Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr14

Orthogroup ID

OG0001896

Physical Location & Seq

Genomic Coordinates Forward (+)

12124166 .. 12127274

Gene Structure 3109 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1911 bp

ATGGACGACACCGCAGCCCCAGCCCCTGTCTCCGACGAGAACCCGAAGGCGAGCCCAGCTCCAATCTCAGGCTGGACCAGCATAGTTAAGAAGCAACCGGAACCAAAGCCCCGAAACCCGGATGCAAACGCTGCAGCCCAAGTCTTGGTGGAGAGCTGCAAGTCCTCCAAGGGCATAGCCATGGCGGTGGTCGACGCCAACGCCATCATTCAAGGCGGAGAGAGCCTCAGCCATTGCGCCGACAAGCTGGTCTCTATCCCGGAAGTCATGGACGAGGTCCGCGACCCCGTTTCCCGCCACCGGCTCGCCTTTCTTCCCTTCGAAGTCCAAACCATGGAACCCTCACCTGAATGCCTCAACAAAGTTATTAAGTTTGCGAGGGCTACCGGGGATTTACAGACGCTTTCGGATGTGGATATTAAGCTCATTGCTCTGACCTATACGTTGGAGGCTCAGATACATGGCACTGAACATCTTAGGGACTGCCCTCCCCCAATGCACACGGTTAATGTGAAGAGGTTGCCAGAGAAGGACTTGCCAGGTTGGGGTAATAATGTGCCCAATTTGGAAGAGTGGGAGGCTCTGGAACATGCTGAAGAGGAGAGGTCGAACCTCAGTTCGAGAATTCTTCCTTTGAAAGATTTAAACTTGAATGGGATTAATTCCGATAGTCGTTCTGTTGATGGCTCTGCAGTGGAAGTTAAAAGTGATGCTCATTCCGAAAATCAGGAGGATAGTGTGGGCACTGAAAGGAGATATAGAAGAAATTTTCCCAAGAAGAAAGAGATAAACATTGAAGGGAAGATGGTTTCTACTGGGATTGATGCGTCCCAAGGACAGTTAGATGATAATGCTGATGACTGGATGCCTGCTGTCAGTCGAAGTACGCATAGGAGGTTTTTGAGAAGAAAAGCTAGGCGCGAGTCTAATGAGGCATTTTCTGAAAAGGATGCTCAAGATGCAGAGGAGGAACCTAGAGGCAAGGATCAATTGTTGCCTGTGGAATCTGAAGAAGCATGTAGTAGAAATGGAATGTTTGAGGTCAGTGAGATAACAAAGACGAAGAATGGTGCTGAAGGCCTGTCTCCAACTCTAAAGCAAGCGATACTGGAAGAAGATTCACTAAGGGCTCCTCAAGAAGGGAAGGATCTCAATGGGGTAGAGTCTAATGATTTCGAAGCAGGGGAAGCTACCGCCGACAATAATGTGAATTTTTCTGTTGAAGGAGATGAAGTTGAAACGATAAATGAAGGGCTAGATCACTTGGAGATCTCAAGTGAGACTAACAAAAGTGTTGATACATCCAGTTTGAATGATGATCATAGTGAGCAGAGCTGGATGCTTAGATCCTTGTCTGAGTCTAGTGTAGCTTGTGTAACTGGTGATTTTGCAATGCAGAATGTTATTCTGCAGATGGGTTTACGGTTGGTGGCACCTGGAGGAATGCAGATCAGACAGCTGCACAGGTGGATTTTGAAGTGCCATGCATGCAATACTGTGACTGCTGAAATTGGGAAAATTTTCTGTCCAAAATGTGGAAATGGCGGTACTTTGCGCAAGGTAGCAGTTACAGTTGGTGAGAATGGCATTGTTATGGCAGCCCGTCGACCTCGATCGATCATATTGCGTGGCACAAGATTTTCACTGCCTCTACCTCAGGGTGGAAGGGATGCCATTTCTAAGAACCCCATTTTACGTGAAGATCAACTCCCACAAAAGTTTCTACATCCAAAGACAAAGAAGAAAGCACACAAGGAGGGAGACGACTTGTTCGCTACCAATGACTTCATCTTCTGCCACCACACCGATAAAAAAGCTCCTTTGCAGCCTCCCATAAGGAAGGCACTAGCCGTTTTCAGTGGACGGAGGAATCCCAACGACAATCATTACTCGCATTCTAAGCATAAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

NOB1_Zn_bind PIN_6

Protein Analysis

637

Amino Acids

70.2

Weight (kDa)

5.66

Isoelectric Point (pI)

58.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PIN_6	PF17146	63 - 149	2.3e-26	PIN domain of ribonuclease
Zn_ribbon_NOB1	PF08772	484 - 555	3e-21	Nin one binding (NOB1) Zn-ribbon like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001896)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G41190
fragaria_vesca	FvH4_5g23090
malus_domestica	MD14G1101800.v1.1
prunus_persica	Prupe.5G097400_v2.0.a1
pyrus_communis	pycom06g07650 pycom14g09860
rosa_chinensis	RchiOBHm_Chr2g0099081 RchiOBHm_Chr7g0179141 RchiOBHm_Chr7g0211871 RchiOBHm_Chr7g0211921 RchiOBHm_Chr7g0211961
rosa_laevigata	RLG00000002953 RLG00000002956 RLG00000005381 RLG00000016846 RLG00000021575
rosa_multiflora	Rmu_sc0000888.1_g000019 Rmu_sc0009005.1_g000003 Rmu_sc0017524.1_g000001 Rmu_sc0018807.1_g000007 Rmu_sc0022966.1_g000001
rosa_roxburghii	Rroxscaffold_2G00143460 Rroxscaffold_3G00247290 Rroxscaffold_3G00247320 Rroxscaffold_3G00274270 Rroxscaffold_3G00274340
rosa_rugosa	Rorug02G0076500 Rorug06G0421300 Rorug07G0129500 Rorug07G0129600
rosa_samantha	Rh2AG125600 Rh2BG128900 Rh2CG129900 Rh2DG130300 Rh7AG020500 Rh7AG262400 Rh7BG020600 Rh7BG255900 Rh7CG021700 Rh7CG278400 Rh7DG021100 Rh7DG268900 Rh7DG269200
rosa_wichuraiana	Rw7G001720 Rw7G022370 Rw7G022390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	248
Acc16I	TGCGCA	1 cut(s)	1556
AccB1I	GGYRCC	1 cut(s)	1432
AccB7I	CCANNNNNTGG	3 cut(s)	145, 334, 1535
AccI	GTMKAC	2 cut(s)	192, 1606
AccII	CGCG	2 cut(s)	282, 921
AciI	CCGC	7 cut(s)	12, 185, 216, 280, 295, 1194, 1545
AclWI	GGATC	3 cut(s)	993, 1155, 1341
AcsI	RAATTY	4 cut(s)	624, 766, 1210, 1518
AcuI	CTGAAG	3 cut(s)	615, 1029, 1095
AcyI	GRCGYC	1 cut(s)	195
AfaI	GTAC	2 cut(s)	886, 1549
AfiI	CCNNNNNNNGG	9 cut(s)	68, 118, 145, 300, 334, 545, 1139, 1535, 1661
AgsI	TTSAA	8 cut(s)	212, 637, 652, 797, 1223, 1238, 1312, 1477
AjnI	CCWGG	2 cut(s)	538, 1435
Alw26I	GTCTC	5 cut(s)	34, 256, 1089, 1274, 1755
AlwI	GGATC	3 cut(s)	993, 1155, 1341
AlwNI	CAGNNNCTG	1 cut(s)	26
AoxI	GGCC	1 cut(s)	1078
ApeKI	GCWGC	7 cut(s)	14, 131, 134, 156, 1459, 1598, 1825
ApoI	RAATTY	4 cut(s)	624, 766, 1210, 1518
ArsI	GACNNNNNNTTYG	2 cut(s)	1754, 1786
AseI	ATTAAT	1 cut(s)	660
Asp700I	GAANNNNTTC	1 cut(s)	1520
AspLEI	GCGC	3 cut(s)	239, 921, 1557
AspS9I	GGNCC	2 cut(s)	75, 277
AsuC2I	CCSGG	3 cut(s)	119, 260, 388
AsuHPI	GGTGA	3 cut(s)	336, 1394, 1589
AsuII	TTCGAA	2 cut(s)	321, 1176
AvaII	GGWCC	2 cut(s)	75, 277
AxyI	CCTNAGG	1 cut(s)	1656
BaeGI	GKGCMC	2 cut(s)	561, 746
BanI	GGYRCC	1 cut(s)	1432
BanII	GRGCYC	2 cut(s)	56, 1132
BbvCI	CCTCAGC	1 cut(s)	227
BbvI	GCAGC	7 cut(s)	26, 118, 143, 146, 1446, 1610, 1837
BccI	CCATC	4 cut(s)	212, 677, 799, 1408
BceAI	ACGGC	1 cut(s)	1835
BcgI	CGANNNNNNTGC	2 cut(s)	1606, 1640
BciT130I	CCWGG	2 cut(s)	540, 1437
BclI	TGATCA	1 cut(s)	1318
BcnI	CCSGG	3 cut(s)	119, 260, 388
BcoDI	GTCTC	5 cut(s)	34, 256, 1089, 1274, 1755
BfaI	CTAG	5 cut(s)	915, 975, 1256, 1362, 1847
BfmI	CTRYAG	3 cut(s)	132, 690, 1409
BglII	AGATCT	1 cut(s)	1269
BisI	GCNGC	7 cut(s)	15, 132, 135, 157, 1460, 1599, 1826
BlsI	GCNGC	7 cut(s)	16, 133, 136, 158, 1461, 1600, 1827
Bme1390I	CCNGG	5 cut(s)	119, 260, 388, 540, 1437
Bme18I	GGWCC	2 cut(s)	75, 277
BmgT120I	GGNCC	2 cut(s)	75, 277
BmiI	GGNNCC	5 cut(s)	102, 339, 972, 1131, 1434
BmrFI	CCNGG	5 cut(s)	119, 260, 388, 540, 1437
BmrI	ACTGGG	1 cut(s)	825
BmsI	GCATC	8 cut(s)	112, 700, 814, 855, 940, 949, 1329, 1660
BmuI	ACTGGG	1 cut(s)	825
BplI	GAGNNNNNCTC	4 cut(s)	43, 75, 210, 242
BpmI	CTGGAG	1 cut(s)	1458
Bpu10I	CCTNAGC	1 cut(s)	227
Bpu14I	TTCGAA	2 cut(s)	321, 1176
BpuEI	CTTGAG	3 cut(s)	939, 1119, 1258
BpuMI	CCSGG	3 cut(s)	119, 260, 388
Bsa29I	ATCGAT	1 cut(s)	1616
BsaAI	YACGTR	1 cut(s)	1697
BsaHI	GRCGYC	1 cut(s)	195
BsaI	GGTCTC	1 cut(s)	256
BsaJI	CCNNGG	5 cut(s)	168, 180, 333, 387, 832
BsaWI	WCCGGW	1 cut(s)	97
BsaXI	ACNNNNNCTCC	2 cut(s)	1218, 1248
Bsc4I	CCNNNNNNNGG	9 cut(s)	68, 118, 145, 300, 334, 545, 1139, 1535, 1661
Bse118I	RCCGGY	1 cut(s)	300
Bse1I	ACTGG	5 cut(s)	820, 866, 1113, 1305, 1384
Bse21I	CCTNAGG	1 cut(s)	1656
Bse3DI	GCAATG	3 cut(s)	232, 426, 1398
BseBI	CCWGG	2 cut(s)	540, 1437
BseCI	ATCGAT	1 cut(s)	1616
BseDI	CCNNGG	5 cut(s)	168, 180, 333, 387, 832
BseGI	GGATG	8 cut(s)	127, 415, 870, 955, 1301, 1344, 1675, 1726
BseLI	CCNNNNNNNGG	9 cut(s)	68, 118, 145, 300, 334, 545, 1139, 1535, 1661
BseMI	GCAATG	3 cut(s)	232, 426, 1398
BseMII	CTCAG	6 cut(s)	81, 241, 467, 628, 1347, 1670
BseNI	ACTGG	5 cut(s)	820, 866, 1113, 1305, 1384
BseRI	GAGGAG	3 cut(s)	614, 980, 1122
BseSI	GKGCMC	2 cut(s)	561, 746
BseXI	GCAGC	7 cut(s)	26, 118, 143, 146, 1446, 1610, 1837
BseYI	CCCAGC	2 cut(s)	19, 55
BsgI	GTGCAG	1 cut(s)	1445
Bsh1236I	CGCG	2 cut(s)	282, 921
Bsh1285I	CGRYCG	1 cut(s)	1616
BshFI	GGCC	1 cut(s)	1080
BshNI	GGYRCC	1 cut(s)	1432
BshVI	ATCGAT	1 cut(s)	1616
BsiEI	CGRYCG	1 cut(s)	1616
BsiSI	CCGG	5 cut(s)	98, 119, 260, 301, 387
BslFI	GGGAC	2 cut(s)	494, 814
BslI	CCNNNNNNNGG	9 cut(s)	68, 118, 145, 300, 334, 545, 1139, 1535, 1661
BsmAI	GTCTC	5 cut(s)	34, 256, 1089, 1274, 1755
BsmBI	CGTCTC	1 cut(s)	1755
BsmFI	GGGAC	2 cut(s)	494, 814
BsmI	GAATGC	3 cut(s)	356, 1449, 1894
BsnI	GGCC	1 cut(s)	1080
Bso31I	GGTCTC	1 cut(s)	256
Bsp119I	TTCGAA	2 cut(s)	321, 1176
Bsp1286I	GDGCHC	4 cut(s)	56, 561, 746, 1132
Bsp19I	CCATGG	2 cut(s)	180, 333
BspACI	CCGC	7 cut(s)	12, 185, 216, 280, 295, 1194, 1545
BspANI	GGCC	1 cut(s)	1080
BspCNI	CTCAG	6 cut(s)	80, 240, 466, 627, 1348, 1669
BspDI	ATCGAT	1 cut(s)	1616
BspFNI	CGCG	2 cut(s)	282, 921
BspLI	GGNNCC	5 cut(s)	102, 339, 972, 1131, 1434
BspMAI	CTGCAG	3 cut(s)	136, 694, 1413
BspPI	GGATC	3 cut(s)	993, 1155, 1341
BspT104I	TTCGAA	2 cut(s)	321, 1176
BspT107I	GGYRCC	1 cut(s)	1432
BspTNI	GGTCTC	1 cut(s)	256
BsrDI	GCAATG	3 cut(s)	232, 426, 1398
BsrFI	RCCGGY	1 cut(s)	300
BsrI	ACTGG	5 cut(s)	820, 866, 1113, 1305, 1384
BssAI	RCCGGY	1 cut(s)	300
BssECI	CCNNGG	5 cut(s)	168, 180, 333, 387, 832
BssNI	GRCGYC	1 cut(s)	195
BssT1I	CCWWGG	4 cut(s)	168, 180, 333, 832
Bst2UI	CCWGG	2 cut(s)	540, 1437
Bst4CI	ACNGT	5 cut(s)	505, 840, 1425, 1498, 1573
Bst6I	CTCTTC	3 cut(s)	509, 564, 591
BstACI	GRCGYC	1 cut(s)	195
BstAPI	GCANNNNNTGC	1 cut(s)	131
BstBAI	YACGTR	1 cut(s)	1697
BstBI	TTCGAA	2 cut(s)	321, 1176
BstC8I	GCNNGC	5 cut(s)	52, 306, 870, 1101, 1489
BstDSI	CCRYGG	2 cut(s)	180, 333
BstENI	CCTNNNNNAGG	1 cut(s)	1137
BstF5I	GGATG	8 cut(s)	127, 415, 870, 955, 1301, 1344, 1675, 1726
BstFNI	CGCG	2 cut(s)	282, 921
BstHHI	GCGC	3 cut(s)	239, 921, 1557
BstMAI	GTCTC	5 cut(s)	34, 256, 1089, 1274, 1755
BstMCI	CGRYCG	1 cut(s)	1616
BstMWI	GCNNNNNNNGC	9 cut(s)	20, 56, 78, 131, 222, 959, 1187, 1488, 1900
BstNI	CCWGG	2 cut(s)	540, 1437
BstNSI	RCATGY	3 cut(s)	593, 1020, 1491
BstSCI	CCNGG	5 cut(s)	117, 258, 386, 538, 1435
BstSFI	CTRYAG	3 cut(s)	132, 690, 1409
BstSLI	GKGCMC	2 cut(s)	561, 746
BstUI	CGCG	2 cut(s)	282, 921
BstV1I	GCAGC	7 cut(s)	26, 118, 143, 146, 1446, 1610, 1837
BstX2I	RGATCY	3 cut(s)	1147, 1269, 1346
BstXI	CCANNNNNNTGG	1 cut(s)	187
BstYI	RGATCY	3 cut(s)	1147, 1269, 1346
Bsu15I	ATCGAT	1 cut(s)	1616
Bsu36I	CCTNAGG	1 cut(s)	1656
BsuRI	GGCC	1 cut(s)	1080
BsuTUI	ATCGAT	1 cut(s)	1616
BtgI	CCRYGG	2 cut(s)	180, 333
BtsCI	GGATG	8 cut(s)	127, 415, 870, 955, 1301, 1344, 1675, 1726
BtsI	GCAGTG	2 cut(s)	699, 1643
BtsIMutI	CAGTG	6 cut(s)	465, 699, 744, 1051, 1643, 1864
Cac8I	GCNNGC	5 cut(s)	52, 306, 870, 1101, 1489
CaiI	CAGNNNCTG	1 cut(s)	26
CfoI	GCGC	3 cut(s)	239, 921, 1557
Cfr10I	RCCGGY	1 cut(s)	300
Cfr13I	GGNCC	2 cut(s)	75, 277
ClaI	ATCGAT	1 cut(s)	1616
CseI	GACGC	3 cut(s)	203, 409, 816
Csp6I	GTAC	2 cut(s)	885, 1548
CviAII	CATG	8 cut(s)	181, 268, 334, 461, 590, 1017, 1484, 1488
CviQI	GTAC	2 cut(s)	885, 1548
DraI	TTTAAA	1 cut(s)	645
DrdI	GACNNNNNNGTC	1 cut(s)	248
DseDI	GACNNNNNNGTC	1 cut(s)	248
Eam1104I	CTCTTC	3 cut(s)	509, 564, 591
EarI	CTCTTC	3 cut(s)	509, 564, 591
EciI	GGCGGA	1 cut(s)	231
Eco130I	CCWWGG	4 cut(s)	168, 180, 333, 832
Eco147I	AGGCCT	1 cut(s)	1080
Eco24I	GRGCYC	2 cut(s)	56, 1132
Eco31I	GGTCTC	1 cut(s)	256
Eco47I	GGWCC	2 cut(s)	75, 277
Eco57I	CTGAAG	3 cut(s)	615, 1029, 1095
Eco81I	CCTNAGG	1 cut(s)	1656
EcoNI	CCTNNNNNAGG	1 cut(s)	1137
EcoRI	GAATTC	1 cut(s)	624
EcoRII	CCWGG	2 cut(s)	538, 1435
EcoT14I	CCWWGG	4 cut(s)	168, 180, 333, 832
EcoT22I	ATGCAT	1 cut(s)	1489
EcoT38I	GRGCYC	2 cut(s)	56, 1132
ErhI	CCWWGG	4 cut(s)	168, 180, 333, 832
Esp3I	CGTCTC	1 cut(s)	1755
FaeI	CATG	8 cut(s)	184, 271, 337, 464, 593, 1020, 1487, 1491
FaqI	GGGAC	2 cut(s)	494, 814
FatI	CATG	8 cut(s)	180, 267, 333, 460, 589, 1016, 1483, 1487
FauI	CCCGC	1 cut(s)	302
FbaI	TGATCA	1 cut(s)	1318
FblI	GTMKAC	2 cut(s)	192, 1606
Fnu4HI	GCNGC	7 cut(s)	15, 132, 135, 157, 1460, 1599, 1826
FokI	GGATG	8 cut(s)	134, 422, 877, 962, 1288, 1351, 1682, 1713
FriOI	GRGCYC	2 cut(s)	56, 1132
Fsp4HI	GCNGC	7 cut(s)	15, 132, 135, 157, 1460, 1599, 1826
FspBI	CTAG	5 cut(s)	915, 975, 1256, 1362, 1847
FspI	TGCGCA	1 cut(s)	1556
GlaI	GCGC	3 cut(s)	238, 920, 1556
GluI	GCNGC	7 cut(s)	15, 132, 135, 157, 1460, 1599, 1826
GsaI	CCCAGC	2 cut(s)	23, 59
GsuI	CTGGAG	1 cut(s)	1458
HaeIII	GGCC	1 cut(s)	1080
HapII	CCGG	5 cut(s)	98, 119, 260, 301, 387
HgaI	GACGC	3 cut(s)	203, 409, 816
HhaI	GCGC	3 cut(s)	239, 921, 1557
Hin1I	GRCGYC	1 cut(s)	195
Hin1II	CATG	8 cut(s)	184, 271, 337, 464, 593, 1020, 1487, 1491
Hin6I	GCGC	3 cut(s)	237, 919, 1555
HinP1I	GCGC	3 cut(s)	237, 919, 1555
HincII	GTYRAC	2 cut(s)	193, 1607
HindII	GTYRAC	2 cut(s)	193, 1607
HinfI	GANTC	6 cut(s)	923, 1004, 1118, 1163, 1358, 1870
HpaII	CCGG	5 cut(s)	98, 119, 260, 301, 387
HphI	GGTGA	3 cut(s)	336, 1394, 1589
Hpy166II	GTNNAC	4 cut(s)	193, 1421, 1607, 1862
Hpy188III	TCNNGA	5 cut(s)	584, 621, 728, 956, 1136
Hpy8I	GTNNAC	4 cut(s)	193, 1421, 1607, 1862
Hpy99I	CGWCG	3 cut(s)	38, 197, 1608
HpyCH4III	ACNGT	5 cut(s)	505, 840, 1425, 1498, 1573
HpyCH4IV	ACGT	2 cut(s)	443, 1696
HpyF10VI	GCNNNNNNNGC	9 cut(s)	20, 56, 78, 131, 222, 959, 1187, 1488, 1900
HpySE526I	ACGT	2 cut(s)	443, 1696
Hsp92I	GRCGYC	1 cut(s)	195
Hsp92II	CATG	8 cut(s)	184, 271, 337, 464, 593, 1020, 1487, 1491
HspAI	GCGC	3 cut(s)	237, 919, 1555
Ksp22I	TGATCA	1 cut(s)	1318
LmnI	GCTCC	3 cut(s)	64, 1135, 1822
Lsp1109I	GCAGC	7 cut(s)	26, 118, 143, 146, 1446, 1610, 1837
LweI	GCATC	8 cut(s)	112, 700, 814, 855, 940, 949, 1329, 1660
MaeI	CTAG	5 cut(s)	915, 975, 1256, 1362, 1847
MaeII	ACGT	2 cut(s)	443, 1696
MaeIII	GTNAC	3 cut(s)	1375, 1498, 1567
MfeI	CAATTG	1 cut(s)	989
MflI	RGATCY	3 cut(s)	1147, 1269, 1346
MhlI	GDGCHC	4 cut(s)	56, 561, 746, 1132
MluCI	AATT	8 cut(s)	562, 624, 661, 766, 989, 1210, 1509, 1518
MlyI	GAGTC	3 cut(s)	932, 1172, 1367
MmeI	TCCRAC	3 cut(s)	57, 426, 1112
Mph1103I	ATGCAT	1 cut(s)	1489
MroXI	GAANNNNTTC	1 cut(s)	1520
MseI	TTAA	7 cut(s)	87, 369, 420, 507, 644, 660, 702
MslI	CAYNNNNRTG	4 cut(s)	179, 185, 349, 1592
MspA1I	CMGCKG	1 cut(s)	1459
MspI	CCGG	5 cut(s)	98, 119, 260, 301, 387
MspR9I	CCNGG	5 cut(s)	119, 260, 388, 540, 1437
MunI	CAATTG	1 cut(s)	989
Mva1269I	GAATGC	3 cut(s)	356, 1449, 1894
MvaI	CCWGG	2 cut(s)	540, 1437
MvnI	CGCG	2 cut(s)	282, 921
MwoI	GCNNNNNNNGC	9 cut(s)	20, 56, 78, 131, 222, 959, 1187, 1488, 1900
NciI	CCSGG	3 cut(s)	119, 260, 388
NcoI	CCATGG	2 cut(s)	180, 333
NlaIII	CATG	8 cut(s)	184, 271, 337, 464, 593, 1020, 1487, 1491
NlaIV	GGNNCC	5 cut(s)	102, 339, 972, 1131, 1434
NmuCI	GTSAC	1 cut(s)	1498
NsbI	TGCGCA	1 cut(s)	1556
NsiI	ATGCAT	1 cut(s)	1489
NspI	RCATGY	3 cut(s)	593, 1020, 1491
NspV	TTCGAA	2 cut(s)	321, 1176
PaeI	GCATGC	1 cut(s)	1491
PceI	AGGCCT	1 cut(s)	1080
PcsI	WCGNNNNNNNCGW	1 cut(s)	279
PctI	GAATGC	3 cut(s)	356, 1449, 1894
PdmI	GAANNNNTTC	1 cut(s)	1520
PfeI	GAWTC	3 cut(s)	1004, 1118, 1870
PflFI	GACNNNGTC	1 cut(s)	275
PflMI	CCANNNNNTGG	3 cut(s)	145, 334, 1535
PfoI	TCCNGGA	1 cut(s)	258
PkrI	GCNGC	7 cut(s)	16, 133, 136, 158, 1461, 1600, 1827
Ple19I	CGATCG	1 cut(s)	1616
PleI	GAGTC	3 cut(s)	931, 1171, 1366
PpsI	GAGTC	3 cut(s)	931, 1171, 1366
Ppu21I	YACGTR	1 cut(s)	1697
PshBI	ATTAAT	1 cut(s)	660
Psp6I	CCWGG	2 cut(s)	538, 1435
PspFI	CCCAGC	2 cut(s)	19, 55
PspGI	CCWGG	2 cut(s)	538, 1435
PspN4I	GGNNCC	5 cut(s)	102, 339, 972, 1131, 1434
PspPI	GGNCC	2 cut(s)	75, 277
PstI	CTGCAG	3 cut(s)	136, 694, 1413
PstNI	CAGNNNCTG	1 cut(s)	26
PsuI	RGATCY	3 cut(s)	1147, 1269, 1346
PsyI	GACNNNGTC	1 cut(s)	275
PvuI	CGATCG	1 cut(s)	1616
PvuII	CAGCTG	1 cut(s)	1459
RsaI	GTAC	2 cut(s)	886, 1549
RsaNI	GTAC	2 cut(s)	885, 1548
RseI	CAYNNNNRTG	4 cut(s)	179, 185, 349, 1592
SalI	GTCGAC	2 cut(s)	191, 1605
SaqAI	TTAA	7 cut(s)	87, 369, 420, 507, 644, 660, 702
SatI	GCNGC	7 cut(s)	15, 132, 135, 157, 1460, 1599, 1826
Sau96I	GGNCC	2 cut(s)	75, 277
SchI	GAGTC	3 cut(s)	932, 1172, 1367
ScrFI	CCNGG	5 cut(s)	119, 260, 388, 540, 1437
SduI	GDGCHC	4 cut(s)	56, 561, 746, 1132
SfaNI	GCATC	8 cut(s)	112, 700, 814, 855, 940, 949, 1329, 1660
SfcI	CTRYAG	3 cut(s)	132, 690, 1409
SfuI	TTCGAA	2 cut(s)	321, 1176
SinI	GGWCC	2 cut(s)	75, 277
SmiMI	CAYNNNNRTG	4 cut(s)	179, 185, 349, 1592
SmlI	CTYRAG	3 cut(s)	954, 1134, 1273
SmoI	CTYRAG	3 cut(s)	954, 1134, 1273
SphI	GCATGC	1 cut(s)	1491
Sse9I	AATT	8 cut(s)	562, 624, 661, 766, 989, 1210, 1509, 1518
SseBI	AGGCCT	1 cut(s)	1080
SsiI	CCGC	7 cut(s)	12, 185, 216, 280, 295, 1194, 1545
SspMI	CTAG	5 cut(s)	915, 975, 1256, 1362, 1847
StuI	AGGCCT	1 cut(s)	1080
StyD4I	CCNGG	5 cut(s)	117, 258, 386, 538, 1435
StyI	CCWWGG	4 cut(s)	168, 180, 333, 832
TaaI	ACNGT	5 cut(s)	505, 840, 1425, 1498, 1573
TaiI	ACGT	2 cut(s)	446, 1699
TaqI	TCGA	9 cut(s)	192, 321, 608, 620, 880, 1176, 1606, 1612, 1616
TasI	AATT	8 cut(s)	562, 624, 661, 766, 989, 1210, 1509, 1518
TfiI	GAWTC	3 cut(s)	1004, 1118, 1870
Tru1I	TTAA	7 cut(s)	87, 369, 420, 507, 644, 660, 702
Tru9I	TTAA	7 cut(s)	87, 369, 420, 507, 644, 660, 702
TscAI	CASTG	6 cut(s)	472, 699, 751, 1051, 1650, 1864
TseFI	GTSAC	1 cut(s)	1498
TseI	GCWGC	7 cut(s)	14, 131, 134, 156, 1459, 1598, 1825
Tsp45I	GTSAC	1 cut(s)	1498
TspDTI	ATGAA	3 cut(s)	1245, 1263, 1777
TspGWI	ACGGA	1 cut(s)	1879
TspRI	CASTG	6 cut(s)	472, 699, 751, 1051, 1650, 1864
Tth111I	GACNNNGTC	1 cut(s)	275
Van91I	CCANNNNNTGG	3 cut(s)	145, 334, 1535
VpaK11BI	GGWCC	2 cut(s)	75, 277
VspI	ATTAAT	1 cut(s)	660
XagI	CCTNNNNNAGG	1 cut(s)	1137
XapI	RAATTY	4 cut(s)	624, 766, 1210, 1518
XceI	RCATGY	3 cut(s)	593, 1020, 1491
XcmI	CCANNNNNNNNNTGG	1 cut(s)	69
XmiI	GTMKAC	2 cut(s)	192, 1606
XmnI	GAANNNNTTC	1 cut(s)	1520
XspI	CTAG	5 cut(s)	915, 975, 1256, 1362, 1847
Zsp2I	ATGCAT	1 cut(s)	1489

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.