pycom17g03580

Senescence-associated carboxylesterase 101-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
OG0000388
Physical Location & Seq
Forward (+)
2401918 .. 2403516
1599 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1272 bp
ATGGAGTTGAATGTTTATTTTTTCACCACGAATCTGGTAGAAAGCAGCAATTCCAACTCATCGATACTTATCACTGGACATTCTTTTGGAGGTTGTGTTGCTGTCCTTTTCACCTTATGGCTGCTACAAAGCCTCAACTTGTCGAAAGCGAAGCGTCCCCTTTGCATCACTTTCGGTTCACCCTTGACCGGTAACGAACAACTCCGACAATGTGTGTTGCAATTCTCAACATGGAGTTCTTGCTTCTTGAATGTAGCCTCTATCAATGATCCTGTACCTAAAGCCTTCCTAACTGCTTCGCAAGCGAGTGATTACAAGCCCTTCGGAACATTCCTATTGTGCTCCGCTTCGGGTGGTTCTTGCTTTGAGGACCCTGATGCCATTTTGCAACTGTTGGTGGAAACCAGCTCTCAGAGTGCTCAAATTCAAGGTCCGAATTTGGGGTTTCAGTACTTCGATTACGGACAGATTTTGAGTGATCTCAAGCTCAAGGCATTTTCTAGAGATGTCTTTGAGTTGGTTGAAGAGGATACAGTTCCACTTAAAGCTGGAATTAAAACACAATTGGCAGCAATATTTGGAGTTGATAGCTCACAGTCATTGCAGCAGCAACAACCCGACATAAATTTCGGCAATCTGATACAAAAGATGGAAACTCAAGAACGTAACCACGTGATCGAGAAGACACAGGTTTATAGTTCTTTCTGGAAATTGAATGAGATTAAAAAGTACATGGTCTACATGGAAGGGTACAAGAAGGAGTCCAAAGAGATAGGAATTGGATACTATGACAGTTACAGAAACAAGCGTTACTCGGGTGAGATTAATGCCGCAGAGTACAAGAAGAAGCTCTCGAATTACTGGGAGGACACGGTTGCAGAAGTTGAGAGCAATCCCCAGAAAGAAGGAGCCGCAATGCGTACTCGTTTCCTATTTGGTGGAACGAATTACAGAAGGATGATCGAACCGCTTCACATTGCAGAGTACTACAAGGAAGGTGGAAAAGATTACATAAAGGAAAGGCCTCGACATTTCGTTCTGTTGGAGCAATGGTTCAATGAAGACGCGGAAAAGAAGAAGCCAGAGAGGGAGCAGAAAGAAAAGGAGAACCCCCAACTGCGTAGCGAAAGCAAGTCAAACTCAAAAGCGAAGAACGTGGCTTCAAGTCTGAATGATGATTCTTGTTTTTGGGTGCATGTCGAGGAAGCGCATATCTTATGCAATGAACAAGCGAGTAATCCAAATGCCAAGCAAATGCTCGATCGAATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Lipase_3

Protein Analysis

424

Amino Acids

48.2

Weight (kDa)

5.85

Isoelectric Point (pI)

49.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lipase_3 PF01764 15 - 96 1.1e-15 Lipase (class 3)
EDS1_EP PF18117 248 - 421 7.2e-43 Enhanced disease susceptibility 1 protein EP domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000388)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G14930 AT5G14930 AT5G14930
fragaria_vesca FvH4_2g18461 FvH4_6g50160 FvH4_6g50160 FvH4_6g50160 FvH4_6g50162
malus_domestica MD01G1017800.v1.1 MD09G1038500.v1.1 MD09G1038700.v1.1 MD09G1039000.v1.1 MD09G1039700.v1.1 MD09G1039800.v1.1 MD17G1039600.v1.1 MD17G1039700.v1.1 MD17G1039800.v1.1 MD17G1039900.v1.1 MD17G1040000.v1.1
prunus_persica Prupe.2G019500_v2.0.a1 Prupe.3G279000_v2.0.a1 Prupe.3G279000_v2.0.a1 Prupe.3G279000_v2.0.a1 Prupe.3G279300_v2.0.a1
pyrus_communis pycom111g03070 pycom17g03570 pycom17g03580
rosa_chinensis RchiOBHm_Chr2g0170411 RchiOBHm_Chr2g0170431 RchiOBHm_Chr2g0170561 RchiOBHm_Chr6g0283951 RchiOBHm_Chr6g0283961 RchiOBHm_Chr6g0283981 RchiOBHm_Chr7g0219521 RchiOBHm_Chr7g0219541
rosa_laevigata RLG00000002285 RLG00000012782 RLG00000012784 RLG00000021954 RLG00000021955 RLG00000021956
rosa_multiflora Rmu_co8245087.1_g000001 Rmu_co8259259.1_g000001 Rmu_sc0003047.1_g000001 Rmu_sc0008697.1_g000004 Rmu_sc0009395.1_g000014 Rmu_sc0009395.1_g000016 Rmu_sc0009395.1_g000019 Rmu_sc0009395.1_g000026 Rmu_sc0009395.1_g000028 Rmu_sc0009395.1_g000040 Rmu_sc0021809.1_g000001 Rmu_ssc0000442.1_g000026 Rmu_ssc0000442.1_g000030
rosa_roxburghii Rroxscaffold_2G00081280 Rroxscaffold_2G00081290 Rroxscaffold_2G00081330 Rroxscaffold_3G00239990 Rroxscaffold_4G00294050 Rroxscaffold_4G00294070 Rroxscaffold_7G00185030
rosa_rugosa Rorug02G0548700 Rorug02G0548900 Rorug06G0158800 Rorug06G0158900 Rorug07G0186000
rosa_samantha Rh2AG620300 Rh2AG620500 Rh2AG620600 Rh2AG620700 Rh2BG631200 Rh2BG631400 Rh2BG631600 Rh2BG631700 Rh2CG601100 Rh2CG601200 Rh2CG601300 Rh2DG643900 Rh2DG644200 Rh2DG644400 Rh6AG272000 Rh6AG272300 Rh6BG272900 Rh6BG273000 Rh6CG274100 Rh6CG274200 Rh6DG267100 Rh6DG267200 Rh6DG267300 Rh7AG329500 Rh7AG329900 Rh7BG319400 Rh7BG319600 Rh7CG346800 Rh7CG347200 Rh7DG325400
rosa_wichuraiana Rw2G051410 Rw2G051430 Rw2G051440 Rw2G051450 Rw6G023440 Rw7G027780

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 738
AccII CGCG 1 cut(s) 1067
AciI CCGC 5 cut(s) 345, 831, 912, 968, 1067
AclWI GGATC 1 cut(s) 263
AcsI RAATTY 4 cut(s) 423, 436, 625, 1266
AcvI CACGTG 1 cut(s) 673
AfaI GTAC 7 cut(s) 276, 452, 731, 752, 839, 922, 986
AfiI CCNNNNNNNGG 2 cut(s) 188, 440
AgeI ACCGGT 1 cut(s) 188
AgsI TTSAA 7 cut(s) 10, 250, 428, 524, 715, 1057, 1164
AloI GAACNNNNNNTCC 2 cut(s) 1037, 1069
AluBI AGCT 5 cut(s) 408, 487, 548, 591, 850
AluI AGCT 5 cut(s) 408, 487, 548, 591, 850
Alw21I GWGCWC 2 cut(s) 344, 421
AlwI GGATC 1 cut(s) 263
Ama87I CYCGRG 1 cut(s) 814
AoxI GGCC 1 cut(s) 1022
ApeKI GCWGC 5 cut(s) 45, 121, 569, 604, 607
ApoI RAATTY 4 cut(s) 423, 436, 625, 1266
ArsI GACNNNNNNTTYG 4 cut(s) 415, 447, 611, 643
AseI ATTAAT 1 cut(s) 825
AsiGI ACCGGT 1 cut(s) 188
Asp700I GAANNNNTTC 1 cut(s) 969
AspLEI GCGC 1 cut(s) 1210
AspS9I GGNCC 2 cut(s) 370, 431
AsuHPI GGTGA 4 cut(s) 16, 103, 171, 830
AvaI CYCGRG 1 cut(s) 814
AvaII GGWCC 2 cut(s) 370, 431
BbrPI CACGTG 1 cut(s) 673
BbsI GAAGAC 2 cut(s) 689, 1068
Bbv12I GWGCWC 2 cut(s) 344, 421
BbvI GCAGC 5 cut(s) 57, 108, 581, 616, 619
BccI CCATC 1 cut(s) 643
BcgI CGANNNNNNTGC 2 cut(s) 154, 188
BciVI GTATCC 2 cut(s) 523, 776
BfaI CTAG 1 cut(s) 501
BfuI GTATCC 2 cut(s) 523, 776
BisI GCNGC 7 cut(s) 46, 122, 570, 605, 608, 831, 912
BlsI GCNGC 7 cut(s) 47, 123, 571, 606, 609, 832, 913
BmcAI AGTACT 2 cut(s) 452, 986
Bme18I GGWCC 2 cut(s) 370, 431
BmeT110I CYCGRG 1 cut(s) 814
BmgT120I GGNCC 2 cut(s) 370, 431
BmiI GGNNCC 2 cut(s) 372, 910
BmrI ACTGGG 1 cut(s) 871
BmsI GCATC 2 cut(s) 174, 367
BmuI ACTGGG 1 cut(s) 871
BpiI GAAGAC 2 cut(s) 689, 1068
BpuEI CTTGAG 3 cut(s) 467, 473, 642
Bsa29I ATCGAT 1 cut(s) 62
BsaAI YACGTR 1 cut(s) 673
BsaBI GATNNNNATC 1 cut(s) 68
BsaWI WCCGGW 1 cut(s) 188
BsaXI ACNNNNNCTCC 4 cut(s) 81, 111, 1037, 1067
Bsc4I CCNNNNNNNGG 2 cut(s) 188, 440
Bse118I RCCGGY 1 cut(s) 188
Bse1I ACTGG 2 cut(s) 79, 866
Bse3DI GCAATG 5 cut(s) 599, 921, 975, 1055, 1228
Bse8I GATNNNNATC 1 cut(s) 68
BseCI ATCGAT 1 cut(s) 62
BseGI GGATG 1 cut(s) 963
BseJI GATNNNNATC 1 cut(s) 68
BseLI CCNNNNNNNGG 2 cut(s) 188, 440
BseMI GCAATG 5 cut(s) 599, 921, 975, 1055, 1228
BseMII CTCAG 1 cut(s) 425
BseNI ACTGG 2 cut(s) 79, 866
BseXI GCAGC 5 cut(s) 57, 108, 581, 616, 619
Bsh1236I CGCG 1 cut(s) 1067
Bsh1285I CGRYCG 1 cut(s) 1264
BshFI GGCC 1 cut(s) 1024
BshTI ACCGGT 1 cut(s) 188
BshVI ATCGAT 1 cut(s) 62
BsiEI CGRYCG 1 cut(s) 1264
BsiHKAI GWGCWC 2 cut(s) 344, 421
BsiHKCI CYCGRG 1 cut(s) 814
BsiSI CCGG 1 cut(s) 189
BslFI GGGAC 1 cut(s) 141
BslI CCNNNNNNNGG 2 cut(s) 188, 440
BsmFI GGGAC 1 cut(s) 141
BsnI GGCC 1 cut(s) 1024
BsoBI CYCGRG 1 cut(s) 814
Bsp1286I GDGCHC 2 cut(s) 344, 421
Bsp143I GATC 5 cut(s) 268, 478, 675, 960, 1261
BspACI CCGC 5 cut(s) 345, 831, 912, 968, 1067
BspANI GGCC 1 cut(s) 1024
BspCNI CTCAG 1 cut(s) 424
BspDI ATCGAT 1 cut(s) 62
BspFNI CGCG 1 cut(s) 1067
BspLI GGNNCC 2 cut(s) 372, 910
BspPI GGATC 1 cut(s) 263
BsrDI GCAATG 5 cut(s) 599, 921, 975, 1055, 1228
BsrFI RCCGGY 1 cut(s) 188
BsrI ACTGG 2 cut(s) 79, 866
BssAI RCCGGY 1 cut(s) 188
BssMI GATC 5 cut(s) 268, 478, 675, 960, 1261
Bst4CI ACNGT 5 cut(s) 393, 535, 597, 794, 874
Bst6I CTCTTC 1 cut(s) 519
BstBAI YACGTR 1 cut(s) 673
BstC8I GCNNGC 1 cut(s) 303
BstDEI CTNAG 1 cut(s) 411
BstF5I GGATG 1 cut(s) 963
BstFNI CGCG 1 cut(s) 1067
BstHHI GCGC 1 cut(s) 1210
BstKTI GATC 5 cut(s) 271, 481, 678, 963, 1264
BstMBI GATC 5 cut(s) 268, 478, 675, 960, 1261
BstMCI CGRYCG 1 cut(s) 1264
BstMWI GCNNNNNNNGC 1 cut(s) 302
BstNSI RCATGY 1 cut(s) 1199
BstUI CGCG 1 cut(s) 1067
BstV1I GCAGC 5 cut(s) 57, 108, 581, 616, 619
BstV2I GAAGAC 2 cut(s) 689, 1068
BstXI CCANNNNNNTGG 1 cut(s) 34
Bsu15I ATCGAT 1 cut(s) 62
BsuI GTATCC 2 cut(s) 523, 776
BsuRI GGCC 1 cut(s) 1024
BsuTUI ATCGAT 1 cut(s) 62
BtsCI GGATG 1 cut(s) 963
BtsIMutI CAGTG 1 cut(s) 72
Cac8I GCNNGC 1 cut(s) 303
CfoI GCGC 1 cut(s) 1210
Cfr10I RCCGGY 1 cut(s) 188
Cfr13I GGNCC 2 cut(s) 370, 431
ClaI ATCGAT 1 cut(s) 62
CseI GACGC 2 cut(s) 143, 1073
Csp6I GTAC 7 cut(s) 275, 451, 730, 751, 838, 921, 985
CspAI ACCGGT 1 cut(s) 188
CspCI CAANNNNNGTGG 2 cut(s) 979, 1014
CviAII CATG 4 cut(s) 231, 733, 742, 1196
CviQI GTAC 7 cut(s) 275, 451, 730, 751, 838, 921, 985
DdeI CTNAG 1 cut(s) 411
DpnI GATC 5 cut(s) 270, 480, 677, 962, 1263
DpnII GATC 5 cut(s) 268, 478, 675, 960, 1261
Eam1104I CTCTTC 1 cut(s) 519
EarI CTCTTC 1 cut(s) 519
Eco147I AGGCCT 1 cut(s) 1024
Eco47I GGWCC 2 cut(s) 370, 431
Eco72I CACGTG 1 cut(s) 673
Eco88I CYCGRG 1 cut(s) 814
EcoO109I RGGNCCY 1 cut(s) 370
FaeI CATG 4 cut(s) 234, 736, 745, 1199
FaqI GGGAC 1 cut(s) 141
FatI CATG 4 cut(s) 230, 732, 741, 1195
FblI GTMKAC 1 cut(s) 738
Fnu4HI GCNGC 7 cut(s) 46, 122, 570, 605, 608, 831, 912
FokI GGATG 1 cut(s) 970
Fsp4HI GCNGC 7 cut(s) 46, 122, 570, 605, 608, 831, 912
FspBI CTAG 1 cut(s) 501
GlaI GCGC 1 cut(s) 1209
GluI GCNGC 7 cut(s) 46, 122, 570, 605, 608, 831, 912
HaeIII GGCC 1 cut(s) 1024
HapII CCGG 1 cut(s) 189
HgaI GACGC 2 cut(s) 143, 1073
HhaI GCGC 1 cut(s) 1210
Hin1II CATG 4 cut(s) 234, 736, 745, 1199
Hin6I GCGC 1 cut(s) 1208
HinP1I GCGC 1 cut(s) 1208
HinfI GANTC 3 cut(s) 31, 761, 1178
HpaII CCGG 1 cut(s) 189
HphI GGTGA 4 cut(s) 16, 103, 171, 830
Hpy166II GTNNAC 2 cut(s) 179, 739
Hpy188I TCNGA 6 cut(s) 206, 326, 414, 435, 639, 1170
Hpy188III TCNNGA 6 cut(s) 247, 501, 659, 679, 706, 853
Hpy8I GTNNAC 2 cut(s) 179, 739
HpyAV CCTTC 7 cut(s) 295, 331, 740, 751, 899, 948, 989
HpyCH4III ACNGT 5 cut(s) 393, 535, 597, 794, 874
HpyCH4IV ACGT 3 cut(s) 664, 672, 1155
HpyCH4V TGCA 8 cut(s) 165, 220, 388, 604, 878, 980, 1195, 1221
HpyF10VI GCNNNNNNNGC 1 cut(s) 302
HpyF3I CTNAG 1 cut(s) 411
HpySE526I ACGT 3 cut(s) 664, 672, 1155
Hsp92II CATG 4 cut(s) 234, 736, 745, 1199
HspAI GCGC 1 cut(s) 1208
Kzo9I GATC 5 cut(s) 268, 478, 675, 960, 1261
LmnI GCTCC 4 cut(s) 347, 908, 1045, 1090
Lsp1109I GCAGC 5 cut(s) 57, 108, 581, 616, 619
LweI GCATC 2 cut(s) 174, 367
MaeI CTAG 1 cut(s) 501
MaeII ACGT 3 cut(s) 664, 672, 1155
MaeIII GTNAC 4 cut(s) 191, 665, 794, 809
MalI GATC 5 cut(s) 270, 480, 677, 962, 1263
MboI GATC 5 cut(s) 268, 478, 675, 960, 1261
MboII GAAGA 6 cut(s) 536, 694, 856, 1073, 1087, 1162
MfeI CAATTG 1 cut(s) 563
MhlI GDGCHC 2 cut(s) 344, 421
MlyI GAGTC 1 cut(s) 770
MmeI TCCRAC 3 cut(s) 78, 229, 1023
MnlI CCTC 9 cut(s) 83, 143, 268, 361, 520, 859, 1035, 1080, 1195
MroXI GAANNNNTTC 1 cut(s) 969
MseI TTAA 4 cut(s) 543, 555, 723, 825
MspI CCGG 1 cut(s) 189
MunI CAATTG 1 cut(s) 563
MvnI CGCG 1 cut(s) 1067
MwoI GCNNNNNNNGC 1 cut(s) 302
NdeII GATC 5 cut(s) 268, 478, 675, 960, 1261
NlaIII CATG 4 cut(s) 234, 736, 745, 1199
NlaIV GGNNCC 2 cut(s) 372, 910
NspI RCATGY 1 cut(s) 1199
PceI AGGCCT 1 cut(s) 1024
PdmI GAANNNNTTC 1 cut(s) 969
PfeI GAWTC 2 cut(s) 31, 1178
PinAI ACCGGT 1 cut(s) 188
PkrI GCNGC 7 cut(s) 47, 123, 571, 606, 609, 832, 913
Ple19I CGATCG 1 cut(s) 1264
PleI GAGTC 1 cut(s) 769
PmaCI CACGTG 1 cut(s) 673
PmlI CACGTG 1 cut(s) 673
PpsI GAGTC 1 cut(s) 769
Ppu21I YACGTR 1 cut(s) 673
PpuMI RGGWCCY 1 cut(s) 370
PshBI ATTAAT 1 cut(s) 825
Psp5II RGGWCCY 1 cut(s) 370
PspCI CACGTG 1 cut(s) 673
PspN4I GGNNCC 2 cut(s) 372, 910
PspPI GGNCC 2 cut(s) 370, 431
PspPPI RGGWCCY 1 cut(s) 370
PvuI CGATCG 1 cut(s) 1264
RsaI GTAC 7 cut(s) 276, 452, 731, 752, 839, 922, 986
RsaNI GTAC 7 cut(s) 275, 451, 730, 751, 838, 921, 985
SaqAI TTAA 4 cut(s) 543, 555, 723, 825
SatI GCNGC 7 cut(s) 46, 122, 570, 605, 608, 831, 912
Sau3AI GATC 5 cut(s) 268, 478, 675, 960, 1261
Sau96I GGNCC 2 cut(s) 370, 431
ScaI AGTACT 2 cut(s) 452, 986
SchI GAGTC 1 cut(s) 770
SduI GDGCHC 2 cut(s) 344, 421
SfaNI GCATC 2 cut(s) 174, 367
SinI GGWCC 2 cut(s) 370, 431
SmlI CTYRAG 3 cut(s) 482, 488, 657
SmoI CTYRAG 3 cut(s) 482, 488, 657
SseBI AGGCCT 1 cut(s) 1024
SsiI CCGC 5 cut(s) 345, 831, 912, 968, 1067
SspI AATATT 1 cut(s) 576
SspMI CTAG 1 cut(s) 501
StuI AGGCCT 1 cut(s) 1024
TaaI ACNGT 5 cut(s) 393, 535, 597, 794, 874
TaiI ACGT 3 cut(s) 667, 675, 1158
TatI WGTACW 4 cut(s) 450, 729, 837, 984
TauI GCSGC 2 cut(s) 833, 914
TfiI GAWTC 2 cut(s) 31, 1178
Tru1I TTAA 4 cut(s) 543, 555, 723, 825
Tru9I TTAA 4 cut(s) 543, 555, 723, 825
TscAI CASTG 1 cut(s) 79
TseI GCWGC 5 cut(s) 45, 121, 569, 604, 607
TspDTI ATGAA 2 cut(s) 1074, 1239
TspGWI ACGGA 1 cut(s) 477
TspRI CASTG 1 cut(s) 79
VpaK11BI GGWCC 2 cut(s) 370, 431
VspI ATTAAT 1 cut(s) 825
XapI RAATTY 4 cut(s) 423, 436, 625, 1266
XbaI TCTAGA 1 cut(s) 500
XceI RCATGY 1 cut(s) 1199
XmiI GTMKAC 1 cut(s) 738
XmnI GAANNNNTTC 1 cut(s) 969
XspI CTAG 1 cut(s) 501
ZrmI AGTACT 2 cut(s) 452, 986
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.