Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0003456

Physical Location & Seq

Genomic Coordinates Reverse (-)

43959095 .. 43962587

Gene Structure 3493 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000003072

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1701 bp

ATGCAAAAGGAGGTCCTCCACTCCACGGCCGCTCTCTCCGCCCTCATCAACAAGCTCGAGAAGCTTCATCAGCCCCTCTACATCGCAGTCACAGAGGAGGTCAACCTCGTGGGCGAATCTACTGCATCTGACCAATACCAGGCGAAGCAGGATGTAACAGTTGAGGGAAATGATGATTTGATGAAAGATGATAAAGATGATGAAATCGCACAAGTAGATGATGAAGATAGAGAAAGAGAACAGAATATGGAGTGTAGCCAAGTTGACGAGATGAGTGTCCATGTTTCAAGTTCTAACGGGGAGCCTGAGGCTACAGGCTTTGTTGGAGATATACCGCTGGACATCCCAGTTATGGAAGTGAATTTGGCCGGTATCAATGAGTCTACACATGATGTAGACCCGAATGCAAGCACTGGTTCTCAGACCTGTGGTGGACTAGAAAATCAGACATTGGAAATCAATGTGGGAATACTGGAGAATATTGGAGTGTCGGTTATCGGTCCTCCAGTAGTGGAAGCACTGAAAGTGATGTCTCATATGCTTCAAGTAAAGTTTTCAGATTTTGGCGCTGCAGTTGTTCAGGGTGCAACCTACATAAGCCTGAAAGTTAAAGTTTACATGGTTGTTGGCTGTTGTAAAGAAATTGTTCACACTTGGTTGTCAAAATTTCCAGCAGTTCAATTTTGCAGTTTAAGTGATGATGCATTTGGAGATATTGCTGGTATGGAATCTGATCTTTTCAGTTCATATGCTAAATCATTTTGTGCTGCTCTAGTTGTTGCTTCCATTTCCTCATTTGTAATCCACCATGAGTTCACCACCATGCTGTACCCCCTCCTTCTTATCATCTCCACTGTTCTTATAACTATTGGAATTGCAATTGATAGCTGGGTTGCTTTGCCATCATCCTTCACAATTTACAGTATAAGAATTAAGAACATTGTAAAGAACTGCCTCATCGAAGATTTCAATTGTGCATTCCAGGAGAACATACTTACTCAGGGTCATATGTACCTGTTTATTCATTATATTTGCCTATACTCAAATATATTGAGATATGAGACCAAGAAGGTGATCCCATTCCAGGAAGCCACGAGTGTAAGAGAAGTGAAAACGGCAGGGATCTTTCCTAATGCAATAGAAGAAGTACTTCTACAGATGGTTGGAGACAAGAAGTACTCCTTTGCACGCAATGGAGCTTACAGAATCATAAATGATGTTTGGTTGCAATATGTTGATGGTGCCATAGTGACTACAGCACAACTGGAATCAATCTCTGAGAACCAAGGGAATGGAGTGGTAATTGAGAAAATGGAGAGCTCAAATTGCCTATTTAAGGAACTGGATGTTACTGACAGGAACATAATTACTCATCTTTCAAAAGACTCTGAGCTCCCATGCAAAGTTGAAGACACGGATTGTTATTGGAAATGGTTTTCTAGTAACTTGGCCTCAGGAGGTGCTTCTCCTCTTCTCTTTGTCTACTCTTTGTACTATGCTTGTACCCATTTGGCTCGTGATTCTAAGGCTACAAAGAAGGGAGGAGAACGACAATTCAATGGTCTGGTTGATGTCTACAGGAAGACATTGAAATCTGATGGTATTGCAGGAATTGACTTCTTGGAATTTAAACCTTCAGAGTGTGCAGCAGCAGTGACCATTTCTGTAACAGGAGGAAGCAAAGCATTAGATTACACTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006950 GO:0006952 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009719 GO:0009723 GO:0009725 GO:0009751 GO:0010033 GO:0010941 GO:0012505 GO:0014070 GO:0042221 GO:0042493 GO:0042742 GO:0043067 GO:0043069 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046677 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0060548 GO:0065007 GO:0098542 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4782 GRAM

Protein Analysis

567

Amino Acids

62.31

Weight (kDa)

4.68

Isoelectric Point (pI)

33.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
H_PPase	PF03030	234 - 290	6.3e-07	Inorganic H+ pyrophosphatase
GRAM	PF02893	317 - 400	6.7e-11	GRAM domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003456)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g23542
rosa_chinensis	RchiOBHm_Chr1g0323881 RchiOBHm_Chr1g0363301 RchiOBHm_Chr3g0488451 RchiOBHm_Chr4g0387101 RchiOBHm_Chr4g0387111 RchiOBHm_Chr4g0402531
rosa_laevigata	RLG00000000633 RLG00000003072 RLG00000011416 RLG00000019029 RLG00000026076 RLG00000036164
rosa_multiflora	Rmu_co8181938.1_g000002 Rmu_co8182286.1_g000002 Rmu_sc0000103.1_g000012 Rmu_sc0001207.1_g000051 Rmu_sc0003615.1_g000003 Rmu_sc0004695.1_g000012 Rmu_sc0006098.1_g000005 Rmu_sc0007104.1_g000004 Rmu_sc0022560.1_g000001
rosa_roxburghii	Rroxscaffold_3G00249830 Rroxscaffold_3G00250680 Rroxscaffold_4G00290730 Rroxscaffold_4G00291010 Rroxscaffold_5G00369410 Rroxscaffold_7G00179280
rosa_rugosa	Rorug07G0054300
rosa_samantha	Rh1BG312100 Rh1CG327200 Rh1DG343700 Rh3BG375900 Rh5BG126700 Rh7AG071200 Rh7DG076500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	863
AccB1I	GGYRCC	1 cut(s)	1241
AccBSI	CCGCTC	1 cut(s)	32
AccI	GTMKAC	4 cut(s)	383, 396, 1482, 1575
AciI	CCGC	3 cut(s)	30, 39, 335
AclWI	GGATC	2 cut(s)	1069, 1130
AcoI	YGGCCR	2 cut(s)	27, 366
AcsI	RAATTY	3 cut(s)	361, 665, 1625
AcuI	CTGAAG	1 cut(s)	1620
AfaI	GTAC	6 cut(s)	830, 1013, 1149, 1178, 1493, 1504
AfiI	CCNNNNNNNGG	5 cut(s)	25, 139, 352, 1084, 1336
AgsI	TTSAA	8 cut(s)	288, 545, 680, 970, 1380, 1409, 1558, 1591
AjnI	CCWGG	3 cut(s)	138, 981, 1083
AluBI	AGCT	6 cut(s)	55, 64, 888, 1199, 1320, 1393
AluI	AGCT	6 cut(s)	55, 64, 888, 1199, 1320, 1393
Alw21I	GWGCWC	2 cut(s)	1322, 1395
Alw26I	GTCTC	3 cut(s)	537, 1055, 1161
AlwI	GGATC	2 cut(s)	1069, 1130
Ama87I	CYCGRG	1 cut(s)	56
AoxI	GGCC	3 cut(s)	27, 366, 1449
ApeKI	GCWGC	4 cut(s)	569, 767, 1646, 1649
ApoI	RAATTY	3 cut(s)	361, 665, 1625
Asp700I	GAANNNNTTC	2 cut(s)	645, 1149
AspLEI	GCGC	1 cut(s)	569
AspS9I	GGNCC	2 cut(s)	13, 500
AsuHPI	GGTGA	2 cut(s)	808, 1084
AvaI	CYCGRG	1 cut(s)	56
AvaII	GGWCC	2 cut(s)	13, 500
AxyI	CCTNAGG	2 cut(s)	306, 1453
BanI	GGYRCC	1 cut(s)	1241
BanII	GRGCYC	2 cut(s)	1322, 1395
BarI	GAAGNNNNNNTAC	2 cut(s)	1137, 1169
BauI	CACGAG	3 cut(s)	107, 1093, 1515
BbsI	GAAGAC	2 cut(s)	1416, 1589
Bbv12I	GWGCWC	2 cut(s)	1322, 1395
BbvI	GCAGC	4 cut(s)	556, 754, 1658, 1661
BccI	CCATC	4 cut(s)	910, 1153, 1232, 1592
BceAI	ACGGC	2 cut(s)	42, 1131
BcgI	CGANNNNNNTGC	2 cut(s)	104, 138
BciT130I	CCWGG	3 cut(s)	140, 983, 1085
BcoDI	GTCTC	3 cut(s)	537, 1055, 1161
BfaI	CTAG	3 cut(s)	437, 773, 1440
BfmI	CTRYAG	5 cut(s)	312, 570, 1154, 1254, 1576
BfoI	RGCGCY	1 cut(s)	570
BisI	GCNGC	5 cut(s)	30, 570, 768, 1647, 1650
BlsI	GCNGC	5 cut(s)	31, 571, 769, 1648, 1651
BmcAI	AGTACT	2 cut(s)	1149, 1178
Bme1390I	CCNGG	3 cut(s)	140, 983, 1085
Bme18I	GGWCC	2 cut(s)	13, 500
BmeT110I	CYCGRG	1 cut(s)	56
BmgT120I	GGNCC	2 cut(s)	13, 500
BmiI	GGNNCC	2 cut(s)	303, 1243
BmrFI	CCNGG	3 cut(s)	140, 983, 1085
BmrI	ACTGGG	1 cut(s)	341
BmsI	GCATC	2 cut(s)	134, 691
BmuI	ACTGGG	1 cut(s)	341
BpiI	GAAGAC	2 cut(s)	1416, 1589
BpmI	CTGGAG	2 cut(s)	489, 494
BsaI	GGTCTC	1 cut(s)	1055
BsaJI	CCNNGG	2 cut(s)	24, 1285
BsaXI	ACNNNNNCTCC	2 cut(s)	477, 507
Bsc4I	CCNNNNNNNGG	5 cut(s)	25, 139, 352, 1084, 1336
Bse118I	RCCGGY	1 cut(s)	368
Bse1I	ACTGG	6 cut(s)	347, 418, 477, 506, 1269, 1347
Bse21I	CCTNAGG	2 cut(s)	306, 1453
Bse3DI	GCAATG	1 cut(s)	1198
BseBI	CCWGG	3 cut(s)	140, 983, 1085
BseDI	CCNNGG	2 cut(s)	24, 1285
BseGI	GGATG	4 cut(s)	157, 342, 905, 1351
BseLI	CCNNNNNNNGG	5 cut(s)	25, 139, 352, 1084, 1336
BseMI	GCAATG	1 cut(s)	1198
BseMII	CTCAG	6 cut(s)	297, 434, 1013, 1269, 1380, 1467
BseNI	ACTGG	6 cut(s)	347, 418, 477, 506, 1269, 1347
BseRI	GAGGAG	3 cut(s)	110, 1458, 1557
BseX3I	CGGCCG	1 cut(s)	27
BseXI	GCAGC	4 cut(s)	556, 754, 1658, 1661
BseYI	CCCAGC	1 cut(s)	888
BsgI	GTGCAG	1 cut(s)	1665
Bsh1285I	CGRYCG	1 cut(s)	30
BshFI	GGCC	3 cut(s)	29, 368, 1451
BshNI	GGYRCC	1 cut(s)	1241
BsiEI	CGRYCG	1 cut(s)	30
BsiHKAI	GWGCWC	2 cut(s)	1322, 1395
BsiHKCI	CYCGRG	1 cut(s)	56
BsiSI	CCGG	1 cut(s)	369
BslI	CCNNNNNNNGG	5 cut(s)	25, 139, 352, 1084, 1336
BsmAI	GTCTC	3 cut(s)	537, 1055, 1161
BsmI	GAATGC	2 cut(s)	409, 977
BsnI	GGCC	3 cut(s)	29, 368, 1451
Bso31I	GGTCTC	1 cut(s)	1055
BsoBI	CYCGRG	1 cut(s)	56
Bsp1286I	GDGCHC	2 cut(s)	1322, 1395
Bsp143I	GATC	3 cut(s)	733, 1074, 1122
BspACI	CCGC	3 cut(s)	30, 39, 335
BspANI	GGCC	3 cut(s)	29, 368, 1451
BspCNI	CTCAG	6 cut(s)	298, 433, 1012, 1270, 1381, 1466
BspLI	GGNNCC	2 cut(s)	303, 1243
BspMAI	CTGCAG	1 cut(s)	574
BspPI	GGATC	2 cut(s)	1069, 1130
BspT107I	GGYRCC	1 cut(s)	1241
BspTNI	GGTCTC	1 cut(s)	1055
BsrBI	CCGCTC	1 cut(s)	32
BsrDI	GCAATG	1 cut(s)	1198
BsrFI	RCCGGY	1 cut(s)	368
BsrI	ACTGG	6 cut(s)	347, 418, 477, 506, 1269, 1347
BssAI	RCCGGY	1 cut(s)	368
BssECI	CCNNGG	2 cut(s)	24, 1285
BssMI	GATC	3 cut(s)	733, 1074, 1122
BssSI	CACGAG	3 cut(s)	107, 1093, 1515
BssT1I	CCWWGG	1 cut(s)	1285
Bst2BI	CACGAG	3 cut(s)	107, 1093, 1515
Bst2UI	CCWGG	3 cut(s)	140, 983, 1085
Bst4CI	ACNGT	3 cut(s)	160, 856, 923
Bst6I	CTCTTC	1 cut(s)	1476
BstC8I	GCNNGC	2 cut(s)	409, 1189
BstDEI	CTNAG	8 cut(s)	306, 420, 999, 1278, 1389, 1453, 1524, 1698
BstDSI	CCRYGG	1 cut(s)	24
BstENI	CCTNNNNNAGG	1 cut(s)	1334
BstF5I	GGATG	4 cut(s)	157, 342, 905, 1351
BstH2I	RGCGCY	1 cut(s)	570
BstHHI	GCGC	1 cut(s)	569
BstKTI	GATC	3 cut(s)	736, 1077, 1125
BstMAI	GTCTC	3 cut(s)	537, 1055, 1161
BstMBI	GATC	3 cut(s)	733, 1074, 1122
BstMCI	CGRYCG	1 cut(s)	30
BstMWI	GCNNNNNNNGC	4 cut(s)	38, 61, 70, 1326
BstNI	CCWGG	3 cut(s)	140, 983, 1085
BstSCI	CCNGG	3 cut(s)	138, 981, 1083
BstSFI	CTRYAG	5 cut(s)	312, 570, 1154, 1254, 1576
BstV1I	GCAGC	4 cut(s)	556, 754, 1658, 1661
BstV2I	GAAGAC	2 cut(s)	1416, 1589
BstX2I	RGATCY	1 cut(s)	1122
BstXI	CCANNNNNNTGG	1 cut(s)	1292
BstYI	RGATCY	1 cut(s)	1122
BstZI	CGGCCG	1 cut(s)	27
Bsu36I	CCTNAGG	2 cut(s)	306, 1453
BsuRI	GGCC	3 cut(s)	29, 368, 1451
BtgI	CCRYGG	1 cut(s)	24
BtgZI	GCGATG	1 cut(s)	67
BtsCI	GGATG	4 cut(s)	157, 342, 905, 1351
BtsI	GCAGTG	1 cut(s)	1659
BtsIMutI	CAGTG	4 cut(s)	411, 518, 852, 1659
Cac8I	GCNNGC	2 cut(s)	409, 1189
CfoI	GCGC	1 cut(s)	569
Cfr10I	RCCGGY	1 cut(s)	368
Cfr13I	GGNCC	2 cut(s)	13, 500
Csp6I	GTAC	6 cut(s)	829, 1012, 1148, 1177, 1492, 1503
CviAII	CATG	6 cut(s)	281, 389, 619, 809, 823, 1398
CviQI	GTAC	6 cut(s)	829, 1012, 1148, 1177, 1492, 1503
DdeI	CTNAG	8 cut(s)	306, 420, 999, 1278, 1389, 1453, 1524, 1698
DpnI	GATC	3 cut(s)	735, 1076, 1124
DpnII	GATC	3 cut(s)	733, 1074, 1122
DraI	TTTAAA	1 cut(s)	1630
EaeI	YGGCCR	2 cut(s)	27, 366
EagI	CGGCCG	1 cut(s)	27
Eam1104I	CTCTTC	1 cut(s)	1476
EarI	CTCTTC	1 cut(s)	1476
EciI	GGCGGA	1 cut(s)	28
Ecl136II	GAGCTC	2 cut(s)	1320, 1393
EclXI	CGGCCG	1 cut(s)	27
Eco130I	CCWWGG	1 cut(s)	1285
Eco24I	GRGCYC	2 cut(s)	1322, 1395
Eco31I	GGTCTC	1 cut(s)	1055
Eco47I	GGWCC	2 cut(s)	13, 500
Eco52I	CGGCCG	1 cut(s)	27
Eco53kI	GAGCTC	2 cut(s)	1320, 1393
Eco57I	CTGAAG	1 cut(s)	1620
Eco81I	CCTNAGG	2 cut(s)	306, 1453
Eco88I	CYCGRG	1 cut(s)	56
EcoICRI	GAGCTC	2 cut(s)	1320, 1393
EcoNI	CCTNNNNNAGG	1 cut(s)	1334
EcoO109I	RGGNCCY	1 cut(s)	13
EcoRII	CCWGG	3 cut(s)	138, 981, 1083
EcoT14I	CCWWGG	1 cut(s)	1285
EcoT22I	ATGCAT	1 cut(s)	706
EcoT38I	GRGCYC	2 cut(s)	1322, 1395
ErhI	CCWWGG	1 cut(s)	1285
FaeI	CATG	6 cut(s)	284, 392, 622, 812, 826, 1401
FalI	AAGNNNNNCTT	4 cut(s)	1134, 1166, 1166, 1198
FatI	CATG	6 cut(s)	280, 388, 618, 808, 822, 1397
FauNDI	CATATG	3 cut(s)	537, 748, 1008
FblI	GTMKAC	4 cut(s)	383, 396, 1482, 1575
Fnu4HI	GCNGC	5 cut(s)	30, 570, 768, 1647, 1650
FokI	GGATG	4 cut(s)	164, 329, 892, 1358
FriOI	GRGCYC	2 cut(s)	1322, 1395
Fsp4HI	GCNGC	5 cut(s)	30, 570, 768, 1647, 1650
FspBI	CTAG	3 cut(s)	437, 773, 1440
GlaI	GCGC	1 cut(s)	568
GluI	GCNGC	5 cut(s)	30, 570, 768, 1647, 1650
GsaI	CCCAGC	1 cut(s)	892
GsuI	CTGGAG	2 cut(s)	489, 494
HaeII	RGCGCY	1 cut(s)	570
HaeIII	GGCC	3 cut(s)	29, 368, 1451
HapII	CCGG	1 cut(s)	369
HhaI	GCGC	1 cut(s)	569
Hin1II	CATG	6 cut(s)	284, 392, 622, 812, 826, 1401
Hin6I	GCGC	1 cut(s)	567
HinP1I	GCGC	1 cut(s)	567
HincII	GTYRAC	2 cut(s)	103, 265
HindII	GTYRAC	2 cut(s)	103, 265
HindIII	AAGCTT	1 cut(s)	62
HinfI	GANTC	7 cut(s)	116, 380, 728, 1206, 1268, 1385, 1520
HpaII	CCGG	1 cut(s)	369
HphI	GGTGA	2 cut(s)	808, 1084
Hpy188I	TCNGA	9 cut(s)	130, 423, 447, 559, 733, 1279, 1390, 1597, 1639
Hpy188III	TCNNGA	3 cut(s)	58, 1455, 1517
HpyAV	CCTTC	5 cut(s)	848, 919, 1063, 1531, 1644
HpyCH4III	ACNGT	3 cut(s)	160, 856, 923
HpyF10VI	GCNNNNNNNGC	4 cut(s)	38, 61, 70, 1326
HpyF3I	CTNAG	8 cut(s)	306, 420, 999, 1278, 1389, 1453, 1524, 1698
Hsp92II	CATG	6 cut(s)	284, 392, 622, 812, 826, 1401
HspAI	GCGC	1 cut(s)	567
Kzo9I	GATC	3 cut(s)	733, 1074, 1122
LmnI	GCTCC	3 cut(s)	301, 1196, 1398
Lsp1109I	GCAGC	4 cut(s)	556, 754, 1658, 1661
LweI	GCATC	2 cut(s)	134, 691
MaeI	CTAG	3 cut(s)	437, 773, 1440
MaeIII	GTNAC	7 cut(s)	88, 154, 1249, 1348, 1442, 1654, 1666
MalI	GATC	3 cut(s)	735, 1076, 1124
MbiI	CCGCTC	1 cut(s)	32
MboI	GATC	3 cut(s)	733, 1074, 1122
MboII	GAAGA	6 cut(s)	236, 974, 1154, 1421, 1463, 1594
MfeI	CAATTG	2 cut(s)	879, 970
MflI	RGATCY	1 cut(s)	1122
MhlI	GDGCHC	2 cut(s)	1322, 1395
MlyI	GAGTC	2 cut(s)	389, 1379
MmeI	TCCRAC	2 cut(s)	304, 1144
Mph1103I	ATGCAT	1 cut(s)	706
MroXI	GAANNNNTTC	2 cut(s)	645, 1149
MseI	TTAA	5 cut(s)	609, 692, 933, 1335, 1629
MslI	CAYNNNNRTG	1 cut(s)	821
MspA1I	CMGCKG	1 cut(s)	337
MspI	CCGG	1 cut(s)	369
MspR9I	CCNGG	3 cut(s)	140, 983, 1085
MunI	CAATTG	2 cut(s)	879, 970
Mva1269I	GAATGC	2 cut(s)	409, 977
MvaI	CCWGG	3 cut(s)	140, 983, 1085
MwoI	GCNNNNNNNGC	4 cut(s)	38, 61, 70, 1326
NdeI	CATATG	3 cut(s)	537, 748, 1008
NdeII	GATC	3 cut(s)	733, 1074, 1122
NlaIII	CATG	6 cut(s)	284, 392, 622, 812, 826, 1401
NlaIV	GGNNCC	2 cut(s)	303, 1243
NmuCI	GTSAC	3 cut(s)	88, 1249, 1654
NsiI	ATGCAT	1 cut(s)	706
PaeR7I	CTCGAG	1 cut(s)	56
PctI	GAATGC	2 cut(s)	409, 977
PdmI	GAANNNNTTC	2 cut(s)	645, 1149
PfeI	GAWTC	5 cut(s)	116, 728, 1206, 1268, 1520
PfoI	TCCNGGA	2 cut(s)	981, 1083
PkrI	GCNGC	5 cut(s)	31, 571, 769, 1648, 1651
PleI	GAGTC	2 cut(s)	388, 1379
PpsI	GAGTC	2 cut(s)	388, 1379
PpuMI	RGGWCCY	1 cut(s)	13
PsiI	TTATAA	1 cut(s)	863
Psp124BI	GAGCTC	2 cut(s)	1322, 1395
Psp5II	RGGWCCY	1 cut(s)	13
Psp6I	CCWGG	3 cut(s)	138, 981, 1083
PspFI	CCCAGC	1 cut(s)	888
PspGI	CCWGG	3 cut(s)	138, 981, 1083
PspN4I	GGNNCC	2 cut(s)	303, 1243
PspPI	GGNCC	2 cut(s)	13, 500
PspPPI	RGGWCCY	1 cut(s)	13
PstI	CTGCAG	1 cut(s)	574
PsuI	RGATCY	1 cut(s)	1122
RsaI	GTAC	6 cut(s)	830, 1013, 1149, 1178, 1493, 1504
RsaNI	GTAC	6 cut(s)	829, 1012, 1148, 1177, 1492, 1503
RseI	CAYNNNNRTG	1 cut(s)	821
SacI	GAGCTC	2 cut(s)	1322, 1395
SaqAI	TTAA	5 cut(s)	609, 692, 933, 1335, 1629
SatI	GCNGC	5 cut(s)	30, 570, 768, 1647, 1650
Sau3AI	GATC	3 cut(s)	733, 1074, 1122
Sau96I	GGNCC	2 cut(s)	13, 500
ScaI	AGTACT	2 cut(s)	1149, 1178
SchI	GAGTC	2 cut(s)	389, 1379
ScrFI	CCNGG	3 cut(s)	140, 983, 1085
SduI	GDGCHC	2 cut(s)	1322, 1395
SfaNI	GCATC	2 cut(s)	134, 691
SfcI	CTRYAG	5 cut(s)	312, 570, 1154, 1254, 1576
Sfr274I	CTCGAG	1 cut(s)	56
SinI	GGWCC	2 cut(s)	13, 500
SlaI	CTCGAG	1 cut(s)	56
SmiMI	CAYNNNNRTG	1 cut(s)	821
SmlI	CTYRAG	1 cut(s)	56
SmoI	CTYRAG	1 cut(s)	56
SsiI	CCGC	3 cut(s)	30, 39, 335
SspI	AATATT	1 cut(s)	481
SspMI	CTAG	3 cut(s)	437, 773, 1440
SstI	GAGCTC	2 cut(s)	1322, 1395
StyD4I	CCNGG	3 cut(s)	138, 981, 1083
StyI	CCWWGG	1 cut(s)	1285
TaaI	ACNGT	3 cut(s)	160, 856, 923
TaqI	TCGA	2 cut(s)	57, 960
TaqII	GACCGA	1 cut(s)	488
TatI	WGTACW	3 cut(s)	1147, 1176, 1491
TauI	GCSGC	1 cut(s)	32
TfiI	GAWTC	5 cut(s)	116, 728, 1206, 1268, 1520
Tru1I	TTAA	5 cut(s)	609, 692, 933, 1335, 1629
Tru9I	TTAA	5 cut(s)	609, 692, 933, 1335, 1629
TscAI	CASTG	4 cut(s)	418, 525, 859, 1659
TseFI	GTSAC	3 cut(s)	88, 1249, 1654
TseI	GCWGC	4 cut(s)	569, 767, 1646, 1649
Tsp45I	GTSAC	3 cut(s)	88, 1249, 1654
TspDTI	ATGAA	6 cut(s)	56, 197, 216, 237, 735, 1013
TspGWI	ACGGA	1 cut(s)	1430
TspRI	CASTG	4 cut(s)	418, 525, 859, 1659
VpaK11BI	GGWCC	2 cut(s)	13, 500
XagI	CCTNNNNNAGG	1 cut(s)	1334
XapI	RAATTY	3 cut(s)	361, 665, 1625
XhoI	CTCGAG	1 cut(s)	56
XmiI	GTMKAC	4 cut(s)	383, 396, 1482, 1575
XmnI	GAANNNNTTC	2 cut(s)	645, 1149
XspI	CTAG	3 cut(s)	437, 773, 1440
ZrmI	AGTACT	2 cut(s)	1149, 1178
Zsp2I	ATGCAT	1 cut(s)	706

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.