Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0000514

Physical Location & Seq

Genomic Coordinates Forward (+)

15866928 .. 15869009

Gene Structure 2082 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1821 bp

ATGGACGTCCGAAGGCGATCGACGATGGACACACCTGCCACCAAGGCCAGAAGTGGGCCGATGAAAGTGAAAGTGGTGGACCACGAGAACGACGTCGTCGTCGTCGGGGCCAAGGCCTCCGACGCCCTCCCGCTGCCGCTGTACCTGACTAACGCTGTCTTCTTTACTCTCTTCTTCTCCGTCGTCTACTTCCTCCTCACTCGGTGGCGCGAGAAGATCAGGACCTCCACGCCGCTCCACGTCGTGGACCTCTCCGAGATCGTCGCGATAGTCGCGTTCGTCGCCTCCTTCATCTACTTGCTCGGATTCTTCGGGATCGATTTCGTGCAGTCGCTCATTCTCCGCCCCAGCAACGACGTCTGGGCTGCCGAAGATGAGGAGGAGCACGAGCGCTTGATTTTGAAAGACGACGCACGGAAAGTGCCGTGTGGGGCAGGGCTCGACTGCAGCCCAATTCCCCAAATTGCCCCTGTTGCTGCCGCCCCCAAAGCTGTTGCACAGAAGGTGTTTGATAAAGAGGTAGTCCTCTCCACTCCCTGCGATTTCACCACCCAGCCGTTGACGGAGGAAGATGAGGAGGTGGTCAAGTCCGTCGTGGCGGGAACCATCCCTTCGTACTCTCTGGAGTCAAAGCTCGGAGATTGCAAGAGGGCGGCAGCTATCAGGCGCGAGGCGCTGCAGAGGATTACTGGGAAGTCTCTCACTGGTCTGCCATTGGAGGGTTTCGATTACGAGTCAATTTTGGGTCAGTGCTGCGAGATGCCAGTTGGGTACGTTCAGATTCCGGTTGGGATTGCCGGGCCTCTTATGCTCGACGGCAGAGAGTTCTCCGTGCCAATGGCCACCACCGAAGGTTGCTTGGTTGCCAGCACCAACCGTGGCTGCAAAGCTATCAACTTGTCCGGCGGAGCCACCAGTGTGTTGCTGAGAGATGGGATGACCAGAGCGCCTTGTGTGAGGTTCAACTCTGCTAAGAGAGCTGCCGAGTTGAAGTTCTACTTGGAAGACCCCAACAATTATGACACCTTGTCCACGGTTTTCAACAGGTCGAGCAGATTCGGTAGGCTTCAGACAATTAAGTGTGCCATTGCTGGGAAGAACTTGTACATGAGATTCACCTGCAGCACTGGTGATGCTATGGGAATGAACATGGTCTCCAAAGGTGTGCAAAACGTTTTGGATTTCCTCCAGAACGACTTCCCTGACATGGATGTGATTGGAATTTCGGGCAACTACTGCTCAGACAAGAAGCCCGCTGCAGTGAACTGGATCGAAGGCCGCGGCAAGTCAGTGGTCTGCGAGGCTGTGATCAAGGGCGATGTGGTGCAGAAGGTGTTGAAAACCAACGTGGCGTCCCTCTGTGAACTTAACATGCTCAAGAACCTTACTGGGTCTGCAATGGCTGGAGCTCTCGGTGGCTTCAATGCACATGCCAGCAACATCGTCTCTGCAATCTACATCGCCACCGGCCAAGACCCAGCTCAGAATGTGGAGAGTTCTCACTGCATTACCATGATGGAACCCATCAACGATGGAAAGGACCTTCACGTGTCTGTCACCATGCCTTCCATTGAGGTTGGTACGGTTGGAGGTGGGACGCAGCTTGCATCGCAGTCAGCTTGCCTGAACCTGCTCGGAGTGAAGGGTGCTAACAGAGAGGCACCAGGATCAAATGCAAGATTGTTGGCCACTGTTGTGGCTGGTTCTGTTCTTGCTGGAGAGCTTTCTCTCATGTCTGCTATTTCAGCTGGACAGCTTGTGAAAAGTCACATGAAATACAACAGATCAAGCAAAGATGTCTCAGCTGTTGCATCCGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004420 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005777 GO:0005778 GO:0005783 GO:0005789 GO:0006629 GO:0006694 GO:0006720 GO:0006721 GO:0006722 GO:0008150 GO:0008152 GO:0008202 GO:0008299 GO:0008610 GO:0009058 GO:0009526 GO:0009536 GO:0009987 GO:0012505 GO:0016020 GO:0016104 GO:0016114 GO:0016125 GO:0016126 GO:0016491 GO:0016614 GO:0016616 GO:0031090 GO:0031903 GO:0031966 GO:0031967 GO:0031975 GO:0031984 GO:0042170 GO:0042175 GO:0042282 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044432 GO:0044435 GO:0044438 GO:0044439 GO:0044444 GO:0044446 GO:0044464 GO:0055114 GO:0071704 GO:0098588 GO:0098805 GO:0098827 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00900 ko01100 ko01110 ko01130 ko04152 ko04976 map00900 map01100 map01110 map01130 map04152 map04976

Pfam Domains

Protein Families

HMG-CoA_red

Protein Analysis

607

Amino Acids

64.8

Weight (kDa)

6.43

Isoelectric Point (pI)

34.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HMG-CoA_red	PF00368	219 - 595	1e-145	Hydroxymethylglutaryl-coenzyme A reductase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000514)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17370
fragaria_vesca	FvH4_2g17051 FvH4_2g17060 FvH4_2g17080 FvH4_2g17090 FvH4_2g17100 FvH4_2g17100 FvH4_2g17100 FvH4_2g17100
malus_domestica	MD05G1143500.v1.1 MD10G1143400.v1.1
prunus_persica	Prupe.8G182300_v2.0.a1
pyrus_communis	pycom05g13820 pycom10g12350
rosa_chinensis	RchiOBHm_Chr6g0281271 RchiOBHm_Chr6g0281291 RchiOBHm_Chr6g0281321 RchiOBHm_Chr6g0281411 RchiOBHm_Chr6g0281421 RchiOBHm_Chr6g0281471 RchiOBHm_Chr6g0281491 RchiOBHm_Chr6g0281521
rosa_laevigata	RLG00000012968 RLG00000012970 RLG00000012971 RLG00000012973 RLG00000012974 RLG00000012978 RLG00000012980
rosa_multiflora	Rmu_co8270795.1_g000001 Rmu_co8461535.1_g000001 Rmu_sc0000847.1_g000006 Rmu_sc0000847.1_g000012 Rmu_sc0000847.1_g000019 Rmu_sc0000847.1_g000036 Rmu_sc0000847.1_g000045 Rmu_sc0000847.1_g000047 Rmu_sc0001710.1_g000007 Rmu_sc0001710.1_g000011
rosa_roxburghii	Rroxscaffold_7G00187040 Rroxscaffold_7G00187050 Rroxscaffold_7G00187090 Rroxscaffold_7G00187130 Rroxscaffold_7G00187160 Rroxscaffold_7G00187180
rosa_rugosa	Rorug06G0140200 Rorug06G0140400 Rorug06G0140700 Rorug06G0140800 Rorug06G0140900 Rorug06G0141000 Rorug06G0141100
rosa_samantha	Rh6AG252000 Rh6AG252200 Rh6AG252300 Rh6AG252600 Rh6AG252900 Rh6AG253000 Rh6AG253400 Rh6AG253500 Rh6BG255400 Rh6BG255700 Rh6BG255800 Rh6BG256000 Rh6BG256400 Rh6BG256600 Rh6CG254800 Rh6CG254900 Rh6CG255200 Rh6CG255400 Rh6CG255500 Rh6DG246600 Rh6DG246800 Rh6DG247000 Rh6DG247200 Rh6DG247500 Rh6DG247600 Rh6DG247700
rosa_wichuraiana	Rw6G021890 Rw6G021910 Rw6G021940 Rw6G021980 Rw6G022000 Rw6G022010 Rw6G022020 Rw6G022030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	43, 1127
AasI	GACNNNNNNGTC	1 cut(s)	98
AatII	GACGTC	3 cut(s)	9, 96, 360
Acc36I	ACCTGC	3 cut(s)	43, 1127, 1638
AccB1I	GGYRCC	1 cut(s)	1660
AccB7I	CCANNNNNTGG	1 cut(s)	244
AccBSI	CCGCTC	1 cut(s)	235
AccI	GTMKAC	1 cut(s)	186
AccII	CGCG	5 cut(s)	210, 266, 275, 669, 1281
AclI	AACGTT	1 cut(s)	1173
AclWI	GGATC	3 cut(s)	323, 1277, 1675
AcoI	YGGCCR	3 cut(s)	840, 1468, 1686
AcsI	RAATTY	1 cut(s)	1221
AcuI	CTGAAG	1 cut(s)	1052
AcvI	CACGTG	1 cut(s)	1549
AcyI	GRCGYC	5 cut(s)	6, 93, 123, 357, 1352
AdeI	CACNNNGTG	2 cut(s)	204, 244
AfaI	GTAC	5 cut(s)	143, 617, 773, 1106, 1582
AfeI	AGCGCT	1 cut(s)	392
AfiI	CCNNNNNNNGG	5 cut(s)	54, 244, 719, 1092, 1207
AflIII	ACRYGT	1 cut(s)	1548
AgsI	TTSAA	6 cut(s)	403, 964, 991, 1042, 1339, 1423
AhdI	GACNNNNNGTC	1 cut(s)	1027
AjiI	CACGTC	1 cut(s)	241
AjnI	CCWGG	1 cut(s)	1663
AjuI	GAANNNNNNNTTGG	2 cut(s)	983, 1015
AleI	CACNNNNGTG	2 cut(s)	917, 1694
AloI	GAACNNNNNNTCC	2 cut(s)	1139, 1171
Alw21I	GWGCWC	2 cut(s)	387, 1411
Alw26I	GTCTC	4 cut(s)	702, 1159, 1450, 1804
AlwI	GGATC	3 cut(s)	323, 1277, 1675
Aor51HI	AGCGCT	1 cut(s)	392
AoxI	GGCC	9 cut(s)	45, 56, 108, 114, 800, 840, 1276, 1468, 1686
ApoI	RAATTY	1 cut(s)	1221
Asp700I	GAANNNNTTC	1 cut(s)	1196
AspLEI	GCGC	5 cut(s)	210, 393, 669, 676, 949
AspS9I	GGNCC	7 cut(s)	56, 79, 108, 222, 247, 800, 1540
AsuC2I	CCSGG	1 cut(s)	799
AsuHPI	GGTGA	4 cut(s)	538, 1108, 1142, 1549
AvaII	GGWCC	4 cut(s)	79, 222, 247, 1540
BalI	TGGCCA	2 cut(s)	842, 1688
BanI	GGYRCC	1 cut(s)	1660
BanII	GRGCYC	2 cut(s)	441, 1411
BarI	GAAGNNNNNNTAC	2 cut(s)	1088, 1120
BauI	CACGAG	2 cut(s)	83, 386
BbrPI	CACGTG	1 cut(s)	1549
BbsI	GAAGAC	2 cut(s)	151, 1011
Bbv12I	GWGCWC	2 cut(s)	387, 1411
BccI	CCATC	6 cut(s)	19, 614, 926, 1510, 1526, 1532
BceAI	ACGGC	3 cut(s)	409, 541, 832
BciT130I	CCWGG	1 cut(s)	1665
BclI	TGATCA	1 cut(s)	1308
BcnI	CCSGG	1 cut(s)	799
BcoDI	GTCTC	4 cut(s)	702, 1159, 1450, 1804
BfmI	CTRYAG	4 cut(s)	445, 677, 1120, 1257
BfoI	RGCGCY	3 cut(s)	394, 677, 950
BfuAI	ACCTGC	3 cut(s)	43, 1127, 1638
BglI	GCCNNNNNGGC	1 cut(s)	44
Bme1390I	CCNGG	2 cut(s)	799, 1665
Bme18I	GGWCC	4 cut(s)	79, 222, 247, 1540
BmeRI	GACNNNNNGTC	1 cut(s)	1027
BmgBI	CACGTC	1 cut(s)	241
BmgT120I	GGNCC	7 cut(s)	56, 79, 108, 222, 247, 800, 1540
BmiI	GGNNCC	5 cut(s)	109, 604, 910, 1521, 1662
BmrFI	CCNGG	2 cut(s)	799, 1665
BmrI	ACTGGG	2 cut(s)	699, 1398
BmsI	GCATC	3 cut(s)	750, 1123, 1616
BmuI	ACTGGG	2 cut(s)	699, 1398
BpiI	GAAGAC	2 cut(s)	151, 1011
BpmI	CTGGAG	4 cut(s)	644, 1172, 1425, 1737
BpuEI	CTTGAG	1 cut(s)	1361
BpuMI	CCSGG	1 cut(s)	799
Bsa29I	ATCGAT	1 cut(s)	318
BsaAI	YACGTR	1 cut(s)	1549
BsaHI	GRCGYC	5 cut(s)	6, 93, 123, 357, 1352
BsaI	GGTCTC	1 cut(s)	1159
BsaJI	CCNNGG	5 cut(s)	42, 111, 877, 1032, 1279
BsaWI	WCCGGW	1 cut(s)	784
BsaXI	ACNNNNNCTCC	2 cut(s)	1139, 1169
Bsc4I	CCNNNNNNNGG	5 cut(s)	54, 244, 719, 1092, 1207
Bse118I	RCCGGY	1 cut(s)	1466
Bse1I	ACTGG	7 cut(s)	694, 709, 764, 915, 1132, 1271, 1393
Bse3DI	GCAATG	2 cut(s)	1086, 1404
BseBI	CCWGG	1 cut(s)	1665
BseCI	ATCGAT	1 cut(s)	318
BseDI	CCNNGG	5 cut(s)	42, 111, 877, 1032, 1279
BseGI	GGATG	4 cut(s)	606, 942, 1216, 1811
BseLI	CCNNNNNNNGG	5 cut(s)	54, 244, 719, 1092, 1207
BseMI	GCAATG	2 cut(s)	1086, 1404
BseMII	CTCAG	4 cut(s)	917, 1254, 1496, 1815
BseNI	ACTGG	7 cut(s)	694, 709, 764, 915, 1132, 1271, 1393
BseRI	GAGGAG	4 cut(s)	185, 392, 395, 590
BseYI	CCCAGC	4 cut(s)	347, 552, 1091, 1477
BsgI	GTGCAG	2 cut(s)	347, 1346
Bsh1236I	CGCG	5 cut(s)	210, 266, 275, 669, 1281
Bsh1285I	CGRYCG	1 cut(s)	20
BshFI	GGCC	9 cut(s)	47, 58, 110, 116, 802, 842, 1278, 1470, 1688
BshNI	GGYRCC	1 cut(s)	1660
BshVI	ATCGAT	1 cut(s)	318
BsiEI	CGRYCG	1 cut(s)	20
BsiHKAI	GWGCWC	2 cut(s)	387, 1411
BsiSI	CCGG	4 cut(s)	785, 798, 903, 1467
BslFI	GGGAC	2 cut(s)	1339, 1609
BslI	CCNNNNNNNGG	5 cut(s)	54, 244, 719, 1092, 1207
BsmAI	GTCTC	4 cut(s)	702, 1159, 1450, 1804
BsmBI	CGTCTC	1 cut(s)	1450
BsmFI	GGGAC	2 cut(s)	1339, 1609
BsnI	GGCC	9 cut(s)	47, 58, 110, 116, 802, 842, 1278, 1470, 1688
Bso31I	GGTCTC	1 cut(s)	1159
Bsp1286I	GDGCHC	3 cut(s)	387, 441, 1411
Bsp1407I	TGTACA	1 cut(s)	1104
Bsp143I	GATC	8 cut(s)	17, 216, 258, 315, 1269, 1308, 1667, 1784
Bsp68I	TCGCGA	1 cut(s)	266
BspANI	GGCC	9 cut(s)	47, 58, 110, 116, 802, 842, 1278, 1470, 1688
BspCNI	CTCAG	4 cut(s)	918, 1253, 1495, 1814
BspDI	ATCGAT	1 cut(s)	318
BspFNI	CGCG	5 cut(s)	210, 266, 275, 669, 1281
BspLI	GGNNCC	5 cut(s)	109, 604, 910, 1521, 1662
BspMAI	CTGCAG	4 cut(s)	449, 681, 1124, 1261
BspMI	ACCTGC	3 cut(s)	43, 1127, 1638
BspPI	GGATC	3 cut(s)	323, 1277, 1675
BspT107I	GGYRCC	1 cut(s)	1660
BspTNI	GGTCTC	1 cut(s)	1159
BsrBI	CCGCTC	1 cut(s)	235
BsrDI	GCAATG	2 cut(s)	1086, 1404
BsrFI	RCCGGY	1 cut(s)	1466
BsrGI	TGTACA	1 cut(s)	1104
BsrI	ACTGG	7 cut(s)	694, 709, 764, 915, 1132, 1271, 1393
BssAI	RCCGGY	1 cut(s)	1466
BssECI	CCNNGG	5 cut(s)	42, 111, 877, 1032, 1279
BssMI	GATC	8 cut(s)	17, 216, 258, 315, 1269, 1308, 1667, 1784
BssNI	GRCGYC	5 cut(s)	6, 93, 123, 357, 1352
BssSI	CACGAG	2 cut(s)	83, 386
BssT1I	CCWWGG	2 cut(s)	42, 111
Bst2BI	CACGAG	2 cut(s)	83, 386
Bst2UI	CCWGG	1 cut(s)	1665
Bst4CI	ACNGT	4 cut(s)	878, 1036, 1585, 1693
Bst6I	CTCTTC	1 cut(s)	176
BstACI	GRCGYC	5 cut(s)	6, 93, 123, 357, 1352
BstAPI	GCANNNNNTGC	1 cut(s)	1236
BstAUI	TGTACA	1 cut(s)	1104
BstBAI	YACGTR	1 cut(s)	1549
BstC8I	GCNNGC	5 cut(s)	868, 1254, 1435, 1605, 1621
BstDEI	CTNAG	5 cut(s)	926, 972, 1240, 1482, 1801
BstDSI	CCRYGG	3 cut(s)	877, 1032, 1279
BstF5I	GGATG	4 cut(s)	606, 942, 1216, 1811
BstFNI	CGCG	5 cut(s)	210, 266, 275, 669, 1281
BstH2I	RGCGCY	3 cut(s)	394, 677, 950
BstHHI	GCGC	5 cut(s)	210, 393, 669, 676, 949
BstKTI	GATC	8 cut(s)	20, 219, 261, 318, 1272, 1311, 1670, 1787
BstMAI	GTCTC	4 cut(s)	702, 1159, 1450, 1804
BstMBI	GATC	8 cut(s)	17, 216, 258, 315, 1269, 1308, 1667, 1784
BstMCI	CGRYCG	1 cut(s)	20
BstNI	CCWGG	1 cut(s)	1665
BstNSI	RCATGY	2 cut(s)	1375, 1433
BstSCI	CCNGG	2 cut(s)	797, 1663
BstSFI	CTRYAG	4 cut(s)	445, 677, 1120, 1257
BstUI	CGCG	5 cut(s)	210, 266, 275, 669, 1281
BstV2I	GAAGAC	2 cut(s)	151, 1011
BstXI	CCANNNNNNTGG	1 cut(s)	1696
Bsu15I	ATCGAT	1 cut(s)	318
BsuRI	GGCC	9 cut(s)	47, 58, 110, 116, 802, 842, 1278, 1470, 1688
BsuTUI	ATCGAT	1 cut(s)	318
BtgI	CCRYGG	3 cut(s)	877, 1032, 1279
BtgZI	GCGATG	3 cut(s)	1332, 1444, 1593
BtrI	CACGTC	1 cut(s)	241
BtsCI	GGATG	4 cut(s)	606, 942, 1216, 1811
BtsI	GCAGTG	2 cut(s)	1266, 1501
BtsIMutI	CAGTG	8 cut(s)	702, 755, 922, 1125, 1266, 1296, 1501, 1689
BtuMI	TCGCGA	1 cut(s)	266
BveI	ACCTGC	3 cut(s)	43, 1127, 1638
Cac8I	GCNNGC	5 cut(s)	868, 1254, 1435, 1605, 1621
CfoI	GCGC	5 cut(s)	210, 393, 669, 676, 949
Cfr10I	RCCGGY	1 cut(s)	1466
Cfr13I	GGNCC	7 cut(s)	56, 79, 108, 222, 247, 800, 1540
Cfr42I	CCGCGG	1 cut(s)	1282
ClaI	ATCGAT	1 cut(s)	318
CseI	GACGC	4 cut(s)	131, 419, 1341, 1606
Csp6I	GTAC	5 cut(s)	142, 616, 772, 1105, 1581
CviAII	CATG	9 cut(s)	1108, 1150, 1207, 1372, 1430, 1513, 1561, 1732, 1771
CviQI	GTAC	5 cut(s)	142, 616, 772, 1105, 1581
DdeI	CTNAG	5 cut(s)	926, 972, 1240, 1482, 1801
DpnI	GATC	8 cut(s)	19, 218, 260, 317, 1271, 1310, 1669, 1786
DpnII	GATC	8 cut(s)	17, 216, 258, 315, 1269, 1308, 1667, 1784
DraIII	CACNNNGTG	2 cut(s)	204, 244
DrdI	GACNNNNNNGTC	1 cut(s)	98
DriI	GACNNNNNGTC	1 cut(s)	1027
DseDI	GACNNNNNNGTC	1 cut(s)	98
EaeI	YGGCCR	3 cut(s)	840, 1468, 1686
Eam1104I	CTCTTC	1 cut(s)	176
Eam1105I	GACNNNNNGTC	1 cut(s)	1027
EarI	CTCTTC	1 cut(s)	176
EciI	GGCGGA	2 cut(s)	332, 921
Ecl136II	GAGCTC	1 cut(s)	1409
Eco130I	CCWWGG	2 cut(s)	42, 111
Eco147I	AGGCCT	1 cut(s)	116
Eco24I	GRGCYC	2 cut(s)	441, 1411
Eco31I	GGTCTC	1 cut(s)	1159
Eco47I	GGWCC	4 cut(s)	79, 222, 247, 1540
Eco47III	AGCGCT	1 cut(s)	392
Eco53kI	GAGCTC	1 cut(s)	1409
Eco57I	CTGAAG	1 cut(s)	1052
Eco72I	CACGTG	1 cut(s)	1549
EcoICRI	GAGCTC	1 cut(s)	1409
EcoO109I	RGGNCCY	2 cut(s)	222, 1540
EcoRII	CCWGG	1 cut(s)	1663
EcoT14I	CCWWGG	2 cut(s)	42, 111
EcoT38I	GRGCYC	2 cut(s)	441, 1411
ErhI	CCWWGG	2 cut(s)	42, 111
Esp3I	CGTCTC	1 cut(s)	1450
FaeI	CATG	9 cut(s)	1111, 1153, 1210, 1375, 1433, 1516, 1564, 1735, 1774
FalI	AAGNNNNNCTT	2 cut(s)	983, 1015
FaqI	GGGAC	2 cut(s)	1339, 1609
FatI	CATG	9 cut(s)	1107, 1149, 1206, 1371, 1429, 1512, 1560, 1731, 1770
FauI	CCCGC	3 cut(s)	138, 592, 1261
FbaI	TGATCA	1 cut(s)	1308
FblI	GTMKAC	1 cut(s)	186
FokI	GGATG	4 cut(s)	593, 949, 1223, 1798
FriOI	GRGCYC	2 cut(s)	441, 1411
GlaI	GCGC	5 cut(s)	209, 392, 668, 675, 948
GsaI	CCCAGC	4 cut(s)	351, 556, 1095, 1481
GsuI	CTGGAG	4 cut(s)	644, 1172, 1425, 1737
HaeII	RGCGCY	3 cut(s)	394, 677, 950
HaeIII	GGCC	9 cut(s)	47, 58, 110, 116, 802, 842, 1278, 1470, 1688
HapII	CCGG	4 cut(s)	785, 798, 903, 1467
HgaI	GACGC	4 cut(s)	131, 419, 1341, 1606
HhaI	GCGC	5 cut(s)	210, 393, 669, 676, 949
Hin1I	GRCGYC	5 cut(s)	6, 93, 123, 357, 1352
Hin1II	CATG	9 cut(s)	1111, 1153, 1210, 1375, 1433, 1516, 1564, 1735, 1774
Hin6I	GCGC	5 cut(s)	208, 391, 667, 674, 947
HinP1I	GCGC	5 cut(s)	208, 391, 667, 674, 947
HincII	GTYRAC	1 cut(s)	561
HindII	GTYRAC	1 cut(s)	561
HinfI	GANTC	6 cut(s)	306, 626, 734, 781, 1056, 1113
HpaII	CCGG	4 cut(s)	785, 798, 903, 1467
HphI	GGTGA	4 cut(s)	538, 1108, 1142, 1549
Hpy166II	GTNNAC	7 cut(s)	79, 187, 247, 561, 1032, 1264, 1364
Hpy188III	TCNNGA	6 cut(s)	220, 265, 313, 623, 1189, 1378
Hpy8I	GTNNAC	7 cut(s)	79, 187, 247, 561, 1032, 1264, 1364
HpyCH4III	ACNGT	4 cut(s)	878, 1036, 1585, 1693
HpyCH4IV	ACGT	8 cut(s)	6, 93, 240, 357, 774, 1173, 1347, 1548
HpyF3I	CTNAG	5 cut(s)	926, 972, 1240, 1482, 1801
HpySE526I	ACGT	8 cut(s)	6, 93, 240, 357, 774, 1173, 1347, 1548
Hsp92I	GRCGYC	5 cut(s)	6, 93, 123, 357, 1352
Hsp92II	CATG	9 cut(s)	1111, 1153, 1210, 1375, 1433, 1516, 1564, 1735, 1774
HspAI	GCGC	5 cut(s)	208, 391, 667, 674, 947
Ksp22I	TGATCA	1 cut(s)	1308
KspI	CCGCGG	1 cut(s)	1282
Kzo9I	GATC	8 cut(s)	17, 216, 258, 315, 1269, 1308, 1667, 1784
LmnI	GCTCC	4 cut(s)	240, 382, 908, 1406
LweI	GCATC	3 cut(s)	750, 1123, 1616
MaeII	ACGT	8 cut(s)	6, 93, 240, 357, 774, 1173, 1347, 1548
MaeIII	GTNAC	2 cut(s)	1555, 1766
MalI	GATC	8 cut(s)	19, 218, 260, 317, 1271, 1310, 1669, 1786
MbiI	CCGCTC	1 cut(s)	235
MboI	GATC	8 cut(s)	17, 216, 258, 315, 1269, 1308, 1667, 1784
MboII	GAAGA	9 cut(s)	151, 163, 166, 226, 301, 383, 581, 1016, 1108
MhlI	GDGCHC	3 cut(s)	387, 441, 1411
MlsI	TGGCCA	2 cut(s)	842, 1688
MluCI	AATT	6 cut(s)	453, 462, 738, 1015, 1074, 1221
MluNI	TGGCCA	2 cut(s)	842, 1688
MlyI	GAGTC	2 cut(s)	635, 743
MmeI	TCCRAC	2 cut(s)	144, 1567
Mox20I	TGGCCA	2 cut(s)	842, 1688
MroXI	GAANNNNTTC	1 cut(s)	1196
MscI	TGGCCA	2 cut(s)	842, 1688
MseI	TTAA	3 cut(s)	1077, 1368, 1819
MslI	CAYNNNNRTG	4 cut(s)	917, 1211, 1511, 1694
Msp20I	TGGCCA	2 cut(s)	842, 1688
MspA1I	CMGCKG	6 cut(s)	133, 139, 1256, 1281, 1748, 1805
MspI	CCGG	4 cut(s)	785, 798, 903, 1467
MspR9I	CCNGG	2 cut(s)	799, 1665
MvaI	CCWGG	1 cut(s)	1665
MvnI	CGCG	5 cut(s)	210, 266, 275, 669, 1281
NciI	CCSGG	1 cut(s)	799
NdeII	GATC	8 cut(s)	17, 216, 258, 315, 1269, 1308, 1667, 1784
NlaIII	CATG	9 cut(s)	1111, 1153, 1210, 1375, 1433, 1516, 1564, 1735, 1774
NlaIV	GGNNCC	5 cut(s)	109, 604, 910, 1521, 1662
NmeAIII	GCCGAG	1 cut(s)	1009
NmuCI	GTSAC	2 cut(s)	1555, 1766
NruI	TCGCGA	1 cut(s)	266
NspI	RCATGY	2 cut(s)	1375, 1433
OliI	CACNNNNGTG	2 cut(s)	917, 1694
PaqCI	CACCTGC	2 cut(s)	43, 1127
PceI	AGGCCT	1 cut(s)	116
PcsI	WCGNNNNNNNCGW	3 cut(s)	90, 96, 99
PdmI	GAANNNNTTC	1 cut(s)	1196
PfeI	GAWTC	4 cut(s)	306, 781, 1056, 1113
PflFI	GACNNNGTC	1 cut(s)	95
PflMI	CCANNNNNTGG	1 cut(s)	244
Ple19I	CGATCG	1 cut(s)	20
PleI	GAGTC	2 cut(s)	634, 742
PmaCI	CACGTG	1 cut(s)	1549
PmlI	CACGTG	1 cut(s)	1549
PpsI	GAGTC	2 cut(s)	634, 742
Ppu21I	YACGTR	1 cut(s)	1549
PpuMI	RGGWCCY	2 cut(s)	222, 1540
Psp124BI	GAGCTC	1 cut(s)	1411
Psp1406I	AACGTT	1 cut(s)	1173
Psp5II	RGGWCCY	2 cut(s)	222, 1540
Psp6I	CCWGG	1 cut(s)	1663
PspCI	CACGTG	1 cut(s)	1549
PspFI	CCCAGC	4 cut(s)	347, 552, 1091, 1477
PspGI	CCWGG	1 cut(s)	1663
PspN4I	GGNNCC	5 cut(s)	109, 604, 910, 1521, 1662
PspPI	GGNCC	7 cut(s)	56, 79, 108, 222, 247, 800, 1540
PspPPI	RGGWCCY	2 cut(s)	222, 1540
PstI	CTGCAG	4 cut(s)	449, 681, 1124, 1261
PsyI	GACNNNGTC	1 cut(s)	95
PvuI	CGATCG	1 cut(s)	20
PvuII	CAGCTG	2 cut(s)	1748, 1805
RruI	TCGCGA	1 cut(s)	266
RsaI	GTAC	5 cut(s)	143, 617, 773, 1106, 1582
RsaNI	GTAC	5 cut(s)	142, 616, 772, 1105, 1581
RseI	CAYNNNNRTG	4 cut(s)	917, 1211, 1511, 1694
SacI	GAGCTC	1 cut(s)	1411
SacII	CCGCGG	1 cut(s)	1282
SaqAI	TTAA	3 cut(s)	1077, 1368, 1819
Sau3AI	GATC	8 cut(s)	17, 216, 258, 315, 1269, 1308, 1667, 1784
Sau96I	GGNCC	7 cut(s)	56, 79, 108, 222, 247, 800, 1540
SchI	GAGTC	2 cut(s)	635, 743
ScrFI	CCNGG	2 cut(s)	799, 1665
SduI	GDGCHC	3 cut(s)	387, 441, 1411
SfaNI	GCATC	3 cut(s)	750, 1123, 1616
SfcI	CTRYAG	4 cut(s)	445, 677, 1120, 1257
Sfr303I	CCGCGG	1 cut(s)	1282
SgrBI	CCGCGG	1 cut(s)	1282
SinI	GGWCC	4 cut(s)	79, 222, 247, 1540
SmiMI	CAYNNNNRTG	4 cut(s)	917, 1211, 1511, 1694
SmlI	CTYRAG	1 cut(s)	1376
SmoI	CTYRAG	1 cut(s)	1376
Sse9I	AATT	6 cut(s)	453, 462, 738, 1015, 1074, 1221
SseBI	AGGCCT	1 cut(s)	116
SstI	GAGCTC	1 cut(s)	1411
StuI	AGGCCT	1 cut(s)	116
StyD4I	CCNGG	2 cut(s)	797, 1663
StyI	CCWWGG	2 cut(s)	42, 111
TaaI	ACNGT	4 cut(s)	878, 1036, 1585, 1693
TaiI	ACGT	8 cut(s)	9, 96, 243, 360, 777, 1176, 1350, 1551
TaqI	TCGA	7 cut(s)	20, 318, 441, 726, 813, 1049, 1272
TasI	AATT	6 cut(s)	453, 462, 738, 1015, 1074, 1221
TatI	WGTACW	1 cut(s)	1104
TauI	GCSGC	6 cut(s)	139, 235, 482, 656, 1281, 1284
TfiI	GAWTC	4 cut(s)	306, 781, 1056, 1113
Tru1I	TTAA	3 cut(s)	1077, 1368, 1819
Tru9I	TTAA	3 cut(s)	1077, 1368, 1819
TscAI	CASTG	8 cut(s)	709, 755, 922, 1132, 1266, 1296, 1508, 1696
TseFI	GTSAC	2 cut(s)	1555, 1766
Tsp45I	GTSAC	2 cut(s)	1555, 1766
TspDTI	ATGAA	4 cut(s)	77, 280, 1160, 1787
TspGWI	ACGGA	5 cut(s)	169, 430, 578, 580, 820
TspRI	CASTG	8 cut(s)	709, 755, 922, 1132, 1266, 1296, 1508, 1696
Tth111I	GACNNNGTC	1 cut(s)	95
Van91I	CCANNNNNTGG	1 cut(s)	244
VpaK11BI	GGWCC	4 cut(s)	79, 222, 247, 1540
XapI	RAATTY	1 cut(s)	1221
XceI	RCATGY	2 cut(s)	1375, 1433
XmiI	GTMKAC	1 cut(s)	186
XmnI	GAANNNNTTC	1 cut(s)	1196
ZraI	GACGTC	3 cut(s)	7, 94, 358

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.