Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0003456

Physical Location & Seq

Genomic Coordinates Reverse (-)

2861983 .. 2866025

Gene Structure 4043 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000000633

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2364 bp

ATGAGAGATGATAAAGATGATGAAATCGCACAAGTAGATGATGAAGATAGAGAAAGAGAACAGAATGTGGAGTGTAGCCAAGTTAACGAGATGAGTGTCCATGTTTCAAGTTCTAACGGGGAGCCTGAGGCTACAGGCTTTGTTGGAGATATATCGCTGGACATCCCAGTTATGGAAGTGAATTTGGCCGGTATCAATGAGTCTACACATGATGTAGACCCGAATGCAAGCACTGGTTCTCAGACCTGTGGTGGACTAGAAAATCAGACATTGGAAATCAATGTGGGAATACAGATCAGTGACGATGTGTTGATGCGTGAATATGTTCTCCCAGCAGAGGTTTCTGTGAATACTGAAAATGGGCTTAGTTTGATTGAGATGGCTATTGATTTGGAGAATATTGGAGTGTCGGTTATCGGTCCTCCAGTAGTGGAAGCACTGAAAGTGATGTCTCATATGCTTCAAGTAAAGTTTTCAGATTTTGGCGCTGCAGTTGTTCAGGGTGCAACCTACATAAGCCTGAAAGTTAAAGTTTACATGGTTGTTGGCTGTTGTAAAGAAATTGTTCACACTTGGTTGTCAAAATTTCCAGCAGTTCAATTTTGCAGTTTAAGTGATGATGCATTTGGAGATATTGCTGGTATGGAATCTGATCTTTTCAGTTCATATGCTGAATCATTTTGTGTTGCTCTAGTTGTTGCTTCCATTTCCTCATTTGTAATCCACCATGAGTTCACCACCATGCTGTACCCCCTCCTTGTTAGTTCTATGGGCATTCTAGTTTGTGAAATCACAACCTTGTTTGCCACTGATTTCTTTGAGATCAAACCTGTCGAGGACATTGAACTAGCTTTGAAAAAGCAGCTTATCATCTCCACTGTTCTTATAACTATTGGAATTGCAATTGATAGCTGGGTTGCTCTGCCATCATCCTTCATAATTTACAGTATAAGAGTTAAGAACATTGTAAAGAACTGCCTCATCGAAGATTTCAATTGTGCATTCCAGGAGAACATACTTACTCAGGGTCATATGTACCTGTTTATTCATTATATTTGCCTATACTCAAATATATTGAGATATGAGACCAAGAAGGTAATCCCATTCCAGGAAGCCATGAGTGTAAGAGAAGTGAAAACGGCAGGGATCTTTCCTAATGCAATAGAAGAAGTACTTCTACAGATGGTTGGAGACAAGAAGTACTCCTTTGCACGCGATGGAGCTTACAGAATCATAAATGATGTTTGGTTGCAATATGTTGATGGTGCCATAGTGACTACAGCACAACTGGAATCAATCTCTGAGAACCAAGGGAATGGAGTGGTAATTGAGAAAATGGAGAGCTCAAATCGCCTATTTAAGGAACTGGATGTTACTGACAGGAACATAATTACTCATCTTTCAAAAGACTCTGAGCTCCCACGCAAAGTTGAAGACACGGATTGTTATTGGAAATGGTTTGCTAGTAACTTGGCCTCAGGAGGTGCTTCTCCTCTTCTCTTTGTCTACTCTTTGTACTATGCTTGTACCCATTTGGCTCGTGATTCTAAGGCTACAAAGAAGGGAGGAGAACGACAATTCAATGGTCTGGTTGATGTGTACAGGAAGACATTGAAATCTGATGGTATTGCAGTTCTTCCTGTTCTTAGATTTTGTTCTAAGAAAGTGATGGGCTTGTCGATCCGCCTCAGTGTCTTGTCTGCCACTTCCCTACTAGTTTTCTTCTCTGCTCTGTTTCTCTTTAACTTTCGCTCTTTTTGGTTGTACTTCTTGTTCTTCTTCTCCACTGTTTGTATTTGCGGCTGCCTTTTGGCTTTCAAACTCAGACCAACAACACTCCACAGTAGTCCTTCAGTCACCACCAAAGTAGATATTCCTTCTTCTTCTTCTTCTCCTCCATCTGGTAAATTGACGCACGATGTGTTCCTCAGTTTCAGCGGGAAAGACACCCGCAAAAATTTCACAGACCATCTTTACACTGCTCTCAAACAGAAAGGGATATACACATTTAGAGATGATGAAGAACTTGTGAGGGGGGAATCGATTGGTCCAAATCTCTTGAAAGCAATTGAAGAGTCAAGATATGTAATTGCTGTTTTCTCAAGTAGTTATGCCGATTCTGCATGGTGTTTGGATGAGATTGCAAAGGTCGCTAAATGCATGAAAGAAATGGGACAAGTAGTCCTCCCAGTGTTCTATGATGTCGATCCATACGAGGTACGGAGAGAAAAAGGCAAACACTTTGAGAAAGCATTTCAGAAGCATCAAAAGAGGTATAAAGGCGATCCGGACAAAGTGAAGGGGTGGAAAGATGCTCTTTTTCAAGTAGGCAATCTCTCTGGATGGCATCTGCAAGATGGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_8 NB-ARC TIR

Protein Analysis

788

Amino Acids

87.94

Weight (kDa)

5.19

Isoelectric Point (pI)

37.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
H_PPase	PF03030	207 - 320	1.3e-12	Inorganic H+ pyrophosphatase
GRAM	PF02893	325 - 417	2.1e-10	GRAM domain
TIR	PF01582	639 - 785	9e-46	TIR domain
TIR_2	PF13676	641 - 737	9e-17	TIR domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003456)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g23542
rosa_chinensis	RchiOBHm_Chr1g0323881 RchiOBHm_Chr1g0363301 RchiOBHm_Chr3g0488451 RchiOBHm_Chr4g0387101 RchiOBHm_Chr4g0387111 RchiOBHm_Chr4g0402531
rosa_laevigata	RLG00000000633 RLG00000003072 RLG00000011416 RLG00000019029 RLG00000026076 RLG00000036164
rosa_multiflora	Rmu_co8181938.1_g000002 Rmu_co8182286.1_g000002 Rmu_sc0000103.1_g000012 Rmu_sc0001207.1_g000051 Rmu_sc0003615.1_g000003 Rmu_sc0004695.1_g000012 Rmu_sc0006098.1_g000005 Rmu_sc0007104.1_g000004 Rmu_sc0022560.1_g000001
rosa_roxburghii	Rroxscaffold_3G00249830 Rroxscaffold_3G00250680 Rroxscaffold_4G00290730 Rroxscaffold_4G00291010 Rroxscaffold_5G00369410 Rroxscaffold_7G00179280
rosa_rugosa	Rorug07G0054300
rosa_samantha	Rh1BG312100 Rh1CG327200 Rh1DG343700 Rh3BG375900 Rh5BG126700 Rh7AG071200 Rh7DG076500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	887
AccB1I	GGYRCC	1 cut(s)	1265
AccI	GTMKAC	3 cut(s)	203, 216, 1506
AccII	CGCG	1 cut(s)	1215
AccIII	TCCGGA	1 cut(s)	2287
AciI	CCGC	4 cut(s)	1684, 1800, 1938, 1951
AclWI	GGATC	4 cut(s)	1154, 1675, 2201, 2279
AcoI	YGGCCR	1 cut(s)	186
AcsI	RAATTY	3 cut(s)	181, 584, 1957
AcuI	CTGAAG	1 cut(s)	1836
AdeI	CACNNNGTG	1 cut(s)	1921
AfaI	GTAC	9 cut(s)	749, 1037, 1173, 1202, 1517, 1528, 1601, 1766, 2220
AfiI	CCNNNNNNNGG	5 cut(s)	172, 337, 1108, 1360, 1901
AhdI	GACNNNNNGTC	1 cut(s)	2180
AhlI	ACTAGT	1 cut(s)	1714
AjnI	CCWGG	2 cut(s)	1005, 1107
AluBI	AGCT	6 cut(s)	851, 865, 912, 1223, 1344, 1417
AluI	AGCT	6 cut(s)	851, 865, 912, 1223, 1344, 1417
Alw21I	GWGCWC	2 cut(s)	1346, 1419
Alw26I	GTCTC	3 cut(s)	456, 1079, 1185
AlwI	GGATC	4 cut(s)	1154, 1675, 2201, 2279
Aor13HI	TCCGGA	1 cut(s)	2287
AoxI	GGCC	2 cut(s)	186, 1473
ApeKI	GCWGC	3 cut(s)	488, 862, 1803
ApoI	RAATTY	3 cut(s)	181, 584, 1957
Asp700I	GAANNNNTTC	3 cut(s)	324, 564, 1173
AspLEI	GCGC	1 cut(s)	488
AspS9I	GGNCC	2 cut(s)	419, 2048
AsuHPI	GGTGA	2 cut(s)	727, 1849
AvaII	GGWCC	2 cut(s)	419, 2048
AxyI	CCTNAGG	2 cut(s)	126, 1477
BanI	GGYRCC	1 cut(s)	1265
BanII	GRGCYC	2 cut(s)	1346, 1419
BarI	GAAGNNNNNNTAC	2 cut(s)	1161, 1193
BauI	CACGAG	1 cut(s)	1539
BbsI	GAAGAC	2 cut(s)	1440, 1613
Bbv12I	GWGCWC	2 cut(s)	1346, 1419
BbvI	GCAGC	3 cut(s)	475, 874, 1790
BceAI	ACGGC	1 cut(s)	1155
BciT130I	CCWGG	2 cut(s)	1007, 1109
BcoDI	GTCTC	3 cut(s)	456, 1079, 1185
BcuI	ACTAGT	1 cut(s)	1714
BfaI	CTAG	6 cut(s)	257, 692, 779, 848, 1464, 1715
BfmI	CTRYAG	4 cut(s)	132, 489, 1178, 1278
BfoI	RGCGCY	1 cut(s)	489
BisI	GCNGC	4 cut(s)	489, 863, 1801, 1804
BlsI	GCNGC	4 cut(s)	490, 864, 1802, 1805
BmcAI	AGTACT	2 cut(s)	1173, 1202
Bme1390I	CCNGG	2 cut(s)	1007, 1109
Bme18I	GGWCC	2 cut(s)	419, 2048
BmeRI	GACNNNNNGTC	1 cut(s)	2180
BmgT120I	GGNCC	2 cut(s)	419, 2048
BmiI	GGNNCC	2 cut(s)	123, 1267
BmrFI	CCNGG	2 cut(s)	1007, 1109
BmrI	ACTGGG	2 cut(s)	161, 2183
BmsI	GCATC	5 cut(s)	303, 610, 2272, 2302, 2356
BmuI	ACTGGG	2 cut(s)	161, 2183
BpiI	GAAGAC	2 cut(s)	1440, 1613
BpmI	CTGGAG	1 cut(s)	408
BpuEI	CTTGAG	1 cut(s)	2086
Bsa29I	ATCGAT	1 cut(s)	2042
BsaBI	GATNNNNATC	1 cut(s)	2205
BsaI	GGTCTC	1 cut(s)	1079
BsaJI	CCNNGG	1 cut(s)	1309
BsaWI	WCCGGW	1 cut(s)	2287
BsaXI	ACNNNNNCTCC	2 cut(s)	396, 426
Bsc4I	CCNNNNNNNGG	5 cut(s)	172, 337, 1108, 1360, 1901
Bse118I	RCCGGY	1 cut(s)	188
Bse1I	ACTGG	6 cut(s)	167, 238, 425, 1293, 1371, 2189
Bse21I	CCTNAGG	2 cut(s)	126, 1477
Bse8I	GATNNNNATC	1 cut(s)	2205
BseAI	TCCGGA	1 cut(s)	2287
BseBI	CCWGG	2 cut(s)	1007, 1109
BseCI	ATCGAT	1 cut(s)	2042
BseDI	CCNNGG	1 cut(s)	1309
BseGI	GGATG	5 cut(s)	162, 929, 1375, 2140, 2348
BseJI	GATNNNNATC	1 cut(s)	2205
BseLI	CCNNNNNNNGG	5 cut(s)	172, 337, 1108, 1360, 1901
BseMII	CTCAG	9 cut(s)	117, 254, 1037, 1293, 1404, 1491, 1702, 1837, 1942
BseNI	ACTGG	6 cut(s)	167, 238, 425, 1293, 1371, 2189
BseRI	GAGGAG	3 cut(s)	1482, 1581, 1884
BseXI	GCAGC	3 cut(s)	475, 874, 1790
BseYI	CCCAGC	2 cut(s)	331, 912
Bsh1236I	CGCG	1 cut(s)	1215
BshFI	GGCC	2 cut(s)	188, 1475
BshNI	GGYRCC	1 cut(s)	1265
BshVI	ATCGAT	1 cut(s)	2042
BsiHKAI	GWGCWC	2 cut(s)	1346, 1419
BsiSI	CCGG	2 cut(s)	189, 2288
BslFI	GGGAC	1 cut(s)	2187
BslI	CCNNNNNNNGG	5 cut(s)	172, 337, 1108, 1360, 1901
BsmAI	GTCTC	3 cut(s)	456, 1079, 1185
BsmFI	GGGAC	1 cut(s)	2187
BsmI	GAATGC	3 cut(s)	229, 774, 1001
BsnI	GGCC	2 cut(s)	188, 1475
Bso31I	GGTCTC	1 cut(s)	1079
Bsp1286I	GDGCHC	2 cut(s)	1346, 1419
Bsp13I	TCCGGA	1 cut(s)	2287
Bsp1407I	TGTACA	1 cut(s)	1599
Bsp143I	GATC	7 cut(s)	294, 652, 822, 1146, 1680, 2206, 2284
BspACI	CCGC	4 cut(s)	1684, 1800, 1938, 1951
BspANI	GGCC	2 cut(s)	188, 1475
BspCNI	CTCAG	9 cut(s)	118, 253, 1036, 1294, 1405, 1490, 1701, 1836, 1941
BspDI	ATCGAT	1 cut(s)	2042
BspEI	TCCGGA	1 cut(s)	2287
BspFNI	CGCG	1 cut(s)	1215
BspLI	GGNNCC	2 cut(s)	123, 1267
BspMAI	CTGCAG	1 cut(s)	493
BspPI	GGATC	4 cut(s)	1154, 1675, 2201, 2279
BspT107I	GGYRCC	1 cut(s)	1265
BspTNI	GGTCTC	1 cut(s)	1079
BsrFI	RCCGGY	1 cut(s)	188
BsrGI	TGTACA	1 cut(s)	1599
BsrI	ACTGG	6 cut(s)	167, 238, 425, 1293, 1371, 2189
BssAI	RCCGGY	1 cut(s)	188
BssECI	CCNNGG	1 cut(s)	1309
BssMI	GATC	7 cut(s)	294, 652, 822, 1146, 1680, 2206, 2284
BssSI	CACGAG	1 cut(s)	1539
BssT1I	CCWWGG	1 cut(s)	1309
Bst2BI	CACGAG	1 cut(s)	1539
Bst2UI	CCWGG	2 cut(s)	1007, 1109
Bst4CI	ACNGT	4 cut(s)	880, 947, 1789, 1844
Bst6I	CTCTTC	2 cut(s)	1500, 2067
BstAUI	TGTACA	1 cut(s)	1599
BstC8I	GCNNGC	2 cut(s)	229, 1213
BstENI	CCTNNNNNAGG	1 cut(s)	1358
BstF5I	GGATG	5 cut(s)	162, 929, 1375, 2140, 2348
BstFNI	CGCG	1 cut(s)	1215
BstH2I	RGCGCY	1 cut(s)	489
BstHHI	GCGC	1 cut(s)	488
BstKTI	GATC	7 cut(s)	297, 655, 825, 1149, 1683, 2209, 2287
BstMAI	GTCTC	3 cut(s)	456, 1079, 1185
BstMBI	GATC	7 cut(s)	294, 652, 822, 1146, 1680, 2206, 2284
BstMWI	GCNNNNNNNGC	3 cut(s)	1350, 2120, 2150
BstNI	CCWGG	2 cut(s)	1007, 1109
BstSCI	CCNGG	2 cut(s)	1005, 1107
BstSFI	CTRYAG	4 cut(s)	132, 489, 1178, 1278
BstUI	CGCG	1 cut(s)	1215
BstV1I	GCAGC	3 cut(s)	475, 874, 1790
BstV2I	GAAGAC	2 cut(s)	1440, 1613
BstX2I	RGATCY	1 cut(s)	1146
BstXI	CCANNNNNNTGG	1 cut(s)	1316
BstYI	RGATCY	1 cut(s)	1146
Bsu15I	ATCGAT	1 cut(s)	2042
Bsu36I	CCTNAGG	2 cut(s)	126, 1477
BsuRI	GGCC	2 cut(s)	188, 1475
BsuTUI	ATCGAT	1 cut(s)	2042
BtgZI	GCGATG	1 cut(s)	1230
BtsCI	GGATG	5 cut(s)	162, 929, 1375, 2140, 2348
BtsI	GCAGTG	1 cut(s)	1977
BtsIMutI	CAGTG	9 cut(s)	231, 304, 437, 807, 876, 1696, 1785, 1977, 2196
Cac8I	GCNNGC	2 cut(s)	229, 1213
CfoI	GCGC	1 cut(s)	488
Cfr10I	RCCGGY	1 cut(s)	188
Cfr13I	GGNCC	2 cut(s)	419, 2048
ClaI	ATCGAT	1 cut(s)	2042
CseI	GACGC	1 cut(s)	1921
Csp6I	GTAC	9 cut(s)	748, 1036, 1172, 1201, 1516, 1527, 1600, 1765, 2219
CviAII	CATG	8 cut(s)	101, 209, 538, 728, 742, 1117, 2124, 2161
CviQI	GTAC	9 cut(s)	748, 1036, 1172, 1201, 1516, 1527, 1600, 1765, 2219
DpnI	GATC	7 cut(s)	296, 654, 824, 1148, 1682, 2208, 2286
DpnII	GATC	7 cut(s)	294, 652, 822, 1146, 1680, 2206, 2284
DraIII	CACNNNGTG	1 cut(s)	1921
DriI	GACNNNNNGTC	1 cut(s)	2180
EaeI	YGGCCR	1 cut(s)	186
Eam1104I	CTCTTC	2 cut(s)	1500, 2067
Eam1105I	GACNNNNNGTC	1 cut(s)	2180
EarI	CTCTTC	2 cut(s)	1500, 2067
EciI	GGCGGA	1 cut(s)	1673
Ecl136II	GAGCTC	2 cut(s)	1344, 1417
Eco130I	CCWWGG	1 cut(s)	1309
Eco24I	GRGCYC	2 cut(s)	1346, 1419
Eco31I	GGTCTC	1 cut(s)	1079
Eco47I	GGWCC	2 cut(s)	419, 2048
Eco53kI	GAGCTC	2 cut(s)	1344, 1417
Eco57I	CTGAAG	1 cut(s)	1836
Eco81I	CCTNAGG	2 cut(s)	126, 1477
EcoICRI	GAGCTC	2 cut(s)	1344, 1417
EcoNI	CCTNNNNNAGG	1 cut(s)	1358
EcoRII	CCWGG	2 cut(s)	1005, 1107
EcoT14I	CCWWGG	1 cut(s)	1309
EcoT22I	ATGCAT	2 cut(s)	625, 2162
EcoT38I	GRGCYC	2 cut(s)	1346, 1419
ErhI	CCWWGG	1 cut(s)	1309
FaeI	CATG	8 cut(s)	104, 212, 541, 731, 745, 1120, 2127, 2164
FalI	AAGNNNNNCTT	6 cut(s)	1158, 1190, 1190, 1222, 2301, 2333
FaqI	GGGAC	1 cut(s)	2187
FatI	CATG	8 cut(s)	100, 208, 537, 727, 741, 1116, 2123, 2160
FauI	CCCGC	2 cut(s)	1931, 1958
FauNDI	CATATG	3 cut(s)	456, 667, 1032
FblI	GTMKAC	3 cut(s)	203, 216, 1506
Fnu4HI	GCNGC	4 cut(s)	489, 863, 1801, 1804
FokI	GGATG	5 cut(s)	149, 916, 1382, 2147, 2355
FriOI	GRGCYC	2 cut(s)	1346, 1419
Fsp4HI	GCNGC	4 cut(s)	489, 863, 1801, 1804
FspBI	CTAG	6 cut(s)	257, 692, 779, 848, 1464, 1715
GlaI	GCGC	1 cut(s)	487
GluI	GCNGC	4 cut(s)	489, 863, 1801, 1804
GsaI	CCCAGC	2 cut(s)	335, 916
GsuI	CTGGAG	1 cut(s)	408
HaeII	RGCGCY	1 cut(s)	489
HaeIII	GGCC	2 cut(s)	188, 1475
HapII	CCGG	2 cut(s)	189, 2288
HgaI	GACGC	1 cut(s)	1921
HhaI	GCGC	1 cut(s)	488
Hin1II	CATG	8 cut(s)	104, 212, 541, 731, 745, 1120, 2127, 2164
Hin6I	GCGC	1 cut(s)	486
HinP1I	GCGC	1 cut(s)	486
HincII	GTYRAC	1 cut(s)	85
HindII	GTYRAC	1 cut(s)	85
HpaI	GTTAAC	1 cut(s)	85
HpaII	CCGG	2 cut(s)	189, 2288
HphI	GGTGA	2 cut(s)	727, 1849
Hpy166II	GTNNAC	9 cut(s)	85, 204, 217, 254, 535, 568, 735, 1507, 1600
Hpy188I	TCNGA	9 cut(s)	243, 267, 478, 652, 1303, 1414, 1621, 1826, 2259
Hpy188III	TCNNGA	6 cut(s)	1479, 1541, 2059, 2079, 2288, 2340
Hpy8I	GTNNAC	9 cut(s)	85, 204, 217, 254, 535, 568, 735, 1507, 1600
HpyAV	CCTTC	6 cut(s)	943, 1087, 1555, 1860, 1887, 2293
HpyCH4III	ACNGT	4 cut(s)	880, 947, 1789, 1844
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1350, 2120, 2150
Hsp92II	CATG	8 cut(s)	104, 212, 541, 731, 745, 1120, 2127, 2164
HspAI	GCGC	1 cut(s)	486
Kpn2I	TCCGGA	1 cut(s)	2287
KspAI	GTTAAC	1 cut(s)	85
Kzo9I	GATC	7 cut(s)	294, 652, 822, 1146, 1680, 2206, 2284
LmnI	GCTCC	3 cut(s)	121, 1220, 1422
Lsp1109I	GCAGC	3 cut(s)	475, 874, 1790
LweI	GCATC	5 cut(s)	303, 610, 2272, 2302, 2356
MaeI	CTAG	6 cut(s)	257, 692, 779, 848, 1464, 1715
MaeIII	GTNAC	5 cut(s)	299, 1273, 1372, 1466, 1855
MalI	GATC	7 cut(s)	296, 654, 824, 1148, 1682, 2208, 2286
MboI	GATC	7 cut(s)	294, 652, 822, 1146, 1680, 2206, 2284
MfeI	CAATTG	3 cut(s)	903, 994, 2067
MflI	RGATCY	1 cut(s)	1146
MhlI	GDGCHC	2 cut(s)	1346, 1419
MlyI	GAGTC	3 cut(s)	209, 1403, 2084
MmeI	TCCRAC	2 cut(s)	124, 1168
Mph1103I	ATGCAT	2 cut(s)	625, 2162
MroI	TCCGGA	1 cut(s)	2287
MroXI	GAANNNNTTC	3 cut(s)	324, 564, 1173
MseI	TTAA	6 cut(s)	84, 528, 611, 957, 1359, 1743
MslI	CAYNNNNRTG	1 cut(s)	740
MspA1I	CMGCKG	1 cut(s)	1938
MspI	CCGG	2 cut(s)	189, 2288
MspR9I	CCNGG	2 cut(s)	1007, 1109
MunI	CAATTG	3 cut(s)	903, 994, 2067
Mva1269I	GAATGC	3 cut(s)	229, 774, 1001
MvaI	CCWGG	2 cut(s)	1007, 1109
MvnI	CGCG	1 cut(s)	1215
MwoI	GCNNNNNNNGC	3 cut(s)	1350, 2120, 2150
NdeI	CATATG	3 cut(s)	456, 667, 1032
NdeII	GATC	7 cut(s)	294, 652, 822, 1146, 1680, 2206, 2284
NlaIII	CATG	8 cut(s)	104, 212, 541, 731, 745, 1120, 2127, 2164
NlaIV	GGNNCC	2 cut(s)	123, 1267
NmuCI	GTSAC	3 cut(s)	299, 1273, 1855
NsiI	ATGCAT	2 cut(s)	625, 2162
PcsI	WCGNNNNNNNCGW	1 cut(s)	2211
PctI	GAATGC	3 cut(s)	229, 774, 1001
PdmI	GAANNNNTTC	3 cut(s)	324, 564, 1173
PfeI	GAWTC	7 cut(s)	647, 674, 1230, 1292, 1544, 2039, 2117
PfoI	TCCNGGA	2 cut(s)	1005, 1107
PkrI	GCNGC	4 cut(s)	490, 864, 1802, 1805
PleI	GAGTC	3 cut(s)	208, 1403, 2083
PpsI	GAGTC	3 cut(s)	208, 1403, 2083
PsiI	TTATAA	1 cut(s)	887
Psp124BI	GAGCTC	2 cut(s)	1346, 1419
Psp6I	CCWGG	2 cut(s)	1005, 1107
PspFI	CCCAGC	2 cut(s)	331, 912
PspGI	CCWGG	2 cut(s)	1005, 1107
PspN4I	GGNNCC	2 cut(s)	123, 1267
PspPI	GGNCC	2 cut(s)	419, 2048
PsrI	GAACNNNNNNTAC	2 cut(s)	1757, 1789
PstI	CTGCAG	1 cut(s)	493
PsuI	RGATCY	1 cut(s)	1146
RsaI	GTAC	9 cut(s)	749, 1037, 1173, 1202, 1517, 1528, 1601, 1766, 2220
RsaNI	GTAC	9 cut(s)	748, 1036, 1172, 1201, 1516, 1527, 1600, 1765, 2219
RseI	CAYNNNNRTG	1 cut(s)	740
SacI	GAGCTC	2 cut(s)	1346, 1419
SaqAI	TTAA	6 cut(s)	84, 528, 611, 957, 1359, 1743
SatI	GCNGC	4 cut(s)	489, 863, 1801, 1804
Sau3AI	GATC	7 cut(s)	294, 652, 822, 1146, 1680, 2206, 2284
Sau96I	GGNCC	2 cut(s)	419, 2048
ScaI	AGTACT	2 cut(s)	1173, 1202
SchI	GAGTC	3 cut(s)	209, 1403, 2084
ScrFI	CCNGG	2 cut(s)	1007, 1109
SduI	GDGCHC	2 cut(s)	1346, 1419
SfaNI	GCATC	5 cut(s)	303, 610, 2272, 2302, 2356
SfcI	CTRYAG	4 cut(s)	132, 489, 1178, 1278
SinI	GGWCC	2 cut(s)	419, 2048
SmiMI	CAYNNNNRTG	1 cut(s)	740
SmlI	CTYRAG	1 cut(s)	2101
SmoI	CTYRAG	1 cut(s)	2101
SpeI	ACTAGT	1 cut(s)	1714
SsiI	CCGC	4 cut(s)	1684, 1800, 1938, 1951
SspI	AATATT	1 cut(s)	400
SspMI	CTAG	6 cut(s)	257, 692, 779, 848, 1464, 1715
SstI	GAGCTC	2 cut(s)	1346, 1419
StyD4I	CCNGG	2 cut(s)	1005, 1107
StyI	CCWWGG	1 cut(s)	1309
TaaI	ACNGT	4 cut(s)	880, 947, 1789, 1844
TaqI	TCGA	5 cut(s)	834, 984, 1679, 2042, 2205
TaqII	GACCGA	1 cut(s)	407
TatI	WGTACW	5 cut(s)	1171, 1200, 1515, 1599, 1764
TauI	GCSGC	1 cut(s)	1803
TfiI	GAWTC	7 cut(s)	647, 674, 1230, 1292, 1544, 2039, 2117
Tru1I	TTAA	6 cut(s)	84, 528, 611, 957, 1359, 1743
Tru9I	TTAA	6 cut(s)	84, 528, 611, 957, 1359, 1743
TscAI	CASTG	9 cut(s)	238, 304, 444, 814, 883, 1696, 1792, 1984, 2196
TseFI	GTSAC	3 cut(s)	299, 1273, 1855
TseI	GCWGC	3 cut(s)	488, 862, 1803
Tsp45I	GTSAC	3 cut(s)	299, 1273, 1855
TspDTI	ATGAA	7 cut(s)	36, 57, 654, 925, 1037, 2034, 2177
TspGWI	ACGGA	2 cut(s)	1454, 2236
TspRI	CASTG	9 cut(s)	238, 304, 444, 814, 883, 1696, 1792, 1984, 2196
VpaK11BI	GGWCC	2 cut(s)	419, 2048
XagI	CCTNNNNNAGG	1 cut(s)	1358
XapI	RAATTY	3 cut(s)	181, 584, 1957
XmiI	GTMKAC	3 cut(s)	203, 216, 1506
XmnI	GAANNNNTTC	3 cut(s)	324, 564, 1173
XspI	CTAG	6 cut(s)	257, 692, 779, 848, 1464, 1715
ZrmI	AGTACT	2 cut(s)	1173, 1202
Zsp2I	ATGCAT	2 cut(s)	625, 2162

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.