Glutamate receptor
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g23542 |
| rosa_chinensis | RchiOBHm_Chr1g0323881 RchiOBHm_Chr1g0363301 RchiOBHm_Chr3g0488451 RchiOBHm_Chr4g0387101 RchiOBHm_Chr4g0387111 RchiOBHm_Chr4g0402531 |
| rosa_laevigata | RLG00000000633 RLG00000003072 RLG00000011416 RLG00000019029 RLG00000026076 RLG00000036164 |
| rosa_multiflora | Rmu_co8181938.1_g000002 Rmu_co8182286.1_g000002 Rmu_sc0000103.1_g000012 Rmu_sc0001207.1_g000051 Rmu_sc0003615.1_g000003 Rmu_sc0004695.1_g000012 Rmu_sc0006098.1_g000005 Rmu_sc0007104.1_g000004 Rmu_sc0022560.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00249830 Rroxscaffold_3G00250680 Rroxscaffold_4G00290730 Rroxscaffold_4G00291010 Rroxscaffold_5G00369410 Rroxscaffold_7G00179280 |
| rosa_rugosa | Rorug07G0054300 |
| rosa_samantha | Rh1BG312100 Rh1CG327200 Rh1DG343700 Rh3BG375900 Rh5BG126700 Rh7AG071200 Rh7DG076500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 569 |
| AccB1I | GGYRCC | 1 cut(s) | 569 |
| AccBSI | CCGCTC | 2 cut(s) | 37, 1420 |
| AccI | GTMKAC | 1 cut(s) | 273 |
| AciI | CCGC | 6 cut(s) | 37, 212, 278, 639, 803, 1420 |
| AclI | AACGTT | 1 cut(s) | 194 |
| AcoI | YGGCCR | 1 cut(s) | 1155 |
| AcsI | RAATTY | 8 cut(s) | 238, 488, 611, 788, 845, 994, 1312, 1685 |
| AcuI | CTGAAG | 1 cut(s) | 138 |
| AfaI | GTAC | 3 cut(s) | 571, 1540, 1623 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 63, 229, 373 |
| AflII | CTTAAG | 1 cut(s) | 1004 |
| AgsI | TTSAA | 7 cut(s) | 628, 754, 784, 1100, 1434, 1691, 1811 |
| AjnI | CCWGG | 1 cut(s) | 694 |
| Alw26I | GTCTC | 5 cut(s) | 693, 1109, 1192, 1739, 1803 |
| AoxI | GGCC | 2 cut(s) | 692, 1155 |
| ApeKI | GCWGC | 4 cut(s) | 86, 823, 1463, 1559 |
| ApoI | RAATTY | 8 cut(s) | 238, 488, 611, 788, 845, 994, 1312, 1685 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1670, 1702 |
| AseI | ATTAAT | 1 cut(s) | 1593 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 360 |
| Asp718I | GGTACC | 1 cut(s) | 569 |
| AspS9I | GGNCC | 2 cut(s) | 104, 455 |
| AsuC2I | CCSGG | 1 cut(s) | 574 |
| AvaII | GGWCC | 2 cut(s) | 104, 455 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1443, 1476 |
| BanI | GGYRCC | 1 cut(s) | 569 |
| BbvI | GCAGC | 4 cut(s) | 73, 835, 1450, 1546 |
| BciT130I | CCWGG | 1 cut(s) | 696 |
| BciVI | GTATCC | 1 cut(s) | 1444 |
| BclI | TGATCA | 1 cut(s) | 1597 |
| BcnI | CCSGG | 1 cut(s) | 574 |
| BcoDI | GTCTC | 5 cut(s) | 693, 1109, 1192, 1739, 1803 |
| BfaI | CTAG | 1 cut(s) | 1169 |
| BfmI | CTRYAG | 1 cut(s) | 1836 |
| BfrI | CTTAAG | 1 cut(s) | 1004 |
| BfuI | GTATCC | 1 cut(s) | 1444 |
| BisI | GCNGC | 5 cut(s) | 87, 824, 1421, 1464, 1560 |
| BlsI | GCNGC | 5 cut(s) | 88, 825, 1422, 1465, 1561 |
| Bme1390I | CCNGG | 2 cut(s) | 574, 696 |
| Bme18I | GGWCC | 2 cut(s) | 104, 455 |
| BmgT120I | GGNCC | 2 cut(s) | 104, 455 |
| BmiI | GGNNCC | 4 cut(s) | 105, 106, 123, 571 |
| BmrFI | CCNGG | 2 cut(s) | 574, 696 |
| BmrI | ACTGGG | 2 cut(s) | 1112, 1621 |
| BmsI | GCATC | 5 cut(s) | 339, 1078, 1160, 1244, 1491 |
| BmuI | ACTGGG | 2 cut(s) | 1112, 1621 |
| BpmI | CTGGAG | 3 cut(s) | 99, 444, 717 |
| BpuEI | CTTGAG | 2 cut(s) | 839, 1001 |
| BpuMI | CCSGG | 1 cut(s) | 574 |
| Bsa29I | ATCGAT | 2 cut(s) | 877, 1299 |
| BsaJI | CCNNGG | 2 cut(s) | 504, 573 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 614, 644, 697, 727, 1396, 1426 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 63, 229, 373 |
| Bse1I | ACTGG | 7 cut(s) | 82, 295, 461, 767, 1107, 1215, 1616 |
| Bse3DI | GCAATG | 2 cut(s) | 648, 859 |
| BseBI | CCWGG | 1 cut(s) | 696 |
| BseCI | ATCGAT | 2 cut(s) | 877, 1299 |
| BseDI | CCNNGG | 2 cut(s) | 504, 573 |
| BseGI | GGATG | 5 cut(s) | 219, 535, 811, 1498, 1621 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 63, 229, 373 |
| BseMI | GCAATG | 2 cut(s) | 648, 859 |
| BseMII | CTCAG | 2 cut(s) | 311, 1205 |
| BseNI | ACTGG | 7 cut(s) | 82, 295, 461, 767, 1107, 1215, 1616 |
| BseRI | GAGGAG | 1 cut(s) | 989 |
| BseX3I | CGGCCG | 1 cut(s) | 1155 |
| BseXI | GCAGC | 4 cut(s) | 73, 835, 1450, 1546 |
| BseYI | CCCAGC | 2 cut(s) | 223, 367 |
| BsgI | GTGCAG | 1 cut(s) | 246 |
| Bsh1285I | CGRYCG | 2 cut(s) | 1067, 1158 |
| BshFI | GGCC | 2 cut(s) | 694, 1157 |
| BshNI | GGYRCC | 1 cut(s) | 569 |
| BshVI | ATCGAT | 2 cut(s) | 877, 1299 |
| BsiEI | CGRYCG | 2 cut(s) | 1067, 1158 |
| BsiSI | CCGG | 1 cut(s) | 573 |
| BslFI | GGGAC | 1 cut(s) | 117 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 63, 229, 373 |
| BsmAI | GTCTC | 5 cut(s) | 693, 1109, 1192, 1739, 1803 |
| BsmFI | GGGAC | 1 cut(s) | 117 |
| BsmI | GAATGC | 1 cut(s) | 1016 |
| BsnI | GGCC | 2 cut(s) | 694, 1157 |
| Bsp1407I | TGTACA | 1 cut(s) | 1621 |
| Bsp143I | GATC | 3 cut(s) | 330, 1064, 1597 |
| BspACI | CCGC | 6 cut(s) | 37, 212, 278, 639, 803, 1420 |
| BspANI | GGCC | 2 cut(s) | 694, 1157 |
| BspCNI | CTCAG | 2 cut(s) | 310, 1204 |
| BspDI | ATCGAT | 2 cut(s) | 877, 1299 |
| BspLI | GGNNCC | 4 cut(s) | 105, 106, 123, 571 |
| BspMAI | CTGCAG | 1 cut(s) | 1840 |
| BspQI | GCTCTTC | 1 cut(s) | 27 |
| BspT107I | GGYRCC | 1 cut(s) | 569 |
| BspTI | CTTAAG | 1 cut(s) | 1004 |
| BsrBI | CCGCTC | 2 cut(s) | 37, 1420 |
| BsrDI | GCAATG | 2 cut(s) | 648, 859 |
| BsrGI | TGTACA | 1 cut(s) | 1621 |
| BsrI | ACTGG | 7 cut(s) | 82, 295, 461, 767, 1107, 1215, 1616 |
| BssECI | CCNNGG | 2 cut(s) | 504, 573 |
| BssMI | GATC | 3 cut(s) | 330, 1064, 1597 |
| Bst2UI | CCWGG | 1 cut(s) | 696 |
| Bst4CI | ACNGT | 2 cut(s) | 861, 1765 |
| Bst6I | CTCTTC | 2 cut(s) | 27, 1635 |
| BstAFI | CTTAAG | 1 cut(s) | 1004 |
| BstAUI | TGTACA | 1 cut(s) | 1621 |
| BstC8I | GCNNGC | 4 cut(s) | 282, 286, 1386, 1527 |
| BstDEI | CTNAG | 4 cut(s) | 297, 984, 1183, 1191 |
| BstF5I | GGATG | 5 cut(s) | 219, 535, 811, 1498, 1621 |
| BstKTI | GATC | 3 cut(s) | 333, 1067, 1600 |
| BstMAI | GTCTC | 5 cut(s) | 693, 1109, 1192, 1739, 1803 |
| BstMBI | GATC | 3 cut(s) | 330, 1064, 1597 |
| BstMCI | CGRYCG | 2 cut(s) | 1067, 1158 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 965 |
| BstNI | CCWGG | 1 cut(s) | 696 |
| BstNSI | RCATGY | 2 cut(s) | 284, 1628 |
| BstSCI | CCNGG | 2 cut(s) | 572, 694 |
| BstSFI | CTRYAG | 1 cut(s) | 1836 |
| BstV1I | GCAGC | 4 cut(s) | 73, 835, 1450, 1546 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 723 |
| BstZI | CGGCCG | 1 cut(s) | 1155 |
| Bsu15I | ATCGAT | 2 cut(s) | 877, 1299 |
| BsuI | GTATCC | 1 cut(s) | 1444 |
| BsuRI | GGCC | 2 cut(s) | 694, 1157 |
| BsuTUI | ATCGAT | 2 cut(s) | 877, 1299 |
| BtsCI | GGATG | 5 cut(s) | 219, 535, 811, 1498, 1621 |
| BtsI | GCAGTG | 3 cut(s) | 240, 1200, 1833 |
| BtsIMutI | CAGTG | 6 cut(s) | 240, 288, 340, 1200, 1761, 1833 |
| Cac8I | GCNNGC | 4 cut(s) | 282, 286, 1386, 1527 |
| Cfr13I | GGNCC | 2 cut(s) | 104, 455 |
| ClaI | ATCGAT | 2 cut(s) | 877, 1299 |
| Csp6I | GTAC | 3 cut(s) | 570, 1539, 1622 |
| CviAII | CATG | 3 cut(s) | 266, 281, 1625 |
| CviQI | GTAC | 3 cut(s) | 570, 1539, 1622 |
| DdeI | CTNAG | 4 cut(s) | 297, 984, 1183, 1191 |
| DpnI | GATC | 3 cut(s) | 332, 1066, 1599 |
| DpnII | GATC | 3 cut(s) | 330, 1064, 1597 |
| EaeI | YGGCCR | 1 cut(s) | 1155 |
| EagI | CGGCCG | 1 cut(s) | 1155 |
| Eam1104I | CTCTTC | 2 cut(s) | 27, 1635 |
| EarI | CTCTTC | 2 cut(s) | 27, 1635 |
| EciI | GGCGGA | 1 cut(s) | 818 |
| EclXI | CGGCCG | 1 cut(s) | 1155 |
| Eco32I | GATATC | 1 cut(s) | 451 |
| Eco47I | GGWCC | 2 cut(s) | 104, 455 |
| Eco52I | CGGCCG | 1 cut(s) | 1155 |
| Eco57I | CTGAAG | 1 cut(s) | 138 |
| EcoO109I | RGGNCCY | 1 cut(s) | 104 |
| EcoRII | CCWGG | 1 cut(s) | 694 |
| EcoRV | GATATC | 1 cut(s) | 451 |
| FaeI | CATG | 3 cut(s) | 269, 284, 1628 |
| FaqI | GGGAC | 1 cut(s) | 117 |
| FatI | CATG | 3 cut(s) | 265, 280, 1624 |
| FauI | CCCGC | 2 cut(s) | 30, 285 |
| FauNDI | CATATG | 1 cut(s) | 1803 |
| FbaI | TGATCA | 1 cut(s) | 1597 |
| FblI | GTMKAC | 1 cut(s) | 273 |
| Fnu4HI | GCNGC | 5 cut(s) | 87, 824, 1421, 1464, 1560 |
| FokI | GGATG | 5 cut(s) | 206, 522, 818, 1505, 1628 |
| Fsp4HI | GCNGC | 5 cut(s) | 87, 824, 1421, 1464, 1560 |
| FspBI | CTAG | 1 cut(s) | 1169 |
| GluI | GCNGC | 5 cut(s) | 87, 824, 1421, 1464, 1560 |
| GsaI | CCCAGC | 2 cut(s) | 227, 371 |
| GsuI | CTGGAG | 3 cut(s) | 99, 444, 717 |
| HaeIII | GGCC | 2 cut(s) | 694, 1157 |
| HapII | CCGG | 1 cut(s) | 573 |
| Hin1II | CATG | 3 cut(s) | 269, 284, 1628 |
| HindIII | AAGCTT | 4 cut(s) | 150, 434, 1180, 1692 |
| HinfI | GANTC | 6 cut(s) | 257, 701, 730, 809, 1328, 1647 |
| HpaII | CCGG | 1 cut(s) | 573 |
| Hpy166II | GTNNAC | 2 cut(s) | 274, 1609 |
| Hpy188I | TCNGA | 6 cut(s) | 300, 448, 505, 552, 774, 1825 |
| Hpy188III | TCNNGA | 2 cut(s) | 1062, 1486 |
| Hpy8I | GTNNAC | 2 cut(s) | 274, 1609 |
| HpyAV | CCTTC | 2 cut(s) | 24, 1117 |
| HpyCH4III | ACNGT | 2 cut(s) | 861, 1765 |
| HpyCH4IV | ACGT | 2 cut(s) | 194, 798 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 965 |
| HpyF3I | CTNAG | 4 cut(s) | 297, 984, 1183, 1191 |
| HpySE526I | ACGT | 2 cut(s) | 194, 798 |
| Hsp92II | CATG | 3 cut(s) | 269, 284, 1628 |
| KflI | GGGWCCC | 1 cut(s) | 104 |
| KpnI | GGTACC | 1 cut(s) | 573 |
| Ksp22I | TGATCA | 1 cut(s) | 1597 |
| Kzo9I | GATC | 3 cut(s) | 330, 1064, 1597 |
| LguI | GCTCTTC | 1 cut(s) | 27 |
| LmnI | GCTCC | 3 cut(s) | 1049, 1323, 1417 |
| Lsp1109I | GCAGC | 4 cut(s) | 73, 835, 1450, 1546 |
| LweI | GCATC | 5 cut(s) | 339, 1078, 1160, 1244, 1491 |
| MaeI | CTAG | 1 cut(s) | 1169 |
| MaeII | ACGT | 2 cut(s) | 194, 798 |
| MaeIII | GTNAC | 4 cut(s) | 115, 304, 335, 1171 |
| MalI | GATC | 3 cut(s) | 332, 1066, 1599 |
| MbiI | CCGCTC | 2 cut(s) | 37, 1420 |
| MboI | GATC | 3 cut(s) | 330, 1064, 1597 |
| MboII | GAAGA | 3 cut(s) | 44, 766, 1652 |
| MfeI | CAATTG | 2 cut(s) | 180, 1455 |
| MlyI | GAGTC | 3 cut(s) | 266, 695, 1322 |
| MmeI | TCCRAC | 3 cut(s) | 181, 426, 1480 |
| MroXI | GAANNNNTTC | 1 cut(s) | 360 |
| MseI | TTAA | 6 cut(s) | 558, 1005, 1266, 1400, 1548, 1593 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1487, 1593 |
| MspA1I | CMGCKG | 3 cut(s) | 158, 214, 227 |
| MspCI | CTTAAG | 1 cut(s) | 1004 |
| MspI | CCGG | 1 cut(s) | 573 |
| MspR9I | CCNGG | 2 cut(s) | 574, 696 |
| MunI | CAATTG | 2 cut(s) | 180, 1455 |
| Mva1269I | GAATGC | 1 cut(s) | 1016 |
| MvaI | CCWGG | 1 cut(s) | 696 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 965 |
| NciI | CCSGG | 1 cut(s) | 574 |
| NdeI | CATATG | 1 cut(s) | 1803 |
| NdeII | GATC | 3 cut(s) | 330, 1064, 1597 |
| NlaIII | CATG | 3 cut(s) | 269, 284, 1628 |
| NlaIV | GGNNCC | 4 cut(s) | 105, 106, 123, 571 |
| NmuCI | GTSAC | 2 cut(s) | 335, 1171 |
| NspI | RCATGY | 2 cut(s) | 284, 1628 |
| PaeI | GCATGC | 1 cut(s) | 284 |
| PciSI | GCTCTTC | 1 cut(s) | 27 |
| PctI | GAATGC | 1 cut(s) | 1016 |
| PdmI | GAANNNNTTC | 1 cut(s) | 360 |
| PfeI | GAWTC | 3 cut(s) | 730, 809, 1647 |
| PkrI | GCNGC | 5 cut(s) | 88, 825, 1422, 1465, 1561 |
| Ple19I | CGATCG | 1 cut(s) | 1067 |
| PleI | GAGTC | 3 cut(s) | 265, 695, 1322 |
| PpsI | GAGTC | 3 cut(s) | 265, 695, 1322 |
| PpuMI | RGGWCCY | 1 cut(s) | 104 |
| PshBI | ATTAAT | 1 cut(s) | 1593 |
| Psp1406I | AACGTT | 1 cut(s) | 194 |
| Psp5II | RGGWCCY | 1 cut(s) | 104 |
| Psp6I | CCWGG | 1 cut(s) | 694 |
| PspFI | CCCAGC | 2 cut(s) | 223, 367 |
| PspGI | CCWGG | 1 cut(s) | 694 |
| PspN4I | GGNNCC | 4 cut(s) | 105, 106, 123, 571 |
| PspPI | GGNCC | 2 cut(s) | 104, 455 |
| PspPPI | RGGWCCY | 1 cut(s) | 104 |
| PstI | CTGCAG | 1 cut(s) | 1840 |
| PvuI | CGATCG | 1 cut(s) | 1067 |
| PvuII | CAGCTG | 2 cut(s) | 158, 227 |
| RsaI | GTAC | 3 cut(s) | 571, 1540, 1623 |
| RsaNI | GTAC | 3 cut(s) | 570, 1539, 1622 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1487, 1593 |
| SapI | GCTCTTC | 1 cut(s) | 27 |
| SaqAI | TTAA | 6 cut(s) | 558, 1005, 1266, 1400, 1548, 1593 |
| SatI | GCNGC | 5 cut(s) | 87, 824, 1421, 1464, 1560 |
| Sau3AI | GATC | 3 cut(s) | 330, 1064, 1597 |
| Sau96I | GGNCC | 2 cut(s) | 104, 455 |
| SchI | GAGTC | 3 cut(s) | 266, 695, 1322 |
| ScrFI | CCNGG | 2 cut(s) | 574, 696 |
| SfaNI | GCATC | 5 cut(s) | 339, 1078, 1160, 1244, 1491 |
| SfcI | CTRYAG | 1 cut(s) | 1836 |
| SinI | GGWCC | 2 cut(s) | 104, 455 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1487, 1593 |
| SmlI | CTYRAG | 3 cut(s) | 818, 1004, 1016 |
| SmoI | CTYRAG | 3 cut(s) | 818, 1004, 1016 |
| SphI | GCATGC | 1 cut(s) | 284 |
| SsiI | CCGC | 6 cut(s) | 37, 212, 278, 639, 803, 1420 |
| SspI | AATATT | 1 cut(s) | 930 |
| SspMI | CTAG | 1 cut(s) | 1169 |
| StyD4I | CCNGG | 2 cut(s) | 572, 694 |
| TaaI | ACNGT | 2 cut(s) | 861, 1765 |
| TaiI | ACGT | 2 cut(s) | 197, 801 |
| TaqI | TCGA | 6 cut(s) | 877, 1023, 1063, 1121, 1231, 1299 |
| TaqII | GACCGA | 1 cut(s) | 443 |
| TatI | WGTACW | 2 cut(s) | 1538, 1621 |
| TauI | GCSGC | 1 cut(s) | 1423 |
| TfiI | GAWTC | 3 cut(s) | 730, 809, 1647 |
| Tru1I | TTAA | 6 cut(s) | 558, 1005, 1266, 1400, 1548, 1593 |
| Tru9I | TTAA | 6 cut(s) | 558, 1005, 1266, 1400, 1548, 1593 |
| TscAI | CASTG | 6 cut(s) | 240, 295, 340, 1207, 1768, 1840 |
| TseFI | GTSAC | 2 cut(s) | 335, 1171 |
| TseI | GCWGC | 4 cut(s) | 86, 823, 1463, 1559 |
| Tsp45I | GTSAC | 2 cut(s) | 335, 1171 |
| TspGWI | ACGGA | 1 cut(s) | 134 |
| TspRI | CASTG | 6 cut(s) | 240, 295, 340, 1207, 1768, 1840 |
| Vha464I | CTTAAG | 1 cut(s) | 1004 |
| VpaK11BI | GGWCC | 2 cut(s) | 104, 455 |
| VspI | ATTAAT | 1 cut(s) | 1593 |
| XapI | RAATTY | 8 cut(s) | 238, 488, 611, 788, 845, 994, 1312, 1685 |
| XceI | RCATGY | 2 cut(s) | 284, 1628 |
| XmiI | GTMKAC | 1 cut(s) | 273 |
| XmnI | GAANNNNTTC | 1 cut(s) | 360 |
| XspI | CTAG | 1 cut(s) | 1169 |