	3 cut(s)	249, 350, 570
ApeKI	GCWGC	1 cut(s)	101
ApoI	RAATTY	6 cut(s)	143, 208, 287, 376, 386, 784
AsiGI	ACCGGT	1 cut(s)	494
AspLEI	GCGC	2 cut(s)	676, 858
AspS9I	GGNCC	2 cut(s)	224, 900
AsuC2I	CCSGG	1 cut(s)	853
AsuHPI	GGTGA	2 cut(s)	484, 514
AvaII	GGWCC	2 cut(s)	224, 900
BanI	GGYRCC	1 cut(s)	506
BanII	GRGCYC	1 cut(s)	192
Bbv12I	GWGCWC	2 cut(s)	178, 244
BbvCI	CCTCAGC	1 cut(s)	677
BbvI	GCAGC	1 cut(s)	113
BceAI	ACGGC	1 cut(s)	354
BcgI	CGANNNNNNTGC	2 cut(s)	172, 206
BciT130I	CCWGG	2 cut(s)	77, 119
BcnI	CCSGG	1 cut(s)	853
BfaI	CTAG	1 cut(s)	937
BfoI	RGCGCY	1 cut(s)	677
BfuAI	ACCTGC	1 cut(s)	430
BglII	AGATCT	1 cut(s)	816
BisI	GCNGC	2 cut(s)	102, 859
BlsI	GCNGC	2 cut(s)	103, 860
Bme1390I	CCNGG	3 cut(s)	77, 119, 853
Bme18I	GGWCC	2 cut(s)	224, 900
BmgT120I	GGNCC	2 cut(s)	224, 900
BmiI	GGNNCC	1 cut(s)	508
BmrFI	CCNGG	3 cut(s)	77, 119, 853
BmsI	GCATC	4 cut(s)	473, 560, 571, 726
BpmI	CTGGAG	1 cut(s)	939
Bpu10I	CCTNAGC	1 cut(s)	677
BpuEI	CTTGAG	2 cut(s)	201, 858
BpuMI	CCSGG	1 cut(s)	853
BsaHI	GRCGYC	1 cut(s)	806
BsaJI	CCNNGG	2 cut(s)	347, 912
BsaWI	WCCGGW	1 cut(s)	494
BsaXI	ACNNNNNCTCC	2 cut(s)	143, 173
Bsc4I	CCNNNNNNNGG	4 cut(s)	236, 485, 646, 670
Bse118I	RCCGGY	1 cut(s)	494
Bse1I	ACTGG	1 cut(s)	759
Bse3DI	GCAATG	1 cut(s)	850
BseBI	CCWGG	2 cut(s)	77, 119
BseDI	CCNNGG	2 cut(s)	347, 912
BseGI	GGATG	2 cut(s)	464, 784
BseLI	CCNNNNNNNGG	4 cut(s)	236, 485, 646, 670
BseMI	GCAATG	1 cut(s)	850
BseMII	CTCAG	6 cut(s)	82, 147, 642, 668, 735, 804
BseNI	ACTGG	1 cut(s)	759
BseRI	GAGGAG	1 cut(s)	936
BseXI	GCAGC	1 cut(s)	113
BseYI	CCCAGC	1 cut(s)	688
Bsh1236I	CGCG	1 cut(s)	858
BshFI	GGCC	3 cut(s)	251, 352, 572
BshNI	GGYRCC	1 cut(s)	506
BshTI	ACCGGT	1 cut(s)	494
BsiHKAI	GWGCWC	2 cut(s)	178, 244
BsiSI	CCGG	3 cut(s)	495, 573, 853
BslI	CCNNNNNNNGG	4 cut(s)	236, 485, 646, 670
BsnI	GGCC	3 cut(s)	251, 352, 572
Bsp1286I	GDGCHC	3 cut(s)	178, 192, 244
Bsp143I	GATC	2 cut(s)	474, 816
BspACI	CCGC	6 cut(s)	227, 525, 776, 823, 858, 861
BspANI	GGCC	3 cut(s)	251, 352, 572
BspCNI	CTCAG	6 cut(s)	81, 148, 643, 669, 736, 805
BspFNI	CGCG	1 cut(s)	858
BspHI	TCATGA	1 cut(s)	81
BspLI	GGNNCC	1 cut(s)	508
BspMI	ACCTGC	1 cut(s)	430
BspPI	GGATC	1 cut(s)	469
BspT107I	GGYRCC	1 cut(s)	506
BsrDI	GCAATG	1 cut(s)	850
BsrFI	RCCGGY	1 cut(s)	494
BsrI	ACTGG	1 cut(s)	759
BssAI	RCCGGY	1 cut(s)	494
BssECI	CCNNGG	2 cut(s)	347, 912
BssMI	GATC	2 cut(s)	474, 816
BssNI	GRCGYC	1 cut(s)	806
BssT1I	CCWWGG	1 cut(s)	347
Bst2UI	CCWGG	2 cut(s)	77, 119
Bst4CI	ACNGT	6 cut(s)	334, 448, 603, 625, 646, 913
Bst6I	CTCTTC	1 cut(s)	922
BstACI	GRCGYC	1 cut(s)	806
BstDEI	CTNAG	7 cut(s)	68, 156, 365, 651, 677, 744, 813
BstDSI	CCRYGG	1 cut(s)	912
BstF5I	GGATG	2 cut(s)	464, 784
BstFNI	CGCG	1 cut(s)	858
BstH2I	RGCGCY	1 cut(s)	677
BstHHI	GCGC	2 cut(s)	676, 858
BstKTI	GATC	2 cut(s)	477, 819
BstMBI	GATC	2 cut(s)	474, 816
BstMWI	GCNNNNNNNGC	2 cut(s)	248, 699
BstNI	CCWGG	2 cut(s)	77, 119
BstSCI	CCNGG	3 cut(s)	75, 117, 851
BstUI	CGCG	1 cut(s)	858
BstV1I	GCAGC	1 cut(s)	113
BstX2I	RGATCY	1 cut(s)	816
BstYI	RGATCY	1 cut(s)	816
BsuRI	GGCC	3 cut(s)	251, 352, 572
BtgI	CCRYGG	1 cut(s)	912
BtsCI	GGATG	2 cut(s)	464, 784
BtsI	GCAGTG	2 cut(s)	408, 591
BtsIMutI	CAGTG	3 cut(s)	111, 408, 591
BveI	ACCTGC	1 cut(s)	430
CciI	TCATGA	1 cut(s)	81
CfoI	GCGC	2 cut(s)	676, 858
Cfr10I	RCCGGY	1 cut(s)	494
Cfr13I	GGNCC	2 cut(s)	224, 900
CseI	GACGC	1 cut(s)	814
CsiI	ACCWGGT	1 cut(s)	117
Csp6I	GTAC	2 cut(s)	725, 832
CspAI	ACCGGT	1 cut(s)	494
CviAII	CATG	2 cut(s)	82, 170
CviQI	GTAC	2 cut(s)	725, 832
DdeI	CTNAG	7 cut(s)	68, 156, 365, 651, 677, 744, 813
DpnI	GATC	2 cut(s)	476, 818
DpnII	GATC	2 cut(s)	474, 816
Eam1104I	CTCTTC	1 cut(s)	922
EarI	CTCTTC	1 cut(s)	922
EciI	GGCGGA	2 cut(s)	216, 876
Eco130I	CCWWGG	1 cut(s)	347
Eco147I	AGGCCT	1 cut(s)	352
Eco24I	GRGCYC	1 cut(s)	192
Eco32I	GATATC	1 cut(s)	199
Eco47I	GGWCC	2 cut(s)	224, 900
Eco57I	CTGAAG	1 cut(s)	75
EcoO109I	RGGNCCY	1 cut(s)	900
EcoRI	GAATTC	3 cut(s)	143, 287, 784
EcoRII	CCWGG	2 cut(s)	75, 117
EcoRV	GATATC	1 cut(s)	199
EcoT14I	CCWWGG	1 cut(s)	347
EcoT38I	GRGCYC	1 cut(s)	192
ErhI	CCWWGG	1 cut(s)	347
FaeI	CATG	2 cut(s)	85, 173
FaiI	YATR	9 cut(s)	83, 171, 312, 438, 501, 606, 634, 731, 798
FatI	CATG	2 cut(s)	81, 169
Fnu4HI	GCNGC	2 cut(s)	102, 859
FokI	GGATG	2 cut(s)	451, 791
FriOI	GRGCYC	1 cut(s)	192
Fsp4HI	GCNGC	2 cut(s)	102, 859
FspBI	CTAG	1 cut(s)	937
GlaI	GCGC	2 cut(s)	675, 857
GluI	GCNGC	2 cut(s)	102, 859
GsaI	CCCAGC	1 cut(s)	692
GsuI	CTGGAG	1 cut(s)	939
HaeII	RGCGCY	1 cut(s)	677
HaeIII	GGCC	3 cut(s)	251, 352, 572
HapII	CCGG	3 cut(s)	495, 573, 853
HgaI	GACGC	1 cut(s)	814
HhaI	GCGC	2 cut(s)	676, 858
Hin1I	GRCGYC	1 cut(s)	806
Hin1II	CATG	2 cut(s)	85, 173
Hin6I	GCGC	2 cut(s)	674, 856
HinP1I	GCGC	2 cut(s)	674, 856
HincII	GTYRAC	1 cut(s)	451
HindII	GTYRAC	1 cut(s)	451
HinfI	GANTC	3 cut(s)	489, 616, 848
HpaII	CCGG	3 cut(s)	495, 573, 853
HphI	GGTGA	2 cut(s)	484, 514
Hpy166II	GTNNAC	3 cut(s)	451, 657, 832
Hpy188I	TCNGA	4 cut(s)	317, 375, 621, 722
Hpy188III	TCNNGA	4 cut(s)	82, 257, 299, 658
Hpy8I	GTNNAC	3 cut(s)	451, 657, 832
Hpy99I	CGWCG	1 cut(s)	197
HpyAV	CCTTC	2 cut(s)	521, 707
HpyCH4III	ACNGT	6 cut(s)	334, 448, 603, 625, 646, 913
HpyCH4IV	ACGT	3 cut(s)	483, 765, 906
HpyCH4V	TGCA	9 cut(s)	56, 169, 425, 440, 551, 584, 800, 881, 896
HpyF10VI	GCNNNNNNNGC	2 cut(s)	248, 699
HpyF3I	CTNAG	7 cut(s)	68, 156, 365, 651, 677, 744, 813
HpySE526I	ACGT	3 cut(s)	483, 765, 906
Hsp92I	GRCGYC	1 cut(s)	806
Hsp92II	CATG	2 cut(s)	85, 173
HspAI	GCGC	2 cut(s)	674, 856
Kzo9I	GATC	2 cut(s)	474, 816
Lsp1109I	GCAGC	1 cut(s)	113
LweI	GCATC	4 cut(s)	473, 560, 571, 726
MabI	ACCWGGT	1 cut(s)	117
MaeI	CTAG	1 cut(s)	937
MaeII	ACGT	3 cut(s)	483, 765, 906
MaeIII	GTNAC	2 cut(s)	761, 907
MalI	GATC	2 cut(s)	476, 818
MboI	GATC	2 cut(s)	474, 816
MboII	GAAGA	1 cut(s)	939
MfeI	CAATTG	1 cut(s)	321
MflI	RGATCY	1 cut(s)	816
MhlI	GDGCHC	3 cut(s)	178, 192, 244
MluCI	AATT	8 cut(s)	143, 208, 287, 321, 376, 386, 784, 891
MlyI	GAGTC	2 cut(s)	483, 625
MmeI	TCCRAC	2 cut(s)	307, 466
MseI	TTAA	1 cut(s)	359
MspA1I	CMGCKG	1 cut(s)	776
MspI	CCGG	3 cut(s)	495, 573, 853
MspR9I	CCNGG	3 cut(s)	77, 119, 853
MunI	CAATTG	1 cut(s)	321
MvaI	CCWGG	2 cut(s)	77, 119
MvnI	CGCG	1 cut(s)	858
MwoI	GCNNNNNNNGC	2 cut(s)	248, 699
NciI	CCSGG	1 cut(s)	853
NdeII	GATC	2 cut(s)	474, 816
NlaIII	CATG	2 cut(s)	85, 173
NlaIV	GGNNCC	1 cut(s)	508
PagI	TCATGA	1 cut(s)	81
PceI	AGGCCT	1 cut(s)	352
PfeI	GAWTC	1 cut(s)	848
PinAI	ACCGGT	1 cut(s)	494
PkrI	GCNGC	2 cut(s)	103, 860
PleI	GAGTC	2 cut(s)	483, 624
PpsI	GAGTC	2 cut(s)	483, 624
PpuMI	RGGWCCY	1 cut(s)	900
Psp1406I	AACGTT	1 cut(s)	765
Psp5II	RGGWCCY	1 cut(s)	900
Psp6I	CCWGG	2 cut(s)	75, 117
PspFI	CCCAGC	1 cut(s)	688
PspGI	CCWGG	2 cut(s)	75, 117
PspN4I	GGNNCC	1 cut(s)	508
PspPI	GGNCC	2 cut(s)	224, 900
PspPPI	RGGWCCY	1 cut(s)	900
PsuI	RGATCY	1 cut(s)	816
RsaI	GTAC	2 cut(s)	726, 833
RsaNI	GTAC	2 cut(s)	725, 832
SaqAI	TTAA	1 cut(s)	359
SatI	GCNGC	2 cut(s)	102, 859
Sau3AI	GATC	2 cut(s)	474, 816
Sau96I	GGNCC	2 cut(s)	224, 900
SchI	GAGTC	2 cut(s)	483, 625
ScrFI	CCNGG	3 cut(s)	77, 119, 853
SduI	GDGCHC	3 cut(s)	178, 192, 244
SexAI	ACCWGGT	1 cut(s)	117
SfaNI	GCATC	4 cut(s)	473, 560, 571, 726
SinI	GGWCC	2 cut(s)	224, 900
SmlI	CTYRAG	2 cut(s)	216, 873
SmoI	CTYRAG	2 cut(s)	216, 873
Sse9I	AATT	8 cut(s)	143, 208, 287, 321, 376, 386, 784, 891
SseBI	AGGCCT	1 cut(s)	352
SsiI	CCGC	6 cut(s)	227, 525, 776, 823, 858, 861
SspMI	CTAG	1 cut(s)	937
StuI	AGGCCT	1 cut(s)	352
StyD4I	CCNGG	3 cut(s)	75, 117, 851
StyI	CCWWGG	1 cut(s)	347
TaaI	ACNGT	6 cut(s)	334, 448, 603, 625, 646, 913
TaiI	ACGT	3 cut(s)	486, 768, 909
TaqI	TCGA	3 cut(s)	192, 258, 282
TasI	AATT	8 cut(s)	143, 208, 287, 321, 376, 386, 784, 891
TauI	GCSGC	1 cut(s)	861
TfiI	GAWTC	1 cut(s)	848
Tru1I	TTAA	1 cut(s)	359
Tru9I	TTAA	1 cut(s)	359
TscAI	CASTG	3 cut(s)	118, 408, 591
TseI	GCWGC	1 cut(s)	101
TspDTI	ATGAA	3 cut(s)	621, 726, 861
TspGWI	ACGGA	1 cut(s)	849
TspRI	CASTG	3 cut(s)	118, 408, 591
VpaK11BI	GGWCC	2 cut(s)	224, 900
XapI	RAATTY	6 cut(s)	143, 208, 287, 376, 386, 784
XspI	CTAG	1 cut(s)	937

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.