Rmu_sc0003615.1_g000003
ERF Family

mTERF

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003615.1
Physical Location & Seq
Forward (+)
9112 .. 22638
13527 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003615.1_g000003.1.cds

Sequence Viewer

Length: 5049 bp
atggagggatttgcttcacatttgggtagaagactcatcagcagcaccgaaatccaagccggcctagacgattctacagtctctttacctggttcacccatgtgggctttccccagaagccgccattgtggcatcccacaaggtaaaatcagactccgttttagcccttcagatgcccagatctcaaaggtggtcccgaagccgccggtggaaaacaacgacgtggtgggagttccgaagaatggggtggaactaggagtgaagaaggacggggtcgtcgacggagtgccgaaggctgcagcctggaagcaatcggtttccactttgcgtagttttgtcacattaaatgggcacccagtcgggggaatggcttcgcattttggtcctcaaaagcagttgttttgtacaagactcaccggcaggtccgaaatcccagccggccaagatgattctacagtctcctacctggttaactcgtgtgggttgtccccagaatccgctactctagtatcccacacggtaaagcttcaatcttttgagaaaccagactccgttttggcgcttttgaaacgctatgaattctcagaggcccagatttcaaaggttgtgcggagactcccacatattcttttggccgatgtggagcaaacccttttgccaaacctcgagttttactgctccataggaatgtcaaggctccaccttgcaagaacactgagctacaacccatggctcatgagtctaagcttgaaaaaccatattgtaccaacttatagcttcttcaagagcgtggtgctctctgatgtcaaagtgatccatattttgaagcacaagtcctggattttcagggaaaatttatccaagaatttgatacccaatattgagcttgtgagagaattgggcattccccagtcctgtattgccctcttgctaactagttatactgatgtagtgatgaaaaagcctgaattgttcagtcaacttgtgcatcaagtcacagaaatgggatttgaccctcaaaatttgagctttgtgcaggccatacacgcattatatgggaaagagacgacatggaaacgatgtcaagaggtttataggaggtggggttggtctgagaatcatatacattctgctttcagggtgtctccactgtgtatggttatgtcagaggagaaactaatggcaacaatggatttcttagtgaacaagatggggtggcagtcacaaacaattgcgaaatatccccatgttttgagttacagcttgcagaagagattcatcccgaggttttcagttgttcgagttttgtttttgaaaggattgatagaagaggagaacttgagtttggctactgggatttcaaagtcagagaagtacttcttggataggccagcggtttggagaaggaagtctgcaagggaacgtgggcgacgtcagcaaaacaggggagaaggagacgcgccagcttgggaagtgagggacaaaccattgacgcgtggcgccacaattgttgatgggggagtttgttctccagatcgaaggtttcggtgtccggtggcagggattgttgctgtggaagcaaccaaacttgttagtgaccataatgatatttttattgtgggctacactaagcctcctgatgatttcaaagttgatgatcacagttttgatttccacagaattttcattaaagcactgattgcgttctacttgaaatacattgatcagttgcccagccttggaaggtatgatgatagtcatgctaaagtttcgtctaccattttgaatgatgaaaattatatgtttgtgactgttgtgaatctatgcactgctttagtttttaagtactgtccaattggtatagttgaggtaccaaagaagtggtttttggatgcgacaagtatgaattctcatatcatagaagtgatgagttttgcttttgagttgctaatgcatcaacacatgtggttacgttgcatctcaagtcgtcttgtccacattgcttctgtaacagagtcttgctcaggaaattctgaaattccatttggcacttactatcctataaaacctaatgaacttttcatcatagctgtgtatctctactggcaattgaagacacaacgcattgatgatgtagccaacaatcttattacacaagctgcattcaatgacaaattggacattttccagtcaagttatttaagtggaggtattgtagtctcctctgatatgcgtgatttggatgatagtgctttcaatgataatgctgggaatttgcatcctgatgacgcatttgggaaaatggtaagggatgccaatttgtttcatgaatatatgaacatgcttgcgaaaatgcttttcaagagtggtagtaaggagcgggtgaatttaaatgttagtataatggatacaattgttgctgcattatgtggagagagcatcaagatggatgagcaatttggaacaatgattgttgctgctatcgacaaggctggacaaaaagctaagaaaaaacaagtggaggatattattgttgttggtatgactgccaaattgaatactgtgagtaatagcatgggcattagtacgggtaatagggagcctgagattcaaagcacggaaggggtgtctagtgtgatgtggaagaataatgctcaatcacatcatttccagcacactgactttggtaatggttcatctgttgggaacttacttctctattctgaggttcttacttccatggaagttgacaacggattcttgaatggtaattttctgcttttacctcttgagaacatgagtttgcttcttgctgataagtgggagataatggacaaaattgtgaaaatgatgtttgttgacaattgggagagatggaaatatttagtaattgcagcaaataagaatggtactaaagagttgcatatgaatctctttgaaaaccatatggagccgcatgagaagtgttcggggtatgctatgttaggtgttatagttgctgtgcctaccttggatgttcttcatataatgcagaagttgggattcaaacccaattatcacaatttccttcggttattctcaacttatgttagtgtgtttgttgtgagaaaagtatttacaagtttgaagttgttgcaaaatgagtatcaatataattcagtagatgtcaaggttgttgttgcaagtgcaattattcaattgcatttaattaaagctactgagttatacaagggaatggacaatcttgtgagagcttttgagatatgtgtatcatctaatgatttggccaaccatcattcctcaaatggtccacaagttttaattgagcagatcattgatattgaatttggtgtggatatgtacggagcaactatggtacattggctcgctaattatgatgcaggactcaattggcaaggagcaaaggaaaacagtacatggtttatcaaaatgcttggctttcatcattttagcactaacaaagtgctccagcaacacacttgtctgcagcatctgcaactggttattaggaaactcactcaggcagaaactcagatttatgaaggaagctgcattaatggatctgtcacaataacaaaagagaagcaactcaaagctatgctaattgacactagcttgggtaatgacttggatgatgaagcagggagactagctaaggtactgactgacatagatcaagcctctcaagcttggttatttgcgtggatgaccttttcacttgccccctttctgattcttggtgcactattgatatatgtcacacatgcaatgagtaccattgcttcatcatttgttcaggtcggtattgaggttgacaagtacgtcaatgttcaacctttaacagttattgctaagatcactgcttttccttattttccttccattgcaatgacatttctgagcttggatcctggggatcctaacatgggtattgtaccgttctggcagaacgatgtggcgggtcgaatggaaggccagatccgaggtggtgctctgcagtggttgcacgaagatggtggatgcgagttgatctacagtggttcagagatgggagaatttccagttctgatcggggcgtggtggctagtagtacagcgtcttgggacaattggtgttggccagacgcgatctgtcttgaacagtgaaaaggtgaacagtattgaccgggcaagaaaaaaaacgggtgcaaacccatgtccagtgacagtgaatagtaacttgaccggtcgaattcttgacttctcgaactctgttttagcccttttgagacactgtgaattctcagatacccagatctcaactcttgtgcggaaatacccaagaattctagtggccgatgccaagaagacccttgtcccaaagcttgagtttttctgctccgtaggaatttcaaggctcgaccttgcgagagccctgacctactacaacccatcgatcttgagtggaagcttgaaaaaccatatagtacacacttatagcttcgtcaagagcgcgaaaacgagctttgtggaggccttgcatgcatggaaacgatgtcaagaggcttataggagctggaaacgacatggaaaccattgtgtatggttggttatgtcggagaagaaaataatgggaataatggatttcttagtcaacaagatggggtggcattcccagaagattgcaatatcccaatgttttgtgttactgcttggagaagagaatcatcccaacttcccaaggtgctcggttttgagagttttgatcttgaaaggattgatagaagagaagaagttgagtttggctactgttattattaagccagagaagtacttgttaaataggtatacatggcacaaaaaggtggaggtcggaggtcgagcgaggcctggtggcatgcgaacccagcccataccgatagactcaggagggaacacatacgtgaggcacgatctcgctttctctgataaggaaacgagtattgcctcagtgggtcaggcagagaggcaaagacctccttatgtacatgctcctccagaaatcgcctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1682

Amino Acids

189.15

Weight (kDa)

8.67

Isoelectric Point (pI)

37.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 275, 3842
AatII GACGTC 1 cut(s) 1435
Acc36I ACCTGC 1 cut(s) 411
Acc65I GGTACC 1 cut(s) 1870
AccB1I GGYRCC 3 cut(s) 351, 1499, 1870
AccBSI CCGCTC 1 cut(s) 2380
AccI GTMKAC 3 cut(s) 279, 1775, 4847
AccII CGCG 4 cut(s) 1460, 1495, 4147, 4514
AciI CCGC 9 cut(s) 121, 203, 498, 610, 1394, 2380, 2954, 3980, 4330
AclWI GGATC 7 cut(s) 808, 3589, 3923, 3932, 3936, 3945, 3994
AcoI YGGCCR 5 cut(s) 439, 633, 3285, 4138, 4353
AcuI CTGAAG 1 cut(s) 153
AcyI GRCGYC 2 cut(s) 1432, 1500
AfiI CCNNNNNNNGG 6 cut(s) 242, 361, 362, 1559, 1739, 3947
AflIII ACRYGT 2 cut(s) 1493, 1962
AgeI ACCGGT 1 cut(s) 4244
AhlI ACTAGT 1 cut(s) 935
AjiI CACGTC 1 cut(s) 223
AjnI CCWGG 6 cut(s) 88, 302, 465, 836, 3931, 4888
AleI CACNNNNGTG 2 cut(s) 100, 4940
Alw21I GWGCWC 5 cut(s) 798, 3489, 3766, 4015, 4748
Alw26I GTCTC 9 cut(s) 85, 463, 607, 1058, 1149, 1449, 2224, 3661, 4282
Alw44I GTGCAC 1 cut(s) 3762
AlwI GGATC 7 cut(s) 808, 3589, 3923, 3932, 3936, 3945, 3994
AlwNI CAGNNNCTG 1 cut(s) 3514
Ama87I CYCGRG 2 cut(s) 665, 1282
ApaLI GTGCAC 1 cut(s) 3762
ApeKI GCWGC 9 cut(s) 42, 296, 299, 2159, 2420, 2477, 2894, 3508, 3570
AseI ATTAAT 1 cut(s) 3576
AsiGI ACCGGT 1 cut(s) 4244
Asp700I GAANNNNTTC 3 cut(s) 370, 1274, 1376
Asp718I GGTACC 1 cut(s) 1870
AspLEI GCGC 4 cut(s) 562, 1462, 1502, 4514
AspS9I GGNCC 5 cut(s) 193, 383, 423, 589, 3308
AsuC2I CCSGG 1 cut(s) 4187
AsuHPI GGTGA 4 cut(s) 87, 406, 2395, 4183
AvaI CYCGRG 2 cut(s) 665, 1282
AvaII GGWCC 4 cut(s) 193, 383, 423, 3308
BaeGI GKGCMC 2 cut(s) 354, 3766
BaeI ACNNNNGTAYC 4 cut(s) 492, 525, 2400, 2433
BalI TGGCCA 2 cut(s) 3287, 4140
BamHI GGATCC 2 cut(s) 3928, 3937
BanI GGYRCC 3 cut(s) 351, 1499, 1870
BanII GRGCYC 1 cut(s) 4435
BarI GAAGNNNNNNTAC 2 cut(s) 3787, 3819
BauI CACGAG 1 cut(s) 475
BbsI GAAGAC 3 cut(s) 37, 2120, 4373
Bbv12I GWGCWC 5 cut(s) 798, 3489, 3766, 4015, 4748
BbvI GCAGC 9 cut(s) 54, 283, 311, 2146, 2407, 2464, 2906, 3520, 3557
BccI CCATC 9 cut(s) 1204, 1508, 2440, 2868, 3300, 4028, 4063, 4459, 4654
BciT130I CCWGG 6 cut(s) 90, 304, 467, 838, 3933, 4890
BciVI GTATCC 2 cut(s) 520, 2401
BclI TGATCA 2 cut(s) 1657, 1723
BcnI CCSGG 1 cut(s) 4187
BcoDI GTCTC 9 cut(s) 85, 463, 607, 1058, 1149, 1449, 2224, 3661, 4282
BcuI ACTAGT 1 cut(s) 935
BfaI CTAG 9 cut(s) 65, 254, 506, 936, 2631, 3633, 3671, 4106, 4349
BfmI CTRYAG 6 cut(s) 75, 297, 453, 3506, 4016, 4054
BfoI RGCGCY 2 cut(s) 563, 1503
BfuAI ACCTGC 1 cut(s) 411
BfuI GTATCC 2 cut(s) 520, 2401
BglI GCCNNNNNGGC 1 cut(s) 129
BglII AGATCT 2 cut(s) 180, 4314
BmcAI AGTACT 3 cut(s) 1376, 1847, 4832
Bme1390I CCNGG 7 cut(s) 90, 304, 467, 838, 3933, 4187, 4890
Bme18I GGWCC 4 cut(s) 193, 383, 423, 3308
BmeT110I CYCGRG 2 cut(s) 665, 1282
BmgBI CACGTC 1 cut(s) 223
BmgT120I GGNCC 5 cut(s) 193, 383, 423, 589, 3308
BmiI GGNNCC 9 cut(s) 195, 353, 698, 1501, 1872, 2601, 2952, 3930, 3939
BmrFI CCNGG 7 cut(s) 90, 304, 467, 838, 3933, 4187, 4890
BmrI ACTGGG 3 cut(s) 350, 904, 1362
BmuI ACTGGG 3 cut(s) 350, 904, 1362
BoxI GACNNNNGTC 1 cut(s) 4373
BpiI GAAGAC 3 cut(s) 37, 2120, 4373
BplI GAGNNNNNCTC 2 cut(s) 2006, 2038
BpmI CTGGAG 3 cut(s) 1515, 3473, 5019
Bpu10I CCTNAGC 2 cut(s) 2023, 3675
BpuEI CTTGAG 6 cut(s) 1360, 1966, 2810, 3690, 4406, 4480
BpuMI CCSGG 1 cut(s) 4187
Bsa29I ATCGAT 1 cut(s) 4454
BsaAI YACGTR 1 cut(s) 4942
BsaHI GRCGYC 2 cut(s) 1432, 1500
BsaJI CCNNGG 8 cut(s) 728, 1283, 1738, 2739, 3009, 3932, 4003, 4739
BsaWI WCCGGW 2 cut(s) 1552, 4244
BsaXI ACNNNNNCTCC 6 cut(s) 1090, 1120, 1618, 1648, 2199, 2229
Bsc4I CCNNNNNNNGG 6 cut(s) 242, 361, 362, 1559, 1739, 3947
Bse118I RCCGGY 5 cut(s) 59, 205, 416, 437, 4244
Bse1I ACTGG 8 cut(s) 356, 910, 1357, 2108, 2188, 3525, 4082, 4220
Bse3DI GCAATG 5 cut(s) 1998, 3795, 3798, 3903, 3915
BseBI CCWGG 6 cut(s) 90, 304, 467, 838, 3933, 4890
BseCI ATCGAT 1 cut(s) 4454
BseDI CCNNGG 8 cut(s) 728, 1283, 1738, 2739, 3009, 3932, 4003, 4739
BseLI CCNNNNNNNGG 6 cut(s) 242, 361, 362, 1559, 1739, 3947
BseMI GCAATG 5 cut(s) 1998, 3795, 3798, 3903, 3915
BseNI ACTGG 8 cut(s) 356, 910, 1357, 2108, 2188, 3525, 4082, 4220
BseRI GAGGAG 4 cut(s) 1184, 1346, 2212, 5022
BseSI GKGCMC 2 cut(s) 354, 3766
BseXI GCAGC 9 cut(s) 54, 283, 311, 2146, 2407, 2464, 2906, 3520, 3557
BseYI CCCAGC 4 cut(s) 433, 1733, 2267, 4905
BsgI GTGCAG 1 cut(s) 1055
Bsh1236I CGCG 4 cut(s) 1460, 1495, 4147, 4514
Bsh1285I CGRYCG 1 cut(s) 4249
BshNI GGYRCC 3 cut(s) 351, 1499, 1870
BshTI ACCGGT 1 cut(s) 4244
BshVI ATCGAT 1 cut(s) 4454
BsiEI CGRYCG 1 cut(s) 4249
BsiHKAI GWGCWC 5 cut(s) 798, 3489, 3766, 4015, 4748
BsiHKCI CYCGRG 2 cut(s) 665, 1282
BsiSI CCGG 7 cut(s) 60, 206, 417, 438, 1553, 4186, 4245
BslFI GGGAC 5 cut(s) 179, 472, 1493, 4138, 4361
BslI CCNNNNNNNGG 6 cut(s) 242, 361, 362, 1559, 1739, 3947
BsmAI GTCTC 9 cut(s) 85, 463, 607, 1058, 1149, 1449, 2224, 3661, 4282
BsmBI CGTCTC 2 cut(s) 1058, 1449
BsmFI GGGAC 5 cut(s) 179, 472, 1493, 4138, 4361
BsmI GAATGC 3 cut(s) 903, 2162, 4669
BsoBI CYCGRG 2 cut(s) 665, 1282
Bsp1286I GDGCHC 7 cut(s) 354, 798, 3489, 3766, 4015, 4435, 4748
Bsp1407I TGTACA 2 cut(s) 404, 5023
Bsp19I CCATGG 2 cut(s) 728, 2739
BspACI CCGC 9 cut(s) 121, 203, 498, 610, 1394, 2380, 2954, 3980, 4330
BspDI ATCGAT 1 cut(s) 4454
BspFNI CGCG 4 cut(s) 1460, 1495, 4147, 4514
BspHI TCATGA 2 cut(s) 735, 2326
BspLI GGNNCC 9 cut(s) 195, 353, 698, 1501, 1872, 2601, 2952, 3930, 3939
BspMAI CTGCAG 3 cut(s) 301, 3510, 4020
BspMI ACCTGC 1 cut(s) 411
BspPI GGATC 7 cut(s) 808, 3589, 3923, 3932, 3936, 3945, 3994
BspT107I GGYRCC 3 cut(s) 351, 1499, 1870
BsrBI CCGCTC 1 cut(s) 2380
BsrDI GCAATG 5 cut(s) 1998, 3795, 3798, 3903, 3915
BsrFI RCCGGY 5 cut(s) 59, 205, 416, 437, 4244
BsrGI TGTACA 2 cut(s) 404, 5023
BsrI ACTGG 8 cut(s) 356, 910, 1357, 2108, 2188, 3525, 4082, 4220
BssAI RCCGGY 5 cut(s) 59, 205, 416, 437, 4244
BssECI CCNNGG 8 cut(s) 728, 1283, 1738, 2739, 3009, 3932, 4003, 4739
BssNAI GTATAC 1 cut(s) 4848
BssNI GRCGYC 2 cut(s) 1432, 1500
BssSI CACGAG 1 cut(s) 475
BssT1I CCWWGG 5 cut(s) 728, 1738, 2739, 3009, 4739
Bst1107I GTATAC 1 cut(s) 4848
Bst2BI CACGAG 1 cut(s) 475
Bst2UI CCWGG 6 cut(s) 90, 304, 467, 838, 3933, 4890
Bst6I CTCTTC 4 cut(s) 1265, 1323, 4713, 4779
BstACI GRCGYC 2 cut(s) 1432, 1500
BstAPI GCANNNNNTGC 3 cut(s) 1700, 3514, 4024
BstAUI TGTACA 2 cut(s) 404, 5023
BstBAI YACGTR 1 cut(s) 4942
BstDSI CCRYGG 2 cut(s) 728, 2739
BstFNI CGCG 4 cut(s) 1460, 1495, 4147, 4514
BstH2I RGCGCY 2 cut(s) 563, 1503
BstHHI GCGC 4 cut(s) 562, 1462, 1502, 4514
BstMAI GTCTC 9 cut(s) 85, 463, 607, 1058, 1149, 1449, 2224, 3661, 4282
BstMCI CGRYCG 1 cut(s) 4249
BstNI CCWGG 6 cut(s) 90, 304, 467, 838, 3933, 4890
BstNSI RCATGY 6 cut(s) 1966, 2344, 3788, 4544, 4900, 5030
BstPAI GACNNNNGTC 1 cut(s) 4373
BstSCI CCNGG 7 cut(s) 88, 302, 465, 836, 3931, 4185, 4888
BstSFI CTRYAG 6 cut(s) 75, 297, 453, 3506, 4016, 4054
BstSLI GKGCMC 2 cut(s) 354, 3766
BstUI CGCG 4 cut(s) 1460, 1495, 4147, 4514
BstV1I GCAGC 9 cut(s) 54, 283, 311, 2146, 2407, 2464, 2906, 3520, 3557
BstV2I GAAGAC 3 cut(s) 37, 2120, 4373
BstX2I RGATCY 6 cut(s) 180, 3581, 3928, 3937, 3999, 4314
BstXI CCANNNNNNTGG 2 cut(s) 1398, 1881
BstYI RGATCY 6 cut(s) 180, 3581, 3928, 3937, 3999, 4314
BstZ17I GTATAC 1 cut(s) 4848
Bsu15I ATCGAT 1 cut(s) 4454
BsuI GTATCC 2 cut(s) 520, 2401
BsuTUI ATCGAT 1 cut(s) 4454
BtgI CCRYGG 2 cut(s) 728, 2739
BtrI CACGTC 1 cut(s) 223
BtsI GCAGTG 3 cut(s) 1827, 3879, 4025
BveI ACCTGC 1 cut(s) 411
CaiI CAGNNNCTG 1 cut(s) 3514
CciI TCATGA 2 cut(s) 735, 2326
CfoI GCGC 4 cut(s) 562, 1462, 1502, 4514
Cfr10I RCCGGY 5 cut(s) 59, 205, 416, 437, 4244
Cfr13I GGNCC 5 cut(s) 193, 383, 423, 589, 3308
ClaI ATCGAT 1 cut(s) 4454
CseI GACGC 5 cut(s) 1466, 1501, 2297, 4106, 4153
CsiI ACCWGGT 2 cut(s) 88, 465
CspAI ACCGGT 1 cut(s) 4244
CspCI CAANNNNNGTGG 4 cut(s) 1492, 1527, 1946, 1981
DinI GGCGCC 1 cut(s) 1501
DraI TTTAAA 1 cut(s) 2391
DrdI GACNNNNNNGTC 2 cut(s) 275, 3842
DseDI GACNNNNNNGTC 2 cut(s) 275, 3842
EaeI YGGCCR 5 cut(s) 439, 633, 3285, 4138, 4353
Eam1104I CTCTTC 4 cut(s) 1265, 1323, 4713, 4779
EarI CTCTTC 4 cut(s) 1265, 1323, 4713, 4779
Eco130I CCWWGG 5 cut(s) 728, 1738, 2739, 3009, 4739
Eco147I AGGCCT 2 cut(s) 4535, 4888
Eco24I GRGCYC 1 cut(s) 4435
Eco47I GGWCC 4 cut(s) 193, 383, 423, 3308
Eco57I CTGAAG 1 cut(s) 153
Eco88I CYCGRG 2 cut(s) 665, 1282
EcoRI GAATTC 5 cut(s) 578, 1906, 4251, 4298, 4344
EcoRII CCWGG 6 cut(s) 88, 302, 465, 836, 3931, 4888
EcoT14I CCWWGG 5 cut(s) 728, 1738, 2739, 3009, 4739
EcoT22I ATGCAT 2 cut(s) 1956, 4546
EcoT38I GRGCYC 1 cut(s) 4435
EgeI GGCGCC 1 cut(s) 1501
EheI GGCGCC 1 cut(s) 1501
ErhI CCWWGG 5 cut(s) 728, 1738, 2739, 3009, 4739
Esp3I CGTCTC 2 cut(s) 1058, 1449
FalI AAGNNNNNCTT 4 cut(s) 1364, 1396, 5002, 5034
FaqI GGGAC 5 cut(s) 179, 472, 1493, 4138, 4361
FauI CCCGC 2 cut(s) 2373, 3973
FauNDI CATATG 2 cut(s) 2925, 2946
FbaI TGATCA 2 cut(s) 1657, 1723
FblI GTMKAC 3 cut(s) 279, 1775, 4847
FriOI GRGCYC 1 cut(s) 4435
FspBI CTAG 9 cut(s) 65, 254, 506, 936, 2631, 3633, 3671, 4106, 4349
GlaI GCGC 4 cut(s) 561, 1461, 1501, 4513
GsaI CCCAGC 4 cut(s) 437, 1737, 2271, 4909
GsuI CTGGAG 3 cut(s) 1515, 3473, 5019
HaeII RGCGCY 2 cut(s) 563, 1503
HapII CCGG 7 cut(s) 60, 206, 417, 438, 1553, 4186, 4245
HgaI GACGC 5 cut(s) 1466, 1501, 2297, 4106, 4153
HhaI GCGC 4 cut(s) 562, 1462, 1502, 4514
Hin1I GRCGYC 2 cut(s) 1432, 1500
Hin6I GCGC 4 cut(s) 560, 1460, 1500, 4512
HinP1I GCGC 4 cut(s) 560, 1460, 1500, 4512
HincII GTYRAC 7 cut(s) 280, 472, 980, 2749, 2860, 3835, 4654
HindII GTYRAC 7 cut(s) 280, 472, 980, 2749, 2860, 3835, 4654
HindIII AAGCTT 5 cut(s) 524, 745, 3708, 4382, 4468
HpaI GTTAAC 1 cut(s) 472
HpaII CCGG 7 cut(s) 60, 206, 417, 438, 1553, 4186, 4245
HphI GGTGA 4 cut(s) 87, 406, 2395, 4183
Hpy99I CGWCG 4 cut(s) 224, 281, 284, 1434
HpyCH4IV ACGT 6 cut(s) 222, 1423, 1432, 1972, 3843, 4941
HpySE526I ACGT 6 cut(s) 222, 1423, 1432, 1972, 3843, 4941
Hsp92I GRCGYC 2 cut(s) 1432, 1500
HspAI GCGC 4 cut(s) 560, 1460, 1500, 4512
KasI GGCGCC 1 cut(s) 1499
KpnI GGTACC 1 cut(s) 1874
KroI GCCGGC 2 cut(s) 59, 437
KroNI GCCGGC 2 cut(s) 61, 439
Ksp22I TGATCA 2 cut(s) 1657, 1723
KspAI GTTAAC 1 cut(s) 472
Lsp1109I GCAGC 9 cut(s) 54, 283, 311, 2146, 2407, 2464, 2906, 3520, 3557
MabI ACCWGGT 2 cut(s) 88, 465
MaeI CTAG 9 cut(s) 65, 254, 506, 936, 2631, 3633, 3671, 4106, 4349
MaeII ACGT 6 cut(s) 222, 1423, 1432, 1972, 3843, 4941
MbiI CCGCTC 1 cut(s) 2380
MfeI CAATTG 9 cut(s) 1230, 1506, 1854, 2108, 2412, 2863, 3197, 3409, 4128
MflI RGATCY 6 cut(s) 180, 3581, 3928, 3937, 3999, 4314
MhlI GDGCHC 7 cut(s) 354, 798, 3489, 3766, 4015, 4435, 4748
MlsI TGGCCA 2 cut(s) 3287, 4140
MluI ACGCGT 1 cut(s) 1493
MluNI TGGCCA 2 cut(s) 3287, 4140
Mly113I GGCGCC 1 cut(s) 1500
MlyI GAGTC 9 cut(s) 27, 147, 405, 542, 609, 748, 2024, 3399, 4916
MmeI TCCRAC 2 cut(s) 4596, 4852
Mox20I TGGCCA 2 cut(s) 3287, 4140
Mph1103I ATGCAT 2 cut(s) 1956, 4546
MroNI GCCGGC 2 cut(s) 59, 437
MroXI GAANNNNTTC 3 cut(s) 370, 1274, 1376
MscI TGGCCA 2 cut(s) 3287, 4140
Msp20I TGGCCA 2 cut(s) 3287, 4140
MspA1I CMGCKG 1 cut(s) 1394
MspI CCGG 7 cut(s) 60, 206, 417, 438, 1553, 4186, 4245
MspR9I CCNGG 7 cut(s) 90, 304, 467, 838, 3933, 4187, 4890
MunI CAATTG 9 cut(s) 1230, 1506, 1854, 2108, 2412, 2863, 3197, 3409, 4128
Mva1269I GAATGC 3 cut(s) 903, 2162, 4669
MvaI CCWGG 6 cut(s) 90, 304, 467, 838, 3933, 4890
MvnI CGCG 4 cut(s) 1460, 1495, 4147, 4514
NaeI GCCGGC 2 cut(s) 61, 439
NarI GGCGCC 1 cut(s) 1500
NciI CCSGG 1 cut(s) 4187
NcoI CCATGG 2 cut(s) 728, 2739
NdeI CATATG 2 cut(s) 2925, 2946
NgoMIV GCCGGC 2 cut(s) 59, 437
NlaIV GGNNCC 9 cut(s) 195, 353, 698, 1501, 1872, 2601, 2952, 3930, 3939
NmuCI GTSAC 8 cut(s) 337, 994, 1221, 1595, 1807, 3586, 3778, 4222
NsiI ATGCAT 2 cut(s) 1956, 4546
NspI RCATGY 6 cut(s) 1966, 2344, 3788, 4544, 4900, 5030
OliI CACNNNNGTG 2 cut(s) 100, 4940
PacI TTAATTAA 1 cut(s) 3210
PaeI GCATGC 2 cut(s) 4544, 4900
PaeR7I CTCGAG 1 cut(s) 665
PagI TCATGA 2 cut(s) 735, 2326
PceI AGGCCT 2 cut(s) 4535, 4888
PciI ACATGT 1 cut(s) 1962
PcsI WCGNNNNNNNCGW 3 cut(s) 276, 1429, 4947
PctI GAATGC 3 cut(s) 903, 2162, 4669
PdiI GCCGGC 2 cut(s) 61, 439
PdmI GAANNNNTTC 3 cut(s) 370, 1274, 1376
PflFI GACNNNGTC 1 cut(s) 272
PfoI TCCNGGA 1 cut(s) 836
PinAI ACCGGT 1 cut(s) 4244
PleI GAGTC 9 cut(s) 27, 147, 405, 542, 609, 747, 2023, 3399, 4916
PluTI GGCGCC 1 cut(s) 1503
PpsI GAGTC 9 cut(s) 27, 147, 405, 542, 609, 747, 2023, 3399, 4916
Ppu21I YACGTR 1 cut(s) 4942
PscI ACATGT 1 cut(s) 1962
PshAI GACNNNNGTC 1 cut(s) 4373
PshBI ATTAAT 1 cut(s) 3576
Psp6I CCWGG 6 cut(s) 88, 302, 465, 836, 3931, 4888
PspFI CCCAGC 4 cut(s) 433, 1733, 2267, 4905
PspGI CCWGG 6 cut(s) 88, 302, 465, 836, 3931, 4888
PspN4I GGNNCC 9 cut(s) 195, 353, 698, 1501, 1872, 2601, 2952, 3930, 3939
PspPI GGNCC 5 cut(s) 193, 383, 423, 589, 3308
PspXI VCTCGAGB 1 cut(s) 665
PstI CTGCAG 3 cut(s) 301, 3510, 4020
PstNI CAGNNNCTG 1 cut(s) 3514
PsuI RGATCY 6 cut(s) 180, 3581, 3928, 3937, 3999, 4314
PsyI GACNNNGTC 1 cut(s) 272
SalI GTCGAC 1 cut(s) 278
Sau96I GGNCC 5 cut(s) 193, 383, 423, 589, 3308
ScaI AGTACT 3 cut(s) 1376, 1847, 4832
SchI GAGTC 9 cut(s) 27, 147, 405, 542, 609, 748, 2024, 3399, 4916
ScrFI CCNGG 7 cut(s) 90, 304, 467, 838, 3933, 4187, 4890
SduI GDGCHC 7 cut(s) 354, 798, 3489, 3766, 4015, 4435, 4748
SexAI ACCWGGT 2 cut(s) 88, 465
SfcI CTRYAG 6 cut(s) 75, 297, 453, 3506, 4016, 4054
SfoI GGCGCC 1 cut(s) 1501
Sfr274I CTCGAG 1 cut(s) 665
SgrAI CRCCGGYG 1 cut(s) 205
SgrDI CGTCGACG 1 cut(s) 278
SinI GGWCC 4 cut(s) 193, 383, 423, 3308
SlaI CTCGAG 1 cut(s) 665
SmiI ATTTAAAT 1 cut(s) 2391
SmlI CTYRAG 7 cut(s) 665, 1339, 1981, 2789, 3705, 4385, 4459
SmoI CTYRAG 7 cut(s) 665, 1339, 1981, 2789, 3705, 4385, 4459
SpeI ACTAGT 1 cut(s) 935
SphI GCATGC 2 cut(s) 4544, 4900
SseBI AGGCCT 2 cut(s) 4535, 4888
SsiI CCGC 9 cut(s) 121, 203, 498, 610, 1394, 2380, 2954, 3980, 4330
SspDI GGCGCC 1 cut(s) 1499
SspI AATATT 2 cut(s) 880, 2882
SspMI CTAG 9 cut(s) 65, 254, 506, 936, 2631, 3633, 3671, 4106, 4349
StuI AGGCCT 2 cut(s) 4535, 4888
StyD4I CCNGG 7 cut(s) 88, 302, 465, 836, 3931, 4185, 4888
StyI CCWWGG 5 cut(s) 728, 1738, 2739, 3009, 4739
SwaI ATTTAAAT 1 cut(s) 2391
TaiI ACGT 6 cut(s) 225, 1426, 1435, 1975, 3846, 4944
TatI WGTACW 8 cut(s) 404, 1374, 1845, 3434, 4111, 4486, 4830, 5023
TauI GCSGC 3 cut(s) 123, 205, 2956
TseFI GTSAC 8 cut(s) 337, 994, 1221, 1595, 1807, 3586, 3778, 4222
TseI GCWGC 9 cut(s) 42, 296, 299, 2159, 2420, 2477, 2894, 3508, 3570
Tsp45I GTSAC 8 cut(s) 337, 994, 1221, 1595, 1807, 3586, 3778, 4222
TspGWI ACGGA 7 cut(s) 146, 297, 541, 2633, 2769, 3378, 4390
Tth111I GACNNNGTC 1 cut(s) 272
VneI GTGCAC 1 cut(s) 3762
VpaK11BI GGWCC 4 cut(s) 193, 383, 423, 3308
VspI ATTAAT 1 cut(s) 3576
XceI RCATGY 6 cut(s) 1966, 2344, 3788, 4544, 4900, 5030
XcmI CCANNNNNNNNNTGG 1 cut(s) 4004
XhoI CTCGAG 1 cut(s) 665
XmiI GTMKAC 3 cut(s) 279, 1775, 4847
XmnI GAANNNNTTC 3 cut(s) 370, 1274, 1376
XspI CTAG 9 cut(s) 65, 254, 506, 936, 2631, 3633, 3671, 4106, 4349
ZraI GACGTC 1 cut(s) 1433
ZrmI AGTACT 3 cut(s) 1376, 1847, 4832
Zsp2I ATGCAT 2 cut(s) 1956, 4546
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.