Pentatricopeptide repeat-containing protein At1g74850
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g23542 |
| rosa_chinensis | RchiOBHm_Chr1g0323881 RchiOBHm_Chr1g0363301 RchiOBHm_Chr3g0488451 RchiOBHm_Chr4g0387101 RchiOBHm_Chr4g0387111 RchiOBHm_Chr4g0402531 |
| rosa_laevigata | RLG00000000633 RLG00000003072 RLG00000011416 RLG00000019029 RLG00000026076 RLG00000036164 |
| rosa_multiflora | Rmu_co8181938.1_g000002 Rmu_co8182286.1_g000002 Rmu_sc0000103.1_g000012 Rmu_sc0001207.1_g000051 Rmu_sc0003615.1_g000003 Rmu_sc0004695.1_g000012 Rmu_sc0006098.1_g000005 Rmu_sc0007104.1_g000004 Rmu_sc0022560.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00249830 Rroxscaffold_3G00250680 Rroxscaffold_4G00290730 Rroxscaffold_4G00291010 Rroxscaffold_5G00369410 Rroxscaffold_7G00179280 |
| rosa_rugosa | Rorug07G0054300 |
| rosa_samantha | Rh1BG312100 Rh1CG327200 Rh1DG343700 Rh3BG375900 Rh5BG126700 Rh7AG071200 Rh7DG076500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 57, 260 |
| AclWI | GGATC | 1 cut(s) | 273 |
| AcuI | CTGAAG | 1 cut(s) | 213 |
| AgsI | TTSAA | 1 cut(s) | 70 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 189, 221 |
| Alw26I | GTCTC | 1 cut(s) | 126 |
| AlwI | GGATC | 1 cut(s) | 273 |
| AoxI | GGCC | 1 cut(s) | 202 |
| ApeKI | GCWGC | 1 cut(s) | 307 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 77, 109 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 240 |
| AspLEI | GCGC | 1 cut(s) | 6 |
| BbvI | GCAGC | 1 cut(s) | 294 |
| BccI | CCATC | 4 cut(s) | 106, 134, 154, 280 |
| BcoDI | GTCTC | 1 cut(s) | 126 |
| BisI | GCNGC | 2 cut(s) | 57, 308 |
| BlsI | GCNGC | 2 cut(s) | 58, 309 |
| BmsI | GCATC | 5 cut(s) | 6, 28, 43, 66, 247 |
| BsaJI | CCNNGG | 1 cut(s) | 205 |
| Bse1I | ACTGG | 1 cut(s) | 158 |
| BseDI | CCNNGG | 1 cut(s) | 205 |
| BseGI | GGATG | 2 cut(s) | 55, 262 |
| BseNI | ACTGG | 1 cut(s) | 158 |
| BseXI | GCAGC | 1 cut(s) | 294 |
| BshFI | GGCC | 1 cut(s) | 204 |
| BsmAI | GTCTC | 1 cut(s) | 126 |
| BsnI | GGCC | 1 cut(s) | 204 |
| Bsp143I | GATC | 1 cut(s) | 265 |
| BspACI | CCGC | 2 cut(s) | 57, 260 |
| BspANI | GGCC | 1 cut(s) | 204 |
| BspPI | GGATC | 1 cut(s) | 273 |
| BsrI | ACTGG | 1 cut(s) | 158 |
| BssECI | CCNNGG | 1 cut(s) | 205 |
| BssMI | GATC | 1 cut(s) | 265 |
| BssT1I | CCWWGG | 1 cut(s) | 205 |
| Bst6I | CTCTTC | 1 cut(s) | 323 |
| BstDEI | CTNAG | 1 cut(s) | 60 |
| BstF5I | GGATG | 2 cut(s) | 55, 262 |
| BstHHI | GCGC | 1 cut(s) | 6 |
| BstKTI | GATC | 1 cut(s) | 268 |
| BstMAI | GTCTC | 1 cut(s) | 126 |
| BstMBI | GATC | 1 cut(s) | 265 |
| BstV1I | GCAGC | 1 cut(s) | 294 |
| BstX2I | RGATCY | 1 cut(s) | 265 |
| BstYI | RGATCY | 1 cut(s) | 265 |
| BsuRI | GGCC | 1 cut(s) | 204 |
| BtsCI | GGATG | 2 cut(s) | 55, 262 |
| CfoI | GCGC | 1 cut(s) | 6 |
| CviAII | CATG | 1 cut(s) | 13 |
| CviJI | RGCY | 2 cut(s) | 204, 307 |
| CviKI_1 | RGCY | 2 cut(s) | 204, 307 |
| DdeI | CTNAG | 1 cut(s) | 60 |
| DpnI | GATC | 1 cut(s) | 267 |
| DpnII | GATC | 1 cut(s) | 265 |
| Eam1104I | CTCTTC | 1 cut(s) | 323 |
| EarI | CTCTTC | 1 cut(s) | 323 |
| Eco130I | CCWWGG | 1 cut(s) | 205 |
| Eco57I | CTGAAG | 1 cut(s) | 213 |
| EcoT14I | CCWWGG | 1 cut(s) | 205 |
| EcoT22I | ATGCAT | 1 cut(s) | 21 |
| ErhI | CCWWGG | 1 cut(s) | 205 |
| FaeI | CATG | 1 cut(s) | 16 |
| FaiI | YATR | 6 cut(s) | 14, 30, 138, 171, 220, 324 |
| FatI | CATG | 1 cut(s) | 12 |
| FauI | CCCGC | 1 cut(s) | 253 |
| Fnu4HI | GCNGC | 2 cut(s) | 57, 308 |
| FokI | GGATG | 2 cut(s) | 62, 269 |
| Fsp4HI | GCNGC | 2 cut(s) | 57, 308 |
| GlaI | GCGC | 1 cut(s) | 5 |
| GluI | GCNGC | 2 cut(s) | 57, 308 |
| HaeIII | GGCC | 1 cut(s) | 204 |
| HhaI | GCGC | 1 cut(s) | 6 |
| Hin1II | CATG | 1 cut(s) | 16 |
| Hin6I | GCGC | 1 cut(s) | 4 |
| HinP1I | GCGC | 1 cut(s) | 4 |
| Hpy188I | TCNGA | 2 cut(s) | 193, 231 |
| HpyCH4V | TGCA | 2 cut(s) | 19, 32 |
| HpyF3I | CTNAG | 1 cut(s) | 60 |
| Hsp92II | CATG | 1 cut(s) | 16 |
| HspAI | GCGC | 1 cut(s) | 4 |
| Kzo9I | GATC | 1 cut(s) | 265 |
| LmnI | GCTCC | 1 cut(s) | 115 |
| LpnPI | CCDG | 3 cut(s) | 28, 139, 306 |
| Lsp1109I | GCAGC | 1 cut(s) | 294 |
| LweI | GCATC | 5 cut(s) | 6, 28, 43, 66, 247 |
| MalI | GATC | 1 cut(s) | 267 |
| MboI | GATC | 1 cut(s) | 265 |
| MboII | GAAGA | 4 cut(s) | 206, 260, 305, 310 |
| MflI | RGATCY | 1 cut(s) | 265 |
| MluCI | AATT | 1 cut(s) | 325 |
| MnlI | CCTC | 1 cut(s) | 207 |
| Mph1103I | ATGCAT | 1 cut(s) | 21 |
| MroXI | GAANNNNTTC | 1 cut(s) | 240 |
| MslI | CAYNNNNRTG | 1 cut(s) | 244 |
| NdeII | GATC | 1 cut(s) | 265 |
| NlaIII | CATG | 1 cut(s) | 16 |
| NsiI | ATGCAT | 1 cut(s) | 21 |
| PdmI | GAANNNNTTC | 1 cut(s) | 240 |
| PkrI | GCNGC | 2 cut(s) | 58, 309 |
| PsuI | RGATCY | 1 cut(s) | 265 |
| RseI | CAYNNNNRTG | 1 cut(s) | 244 |
| SatI | GCNGC | 2 cut(s) | 57, 308 |
| Sau3AI | GATC | 1 cut(s) | 265 |
| SetI | ASST | 3 cut(s) | 47, 218, 305 |
| SfaNI | GCATC | 5 cut(s) | 6, 28, 43, 66, 247 |
| SgeI | CNNG | 9 cut(s) | 25, 35, 55, 101, 139, 166, 218, 273, 305 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 244 |
| Sse9I | AATT | 1 cut(s) | 325 |
| SsiI | CCGC | 2 cut(s) | 57, 260 |
| SspI | AATATT | 1 cut(s) | 100 |
| StyI | CCWWGG | 1 cut(s) | 205 |
| TasI | AATT | 1 cut(s) | 325 |
| TauI | GCSGC | 1 cut(s) | 59 |
| TseI | GCWGC | 1 cut(s) | 307 |
| XmnI | GAANNNNTTC | 1 cut(s) | 240 |
| Zsp2I | ATGCAT | 1 cut(s) | 21 |